Multiple sequence alignment - TraesCS5B01G414600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G414600 chr5B 100.000 3358 0 0 1 3358 588912742 588916099 0.000000e+00 6202.0
1 TraesCS5B01G414600 chr5B 89.715 1439 101 27 994 2421 588920935 588922337 0.000000e+00 1794.0
2 TraesCS5B01G414600 chr5B 80.620 774 117 20 1330 2081 588882575 588883337 4.860000e-158 568.0
3 TraesCS5B01G414600 chr5B 83.165 297 47 3 994 1290 588882276 588882569 5.520000e-68 268.0
4 TraesCS5B01G414600 chr5B 91.935 186 14 1 2422 2607 429305096 429305280 3.320000e-65 259.0
5 TraesCS5B01G414600 chr3A 100.000 994 0 0 1 994 507818586 507817593 0.000000e+00 1836.0
6 TraesCS5B01G414600 chr3A 88.587 184 16 5 2422 2604 581610800 581610979 5.640000e-53 219.0
7 TraesCS5B01G414600 chr2A 100.000 994 0 0 1 994 729066570 729065577 0.000000e+00 1836.0
8 TraesCS5B01G414600 chr2A 84.211 57 9 0 2144 2200 143373330 143373386 4.680000e-04 56.5
9 TraesCS5B01G414600 chr5D 88.097 1445 128 25 994 2421 480555367 480556784 0.000000e+00 1676.0
10 TraesCS5B01G414600 chr5D 84.155 1319 148 31 994 2302 480499807 480501074 0.000000e+00 1221.0
11 TraesCS5B01G414600 chr6B 96.108 1002 28 6 1 994 59544032 59545030 0.000000e+00 1624.0
12 TraesCS5B01G414600 chr6B 99.160 119 1 0 3240 3358 311376974 311376856 7.300000e-52 215.0
13 TraesCS5B01G414600 chr6B 86.022 186 25 1 2420 2604 462154640 462154825 7.350000e-47 198.0
14 TraesCS5B01G414600 chr6B 85.484 186 23 4 2422 2604 719679386 719679202 1.230000e-44 191.0
15 TraesCS5B01G414600 chr2B 96.108 1002 21 7 1 994 133845896 133844905 0.000000e+00 1618.0
16 TraesCS5B01G414600 chr2B 98.427 572 9 0 1 572 773080070 773080641 0.000000e+00 1007.0
17 TraesCS5B01G414600 chr2B 100.000 431 0 0 564 994 773080710 773081140 0.000000e+00 797.0
18 TraesCS5B01G414600 chr2B 89.130 184 17 3 2422 2604 742166884 742166703 3.370000e-55 226.0
19 TraesCS5B01G414600 chr2B 99.160 119 1 0 3240 3358 234523068 234523186 7.300000e-52 215.0
20 TraesCS5B01G414600 chr2B 99.160 119 1 0 3240 3358 449182123 449182241 7.300000e-52 215.0
21 TraesCS5B01G414600 chr2B 86.517 178 21 3 2423 2600 738136572 738136746 3.420000e-45 193.0
22 TraesCS5B01G414600 chr5A 94.778 1015 40 3 1823 2836 599643996 599644998 0.000000e+00 1568.0
23 TraesCS5B01G414600 chr5A 86.674 863 61 16 994 1831 599642981 599643814 0.000000e+00 907.0
24 TraesCS5B01G414600 chr5A 90.217 184 18 0 2421 2604 599465600 599465417 1.200000e-59 241.0
25 TraesCS5B01G414600 chr5A 99.160 119 1 0 3240 3358 420156168 420156050 7.300000e-52 215.0
26 TraesCS5B01G414600 chr5A 88.462 78 8 1 918 994 242799216 242799139 3.570000e-15 93.5
27 TraesCS5B01G414600 chr1A 91.552 580 43 4 6 579 30287478 30286899 0.000000e+00 795.0
28 TraesCS5B01G414600 chrUn 88.398 181 20 1 2422 2602 41850413 41850234 2.030000e-52 217.0
29 TraesCS5B01G414600 chrUn 99.160 119 1 0 3240 3358 312172202 312172320 7.300000e-52 215.0
30 TraesCS5B01G414600 chrUn 99.160 119 1 0 3240 3358 385941628 385941746 7.300000e-52 215.0
31 TraesCS5B01G414600 chrUn 99.160 119 1 0 3240 3358 389107883 389107765 7.300000e-52 215.0
32 TraesCS5B01G414600 chr3B 99.160 119 1 0 3240 3358 5992720 5992838 7.300000e-52 215.0
33 TraesCS5B01G414600 chr3B 99.160 119 1 0 3240 3358 92278943 92279061 7.300000e-52 215.0
34 TraesCS5B01G414600 chr6D 88.312 77 8 1 919 994 19568545 19568621 1.280000e-14 91.6
35 TraesCS5B01G414600 chr6A 93.103 58 3 1 938 995 7087459 7087403 2.150000e-12 84.2
36 TraesCS5B01G414600 chr3D 93.103 58 2 2 937 994 136482157 136482212 2.150000e-12 84.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G414600 chr5B 588912742 588916099 3357 False 6202.0 6202 100.0000 1 3358 1 chr5B.!!$F2 3357
1 TraesCS5B01G414600 chr5B 588920935 588922337 1402 False 1794.0 1794 89.7150 994 2421 1 chr5B.!!$F3 1427
2 TraesCS5B01G414600 chr5B 588882276 588883337 1061 False 418.0 568 81.8925 994 2081 2 chr5B.!!$F4 1087
3 TraesCS5B01G414600 chr3A 507817593 507818586 993 True 1836.0 1836 100.0000 1 994 1 chr3A.!!$R1 993
4 TraesCS5B01G414600 chr2A 729065577 729066570 993 True 1836.0 1836 100.0000 1 994 1 chr2A.!!$R1 993
5 TraesCS5B01G414600 chr5D 480555367 480556784 1417 False 1676.0 1676 88.0970 994 2421 1 chr5D.!!$F2 1427
6 TraesCS5B01G414600 chr5D 480499807 480501074 1267 False 1221.0 1221 84.1550 994 2302 1 chr5D.!!$F1 1308
7 TraesCS5B01G414600 chr6B 59544032 59545030 998 False 1624.0 1624 96.1080 1 994 1 chr6B.!!$F1 993
8 TraesCS5B01G414600 chr2B 133844905 133845896 991 True 1618.0 1618 96.1080 1 994 1 chr2B.!!$R1 993
9 TraesCS5B01G414600 chr2B 773080070 773081140 1070 False 902.0 1007 99.2135 1 994 2 chr2B.!!$F4 993
10 TraesCS5B01G414600 chr5A 599642981 599644998 2017 False 1237.5 1568 90.7260 994 2836 2 chr5A.!!$F1 1842
11 TraesCS5B01G414600 chr1A 30286899 30287478 579 True 795.0 795 91.5520 6 579 1 chr1A.!!$R1 573

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1430 1531 1.192534 CGTCGACTTTGTGAGAAAGGC 59.807 52.381 14.7 2.18 32.0 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2855 3221 0.032615 AACAAACAGGGCCCAAGTCA 60.033 50.0 27.56 0.0 0.0 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1430 1531 1.192534 CGTCGACTTTGTGAGAAAGGC 59.807 52.381 14.70 2.18 32.00 4.35
1443 1544 5.482526 TGTGAGAAAGGCCAGTACAATACTA 59.517 40.000 5.01 0.00 37.23 1.82
1444 1545 6.014070 TGTGAGAAAGGCCAGTACAATACTAA 60.014 38.462 5.01 0.00 37.23 2.24
1445 1546 6.877322 GTGAGAAAGGCCAGTACAATACTAAA 59.123 38.462 5.01 0.00 37.23 1.85
1446 1547 7.553044 GTGAGAAAGGCCAGTACAATACTAAAT 59.447 37.037 5.01 0.00 37.23 1.40
1447 1548 8.764558 TGAGAAAGGCCAGTACAATACTAAATA 58.235 33.333 5.01 0.00 37.23 1.40
1448 1549 8.959705 AGAAAGGCCAGTACAATACTAAATAC 57.040 34.615 5.01 0.00 37.23 1.89
1449 1550 8.769359 AGAAAGGCCAGTACAATACTAAATACT 58.231 33.333 5.01 0.00 37.23 2.12
1450 1551 9.392259 GAAAGGCCAGTACAATACTAAATACTT 57.608 33.333 5.01 0.00 37.23 2.24
1523 1655 9.377312 CTTTTGATTTCAAGTTTTAACCCTGAA 57.623 29.630 4.50 4.50 37.15 3.02
1674 1816 3.278574 GTGCTTACCAATGCCATCTACA 58.721 45.455 0.00 0.00 0.00 2.74
1722 1864 1.961277 AAGAGCCGCACCAAAGACG 60.961 57.895 0.00 0.00 0.00 4.18
2027 2383 3.135530 AGTTCAAGCTGTCCTTCTTCTGT 59.864 43.478 0.00 0.00 0.00 3.41
2153 2509 0.981183 TGCGGGTAGAGGATGTGTTT 59.019 50.000 0.00 0.00 0.00 2.83
2294 2653 5.829924 CCATCCATTTGCCTTCTACATAGTT 59.170 40.000 0.00 0.00 0.00 2.24
2310 2669 1.004918 GTTGAGGAGGTGTCCCGTG 60.005 63.158 0.00 0.00 45.26 4.94
2356 2718 1.797025 GACCCTTCTGAAACCGAGTG 58.203 55.000 0.00 0.00 0.00 3.51
2357 2719 1.343465 GACCCTTCTGAAACCGAGTGA 59.657 52.381 0.00 0.00 0.00 3.41
2358 2720 1.978580 ACCCTTCTGAAACCGAGTGAT 59.021 47.619 0.00 0.00 0.00 3.06
2389 2751 7.696035 GCTATCATGTGTCGAAGATAGATACAG 59.304 40.741 17.20 4.95 41.66 2.74
2437 2802 4.063998 TCTACCAGCAATGCTACATCTG 57.936 45.455 7.70 0.00 36.40 2.90
2438 2803 1.386533 ACCAGCAATGCTACATCTGC 58.613 50.000 7.70 6.62 36.40 4.26
2439 2804 1.340308 ACCAGCAATGCTACATCTGCA 60.340 47.619 7.70 0.00 44.95 4.41
2440 2805 1.333931 CCAGCAATGCTACATCTGCAG 59.666 52.381 7.70 7.63 44.04 4.41
2441 2806 2.014857 CAGCAATGCTACATCTGCAGT 58.985 47.619 14.67 0.00 44.04 4.40
2444 2809 2.795231 AATGCTACATCTGCAGTGGT 57.205 45.000 14.67 15.07 44.04 4.16
2445 2810 2.795231 ATGCTACATCTGCAGTGGTT 57.205 45.000 14.67 0.00 44.04 3.67
2446 2811 2.566833 TGCTACATCTGCAGTGGTTT 57.433 45.000 14.67 0.00 35.31 3.27
2447 2812 2.862541 TGCTACATCTGCAGTGGTTTT 58.137 42.857 14.67 0.00 35.31 2.43
2468 2833 1.553704 ACAGGAGTTTTACGGGCTAGG 59.446 52.381 0.00 0.00 0.00 3.02
2478 2844 1.834378 CGGGCTAGGCTGAGATGGA 60.834 63.158 20.19 0.00 0.00 3.41
2483 2849 1.202510 GCTAGGCTGAGATGGAGTGTG 60.203 57.143 0.00 0.00 0.00 3.82
2505 2871 7.379529 GTGTGTTGATTGGTTGTTAAGATGAAG 59.620 37.037 0.00 0.00 0.00 3.02
