Multiple sequence alignment - TraesCS5B01G414100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G414100 chr5B 100.000 6663 0 0 1 6663 588694711 588688049 0.000000e+00 12305.0
1 TraesCS5B01G414100 chr5B 85.081 1106 114 26 5559 6641 469210369 469211446 0.000000e+00 1081.0
2 TraesCS5B01G414100 chr5B 84.287 1031 108 25 5633 6641 469351894 469352892 0.000000e+00 957.0
3 TraesCS5B01G414100 chr5B 81.566 830 94 28 2405 3222 588782004 588781222 1.220000e-176 630.0
4 TraesCS5B01G414100 chr5B 84.306 497 50 14 1100 1582 588783054 588782572 1.690000e-125 460.0
5 TraesCS5B01G414100 chr5B 96.552 261 4 3 6398 6658 437799583 437799838 1.720000e-115 427.0
6 TraesCS5B01G414100 chr5B 86.420 324 35 6 3360 3678 588835143 588834824 4.950000e-91 346.0
7 TraesCS5B01G414100 chr5B 87.143 210 21 4 2815 3021 295072759 295072965 4.020000e-57 233.0
8 TraesCS5B01G414100 chr5B 89.617 183 18 1 2203 2384 588782248 588782066 1.450000e-56 231.0
9 TraesCS5B01G414100 chr5B 89.623 106 11 0 1908 2013 588782397 588782292 1.170000e-27 135.0
10 TraesCS5B01G414100 chr5B 100.000 29 0 0 530 558 55344590 55344562 3.000000e-03 54.7
11 TraesCS5B01G414100 chr5D 95.842 1491 44 10 2403 3890 480495092 480493617 0.000000e+00 2394.0
12 TraesCS5B01G414100 chr5D 90.730 1575 82 27 881 2407 480496680 480495122 0.000000e+00 2041.0
13 TraesCS5B01G414100 chr5D 87.234 1222 99 20 5279 6487 550165930 550167107 0.000000e+00 1339.0
14 TraesCS5B01G414100 chr5D 94.856 661 23 4 4573 5228 480491838 480491184 0.000000e+00 1022.0
15 TraesCS5B01G414100 chr5D 97.640 339 7 1 3889 4227 480493587 480493250 1.250000e-161 580.0
16 TraesCS5B01G414100 chr5D 96.500 200 6 1 4375 4574 480492118 480491920 4.980000e-86 329.0
17 TraesCS5B01G414100 chr5D 81.440 361 50 9 2466 2818 517708077 517708428 5.090000e-71 279.0
18 TraesCS5B01G414100 chr5D 92.262 168 13 0 716 883 25039980 25040147 8.640000e-59 239.0
19 TraesCS5B01G414100 chr5D 94.186 86 3 2 4301 4386 480493249 480493166 5.420000e-26 130.0
20 TraesCS5B01G414100 chr7B 96.451 1437 39 5 5229 6663 407605803 407604377 0.000000e+00 2361.0
21 TraesCS5B01G414100 chr7B 89.078 412 29 7 2405 2815 163012332 163011936 1.290000e-136 497.0
22 TraesCS5B01G414100 chr7B 83.124 557 48 17 4679 5225 163009402 163008882 3.640000e-127 466.0
23 TraesCS5B01G414100 chr7B 87.938 257 22 6 3889 4144 163009739 163009491 1.820000e-75 294.0
24 TraesCS5B01G414100 chr7B 81.250 384 55 12 3218 3591 163011348 163010972 1.820000e-75 294.0
25 TraesCS5B01G414100 chr7B 98.450 129 2 0 5252 5380 407606161 407606033 1.870000e-55 228.0
26 TraesCS5B01G414100 chr5A 94.578 1328 37 11 3924 5228 599253806 599252491 0.000000e+00 2021.0
27 TraesCS5B01G414100 chr5A 88.741 1581 105 27 879 2407 599258190 599256631 0.000000e+00 1866.0
28 TraesCS5B01G414100 chr5A 95.736 1032 35 6 2848 3876 599254831 599253806 0.000000e+00 1653.0