2516 2882 2.124695 GATGAAGCGGGACCCACC 60.125 66.667 12.15 0.01 38.08 4.61
2527 2893 1.839424 GGACCCACCCTGAAAATCAG 58.161 55.000 0.32 0.32 43.91 2.90
2535 2901 3.755378 CACCCTGAAAATCAGAGTGGAAG 59.245 47.826 12.57 1.18 45.72 3.46
2536 2902 5.872383 CACCCTGAAAATCAGAGTGGAAGC 61.872 50.000 12.57 0.00 45.72 3.86
2547 2913 3.129462 CAGAGTGGAAGCGATTAGTGAGA 59.871 47.826 0.00 0.00 0.00 3.27
2576 2942 8.370182 AGAAGGTTAGTCCGTTAATTCTTGTAA 58.630 33.333 0.00 0.00 41.99 2.41
2584 2950 8.895737 AGTCCGTTAATTCTTGTAAAAGTTTCA 58.104 29.630 0.00 0.00 0.00 2.69
2585 2951 8.950961 GTCCGTTAATTCTTGTAAAAGTTTCAC 58.049 33.333 0.00 0.00 0.00 3.18
2664 3030 7.062749 AGACAAGACAACTATTAGTCCAACA 57.937 36.000 0.00 0.00 35.38 3.33
2683 3049 7.277981 GTCCAACATATTCGGATATATGGTCAC 59.722 40.741 19.78 12.28 40.97 3.67
2704 3070 8.345565 GGTCACGCTCTTTTCATCATAATATTT 58.654 33.333 0.00 0.00 0.00 1.40
2814 3180 2.806244 CGGGTGTTAGTTCTCTGGTTTG 59.194 50.000 0.00 0.00 0.00 2.93
2820 3186 6.147985 GGTGTTAGTTCTCTGGTTTGATCTTC 59.852 42.308 0.00 0.00 0.00 2.87
2832 3198 5.013495 TGGTTTGATCTTCATTCTCTCCACT 59.987 40.000 0.00 0.00 0.00 4.00
2836 3202 3.857549 TCTTCATTCTCTCCACTCACG 57.142 47.619 0.00 0.00 0.00 4.35
2837 3203 2.493675 TCTTCATTCTCTCCACTCACGG 59.506 50.000 0.00 0.00 0.00 4.94
2838 3204 1.924731 TCATTCTCTCCACTCACGGT 58.075 50.000 0.00 0.00 0.00 4.83
2839 3205 3.081710 TCATTCTCTCCACTCACGGTA 57.918 47.619 0.00 0.00 0.00 4.02
2840 3206 3.017442 TCATTCTCTCCACTCACGGTAG 58.983 50.000 0.00 0.00 0.00 3.18
2841 3207 2.873094 TTCTCTCCACTCACGGTAGA 57.127 50.000 0.00 0.00 0.00 2.59
2842 3208 2.110901 TCTCTCCACTCACGGTAGAC 57.889 55.000 0.00 0.00 0.00 2.59
2843 3209 1.350019 TCTCTCCACTCACGGTAGACA 59.650 52.381 0.00 0.00 0.00 3.41
2844 3210 1.740585 CTCTCCACTCACGGTAGACAG 59.259 57.143 0.00 0.00 0.00 3.51
2845 3211 1.350019 TCTCCACTCACGGTAGACAGA 59.650 52.381 0.00 0.00 0.00 3.41
2846 3212 2.160205 CTCCACTCACGGTAGACAGAA 58.840 52.381 0.00 0.00 0.00 3.02
2847 3213 2.557056 CTCCACTCACGGTAGACAGAAA 59.443 50.000 0.00 0.00 0.00 2.52
2848 3214 3.162666 TCCACTCACGGTAGACAGAAAT 58.837 45.455 0.00 0.00 0.00 2.17
2849 3215 3.192844 TCCACTCACGGTAGACAGAAATC 59.807 47.826 0.00 0.00 0.00 2.17
2850 3216 3.193691 CCACTCACGGTAGACAGAAATCT 59.806 47.826 0.00 0.00 0.00 2.40
2851 3217 4.416620 CACTCACGGTAGACAGAAATCTC 58.583 47.826 0.00 0.00 0.00 2.75
2852 3218 4.079970 ACTCACGGTAGACAGAAATCTCA 58.920 43.478 0.00 0.00 0.00 3.27
2853 3219 4.082679 ACTCACGGTAGACAGAAATCTCAC 60.083 45.833 0.00 0.00 0.00 3.51
2854 3220 3.119955 TCACGGTAGACAGAAATCTCACG 60.120 47.826 0.00 0.00 35.37 4.35
2855 3221 2.818432 ACGGTAGACAGAAATCTCACGT 59.182 45.455 0.00 0.00 36.77 4.49
2856 3222 3.172050 CGGTAGACAGAAATCTCACGTG 58.828 50.000 9.94 9.94 0.00 4.49
2857 3223 3.119955 CGGTAGACAGAAATCTCACGTGA 60.120 47.826 18.88 18.88 0.00 4.35
2858 3224 4.167268 GGTAGACAGAAATCTCACGTGAC 58.833 47.826 15.76 4.39 0.00 3.67
2859 3225 4.082679 GGTAGACAGAAATCTCACGTGACT 60.083 45.833 15.76 7.00 0.00 3.41
2860 3226 4.592485 AGACAGAAATCTCACGTGACTT 57.408 40.909 15.76 8.47 0.00 3.01
2861 3227 4.302455 AGACAGAAATCTCACGTGACTTG 58.698 43.478 15.76 5.45 0.00 3.16
2862 3228 3.393800 ACAGAAATCTCACGTGACTTGG 58.606 45.455 15.76 5.04 0.00 3.61
2863 3229 2.738846 CAGAAATCTCACGTGACTTGGG 59.261 50.000 15.76 4.62 0.00 4.12
2864 3230 1.464997 GAAATCTCACGTGACTTGGGC 59.535 52.381 15.76 0.00 0.00 5.36
2865 3231 0.321653 AATCTCACGTGACTTGGGCC 60.322 55.000 15.76 0.00 0.00 5.80
2866 3232 2.185310 ATCTCACGTGACTTGGGCCC 62.185 60.000 17.59 17.59 0.00 5.80
2867 3233 2.847234 TCACGTGACTTGGGCCCT 60.847 61.111 25.70 1.15 0.00 5.19
2868 3234 2.669569 CACGTGACTTGGGCCCTG 60.670 66.667 25.70 18.34 0.00 4.45
2869 3235 3.168528 ACGTGACTTGGGCCCTGT 61.169 61.111 25.70 21.68 0.00 4.00
2870 3236 2.113139 CGTGACTTGGGCCCTGTT 59.887 61.111 25.70 6.28 0.00 3.16
2871 3237 1.528309 CGTGACTTGGGCCCTGTTT 60.528 57.895 25.70 4.10 0.00 2.83
2872 3238 1.795170 CGTGACTTGGGCCCTGTTTG 61.795 60.000 25.70 10.73 0.00 2.93
2873 3239 0.755327 GTGACTTGGGCCCTGTTTGT 60.755 55.000 25.70 14.00 0.00 2.83
2874 3240 0.032615 TGACTTGGGCCCTGTTTGTT 60.033 50.000 25.70 0.00 0.00 2.83
2875 3241 1.119684 GACTTGGGCCCTGTTTGTTT 58.880 50.000 25.70 0.00 0.00 2.83
2876 3242 1.068588 GACTTGGGCCCTGTTTGTTTC 59.931 52.381 25.70 5.20 0.00 2.78
2877 3243 1.118838 CTTGGGCCCTGTTTGTTTCA 58.881 50.000 25.70 0.00 0.00 2.69
2878 3244 1.484240 CTTGGGCCCTGTTTGTTTCAA 59.516 47.619 25.70 3.20 0.00 2.69
2879 3245 0.827368 TGGGCCCTGTTTGTTTCAAC 59.173 50.000 25.70 0.00 0.00 3.18
2880 3246 1.119684 GGGCCCTGTTTGTTTCAACT 58.880 50.000 17.04 0.00 0.00 3.16
2881 3247 1.484653 GGGCCCTGTTTGTTTCAACTT 59.515 47.619 17.04 0.00 0.00 2.66
2882 3248 2.483013 GGGCCCTGTTTGTTTCAACTTC 60.483 50.000 17.04 0.00 0.00 3.01
2883 3249 2.167487 GGCCCTGTTTGTTTCAACTTCA 59.833 45.455 0.00 0.00 0.00 3.02
2884 3250 3.368948 GGCCCTGTTTGTTTCAACTTCAA 60.369 43.478 0.00 0.00 0.00 2.69
2885 3251 3.616821 GCCCTGTTTGTTTCAACTTCAAC 59.383 43.478 0.00 0.00 0.00 3.18
2886 3252 4.620567 GCCCTGTTTGTTTCAACTTCAACT 60.621 41.667 0.00 0.00 0.00 3.16
2887 3253 5.478407 CCCTGTTTGTTTCAACTTCAACTT 58.522 37.500 0.00 0.00 0.00 2.66
2888 3254 5.576774 CCCTGTTTGTTTCAACTTCAACTTC 59.423 40.000 0.00 0.00 0.00 3.01
2889 3255 6.155827 CCTGTTTGTTTCAACTTCAACTTCA 58.844 36.000 0.00 0.00 0.00 3.02
2890 3256 6.308766 CCTGTTTGTTTCAACTTCAACTTCAG 59.691 38.462 0.00 0.00 0.00 3.02
2891 3257 6.744112 TGTTTGTTTCAACTTCAACTTCAGT 58.256 32.000 0.00 0.00 0.00 3.41
2892 3258 7.206687 TGTTTGTTTCAACTTCAACTTCAGTT 58.793 30.769 0.00 0.00 39.12 3.16
2900 3266 4.800554 AACTTCAGTTGGCCTCGG 57.199 55.556 3.32 0.00 36.80 4.63
2901 3267 2.142220 AACTTCAGTTGGCCTCGGA 58.858 52.632 3.32 0.32 36.80 4.55
2902 3268 0.693049 AACTTCAGTTGGCCTCGGAT 59.307 50.000 3.32 0.00 36.80 4.18
2903 3269 0.250513 ACTTCAGTTGGCCTCGGATC 59.749 55.000 3.32 0.00 0.00 3.36
2904 3270 0.462759 CTTCAGTTGGCCTCGGATCC 60.463 60.000 3.32 0.00 0.00 3.36
2905 3271 1.910580 TTCAGTTGGCCTCGGATCCC 61.911 60.000 6.06 0.00 0.00 3.85
2916 3282 3.706055 CGGATCCCGTGGATTCATT 57.294 52.632 6.06 0.00 43.27 2.57
2917 3283 1.967319 CGGATCCCGTGGATTCATTT 58.033 50.000 6.06 0.00 43.27 2.32
2918 3284 1.873591 CGGATCCCGTGGATTCATTTC 59.126 52.381 6.06 0.00 43.27 2.17
2919 3285 2.744823 CGGATCCCGTGGATTCATTTCA 60.745 50.000 6.06 0.00 43.27 2.69
2920 3286 2.618709 GGATCCCGTGGATTCATTTCAC 59.381 50.000 0.00 0.00 43.27 3.18
2921 3287 2.122783 TCCCGTGGATTCATTTCACC 57.877 50.000 0.00 0.00 0.00 4.02
2922 3288 0.732571 CCCGTGGATTCATTTCACCG 59.267 55.000 0.00 0.00 0.00 4.94
2923 3289 0.732571 CCGTGGATTCATTTCACCGG 59.267 55.000 0.00 0.00 0.00 5.28
2924 3290 0.098728 CGTGGATTCATTTCACCGGC 59.901 55.000 0.00 0.00 0.00 6.13
2925 3291 1.173043 GTGGATTCATTTCACCGGCA 58.827 50.000 0.00 0.00 0.00 5.69
2926 3292 1.543802 GTGGATTCATTTCACCGGCAA 59.456 47.619 0.00 0.00 0.00 4.52
2927 3293 2.029470 GTGGATTCATTTCACCGGCAAA 60.029 45.455 0.00 0.42 0.00 3.68
2928 3294 2.630098 TGGATTCATTTCACCGGCAAAA 59.370 40.909 0.00 2.17 0.00 2.44
2929 3295 3.253230 GGATTCATTTCACCGGCAAAAG 58.747 45.455 0.00 0.00 0.00 2.27
2930 3296 3.306019 GGATTCATTTCACCGGCAAAAGT 60.306 43.478 0.00 0.00 0.00 2.66
2931 3297 2.791383 TCATTTCACCGGCAAAAGTG 57.209 45.000 0.00 0.42 35.24 3.16
2932 3298 2.302260 TCATTTCACCGGCAAAAGTGA 58.698 42.857 0.00 3.13 41.13 3.41
2933 3299 2.293122 TCATTTCACCGGCAAAAGTGAG 59.707 45.455 0.00 0.00 43.48 3.51
2934 3300 0.383949 TTTCACCGGCAAAAGTGAGC 59.616 50.000 0.00 0.00 43.48 4.26
2935 3301 0.465460 TTCACCGGCAAAAGTGAGCT 60.465 50.000 0.00 0.00 43.48 4.09
2936 3302 0.465460 TCACCGGCAAAAGTGAGCTT 60.465 50.000 0.00 0.00 38.07 3.74
2937 3303 0.385390 CACCGGCAAAAGTGAGCTTT 59.615 50.000 0.00 0.00 46.01 3.51
2938 3304 0.385390 ACCGGCAAAAGTGAGCTTTG 59.615 50.000 0.00 0.00 43.52 2.77
2939 3305 0.940991 CCGGCAAAAGTGAGCTTTGC 60.941 55.000 10.91 10.91 43.52 3.68
2940 3306 0.940991 CGGCAAAAGTGAGCTTTGCC 60.941 55.000 23.53 23.53 43.52 4.52
2941 3307 0.104671 GGCAAAAGTGAGCTTTGCCA 59.895 50.000 26.85 1.50 46.27 4.92
2942 3308 1.211743 GCAAAAGTGAGCTTTGCCAC 58.788 50.000 8.58 2.19 43.52 5.01
2943 3309 1.202452 GCAAAAGTGAGCTTTGCCACT 60.202 47.619 8.58 4.52 43.52 4.00
2944 3310 2.466846 CAAAAGTGAGCTTTGCCACTG 58.533 47.619 6.56 0.00 43.52 3.66
2945 3311 2.057137 AAAGTGAGCTTTGCCACTGA 57.943 45.000 6.56 0.00 42.78 3.41
2946 3312 2.057137 AAGTGAGCTTTGCCACTGAA 57.943 45.000 6.56 0.00 38.99 3.02
2947 3313 1.602311 AGTGAGCTTTGCCACTGAAG 58.398 50.000 5.07 0.00 38.15 3.02
2948 3314 1.133976 AGTGAGCTTTGCCACTGAAGT 60.134 47.619 5.07 0.00 38.15 3.01
2949 3315 2.104792 AGTGAGCTTTGCCACTGAAGTA 59.895 45.455 5.07 0.00 38.15 2.24
2950 3316 2.224314 GTGAGCTTTGCCACTGAAGTAC 59.776 50.000 0.00 0.00 30.89 2.73
2951 3317 2.158827 TGAGCTTTGCCACTGAAGTACA 60.159 45.455 0.00 0.00 0.00 2.90
2952 3318 2.222027 AGCTTTGCCACTGAAGTACAC 58.778 47.619 0.00 0.00 0.00 2.90
2953 3319 1.069906 GCTTTGCCACTGAAGTACACG 60.070 52.381 0.00 0.00 0.00 4.49
2954 3320 2.210116 CTTTGCCACTGAAGTACACGT 58.790 47.619 0.00 0.00 0.00 4.49
2955 3321 1.577468 TTGCCACTGAAGTACACGTG 58.423 50.000 15.48 15.48 0.00 4.49
2956 3322 0.878523 TGCCACTGAAGTACACGTGC 60.879 55.000 17.22 0.00 0.00 5.34
2957 3323 0.600255 GCCACTGAAGTACACGTGCT 60.600 55.000 17.22 2.06 0.00 4.40
2958 3324 1.865865 CCACTGAAGTACACGTGCTT 58.134 50.000 17.22 11.96 38.22 3.91
2965 3331 4.992381 GAAGTACACGTGCTTCAGAAAT 57.008 40.909 23.07 3.44 46.84 2.17
2966 3332 5.344207 GAAGTACACGTGCTTCAGAAATT 57.656 39.130 23.07 5.87 46.84 1.82
2967 3333 4.992381 AGTACACGTGCTTCAGAAATTC 57.008 40.909 17.22 0.00 0.00 2.17
2968 3334 3.746492 AGTACACGTGCTTCAGAAATTCC 59.254 43.478 17.22 0.00 0.00 3.01
2969 3335 2.571212 ACACGTGCTTCAGAAATTCCA 58.429 42.857 17.22 0.00 0.00 3.53
2970 3336 2.290641 ACACGTGCTTCAGAAATTCCAC 59.709 45.455 17.22 0.00 0.00 4.02
2971 3337 2.549754 CACGTGCTTCAGAAATTCCACT 59.450 45.455 0.82 0.00 0.00 4.00
2972 3338 2.549754 ACGTGCTTCAGAAATTCCACTG 59.450 45.455 0.00 0.00 35.72 3.66
2973 3339 2.807967 CGTGCTTCAGAAATTCCACTGA 59.192 45.455 0.00 0.00 40.66 3.41
2974 3340 3.250762 CGTGCTTCAGAAATTCCACTGAA 59.749 43.478 16.24 16.24 46.36 3.02
2980 3346 6.975196 TTCAGAAATTCCACTGAAAATGGA 57.025 33.333 15.39 0.00 45.83 3.41
2981 3347 7.543359 TTCAGAAATTCCACTGAAAATGGAT 57.457 32.000 15.39 0.00 45.71 3.41
2982 3348 7.543359 TCAGAAATTCCACTGAAAATGGATT 57.457 32.000 0.00 0.00 45.71 3.01
2983 3349 7.605449 TCAGAAATTCCACTGAAAATGGATTC 58.395 34.615 0.00 0.00 45.71 2.52
2984 3350 7.233144 TCAGAAATTCCACTGAAAATGGATTCA 59.767 33.333 9.08 0.00 45.71 2.57
2992 3358 5.640189 CTGAAAATGGATTCAGCTTCACT 57.360 39.130 4.31 0.00 46.88 3.41
2993 3359 5.399858 CTGAAAATGGATTCAGCTTCACTG 58.600 41.667 4.31 0.00 46.88 3.66
2994 3360 5.621555 CTGAAAATGGATTCAGCTTCACTGG 60.622 44.000 4.31 0.00 46.88 4.00
2995 3361 8.981714 CTGAAAATGGATTCAGCTTCACTGGC 62.982 46.154 4.31 0.00 46.88 4.85
3000 3366 4.959446 CAGCTTCACTGGCAAAGC 57.041 55.556 13.23 13.23 46.52 3.51
3005 3371 3.515330 GCTTCACTGGCAAAGCATATT 57.485 42.857 15.59 0.00 45.67 1.28
3006 3372 3.442100 GCTTCACTGGCAAAGCATATTC 58.558 45.455 15.59 0.00 45.67 1.75
3007 3373 3.736126 GCTTCACTGGCAAAGCATATTCC 60.736 47.826 15.59 0.00 45.67 3.01
3008 3374 3.084536 TCACTGGCAAAGCATATTCCA 57.915 42.857 0.00 0.00 0.00 3.53
3009 3375 2.754552 TCACTGGCAAAGCATATTCCAC 59.245 45.455 0.00 0.00 0.00 4.02
3010 3376 2.492881 CACTGGCAAAGCATATTCCACA 59.507 45.455 0.00 0.00 0.00 4.17
3011 3377 3.131577 CACTGGCAAAGCATATTCCACAT 59.868 43.478 0.00 0.00 0.00 3.21
3012 3378 4.338964 CACTGGCAAAGCATATTCCACATA 59.661 41.667 0.00 0.00 0.00 2.29
3013 3379 4.339247 ACTGGCAAAGCATATTCCACATAC 59.661 41.667 0.00 0.00 0.00 2.39
3014 3380 4.535781 TGGCAAAGCATATTCCACATACT 58.464 39.130 0.00 0.00 0.00 2.12
3015 3381 4.955450 TGGCAAAGCATATTCCACATACTT 59.045 37.500 0.00 0.00 0.00 2.24
3016 3382 5.421693 TGGCAAAGCATATTCCACATACTTT 59.578 36.000 0.00 0.00 0.00 2.66
3017 3383 5.750067 GGCAAAGCATATTCCACATACTTTG 59.250 40.000 7.93 7.93 43.22 2.77
3018 3384 6.332630 GCAAAGCATATTCCACATACTTTGT 58.667 36.000 12.52 0.00 42.65 2.83
3019 3385 6.813152 GCAAAGCATATTCCACATACTTTGTT 59.187 34.615 12.52 0.00 42.65 2.83
3020 3386 7.331687 GCAAAGCATATTCCACATACTTTGTTT 59.668 33.333 12.52 0.00 42.65 2.83
3021 3387 8.863049 CAAAGCATATTCCACATACTTTGTTTC 58.137 33.333 0.00 0.00 38.31 2.78
3022 3388 7.701539 AGCATATTCCACATACTTTGTTTCA 57.298 32.000 0.00 0.00 36.00 2.69
3023 3389 7.765307 AGCATATTCCACATACTTTGTTTCAG 58.235 34.615 0.00 0.00 36.00 3.02
3024 3390 6.473455 GCATATTCCACATACTTTGTTTCAGC 59.527 38.462 0.00 0.00 36.00 4.26
3025 3391 7.629222 GCATATTCCACATACTTTGTTTCAGCT 60.629 37.037 0.00 0.00 36.00 4.24
3026 3392 6.655078 ATTCCACATACTTTGTTTCAGCTT 57.345 33.333 0.00 0.00 36.00 3.74
3027 3393 5.689383 TCCACATACTTTGTTTCAGCTTC 57.311 39.130 0.00 0.00 36.00 3.86
3028 3394 5.376625 TCCACATACTTTGTTTCAGCTTCT 58.623 37.500 0.00 0.00 36.00 2.85
3029 3395 5.239306 TCCACATACTTTGTTTCAGCTTCTG 59.761 40.000 0.00 0.00 36.00 3.02
3030 3396 5.239306 CCACATACTTTGTTTCAGCTTCTGA 59.761 40.000 0.00 0.00 36.01 3.27
3031 3397 6.072286 CCACATACTTTGTTTCAGCTTCTGAT 60.072 38.462 0.00 0.00 37.06 2.90
3032 3398 7.365741 CACATACTTTGTTTCAGCTTCTGATT 58.634 34.615 0.00 0.00 37.06 2.57
3033 3399 7.864379 CACATACTTTGTTTCAGCTTCTGATTT 59.136 33.333 0.00 0.00 37.06 2.17
3034 3400 8.416329 ACATACTTTGTTTCAGCTTCTGATTTT 58.584 29.630 0.00 0.00 40.39 1.82
3035 3401 9.252962 CATACTTTGTTTCAGCTTCTGATTTTT 57.747 29.630 0.00 0.00 40.39 1.94
3062 3428 9.667107 TTCAACGAGGATCTGTTAATTAAATCT 57.333 29.630 0.00 0.00 32.34 2.40
3063 3429 9.098355 TCAACGAGGATCTGTTAATTAAATCTG 57.902 33.333 0.00 0.00 32.34 2.90
3064 3430 9.098355 CAACGAGGATCTGTTAATTAAATCTGA 57.902 33.333 0.00 0.00 32.34 3.27
3065 3431 9.838339 AACGAGGATCTGTTAATTAAATCTGAT 57.162 29.630 0.00 4.06 31.95 2.90
3066 3432 9.265901 ACGAGGATCTGTTAATTAAATCTGATG 57.734 33.333 0.00 0.00 0.00 3.07
3067 3433 9.481340 CGAGGATCTGTTAATTAAATCTGATGA 57.519 33.333 0.00 0.00 0.00 2.92
3079 3445 7.945033 TTAAATCTGATGAAACAAACAAGGC 57.055 32.000 0.00 0.00 0.00 4.35
3080 3446 4.525912 ATCTGATGAAACAAACAAGGCC 57.474 40.909 0.00 0.00 0.00 5.19
3081 3447 3.565307 TCTGATGAAACAAACAAGGCCT 58.435 40.909 0.00 0.00 0.00 5.19
3082 3448 3.960102 TCTGATGAAACAAACAAGGCCTT 59.040 39.130 13.78 13.78 0.00 4.35
3083 3449 5.136828 TCTGATGAAACAAACAAGGCCTTA 58.863 37.500 20.00 0.00 0.00 2.69
3084 3450 5.241506 TCTGATGAAACAAACAAGGCCTTAG 59.758 40.000 20.00 15.05 0.00 2.18
3085 3451 5.136828 TGATGAAACAAACAAGGCCTTAGA 58.863 37.500 20.00 0.00 0.00 2.10
3086 3452 5.774690 TGATGAAACAAACAAGGCCTTAGAT 59.225 36.000 20.00 3.69 0.00 1.98
3087 3453 5.452078 TGAAACAAACAAGGCCTTAGATG 57.548 39.130 20.00 18.40 0.00 2.90
3088 3454 4.280677 TGAAACAAACAAGGCCTTAGATGG 59.719 41.667 20.00 8.06 0.00 3.51
3089 3455 3.525800 ACAAACAAGGCCTTAGATGGT 57.474 42.857 20.00 8.82 0.00 3.55
3090 3456 3.421844 ACAAACAAGGCCTTAGATGGTC 58.578 45.455 20.00 0.00 0.00 4.02
3091 3457 3.074538 ACAAACAAGGCCTTAGATGGTCT 59.925 43.478 20.00 0.00 45.14 3.85
3097 3463 4.870021 AGGCCTTAGATGGTCTTCAATT 57.130 40.909 0.00 0.00 39.31 2.32
3098 3464 4.530875 AGGCCTTAGATGGTCTTCAATTG 58.469 43.478 0.00 0.00 39.31 2.32
3099 3465 4.228210 AGGCCTTAGATGGTCTTCAATTGA 59.772 41.667 0.00 3.38 39.31 2.57
3100 3466 4.336713 GGCCTTAGATGGTCTTCAATTGAC 59.663 45.833 7.89 0.00 0.00 3.18
3101 3467 4.943705 GCCTTAGATGGTCTTCAATTGACA 59.056 41.667 7.89 3.11 36.26 3.58