29 TraesCS5B01G414100 chr5A 88.739 817 74 12 2411 3222 599394539 599393736 0.000000e+00 983.0
30 TraesCS5B01G414100 chr5A 80.905 1304 152 53 2437 3696 599454699 599453449 0.000000e+00 939.0
31 TraesCS5B01G414100 chr5A 86.417 773 56 16 1417 2176 599395278 599394542 0.000000e+00 800.0
32 TraesCS5B01G414100 chr5A 96.372 441 15 1 2405 2844 599256599 599256159 0.000000e+00 725.0
33 TraesCS5B01G414100 chr5A 91.901 284 16 3 1100 1377 599395548 599395266 2.250000e-104 390.0
34 TraesCS5B01G414100 chr5A 90.361 83 7 1 636 717 599258271 599258189 2.540000e-19 108.0
35 TraesCS5B01G414100 chr4D 91.148 1446 77 15 5229 6663 197769832 197768427 0.000000e+00 1914.0
36 TraesCS5B01G414100 chr4D 88.494 1182 105 20 5228 6397 418436057 418434895 0.000000e+00 1400.0
37 TraesCS5B01G414100 chr4D 85.337 682 76 11 5843 6523 418435338 418434680 0.000000e+00 684.0
38 TraesCS5B01G414100 chr4D 94.737 57 1 1 4242 4298 268071157 268071103 3.310000e-13 87.9
39 TraesCS5B01G414100 chr6D 88.240 1182 108 19 5229 6397 54660244 54661407 0.000000e+00 1384.0
40 TraesCS5B01G414100 chr6D 85.907 667 74 6 5857 6523 54660975 54661621 0.000000e+00 693.0
41 TraesCS5B01G414100 chr6D 77.445 501 49 33 1025 1469 63326923 63327415 2.400000e-59 241.0
42 TraesCS5B01G414100 chr6D 91.765 170 14 0 715 884 31273761 31273592 3.110000e-58 237.0
43 TraesCS5B01G414100 chr6D 94.737 57 1 1 4242 4298 90122965 90123019 3.310000e-13 87.9
44 TraesCS5B01G414100 chr6D 100.000 29 0 0 1457 1485 63327252 63327280 3.000000e-03 54.7
45 TraesCS5B01G414100 chr6D 96.774 31 1 0 531 561 429480348 429480318 1.200000e-02 52.8
46 TraesCS5B01G414100 chr1D 89.041 1022 81 12 5649 6663 114633192 114632195 0.000000e+00 1238.0
47 TraesCS5B01G414100 chr1D 90.777 412 36 2 5228 5638 114643362 114642952 3.510000e-152 549.0
48 TraesCS5B01G414100 chr1D 82.628 449 47 17 1258 1682 393439707 393440148 1.060000e-97 368.0
49 TraesCS5B01G414100 chr1D 90.110 182 17 1 706 887 206955710 206955530 1.120000e-57 235.0
50 TraesCS5B01G414100 chr1D 76.271 354 58 11 1130 1458 3760778 3761130 1.490000e-36 165.0
51 TraesCS5B01G414100 chr1D 75.824 364 64 10 1130 1469 3799590 3799953 5.350000e-36 163.0
52 TraesCS5B01G414100 chr1A 86.561 1131 88 26 5549 6663 526734879 526735961 0.000000e+00 1188.0
53 TraesCS5B01G414100 chr1A 82.215 298 29 13 1302 1588 492200514 492200230 1.120000e-57 235.0
54 TraesCS5B01G414100 chr7D 88.134 986 94 12 5321 6290 92421356 92422334 0.000000e+00 1151.0
55 TraesCS5B01G414100 chr7D 81.399 1215 139 46 2405 3583 199131115 199129952 0.000000e+00 911.0
56 TraesCS5B01G414100 chr7D 84.626 722 79 14 5948 6663 92421898 92422593 0.000000e+00 689.0
57 TraesCS5B01G414100 chr7D 82.878 549 48 15 4679 5225 199128447 199127943 1.020000e-122 451.0
58 TraesCS5B01G414100 chr7D 85.766 274 30 8 3889 4160 199128785 199128519 1.410000e-71 281.0
59 TraesCS5B01G414100 chr2B 84.644 1094 119 15 5228 6290 2135921 2134846 0.000000e+00 1044.0