3102 3468 5.163713 GCCTTAGATGGTCTTCAATTGACAC 60.164 44.000 7.89 7.86 36.26 3.67
3103 3469 5.939883 CCTTAGATGGTCTTCAATTGACACA 59.060 40.000 7.89 5.40 36.26 3.72
3104 3470 6.093219 CCTTAGATGGTCTTCAATTGACACAG 59.907 42.308 7.89 3.32 36.26 3.66
3105 3471 4.978099 AGATGGTCTTCAATTGACACAGT 58.022 39.130 7.89 0.81 36.26 3.55
3106 3472 6.114187 AGATGGTCTTCAATTGACACAGTA 57.886 37.500 7.89 0.00 36.26 2.74
3107 3473 6.715280 AGATGGTCTTCAATTGACACAGTAT 58.285 36.000 7.89 4.32 36.26 2.12
3108 3474 7.851228 AGATGGTCTTCAATTGACACAGTATA 58.149 34.615 7.89 0.00 36.26 1.47
3109 3475 8.489489 AGATGGTCTTCAATTGACACAGTATAT 58.511 33.333 7.89 0.38 36.26 0.86
3110 3476 8.668510 ATGGTCTTCAATTGACACAGTATATC 57.331 34.615 7.89 0.00 36.26 1.63
3111 3477 7.851228 TGGTCTTCAATTGACACAGTATATCT 58.149 34.615 7.89 0.00 36.26 1.98
3112 3478 8.977412 TGGTCTTCAATTGACACAGTATATCTA 58.023 33.333 7.89 0.00 36.26 1.98
3113 3479 9.250624 GGTCTTCAATTGACACAGTATATCTAC 57.749 37.037 7.89 0.00 36.26 2.59
3126 3492 7.721286 CAGTATATCTACTGCCTTTCTTTGG 57.279 40.000 5.43 0.00 46.13 3.28
3127 3493 6.203723 CAGTATATCTACTGCCTTTCTTTGGC 59.796 42.308 5.43 0.00 46.13 4.52
3128 3494 7.903576 CAGTATATCTACTGCCTTTCTTTGGCT 60.904 40.741 5.43 0.00 46.13 4.75
3136 3502 4.166187 GCCTTTCTTTGGCTCACTTTAG 57.834 45.455 0.00 0.00 46.38 1.85
3137 3503 3.821033 GCCTTTCTTTGGCTCACTTTAGA 59.179 43.478 0.00 0.00 46.38 2.10
3138 3504 4.460731 GCCTTTCTTTGGCTCACTTTAGAT 59.539 41.667 0.00 0.00 46.38 1.98
3139 3505 5.392487 GCCTTTCTTTGGCTCACTTTAGATC 60.392 44.000 0.00 0.00 46.38 2.75
3140 3506 5.163814 CCTTTCTTTGGCTCACTTTAGATCG 60.164 44.000 0.00 0.00 0.00 3.69
3141 3507 3.861840 TCTTTGGCTCACTTTAGATCGG 58.138 45.455 0.00 0.00 0.00 4.18
3142 3508 3.260884 TCTTTGGCTCACTTTAGATCGGT 59.739 43.478 0.00 0.00 0.00 4.69
3143 3509 4.464951 TCTTTGGCTCACTTTAGATCGGTA 59.535 41.667 0.00 0.00 0.00 4.02
3144 3510 4.386867 TTGGCTCACTTTAGATCGGTAG 57.613 45.455 0.00 0.00 0.00 3.18
3145 3511 3.362706 TGGCTCACTTTAGATCGGTAGT 58.637 45.455 0.00 0.00 0.00 2.73
3146 3512 3.767673 TGGCTCACTTTAGATCGGTAGTT 59.232 43.478 0.00 0.00 0.00 2.24
3147 3513 4.951715 TGGCTCACTTTAGATCGGTAGTTA 59.048 41.667 0.00 0.00 0.00 2.24
3148 3514 5.419788 TGGCTCACTTTAGATCGGTAGTTAA 59.580 40.000 0.00 0.00 0.00 2.01
3149 3515 5.747675 GGCTCACTTTAGATCGGTAGTTAAC 59.252 44.000 0.00 0.00 0.00 2.01
3150 3516 6.405619 GGCTCACTTTAGATCGGTAGTTAACT 60.406 42.308 13.68 13.68 0.00 2.24
3151 3517 7.034397 GCTCACTTTAGATCGGTAGTTAACTT 58.966 38.462 14.49 0.00 0.00 2.66
3152 3518 7.544915 GCTCACTTTAGATCGGTAGTTAACTTT 59.455 37.037 14.49 0.00 0.00 2.66
3153 3519 9.420551 CTCACTTTAGATCGGTAGTTAACTTTT 57.579 33.333 14.49 0.00 0.00 2.27
3154 3520 9.415544 TCACTTTAGATCGGTAGTTAACTTTTC 57.584 33.333 14.49 5.14 0.00 2.29
3155 3521 9.199982 CACTTTAGATCGGTAGTTAACTTTTCA 57.800 33.333 14.49 0.00 0.00 2.69
3156 3522 9.201127 ACTTTAGATCGGTAGTTAACTTTTCAC 57.799 33.333 14.49 5.55 0.00 3.18
3157 3523 8.538409 TTTAGATCGGTAGTTAACTTTTCACC 57.462 34.615 14.49 13.77 0.00 4.02
3158 3524 6.105397 AGATCGGTAGTTAACTTTTCACCA 57.895 37.500 20.24 10.96 0.00 4.17
3159 3525 5.930569 AGATCGGTAGTTAACTTTTCACCAC 59.069 40.000 20.24 12.77 0.00 4.16
3160 3526 5.021033 TCGGTAGTTAACTTTTCACCACA 57.979 39.130 20.24 7.60 0.00 4.17
3161 3527 5.426504 TCGGTAGTTAACTTTTCACCACAA 58.573 37.500 20.24 6.89 0.00 3.33
3162 3528 6.056884 TCGGTAGTTAACTTTTCACCACAAT 58.943 36.000 20.24 0.00 0.00 2.71
3163 3529 7.215789 TCGGTAGTTAACTTTTCACCACAATA 58.784 34.615 20.24 3.08 0.00 1.90
3164 3530 7.879160 TCGGTAGTTAACTTTTCACCACAATAT 59.121 33.333 20.24 0.00 0.00 1.28
3165 3531 8.508875 CGGTAGTTAACTTTTCACCACAATATT 58.491 33.333 20.24 0.00 0.00 1.28
3166 3532 9.836076 GGTAGTTAACTTTTCACCACAATATTC 57.164 33.333 14.49 0.00 0.00 1.75
3191 3557 8.974408 TCATATAAATGATCTTACCGAAACACG 58.026 33.333 0.00 0.00 37.20 4.49
3204 3570 3.168193 CGAAACACGGATATTTTGTGCC 58.832 45.455 3.64 0.00 37.11 5.01
3205 3571 3.365465 CGAAACACGGATATTTTGTGCCA 60.365 43.478 3.64 0.00 37.11 4.92
3206 3572 4.674101 CGAAACACGGATATTTTGTGCCAT 60.674 41.667 3.64 0.00 37.11 4.40
3207 3573 4.799564 AACACGGATATTTTGTGCCATT 57.200 36.364 3.64 0.00 37.11 3.16
3208 3574 4.799564 ACACGGATATTTTGTGCCATTT 57.200 36.364 3.64 0.00 37.11 2.32
3209 3575 5.146010 ACACGGATATTTTGTGCCATTTT 57.854 34.783 3.64 0.00 37.11 1.82
3210 3576 5.546526 ACACGGATATTTTGTGCCATTTTT 58.453 33.333 3.64 0.00 37.11 1.94
3211 3577 6.692486 ACACGGATATTTTGTGCCATTTTTA 58.308 32.000 3.64 0.00 37.11 1.52
3212 3578 7.327214 ACACGGATATTTTGTGCCATTTTTAT 58.673 30.769 3.64 0.00 37.11 1.40
3213 3579 7.821846 ACACGGATATTTTGTGCCATTTTTATT 59.178 29.630 3.64 0.00 37.11 1.40
3214 3580 8.115520 CACGGATATTTTGTGCCATTTTTATTG 58.884 33.333 0.00 0.00 0.00 1.90
3215 3581 8.037758 ACGGATATTTTGTGCCATTTTTATTGA 58.962 29.630 0.00 0.00 0.00 2.57
3216 3582 8.542132 CGGATATTTTGTGCCATTTTTATTGAG 58.458 33.333 0.00 0.00 0.00 3.02
3217 3583 9.598517 GGATATTTTGTGCCATTTTTATTGAGA 57.401 29.630 0.00 0.00 0.00 3.27
3244 3610 6.811253 TTTTATGCATAAGTCGTTGAACCT 57.189 33.333 18.13 0.00 0.00 3.50
3245 3611 6.811253 TTTATGCATAAGTCGTTGAACCTT 57.189 33.333 18.13 0.00 0.00 3.50
3246 3612 4.946784 ATGCATAAGTCGTTGAACCTTC 57.053 40.909 0.00 0.00 0.00 3.46
3247 3613 4.002906 TGCATAAGTCGTTGAACCTTCT 57.997 40.909 0.00 0.00 0.00 2.85
3248 3614 3.994392 TGCATAAGTCGTTGAACCTTCTC 59.006 43.478 0.00 0.00 0.00 2.87
3249 3615 3.994392 GCATAAGTCGTTGAACCTTCTCA 59.006 43.478 0.00 0.00 0.00 3.27
3250 3616 4.451096 GCATAAGTCGTTGAACCTTCTCAA 59.549 41.667 0.00 0.00 32.89 3.02
3251 3617 5.049680 GCATAAGTCGTTGAACCTTCTCAAA 60.050 40.000 0.00 0.00 37.08 2.69
3252 3618 6.593978 CATAAGTCGTTGAACCTTCTCAAAG 58.406 40.000 0.00 0.00 37.08 2.77
3253 3619 4.402056 AGTCGTTGAACCTTCTCAAAGA 57.598 40.909 0.00 0.00 40.17 2.52
3255 3621 4.402056 TCGTTGAACCTTCTCAAAGACT 57.598 40.909 0.00 0.00 38.40 3.24
3256 3622 4.369182 TCGTTGAACCTTCTCAAAGACTC 58.631 43.478 0.00 0.00 38.40 3.36
3257 3623 3.495001 CGTTGAACCTTCTCAAAGACTCC 59.505 47.826 0.00 0.00 37.07 3.85
3258 3624 3.771577 TGAACCTTCTCAAAGACTCCC 57.228 47.619 0.00 0.00 34.14 4.30
3259 3625 3.318313 TGAACCTTCTCAAAGACTCCCT 58.682 45.455 0.00 0.00 34.14 4.20
3260 3626 3.716872 TGAACCTTCTCAAAGACTCCCTT 59.283 43.478 0.00 0.00 34.14 3.95
3261 3627 4.166144 TGAACCTTCTCAAAGACTCCCTTT 59.834 41.667 0.00 0.00 45.48 3.11
3269 3635 2.557920 AAGACTCCCTTTGCACTGAG 57.442 50.000 0.00 0.00 0.00 3.35
3270 3636 1.722034 AGACTCCCTTTGCACTGAGA 58.278 50.000 7.69 0.00 0.00 3.27
3271 3637 2.050144 AGACTCCCTTTGCACTGAGAA 58.950 47.619 7.69 0.00 0.00 2.87
3272 3638 2.147150 GACTCCCTTTGCACTGAGAAC 58.853 52.381 7.69 0.21 0.00 3.01
3273 3639 1.490490 ACTCCCTTTGCACTGAGAACA 59.510 47.619 7.69 0.00 0.00 3.18
3274 3640 1.876156 CTCCCTTTGCACTGAGAACAC 59.124 52.381 0.00 0.00 0.00 3.32
3275 3641 1.211703 TCCCTTTGCACTGAGAACACA 59.788 47.619 0.00 0.00 0.00 3.72
3276 3642 2.023673 CCCTTTGCACTGAGAACACAA 58.976 47.619 0.00 0.00 0.00 3.33
3277 3643 2.624838 CCCTTTGCACTGAGAACACAAT 59.375 45.455 0.00 0.00 0.00 2.71
3278 3644 3.068590 CCCTTTGCACTGAGAACACAATT 59.931 43.478 0.00 0.00 0.00 2.32
3279 3645 4.293415 CCTTTGCACTGAGAACACAATTC 58.707 43.478 0.00 0.00 0.00 2.17
3280 3646 4.202040 CCTTTGCACTGAGAACACAATTCA 60.202 41.667 0.00 0.00 0.00 2.57
3281 3647 4.556942 TTGCACTGAGAACACAATTCAG 57.443 40.909 0.00 0.00 43.04 3.02
3282 3648 3.807553 TGCACTGAGAACACAATTCAGA 58.192 40.909 7.64 0.00 40.54 3.27
3283 3649 3.811497 TGCACTGAGAACACAATTCAGAG 59.189 43.478 7.64 1.38 40.54 3.35
3284 3650 3.364764 GCACTGAGAACACAATTCAGAGC 60.365 47.826 7.64 7.42 44.15 4.09
3285 3651 3.188048 CACTGAGAACACAATTCAGAGCC 59.812 47.826 7.64 0.00 40.54 4.70
3286 3652 2.746362 CTGAGAACACAATTCAGAGCCC 59.254 50.000 0.00 0.00 40.54 5.19
3287 3653 2.373169 TGAGAACACAATTCAGAGCCCT 59.627 45.455 0.00 0.00 0.00 5.19
3288 3654 3.006247 GAGAACACAATTCAGAGCCCTC 58.994 50.000 0.00 0.00 0.00 4.30
3289 3655 2.087646 GAACACAATTCAGAGCCCTCC 58.912 52.381 0.00 0.00 0.00 4.30
3290 3656 1.366319 ACACAATTCAGAGCCCTCCT 58.634 50.000 0.00 0.00 0.00 3.69
3291 3657 1.707427 ACACAATTCAGAGCCCTCCTT 59.293 47.619 0.00 0.00 0.00 3.36
3292 3658 2.290577 ACACAATTCAGAGCCCTCCTTC 60.291 50.000 0.00 0.00 0.00 3.46
3293 3659 2.026449 CACAATTCAGAGCCCTCCTTCT 60.026 50.000 0.00 0.00 0.00 2.85
3294 3660 2.238395 ACAATTCAGAGCCCTCCTTCTC 59.762 50.000 0.00 0.00 0.00 2.87
3295 3661 2.238144 CAATTCAGAGCCCTCCTTCTCA 59.762 50.000 0.00 0.00 0.00 3.27
3296 3662 1.270907 TTCAGAGCCCTCCTTCTCAC 58.729 55.000 0.00 0.00 0.00 3.51
3297 3663 0.115152 TCAGAGCCCTCCTTCTCACA 59.885 55.000 0.00 0.00 0.00 3.58
3298 3664 0.979665 CAGAGCCCTCCTTCTCACAA 59.020 55.000 0.00 0.00 0.00 3.33
3299 3665 1.066286 CAGAGCCCTCCTTCTCACAAG 60.066 57.143 0.00 0.00 0.00 3.16
3300 3666 1.203237 AGAGCCCTCCTTCTCACAAGA 60.203 52.381 0.00 0.00 0.00 3.02
3301 3667 1.625818 GAGCCCTCCTTCTCACAAGAA 59.374 52.381 0.00 0.00 39.22 2.52
3322 3688 3.197434 GGCAAACCTTGTACGTTGATC 57.803 47.619 0.00 0.00 0.00 2.92
3323 3689 2.412325 GGCAAACCTTGTACGTTGATCG 60.412 50.000 0.00 0.00 46.00 3.69
3324 3690 2.477375 GCAAACCTTGTACGTTGATCGA 59.523 45.455 0.00 0.00 42.86 3.59
3325 3691 3.059461 GCAAACCTTGTACGTTGATCGAA 60.059 43.478 0.00 0.00 42.86 3.71
3326 3692 4.378046 GCAAACCTTGTACGTTGATCGAAT 60.378 41.667 0.00 0.00 42.86 3.34
3327 3693 5.313623 CAAACCTTGTACGTTGATCGAATC 58.686 41.667 0.00 0.00 42.86 2.52
3328 3694 4.451629 ACCTTGTACGTTGATCGAATCT 57.548 40.909 0.00 0.00 42.86 2.40
3329 3695 4.817517 ACCTTGTACGTTGATCGAATCTT 58.182 39.130 0.00 0.00 42.86 2.40
3330 3696 4.863131 ACCTTGTACGTTGATCGAATCTTC 59.137 41.667 0.00 0.00 42.86 2.87
3331 3697 5.103000 CCTTGTACGTTGATCGAATCTTCT 58.897 41.667 0.00 0.00 42.86 2.85
3332 3698 5.577164 CCTTGTACGTTGATCGAATCTTCTT 59.423 40.000 0.00 0.00 42.86 2.52
3333 3699 6.090898 CCTTGTACGTTGATCGAATCTTCTTT 59.909 38.462 0.00 0.00 42.86 2.52
3334 3700 6.627690 TGTACGTTGATCGAATCTTCTTTC 57.372 37.500 0.00 0.00 42.86 2.62
3336 3702 3.060895 ACGTTGATCGAATCTTCTTTCGC 59.939 43.478 0.00 0.00 46.14 4.70
3337 3703 3.060761 CGTTGATCGAATCTTCTTTCGCA 59.939 43.478 0.00 0.00 46.14 5.10
3338 3704 4.259970 CGTTGATCGAATCTTCTTTCGCAT 60.260 41.667 0.00 0.00 46.14 4.73
3339 3705 5.193936 GTTGATCGAATCTTCTTTCGCATC 58.806 41.667 0.00 6.82 46.14 3.91
3340 3706 3.804325 TGATCGAATCTTCTTTCGCATCC 59.196 43.478 0.00 0.00 46.14 3.51
3341 3707 3.245518 TCGAATCTTCTTTCGCATCCA 57.754 42.857 1.92 0.00 46.14 3.41
3342 3708 3.190079 TCGAATCTTCTTTCGCATCCAG 58.810 45.455 1.92 0.00 46.14 3.86
3343 3709 3.119137 TCGAATCTTCTTTCGCATCCAGA 60.119 43.478 1.92 0.00 46.14 3.86
3344 3710 3.618594 CGAATCTTCTTTCGCATCCAGAA 59.381 43.478 0.00 0.00 41.61 3.02
3345 3711 4.260132 CGAATCTTCTTTCGCATCCAGAAG 60.260 45.833 2.32 2.32 43.38 2.85
3346 3712 3.961480 TCTTCTTTCGCATCCAGAAGA 57.039 42.857 6.73 6.73 46.68 2.87
3347 3713 3.854666 TCTTCTTTCGCATCCAGAAGAG 58.145 45.455 6.73 0.00 44.92 2.85
3348 3714 3.511540 TCTTCTTTCGCATCCAGAAGAGA 59.488 43.478 6.73 0.00 44.92 3.10
3349 3715 3.516981 TCTTTCGCATCCAGAAGAGAG 57.483 47.619 0.00 0.00 0.00 3.20
3350 3716 2.167281 TCTTTCGCATCCAGAAGAGAGG 59.833 50.000 0.00 0.00 0.00 3.69
3351 3717 0.176680 TTCGCATCCAGAAGAGAGGC 59.823 55.000 0.00 0.00 37.67 4.70
3352 3718 0.685785 TCGCATCCAGAAGAGAGGCT 60.686 55.000 0.00 0.00 38.84 4.58
3353 3719 0.530211 CGCATCCAGAAGAGAGGCTG 60.530 60.000 0.00 0.00 38.84 4.85
3354 3720 0.540923 GCATCCAGAAGAGAGGCTGT 59.459 55.000 0.00 0.00 38.01 4.40
3355 3721 1.743091 GCATCCAGAAGAGAGGCTGTG 60.743 57.143 0.00 0.00 38.01 3.66
3356 3722 1.134461 CATCCAGAAGAGAGGCTGTGG 60.134 57.143 0.00 0.00 34.31 4.17
3357 3723 0.906756 TCCAGAAGAGAGGCTGTGGG 60.907 60.000 0.00 0.00 33.97 4.61
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1114 1215 1.138859 CATGATGTTCTGGCCCTCGTA 59.861 52.381 0.00 0.00 0.00 3.43
1443 1544 5.106948 CGATGGCATCGCTGAATAAGTATTT 60.107 40.000 33.67 0.00 46.55 1.40
1444 1545 4.389992 CGATGGCATCGCTGAATAAGTATT 59.610 41.667 33.67 0.00 46.55 1.89
1445 1546 3.928992 CGATGGCATCGCTGAATAAGTAT 59.071 43.478 33.67 0.00 46.55 2.12
1446 1547 3.317150 CGATGGCATCGCTGAATAAGTA 58.683 45.455 33.67 0.00 46.55 2.24
1447 1548 2.138320 CGATGGCATCGCTGAATAAGT 58.862 47.619 33.67 0.00 46.55 2.24
1448 1549 2.869358 CGATGGCATCGCTGAATAAG 57.131 50.000 33.67 7.82 46.55 1.73
1502 1624 6.731164 TCGTTCAGGGTTAAAACTTGAAATC 58.269 36.000 10.10 1.50 35.72 2.17
1514 1646 2.758979 GGAGACAGATCGTTCAGGGTTA 59.241 50.000 0.00 0.00 0.00 2.85
1523 1655 1.478631 TGCATCAGGAGACAGATCGT 58.521 50.000 0.00 0.00 33.83 3.73
1641 1783 1.005037 TAAGCACGAGCCTGGTGTG 60.005 57.895 8.69 10.27 43.56 3.82
1674 1816 1.075601 TTCTCCCACTTGCCCTTGAT 58.924 50.000 0.00 0.00 0.00 2.57
1722 1864 2.737376 GAGGCGGTGGAACGTGTC 60.737 66.667 0.00 0.00 38.12 3.67
1779 1929 1.445582 CCAGGTACTTGTCGCGTCC 60.446 63.158 5.77 0.00 34.60 4.79
2027 2383 5.644977 TCTCGAGAACTTTCTTCATGCTA 57.355 39.130 14.01 0.00 37.73 3.49
2153 2509 2.674563 CTTCCACAACCGCCCTGTGA 62.675 60.000 10.31 0.00 45.80 3.58
2294 2653 3.311110 GCACGGGACACCTCCTCA 61.311 66.667 0.00 0.00 36.68 3.86
2356 2718 7.700322 TCTTCGACACATGATAGCTTTTATC 57.300 36.000 0.00 0.00 0.00 1.75
2357 2719 9.416794 CTATCTTCGACACATGATAGCTTTTAT 57.583 33.333 0.00 0.00 34.24 1.40
2358 2720 8.630037 TCTATCTTCGACACATGATAGCTTTTA 58.370 33.333 0.00 0.00 38.61 1.52
2389 2751 4.881920 TGGTGCCAATTAAAAAGAGCTTC 58.118 39.130 0.00 0.00 0.00 3.86
2437 2802 4.649088 AAAACTCCTGTAAAACCACTGC 57.351 40.909 0.00 0.00 0.00 4.40
2438 2803 5.277634 CCGTAAAACTCCTGTAAAACCACTG 60.278 44.000 0.00 0.00 0.00 3.66
2439 2804 4.818005 CCGTAAAACTCCTGTAAAACCACT 59.182 41.667 0.00 0.00 0.00 4.00
2440 2805 4.023792 CCCGTAAAACTCCTGTAAAACCAC 60.024 45.833 0.00 0.00 0.00 4.16
2441 2806 4.136051 CCCGTAAAACTCCTGTAAAACCA 58.864 43.478 0.00 0.00 0.00 3.67
2442 2807 3.058016 GCCCGTAAAACTCCTGTAAAACC 60.058 47.826 0.00 0.00 0.00 3.27
2443 2808 3.817084 AGCCCGTAAAACTCCTGTAAAAC 59.183 43.478 0.00 0.00 0.00 2.43
2444 2809 4.089408 AGCCCGTAAAACTCCTGTAAAA 57.911 40.909 0.00 0.00 0.00 1.52
2445 2810 3.775261 AGCCCGTAAAACTCCTGTAAA 57.225 42.857 0.00 0.00 0.00 2.01
2446 2811 3.196254 CCTAGCCCGTAAAACTCCTGTAA 59.804 47.826 0.00 0.00 0.00 2.41
2447 2812 2.762327 CCTAGCCCGTAAAACTCCTGTA 59.238 50.000 0.00 0.00 0.00 2.74
2468 2833 2.462456 TCAACACACTCCATCTCAGC 57.538 50.000 0.00 0.00 0.00 4.26
2478 2844 6.545666 TCATCTTAACAACCAATCAACACACT 59.454 34.615 0.00 0.00 0.00 3.55
2483 2849 5.569059 CGCTTCATCTTAACAACCAATCAAC 59.431 40.000 0.00 0.00 0.00 3.18
2516 2882 2.417933 CGCTTCCACTCTGATTTTCAGG 59.582 50.000 4.78 0.00 44.39 3.86
2527 2893 3.129638 ACTCTCACTAATCGCTTCCACTC 59.870 47.826 0.00 0.00 0.00 3.51
2530 2896 4.524053 TCTACTCTCACTAATCGCTTCCA 58.476 43.478 0.00 0.00 0.00 3.53
2535 2901 4.904253 ACCTTCTACTCTCACTAATCGC 57.096 45.455 0.00 0.00 0.00 4.58
2536 2902 7.254863 GGACTAACCTTCTACTCTCACTAATCG 60.255 44.444 0.00 0.00 35.41 3.34
2547 2913 7.715266 AGAATTAACGGACTAACCTTCTACT 57.285 36.000 0.00 0.00 36.31 2.57
2576 2942 3.968649 TGCTAGACGTACGTGAAACTTT 58.031 40.909 28.16 0.00 31.75 2.66
2583 2949 4.896562 TCAAAAATGCTAGACGTACGTG 57.103 40.909 28.16 12.97 0.00 4.49
2584 2950 6.558009 TCTATCAAAAATGCTAGACGTACGT 58.442 36.000 23.04 23.04 0.00 3.57
2585 2951 7.591795 AGATCTATCAAAAATGCTAGACGTACG 59.408 37.037 15.01 15.01 0.00 3.67
2628 2994 9.754382 ATAGTTGTCTTGTCTAAAGTAAACGAA 57.246 29.630 0.00 0.00 0.00 3.85
2664 3030 5.594725 AGAGCGTGACCATATATCCGAATAT 59.405 40.000 0.00 0.00 32.72 1.28