60 TraesCS5B01G414100 chr2B 91.329 173 15 0 712 884 602756688 602756860 3.110000e-58 237.0
61 TraesCS5B01G414100 chr2B 93.103 58 2 1 4241 4298 338762255 338762310 4.280000e-12 84.2
62 TraesCS5B01G414100 chr7A 81.291 1224 137 47 2405 3591 208527528 208526360 0.000000e+00 907.0
63 TraesCS5B01G414100 chr7A 83.212 548 52 12 4679 5225 208524873 208524365 3.640000e-127 466.0
64 TraesCS5B01G414100 chr7A 85.714 210 23 5 2815 3021 83800454 83800249 1.460000e-51 215.0
65 TraesCS5B01G414100 chr3D 85.855 912 59 22 5757 6663 43019542 43020388 0.000000e+00 905.0
66 TraesCS5B01G414100 chr3D 93.260 549 20 8 5228 5766 43018173 43018714 0.000000e+00 793.0
67 TraesCS5B01G414100 chr3D 92.308 169 12 1 713 881 553739744 553739577 8.640000e-59 239.0
68 TraesCS5B01G414100 chr3D 85.279 197 23 4 2818 3013 45526492 45526683 1.470000e-46 198.0
69 TraesCS5B01G414100 chr3D 82.836 134 15 3 3087 3220 45526711 45526836 5.460000e-21 113.0
70 TraesCS5B01G414100 chr6A 90.431 627 40 11 5228 5843 26758141 26757524 0.000000e+00 808.0
71 TraesCS5B01G414100 chr6A 90.476 63 4 1 4242 4304 108936963 108936903 1.540000e-11 82.4
72 TraesCS5B01G414100 chr6A 100.000 29 0 0 1457 1485 80805112 80805140 3.000000e-03 54.7
73 TraesCS5B01G414100 chr1B 80.470 553 56 28 1179 1683 529509092 529508544 6.310000e-100 375.0
74 TraesCS5B01G414100 chr1B 79.268 82 14 3 534 614 661129104 661129183 3.000000e-03 54.7
75 TraesCS5B01G414100 chr4A 82.500 440 63 8 2634 3068 337547509 337547939 2.270000e-99 374.0
76 TraesCS5B01G414100 chr4A 92.814 167 12 0 716 882 18115555 18115389 6.680000e-60 243.0
77 TraesCS5B01G414100 chr4A 94.643 56 1 1 4242 4297 252680934 252680987 1.190000e-12 86.1
78 TraesCS5B01G414100 chr3A 89.691 194 19 1 691 883 585605828 585605635 5.160000e-61 246.0
79 TraesCS5B01G414100 chr3A 90.659 182 15 2 702 883 649812017 649811838 2.400000e-59 241.0
80 TraesCS5B01G414100 chr3A 94.737 57 1 2 4242 4298 340279480 340279534 3.310000e-13 87.9
81 TraesCS5B01G414100 chr2D 90.909 176 15 1 707 882 509744296 509744470 1.120000e-57 235.0
82 TraesCS5B01G414100 chr3B 80.916 131 16 9 4170 4298 341223018 341223141 1.980000e-15 95.3
83 TraesCS5B01G414100 chr4B 94.737 57 1 1 4242 4298 299564287 299564341 3.310000e-13 87.9
84 TraesCS5B01G414100 chr4B 89.041 73 4 4 5235 5305 663073831 663073761 3.310000e-13 87.9
85 TraesCS5B01G414100 chrUn 100.000 41 0 0 6496 6536 47535060 47535020 7.160000e-10 76.8
86 TraesCS5B01G414100 chrUn 100.000 28 0 0 2859 2886 235686370 235686397 1.200000e-02 52.8
87 TraesCS5B01G414100 chrUn 100.000 28 0 0 2859 2886 248746588 248746615 1.200000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G414100 chr5B 588688049 588694711 6662 True 12305.000000 12305 100.000000 1 6663 1 chr5B.!!$R2 6662
1 TraesCS5B01G414100 chr5B 469210369 469211446 1077 False 1081.000000 1081 85.081000 5559 6641 1 chr5B.!!$F3 1082