2683 3049 8.474577 GTTGCAAATATTATGATGAAAAGAGCG 58.525 33.333 0.00 0.00 0.00 5.03
2730 3096 3.693807 ACAATGCAGAAGACATCCATGT 58.306 40.909 0.00 0.00 45.16 3.21
2814 3180 4.358851 CGTGAGTGGAGAGAATGAAGATC 58.641 47.826 0.00 0.00 0.00 2.75
2820 3186 3.017442 TCTACCGTGAGTGGAGAGAATG 58.983 50.000 0.00 0.00 31.39 2.67
2832 3198 3.119955 CGTGAGATTTCTGTCTACCGTGA 60.120 47.826 0.00 0.00 0.00 4.35
2836 3202 4.082679 AGTCACGTGAGATTTCTGTCTACC 60.083 45.833 20.73 1.41 0.00 3.18
2837 3203 5.049398 AGTCACGTGAGATTTCTGTCTAC 57.951 43.478 20.73 2.54 0.00 2.59
2838 3204 5.461526 CAAGTCACGTGAGATTTCTGTCTA 58.538 41.667 20.73 0.00 0.00 2.59
2839 3205 4.302455 CAAGTCACGTGAGATTTCTGTCT 58.698 43.478 20.73 6.08 0.00 3.41
2840 3206 3.430218 CCAAGTCACGTGAGATTTCTGTC 59.570 47.826 20.73 3.50 0.00 3.51
2841 3207 3.393800 CCAAGTCACGTGAGATTTCTGT 58.606 45.455 20.73 0.79 0.00 3.41
2842 3208 2.738846 CCCAAGTCACGTGAGATTTCTG 59.261 50.000 20.73 9.61 0.00 3.02
2843 3209 2.872038 GCCCAAGTCACGTGAGATTTCT 60.872 50.000 20.73 9.30 0.00 2.52
2844 3210 1.464997 GCCCAAGTCACGTGAGATTTC 59.535 52.381 20.73 6.76 0.00 2.17
2845 3211 1.523758 GCCCAAGTCACGTGAGATTT 58.476 50.000 20.73 11.12 0.00 2.17
2846 3212 0.321653 GGCCCAAGTCACGTGAGATT 60.322 55.000 20.73 14.20 0.00 2.40
2847 3213 1.296715 GGCCCAAGTCACGTGAGAT 59.703 57.895 20.73 8.06 0.00 2.75
2848 3214 2.741092 GGCCCAAGTCACGTGAGA 59.259 61.111 20.73 0.00 0.00 3.27
2849 3215 2.358737 GGGCCCAAGTCACGTGAG 60.359 66.667 20.73 8.02 0.00 3.51
2850 3216 2.847234 AGGGCCCAAGTCACGTGA 60.847 61.111 27.56 15.76 0.00 4.35
2851 3217 2.669569 CAGGGCCCAAGTCACGTG 60.670 66.667 27.56 9.94 0.00 4.49
2852 3218 2.279037 AAACAGGGCCCAAGTCACGT 62.279 55.000 27.56 5.94 0.00 4.49
2853 3219 1.528309 AAACAGGGCCCAAGTCACG 60.528 57.895 27.56 5.24 0.00 4.35
2854 3220 0.755327 ACAAACAGGGCCCAAGTCAC 60.755 55.000 27.56 0.00 0.00 3.67
2855 3221 0.032615 AACAAACAGGGCCCAAGTCA 60.033 50.000 27.56 0.00 0.00 3.41
2856 3222 1.068588 GAAACAAACAGGGCCCAAGTC 59.931 52.381 27.56 5.16 0.00 3.01
2857 3223 1.119684 GAAACAAACAGGGCCCAAGT 58.880 50.000 27.56 19.92 0.00 3.16
2858 3224 1.118838 TGAAACAAACAGGGCCCAAG 58.881 50.000 27.56 19.16 0.00 3.61
2859 3225 1.208293 GTTGAAACAAACAGGGCCCAA 59.792 47.619 27.56 1.34 0.00 4.12
2860 3226 0.827368 GTTGAAACAAACAGGGCCCA 59.173 50.000 27.56 0.00 0.00 5.36
2861 3227 1.119684 AGTTGAAACAAACAGGGCCC 58.880 50.000 16.46 16.46 32.21 5.80
2862 3228 2.167487 TGAAGTTGAAACAAACAGGGCC 59.833 45.455 0.00 0.00 32.21 5.80
2863 3229 3.518634 TGAAGTTGAAACAAACAGGGC 57.481 42.857 0.00 0.00 32.21 5.19
2864 3230 5.072040 AGTTGAAGTTGAAACAAACAGGG 57.928 39.130 0.00 0.00 32.21 4.45
2865 3231 6.155827 TGAAGTTGAAGTTGAAACAAACAGG 58.844 36.000 0.00 0.00 32.21 4.00
2866 3232 6.863126 ACTGAAGTTGAAGTTGAAACAAACAG 59.137 34.615 0.00 0.00 32.21 3.16
2867 3233 6.744112 ACTGAAGTTGAAGTTGAAACAAACA 58.256 32.000 0.00 0.00 32.21 2.83
2868 3234 7.637709 AACTGAAGTTGAAGTTGAAACAAAC 57.362 32.000 0.00 0.00 35.34 2.93
2883 3249 0.693049 ATCCGAGGCCAACTGAAGTT 59.307 50.000 5.01 0.00 39.12 2.66
2884 3250 0.250513 GATCCGAGGCCAACTGAAGT 59.749 55.000 5.01 0.00 0.00 3.01
2885 3251 0.462759 GGATCCGAGGCCAACTGAAG 60.463 60.000 5.01 0.00 0.00 3.02
2886 3252 1.602237 GGATCCGAGGCCAACTGAA 59.398 57.895 5.01 0.00 0.00 3.02
2887 3253 2.367202 GGGATCCGAGGCCAACTGA 61.367 63.158 5.01 0.47 0.00 3.41
2888 3254 2.190578 GGGATCCGAGGCCAACTG 59.809 66.667 5.01 0.00 0.00 3.16
2899 3265 2.618709 GTGAAATGAATCCACGGGATCC 59.381 50.000 1.92 1.92 42.27 3.36
2900 3266 2.618709 GGTGAAATGAATCCACGGGATC 59.381 50.000 5.97 0.00 42.27 3.36
2901 3267 2.654863 GGTGAAATGAATCCACGGGAT 58.345 47.619 0.00 0.00 45.46 3.85
2902 3268 1.677518 CGGTGAAATGAATCCACGGGA 60.678 52.381 0.00 0.00 35.55 5.14
2903 3269 0.732571 CGGTGAAATGAATCCACGGG 59.267 55.000 0.00 0.00 0.00 5.28
2904 3270 0.732571 CCGGTGAAATGAATCCACGG 59.267 55.000 0.00 0.00 33.39 4.94
2905 3271 0.098728 GCCGGTGAAATGAATCCACG 59.901 55.000 1.90 0.00 0.00 4.94
2906 3272 1.173043 TGCCGGTGAAATGAATCCAC 58.827 50.000 1.90 0.00 0.00 4.02
2907 3273 1.916506 TTGCCGGTGAAATGAATCCA 58.083 45.000 1.90 0.00 0.00 3.41
2908 3274 3.253230 CTTTTGCCGGTGAAATGAATCC 58.747 45.455 1.90 0.00 0.00 3.01
2909 3275 3.674753 CACTTTTGCCGGTGAAATGAATC 59.325 43.478 1.90 0.00 35.69 2.52
2910 3276 3.320541 TCACTTTTGCCGGTGAAATGAAT 59.679 39.130 1.90 0.00 39.16 2.57
2911 3277 2.690497 TCACTTTTGCCGGTGAAATGAA 59.310 40.909 1.90 0.00 39.16 2.57
2912 3278 2.293122 CTCACTTTTGCCGGTGAAATGA 59.707 45.455 1.90 9.19 41.13 2.57
2913 3279 2.664916 CTCACTTTTGCCGGTGAAATG 58.335 47.619 1.90 7.76 41.13 2.32
2914 3280 1.000274 GCTCACTTTTGCCGGTGAAAT 60.000 47.619 1.90 0.00 41.13 2.17
2915 3281 0.383949 GCTCACTTTTGCCGGTGAAA 59.616 50.000 1.90 3.66 41.13 2.69
2916 3282 0.465460 AGCTCACTTTTGCCGGTGAA 60.465 50.000 1.90 0.00 41.13 3.18
2917 3283 0.465460 AAGCTCACTTTTGCCGGTGA 60.465 50.000 1.90 0.00 39.71 4.02
2918 3284 0.385390 AAAGCTCACTTTTGCCGGTG 59.615 50.000 1.90 0.00 43.74 4.94
2919 3285 0.385390 CAAAGCTCACTTTTGCCGGT 59.615 50.000 1.90 0.00 43.74 5.28
2920 3286 0.940991 GCAAAGCTCACTTTTGCCGG 60.941 55.000 8.58 0.00 43.74 6.13
2921 3287 0.940991 GGCAAAGCTCACTTTTGCCG 60.941 55.000 20.28 0.00 43.74 5.69
2922 3288 2.904664 GGCAAAGCTCACTTTTGCC 58.095 52.632 20.28 20.28 43.74 4.52
2923 3289 1.202452 AGTGGCAAAGCTCACTTTTGC 60.202 47.619 10.91 10.91 43.74 3.68
2924 3290 2.099592 TCAGTGGCAAAGCTCACTTTTG 59.900 45.455 3.16 0.00 43.74 2.44
2925 3291 2.378038 TCAGTGGCAAAGCTCACTTTT 58.622 42.857 3.16 0.00 43.74 2.27
2927 3293 1.952296 CTTCAGTGGCAAAGCTCACTT 59.048 47.619 3.16 0.00 37.74 3.16
2928 3294 1.133976 ACTTCAGTGGCAAAGCTCACT 60.134 47.619 0.10 0.10 39.37 3.41
2929 3295 1.312815 ACTTCAGTGGCAAAGCTCAC 58.687 50.000 0.00 0.00 32.66 3.51
2930 3296 2.158827 TGTACTTCAGTGGCAAAGCTCA 60.159 45.455 0.00 0.00 0.00 4.26
2931 3297 2.224314 GTGTACTTCAGTGGCAAAGCTC 59.776 50.000 0.00 0.00 0.00 4.09
2932 3298 2.222027 GTGTACTTCAGTGGCAAAGCT 58.778 47.619 0.00 0.00 0.00 3.74
2933 3299 1.069906 CGTGTACTTCAGTGGCAAAGC 60.070 52.381 0.00 0.00 0.00 3.51
2934 3300 2.032894 CACGTGTACTTCAGTGGCAAAG 60.033 50.000 7.58 0.00 0.00 2.77
2935 3301 1.937223 CACGTGTACTTCAGTGGCAAA 59.063 47.619 7.58 0.00 0.00 3.68
2936 3302 1.577468 CACGTGTACTTCAGTGGCAA 58.423 50.000 7.58 0.00 0.00 4.52
2937 3303 0.878523 GCACGTGTACTTCAGTGGCA 60.879 55.000 18.38 0.00 35.35 4.92
2938 3304 0.600255 AGCACGTGTACTTCAGTGGC 60.600 55.000 18.38 0.00 35.35 5.01
2939 3305 1.792949 GAAGCACGTGTACTTCAGTGG 59.207 52.381 23.07 0.00 41.56 4.00
2940 3306 2.469826 TGAAGCACGTGTACTTCAGTG 58.530 47.619 25.41 0.63 45.48 3.66
2941 3307 2.882927 TGAAGCACGTGTACTTCAGT 57.117 45.000 25.41 0.75 45.48 3.41
2944 3310 4.992381 ATTTCTGAAGCACGTGTACTTC 57.008 40.909 21.91 21.91 42.15 3.01
2945 3311 4.213482 GGAATTTCTGAAGCACGTGTACTT 59.787 41.667 18.38 12.70 0.00 2.24
2946 3312 3.746492 GGAATTTCTGAAGCACGTGTACT 59.254 43.478 18.38 3.34 0.00 2.73
2947 3313 3.496884 TGGAATTTCTGAAGCACGTGTAC 59.503 43.478 18.38 9.38 0.00 2.90
2948 3314 3.496884 GTGGAATTTCTGAAGCACGTGTA 59.503 43.478 18.38 0.66 0.00 2.90
2949 3315 2.290641 GTGGAATTTCTGAAGCACGTGT 59.709 45.455 18.38 0.00 0.00 4.49
2950 3316 2.549754 AGTGGAATTTCTGAAGCACGTG 59.450 45.455 12.28 12.28 0.00 4.49
2951 3317 2.549754 CAGTGGAATTTCTGAAGCACGT 59.450 45.455 0.00 0.00 34.02 4.49
2952 3318 2.807967 TCAGTGGAATTTCTGAAGCACG 59.192 45.455 6.51 0.00 37.69 5.34
2953 3319 4.836125 TTCAGTGGAATTTCTGAAGCAC 57.164 40.909 13.67 0.00 43.02 4.40
2954 3320 5.850557 TTTTCAGTGGAATTTCTGAAGCA 57.149 34.783 15.69 8.78 46.54 3.91
2955 3321 5.636543 CCATTTTCAGTGGAATTTCTGAAGC 59.363 40.000 15.69 0.00 46.54 3.86
2956 3322 6.985117 TCCATTTTCAGTGGAATTTCTGAAG 58.015 36.000 15.69 9.01 46.54 3.02
2957 3323 6.975196 TCCATTTTCAGTGGAATTTCTGAA 57.025 33.333 13.67 13.67 45.15 3.02
2983 3349 0.601558 ATGCTTTGCCAGTGAAGCTG 59.398 50.000 14.15 0.00 46.39 4.24
2984 3350 2.205022 TATGCTTTGCCAGTGAAGCT 57.795 45.000 14.15 5.05 46.39 3.74
2985 3351 3.442100 GAATATGCTTTGCCAGTGAAGC 58.558 45.455 7.85 7.85 46.42 3.86
2986 3352 3.444742 TGGAATATGCTTTGCCAGTGAAG 59.555 43.478 0.00 0.00 0.00 3.02
2987 3353 3.193267 GTGGAATATGCTTTGCCAGTGAA 59.807 43.478 0.00 0.00 0.00 3.18
2988 3354 2.754552 GTGGAATATGCTTTGCCAGTGA 59.245 45.455 0.00 0.00 0.00 3.41
2989 3355 2.492881 TGTGGAATATGCTTTGCCAGTG 59.507 45.455 0.00 0.00 0.00 3.66
2990 3356 2.806434 TGTGGAATATGCTTTGCCAGT 58.194 42.857 0.00 0.00 0.00 4.00
2991 3357 4.581824 AGTATGTGGAATATGCTTTGCCAG 59.418 41.667 0.00 0.00 22.45 4.85
2992 3358 4.535781 AGTATGTGGAATATGCTTTGCCA 58.464 39.130 0.00 0.00 22.45 4.92
2993 3359 5.520376 AAGTATGTGGAATATGCTTTGCC 57.480 39.130 0.00 0.00 37.07 4.52
2997 3363 8.121305 TGAAACAAAGTATGTGGAATATGCTT 57.879 30.769 0.00 0.00 41.68 3.91
2998 3364 7.629222 GCTGAAACAAAGTATGTGGAATATGCT 60.629 37.037 0.00 0.00 42.99 3.79
2999 3365 6.473455 GCTGAAACAAAGTATGTGGAATATGC 59.527 38.462 0.00 0.00 42.99 3.14
3000 3366 7.765307 AGCTGAAACAAAGTATGTGGAATATG 58.235 34.615 0.00 0.00 42.99 1.78
3001 3367 7.944729 AGCTGAAACAAAGTATGTGGAATAT 57.055 32.000 0.00 0.00 42.99 1.28
3002 3368 7.665559 AGAAGCTGAAACAAAGTATGTGGAATA 59.334 33.333 0.00 0.00 42.99 1.75
3003 3369 6.491403 AGAAGCTGAAACAAAGTATGTGGAAT 59.509 34.615 0.00 0.00 42.99 3.01
3004 3370 5.827797 AGAAGCTGAAACAAAGTATGTGGAA 59.172 36.000 0.00 0.00 42.99 3.53
3005 3371 5.239306 CAGAAGCTGAAACAAAGTATGTGGA 59.761 40.000 0.00 0.00 36.52 4.02
3006 3372 5.239306 TCAGAAGCTGAAACAAAGTATGTGG 59.761 40.000 0.00 0.00 38.03 4.17
3007 3373 6.304356 TCAGAAGCTGAAACAAAGTATGTG 57.696 37.500 0.00 0.00 38.03 3.21
3008 3374 7.516198 AATCAGAAGCTGAAACAAAGTATGT 57.484 32.000 0.78 0.00 44.04 2.29
3009 3375 8.807667 AAAATCAGAAGCTGAAACAAAGTATG 57.192 30.769 0.78 0.00 44.04 2.39
3036 3402 9.667107 AGATTTAATTAACAGATCCTCGTTGAA 57.333 29.630 0.00 0.00 0.00 2.69
3037 3403 9.098355 CAGATTTAATTAACAGATCCTCGTTGA 57.902 33.333 0.00 0.00 0.00 3.18
3038 3404 9.098355 TCAGATTTAATTAACAGATCCTCGTTG 57.902 33.333 0.00 0.00 0.00 4.10
3039 3405 9.838339 ATCAGATTTAATTAACAGATCCTCGTT 57.162 29.630 0.00 0.00 0.00 3.85
3040 3406 9.265901 CATCAGATTTAATTAACAGATCCTCGT 57.734 33.333 0.00 0.00 0.00 4.18
3041 3407 9.481340 TCATCAGATTTAATTAACAGATCCTCG 57.519 33.333 0.00 0.00 0.00 4.63
3053 3419 8.992073 GCCTTGTTTGTTTCATCAGATTTAATT 58.008 29.630 0.00 0.00 0.00 1.40
3054 3420 7.603784 GGCCTTGTTTGTTTCATCAGATTTAAT 59.396 33.333 0.00 0.00 0.00 1.40
3055 3421 6.928492 GGCCTTGTTTGTTTCATCAGATTTAA 59.072 34.615 0.00 0.00 0.00 1.52
3056 3422 6.267471 AGGCCTTGTTTGTTTCATCAGATTTA 59.733 34.615 0.00 0.00 0.00 1.40
3057 3423 5.070847 AGGCCTTGTTTGTTTCATCAGATTT 59.929 36.000 0.00 0.00 0.00 2.17
3058 3424 4.590222 AGGCCTTGTTTGTTTCATCAGATT 59.410 37.500 0.00 0.00 0.00 2.40
3059 3425 4.154942 AGGCCTTGTTTGTTTCATCAGAT 58.845 39.130 0.00 0.00 0.00 2.90
3060 3426 3.565307 AGGCCTTGTTTGTTTCATCAGA 58.435 40.909 0.00 0.00 0.00 3.27
3061 3427 4.326504 AAGGCCTTGTTTGTTTCATCAG 57.673 40.909 19.73 0.00 0.00 2.90
3062 3428 5.136828 TCTAAGGCCTTGTTTGTTTCATCA 58.863 37.500 28.77 1.61 0.00 3.07
3063 3429 5.705609 TCTAAGGCCTTGTTTGTTTCATC 57.294 39.130 28.77 0.00 0.00 2.92
3064 3430 5.047092 CCATCTAAGGCCTTGTTTGTTTCAT 60.047 40.000 28.77 0.00 0.00 2.57
3065 3431 4.280677 CCATCTAAGGCCTTGTTTGTTTCA 59.719 41.667 28.77 3.22 0.00 2.69
3066 3432 4.280929 ACCATCTAAGGCCTTGTTTGTTTC 59.719 41.667 28.77 0.00 0.00 2.78
3067 3433 4.223144 ACCATCTAAGGCCTTGTTTGTTT 58.777 39.130 28.77 0.57 0.00 2.83
3068 3434 3.826729 GACCATCTAAGGCCTTGTTTGTT 59.173 43.478 28.77 10.46 0.00 2.83
3069 3435 3.074538 AGACCATCTAAGGCCTTGTTTGT 59.925 43.478 28.77 17.31 0.00 2.83
3070 3436 3.690460 AGACCATCTAAGGCCTTGTTTG 58.310 45.455 28.77 19.78 0.00 2.93
3071 3437 4.202567 TGAAGACCATCTAAGGCCTTGTTT 60.203 41.667 28.77 9.15 30.98 2.83
3072 3438 3.330701 TGAAGACCATCTAAGGCCTTGTT 59.669 43.478 28.77 9.52 30.98 2.83
3073 3439 2.912956 TGAAGACCATCTAAGGCCTTGT 59.087 45.455 28.77 16.69 30.98 3.16
3074 3440 3.634397 TGAAGACCATCTAAGGCCTTG 57.366 47.619 28.77 17.30 30.98 3.61
3075 3441 4.870021 ATTGAAGACCATCTAAGGCCTT 57.130 40.909 24.18 24.18 33.75 4.35
3076 3442 4.228210 TCAATTGAAGACCATCTAAGGCCT 59.772 41.667 5.45 0.00 0.00 5.19
3077 3443 4.336713 GTCAATTGAAGACCATCTAAGGCC 59.663 45.833 10.35 0.00 0.00 5.19
3078 3444 4.943705 TGTCAATTGAAGACCATCTAAGGC 59.056 41.667 10.35 0.00 35.15 4.35
3079 3445 5.939883 TGTGTCAATTGAAGACCATCTAAGG 59.060 40.000 10.35 0.00 35.15 2.69
3080 3446 6.652481 ACTGTGTCAATTGAAGACCATCTAAG 59.348 38.462 10.35 5.19 35.15 2.18
3081 3447 6.533730 ACTGTGTCAATTGAAGACCATCTAA 58.466 36.000 10.35 0.00 35.15 2.10
3082 3448 6.114187 ACTGTGTCAATTGAAGACCATCTA 57.886 37.500 10.35 0.00 35.15 1.98
3083 3449 4.978099 ACTGTGTCAATTGAAGACCATCT 58.022 39.130 10.35 0.00 35.15 2.90
3084 3450 6.992063 ATACTGTGTCAATTGAAGACCATC 57.008 37.500 10.35 0.00 35.15 3.51
3085 3451 8.489489 AGATATACTGTGTCAATTGAAGACCAT 58.511 33.333 10.35 6.39 35.15 3.55
3086 3452 7.851228 AGATATACTGTGTCAATTGAAGACCA 58.149 34.615 10.35 0.62 35.15 4.02
3087 3453 9.250624 GTAGATATACTGTGTCAATTGAAGACC 57.749 37.037 10.35 0.00 35.15 3.85
3090 3456 8.759641 GCAGTAGATATACTGTGTCAATTGAAG 58.240 37.037 24.41 6.90 46.74 3.02
3091 3457 7.710907 GGCAGTAGATATACTGTGTCAATTGAA 59.289 37.037 24.41 0.00 46.74 2.69
3092 3458 7.069950 AGGCAGTAGATATACTGTGTCAATTGA 59.930 37.037 24.41 3.38 46.74 2.57
3093 3459 7.212976 AGGCAGTAGATATACTGTGTCAATTG 58.787 38.462 24.41 0.00 46.74 2.32
3094 3460 7.366847 AGGCAGTAGATATACTGTGTCAATT 57.633 36.000 24.41 4.67 46.74 2.32
3095 3461 6.985653 AGGCAGTAGATATACTGTGTCAAT 57.014 37.500 24.41 6.07 46.74 2.57
3096 3462 6.791867 AAGGCAGTAGATATACTGTGTCAA 57.208 37.500 24.41 0.00 46.74 3.18
3097 3463 6.607600 AGAAAGGCAGTAGATATACTGTGTCA 59.392 38.462 24.41 0.00 46.74 3.58
3098 3464 7.045126 AGAAAGGCAGTAGATATACTGTGTC 57.955 40.000 24.41 16.85 46.74 3.67
3099 3465 7.425224 AAGAAAGGCAGTAGATATACTGTGT 57.575 36.000 24.41 12.18 46.74 3.72
3100 3466 7.225538 CCAAAGAAAGGCAGTAGATATACTGTG 59.774 40.741 24.41 13.93 46.74 3.66
3101 3467 7.275920 CCAAAGAAAGGCAGTAGATATACTGT 58.724 38.462 24.41 8.43 46.74 3.55
3116 3482 5.163814 CGATCTAAAGTGAGCCAAAGAAAGG 60.164 44.000 0.00 0.00 0.00 3.11
3117 3483 5.163814 CCGATCTAAAGTGAGCCAAAGAAAG 60.164 44.000 0.00 0.00 0.00 2.62
3118 3484 4.695455 CCGATCTAAAGTGAGCCAAAGAAA 59.305 41.667 0.00 0.00 0.00 2.52
3119 3485 4.253685 CCGATCTAAAGTGAGCCAAAGAA 58.746 43.478 0.00 0.00 0.00 2.52
3120 3486 3.260884 ACCGATCTAAAGTGAGCCAAAGA 59.739 43.478 0.00 0.00 0.00 2.52
3121 3487 3.600388 ACCGATCTAAAGTGAGCCAAAG 58.400 45.455 0.00 0.00 0.00 2.77
3122 3488 3.695830 ACCGATCTAAAGTGAGCCAAA 57.304 42.857 0.00 0.00 0.00 3.28
3123 3489 3.767673 ACTACCGATCTAAAGTGAGCCAA 59.232 43.478 0.00 0.00 0.00 4.52
3124 3490 3.362706 ACTACCGATCTAAAGTGAGCCA 58.637 45.455 0.00 0.00 0.00 4.75
3125 3491 4.388378 AACTACCGATCTAAAGTGAGCC 57.612 45.455 0.00 0.00 0.00 4.70
3126 3492 6.562518 AGTTAACTACCGATCTAAAGTGAGC 58.437 40.000 6.26 0.00 0.00 4.26
3127 3493 8.983307 AAAGTTAACTACCGATCTAAAGTGAG 57.017 34.615 8.92 0.00 0.00 3.51
3128 3494 9.415544 GAAAAGTTAACTACCGATCTAAAGTGA 57.584 33.333 8.92 0.00 0.00 3.41
3129 3495 9.199982 TGAAAAGTTAACTACCGATCTAAAGTG 57.800 33.333 8.92 0.00 0.00 3.16
3130 3496 9.201127 GTGAAAAGTTAACTACCGATCTAAAGT 57.799 33.333 8.92 0.00 0.00 2.66
3131 3497 8.654215 GGTGAAAAGTTAACTACCGATCTAAAG 58.346 37.037 8.92 0.00 0.00 1.85
3132 3498 8.149647 TGGTGAAAAGTTAACTACCGATCTAAA 58.850 33.333 16.79 0.00 0.00 1.85
3133 3499 7.599998 GTGGTGAAAAGTTAACTACCGATCTAA 59.400 37.037 16.79 0.46 0.00 2.10
3134 3500 7.092716 GTGGTGAAAAGTTAACTACCGATCTA 58.907 38.462 16.79 1.04 0.00 1.98
3135 3501 5.930569 GTGGTGAAAAGTTAACTACCGATCT 59.069 40.000 16.79 0.00 0.00 2.75
3136 3502 5.697633 TGTGGTGAAAAGTTAACTACCGATC 59.302 40.000 16.79 11.67 0.00 3.69
3137 3503 5.613329 TGTGGTGAAAAGTTAACTACCGAT 58.387 37.500 16.79 0.00 0.00 4.18
3138 3504 5.021033 TGTGGTGAAAAGTTAACTACCGA 57.979 39.130 16.79 6.72 0.00 4.69
3139 3505 5.738118 TTGTGGTGAAAAGTTAACTACCG 57.262 39.130 16.79 0.00 0.00 4.02
3140 3506 9.836076 GAATATTGTGGTGAAAAGTTAACTACC 57.164 33.333 15.59 15.59 0.00 3.18
3165 3531 8.974408 CGTGTTTCGGTAAGATCATTTATATGA 58.026 33.333 0.00 0.00 39.27 2.15
3183 3549 3.168193 GGCACAAAATATCCGTGTTTCG 58.832 45.455 0.00 0.00 39.52 3.46
3184 3550 4.167554 TGGCACAAAATATCCGTGTTTC 57.832 40.909 0.00 0.00 31.92 2.78
3220 3586 7.209471 AGGTTCAACGACTTATGCATAAAAA 57.791 32.000 19.32 0.34 0.00 1.94
3221 3587 6.811253 AGGTTCAACGACTTATGCATAAAA 57.189 33.333 19.32 6.95 0.00 1.52
3222 3588 6.653320 AGAAGGTTCAACGACTTATGCATAAA 59.347 34.615 19.32 0.84 0.00 1.40
3223 3589 6.170506 AGAAGGTTCAACGACTTATGCATAA 58.829 36.000 17.94 17.94 0.00 1.90
3224 3590 5.730550 AGAAGGTTCAACGACTTATGCATA 58.269 37.500 1.16 1.16 0.00 3.14
3225 3591 4.579869 AGAAGGTTCAACGACTTATGCAT 58.420 39.130 3.79 3.79 0.00 3.96
3226 3592 3.994392 GAGAAGGTTCAACGACTTATGCA 59.006 43.478 0.00 0.00 0.00 3.96
3227 3593 3.994392 TGAGAAGGTTCAACGACTTATGC 59.006 43.478 0.00 0.00 0.00 3.14
3228 3594 6.423905 TCTTTGAGAAGGTTCAACGACTTATG 59.576 38.462 0.00 0.00 36.84 1.90
3229 3595 6.424207 GTCTTTGAGAAGGTTCAACGACTTAT 59.576 38.462 14.38 0.00 45.47 1.73
3230 3596 5.751990 GTCTTTGAGAAGGTTCAACGACTTA 59.248 40.000 14.38 0.00 45.47 2.24
3231 3597 4.571176 GTCTTTGAGAAGGTTCAACGACTT 59.429 41.667 14.38 0.00 45.47 3.01
3232 3598 4.120589 GTCTTTGAGAAGGTTCAACGACT 58.879 43.478 14.38 0.00 45.47 4.18
3233 3599 4.454403 GTCTTTGAGAAGGTTCAACGAC 57.546 45.455 8.83 8.83 44.00 4.34
3234 3600 4.369182 GAGTCTTTGAGAAGGTTCAACGA 58.631 43.478 0.00 0.00 36.84 3.85
3235 3601 3.495001 GGAGTCTTTGAGAAGGTTCAACG 59.505 47.826 0.00 0.00 36.84 4.10
3236 3602 3.815962 GGGAGTCTTTGAGAAGGTTCAAC 59.184 47.826 0.00 0.00 36.84 3.18
3237 3603 3.716872 AGGGAGTCTTTGAGAAGGTTCAA 59.283 43.478 0.00 0.00 35.38 2.69
3238 3604 3.318313 AGGGAGTCTTTGAGAAGGTTCA 58.682 45.455 0.00 0.00 33.56 3.18
3239 3605 4.359434 AAGGGAGTCTTTGAGAAGGTTC 57.641 45.455 0.00 0.00 33.56 3.62
3240 3606 4.797912 AAAGGGAGTCTTTGAGAAGGTT 57.202 40.909 0.00 0.00 43.50 3.50
3249 3615 2.439507 TCTCAGTGCAAAGGGAGTCTTT 59.560 45.455 0.00 0.00 45.85 2.52
3250 3616 2.050144 TCTCAGTGCAAAGGGAGTCTT 58.950 47.619 0.00 0.00 37.28 3.01
3251 3617 1.722034 TCTCAGTGCAAAGGGAGTCT 58.278 50.000 0.00 0.00 0.00 3.24
3252 3618 2.147150 GTTCTCAGTGCAAAGGGAGTC 58.853 52.381 0.00 0.00 0.00 3.36
3253 3619 1.490490 TGTTCTCAGTGCAAAGGGAGT 59.510 47.619 0.00 0.00 0.00 3.85
3254 3620 1.876156 GTGTTCTCAGTGCAAAGGGAG 59.124 52.381 0.00 0.00 0.00 4.30
3255 3621 1.211703 TGTGTTCTCAGTGCAAAGGGA 59.788 47.619 0.00 0.00 0.00 4.20
3256 3622 1.679139 TGTGTTCTCAGTGCAAAGGG 58.321 50.000 0.00 0.00 0.00 3.95
3257 3623 3.996150 ATTGTGTTCTCAGTGCAAAGG 57.004 42.857 0.00 0.00 0.00 3.11
3258 3624 4.923893 TGAATTGTGTTCTCAGTGCAAAG 58.076 39.130 0.00 0.00 0.00 2.77
3259 3625 4.639755 TCTGAATTGTGTTCTCAGTGCAAA 59.360 37.500 0.00 0.00 38.20 3.68
3260 3626 4.198530 TCTGAATTGTGTTCTCAGTGCAA 58.801 39.130 0.00 0.00 38.20 4.08
3261 3627 3.807553 TCTGAATTGTGTTCTCAGTGCA 58.192 40.909 0.00 0.00 38.20 4.57
3262 3628 3.364764 GCTCTGAATTGTGTTCTCAGTGC 60.365 47.826 8.92 8.92 44.55 4.40
3263 3629 3.188048 GGCTCTGAATTGTGTTCTCAGTG 59.812 47.826 0.00 0.00 38.20 3.66
3264 3630 3.406764 GGCTCTGAATTGTGTTCTCAGT 58.593 45.455 0.00 0.00 38.20 3.41
3265 3631 2.746362 GGGCTCTGAATTGTGTTCTCAG 59.254 50.000 0.00 0.00 38.34 3.35
3266 3632 2.373169 AGGGCTCTGAATTGTGTTCTCA 59.627 45.455 0.00 0.00 0.00 3.27
3267 3633 3.006247 GAGGGCTCTGAATTGTGTTCTC 58.994 50.000 0.00 0.00 0.00 2.87
3268 3634 2.290577 GGAGGGCTCTGAATTGTGTTCT 60.291 50.000 0.00 0.00 0.00 3.01
3269 3635 2.087646 GGAGGGCTCTGAATTGTGTTC 58.912 52.381 0.00 0.00 0.00 3.18
3270 3636 1.707427 AGGAGGGCTCTGAATTGTGTT 59.293 47.619 0.00 0.00 0.00 3.32
3271 3637 1.366319 AGGAGGGCTCTGAATTGTGT 58.634 50.000 0.00 0.00 0.00 3.72
3272 3638 2.026449 AGAAGGAGGGCTCTGAATTGTG 60.026 50.000 0.00 0.00 0.00 3.33
3273 3639 2.238395 GAGAAGGAGGGCTCTGAATTGT 59.762 50.000 0.00 0.00 0.00 2.71
3274 3640 2.238144 TGAGAAGGAGGGCTCTGAATTG 59.762 50.000 0.00 0.00 32.44 2.32
3275 3641 2.238395 GTGAGAAGGAGGGCTCTGAATT 59.762 50.000 0.00 0.00 32.44 2.17
3276 3642 1.836802 GTGAGAAGGAGGGCTCTGAAT 59.163 52.381 0.00 0.00 32.44 2.57
3277 3643 1.270907 GTGAGAAGGAGGGCTCTGAA 58.729 55.000 0.00 0.00 32.44 3.02
3278 3644 0.115152 TGTGAGAAGGAGGGCTCTGA 59.885 55.000 0.00 0.00 32.44 3.27
3279 3645 0.979665 TTGTGAGAAGGAGGGCTCTG 59.020 55.000 0.00 0.00 32.44 3.35
3280 3646 1.203237 TCTTGTGAGAAGGAGGGCTCT 60.203 52.381 0.00 0.00 32.44 4.09
3281 3647 1.270907 TCTTGTGAGAAGGAGGGCTC 58.729 55.000 0.00 0.00 0.00 4.70
3282 3648 1.734655 TTCTTGTGAGAAGGAGGGCT 58.265 50.000 0.00 0.00 36.99 5.19
3290 3656 3.297134 AGGTTTGCCTTCTTGTGAGAA 57.703 42.857 0.00 0.00 44.18 2.87
3299 3665 7.795707 CGATCAACGTACAAGGTTTGCCTTC 62.796 48.000 0.00 0.00 43.95 3.46
3300 3666 6.087826 CGATCAACGTACAAGGTTTGCCTT 62.088 45.833 0.00 0.00 45.30 4.35
3301 3667 4.655607 CGATCAACGTACAAGGTTTGCCT 61.656 47.826 0.00 0.00 41.31 4.75
3302 3668 2.412325 CGATCAACGTACAAGGTTTGCC 60.412 50.000 0.00 0.00 37.22 4.52
3303 3669 2.477375 TCGATCAACGTACAAGGTTTGC 59.523 45.455 0.00 0.00 43.13 3.68
3304 3670 4.718858 TTCGATCAACGTACAAGGTTTG 57.281 40.909 0.00 0.00 43.13 2.93
3305 3671 5.235516 AGATTCGATCAACGTACAAGGTTT 58.764 37.500 0.00 0.00 43.13 3.27
3306 3672 4.817517 AGATTCGATCAACGTACAAGGTT 58.182 39.130 0.00 0.00 43.13 3.50
3307 3673 4.451629 AGATTCGATCAACGTACAAGGT 57.548 40.909 0.00 0.00 43.13 3.50
3308 3674 5.103000 AGAAGATTCGATCAACGTACAAGG 58.897 41.667 0.00 0.00 43.13 3.61
3309 3675 6.633668 AAGAAGATTCGATCAACGTACAAG 57.366 37.500 0.00 0.00 43.13 3.16
3310 3676 7.045725 GAAAGAAGATTCGATCAACGTACAA 57.954 36.000 0.00 0.00 43.13 2.41
3311 3677 6.627690 GAAAGAAGATTCGATCAACGTACA 57.372 37.500 0.00 0.00 43.13 2.90
3322 3688 6.414966 TCTTCTGGATGCGAAAGAAGATTCG 61.415 44.000 10.30 5.16 46.81 3.34
3323 3689 4.872691 TCTTCTGGATGCGAAAGAAGATTC 59.127 41.667 10.30 0.00 46.81 2.52
3324 3690 4.836825 TCTTCTGGATGCGAAAGAAGATT 58.163 39.130 10.30 0.00 46.81 2.40
3325 3691 4.478206 TCTTCTGGATGCGAAAGAAGAT 57.522 40.909 10.30 0.00 46.81 2.40
3327 3693 3.854666 TCTCTTCTGGATGCGAAAGAAG 58.145 45.455 6.49 6.49 45.42 2.85
3328 3694 3.368843 CCTCTCTTCTGGATGCGAAAGAA 60.369 47.826 3.36 0.00 0.00 2.52
3329 3695 2.167281 CCTCTCTTCTGGATGCGAAAGA 59.833 50.000 0.00 2.02 0.00 2.52
3330 3696 2.548875 CCTCTCTTCTGGATGCGAAAG 58.451 52.381 0.00 0.00 0.00 2.62
3331 3697 1.406069 GCCTCTCTTCTGGATGCGAAA 60.406 52.381 0.00 0.00 0.00 3.46
3332 3698 0.176680 GCCTCTCTTCTGGATGCGAA 59.823 55.000 0.00 0.00 0.00 4.70
3333 3699 0.685785 AGCCTCTCTTCTGGATGCGA 60.686 55.000 0.00 0.00 31.42 5.10
3334 3700 0.530211 CAGCCTCTCTTCTGGATGCG 60.530 60.000 0.00 0.00 32.85 4.73
3335 3701 0.540923 ACAGCCTCTCTTCTGGATGC 59.459 55.000 0.00 0.00 42.86 3.91
3336 3702 1.134461 CCACAGCCTCTCTTCTGGATG 60.134 57.143 0.00 0.00 44.44 3.51
3337 3703 1.202330 CCACAGCCTCTCTTCTGGAT 58.798 55.000 0.00 0.00 34.76 3.41
3338 3704 0.906756 CCCACAGCCTCTCTTCTGGA 60.907 60.000 0.00 0.00 34.76 3.86
3339 3705 1.601171 CCCACAGCCTCTCTTCTGG 59.399 63.158 0.00 0.00 34.76 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.