2 TraesCS5B01G414100 chr5B 469351894 469352892 998 False 957.000000 957 84.287000 5633 6641 1 chr5B.!!$F4 1008
3 TraesCS5B01G414100 chr5B 588781222 588783054 1832 True 364.000000 630 86.278000 1100 3222 4 chr5B.!!$R4 2122
4 TraesCS5B01G414100 chr5D 550165930 550167107 1177 False 1339.000000 1339 87.234000 5279 6487 1 chr5D.!!$F3 1208
5 TraesCS5B01G414100 chr5D 480491184 480496680 5496 True 1082.666667 2394 94.959000 881 5228 6 chr5D.!!$R1 4347
6 TraesCS5B01G414100 chr7B 407604377 407606161 1784 True 1294.500000 2361 97.450500 5229 6663 2 chr7B.!!$R2 1434
7 TraesCS5B01G414100 chr7B 163008882 163012332 3450 True 387.750000 497 85.347500 2405 5225 4 chr7B.!!$R1 2820
8 TraesCS5B01G414100 chr5A 599252491 599258271 5780 True 1274.600000 2021 93.157600 636 5228 5 chr5A.!!$R2 4592
9 TraesCS5B01G414100 chr5A 599453449 599454699 1250 True 939.000000 939 80.905000 2437 3696 1 chr5A.!!$R1 1259
10 TraesCS5B01G414100 chr5A 599393736 599395548 1812 True 724.333333 983 89.019000 1100 3222 3 chr5A.!!$R3 2122
11 TraesCS5B01G414100 chr4D 197768427 197769832 1405 True 1914.000000 1914 91.148000 5229 6663 1 chr4D.!!$R1 1434
12 TraesCS5B01G414100 chr4D 418434680 418436057 1377 True 1042.000000 1400 86.915500 5228 6523 2 chr4D.!!$R3 1295
13 TraesCS5B01G414100 chr6D 54660244 54661621 1377 False 1038.500000 1384 87.073500 5229 6523 2 chr6D.!!$F2 1294
14 TraesCS5B01G414100 chr1D 114632195 114633192 997 True 1238.000000 1238 89.041000 5649 6663 1 chr1D.!!$R1 1014
15 TraesCS5B01G414100 chr1A 526734879 526735961 1082 False 1188.000000 1188 86.561000 5549 6663 1 chr1A.!!$F1 1114
16 TraesCS5B01G414100 chr7D 92421356 92422593 1237 False 920.000000 1151 86.380000 5321 6663 2 chr7D.!!$F1 1342
17 TraesCS5B01G414100 chr7D 199127943 199131115 3172 True 547.666667 911 83.347667 2405 5225 3 chr7D.!!$R1 2820
18 TraesCS5B01G414100 chr2B 2134846 2135921 1075 True 1044.000000 1044 84.644000 5228 6290 1 chr2B.!!$R1 1062
19 TraesCS5B01G414100 chr7A 208524365 208527528 3163 True 686.500000 907 82.251500 2405 5225 2 chr7A.!!$R2 2820
20 TraesCS5B01G414100 chr3D 43018173 43020388 2215 False 849.000000 905 89.557500 5228 6663 2 chr3D.!!$F1 1435
21 TraesCS5B01G414100 chr6A 26757524 26758141 617 True 808.000000 808 90.431000 5228 5843 1 chr6A.!!$R1 615
22 TraesCS5B01G414100 chr1B 529508544 529509092 548 True 375.000000 375 80.470000 1179 1683 1 chr1B.!!$R1 504

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
70 71 0.036010 ACATGCCTATATGAGCCGGC 60.036 55.000 21.89 21.89 42.78 6.13 F
79 80 0.179020 TATGAGCCGGCCCATTTCTG 60.179 55.000 29.40 0.00 0.00 3.02 F
963 966 0.179032 TGTTTGCGGGACACATGAGT 60.179 50.000 0.00 0.00 0.00 3.41 F
1721 1880 0.179100 CTACAGTGCCGTCCATGAGG 60.179 60.000 0.00 0.00 0.00 3.86 F
1853 2013 1.151450 CCAGGGCTGTCACCAAGTT 59.849 57.895 0.00 0.00 0.00 2.66 F
2152 2327 2.379907 TGGGGAAAGCTTCAATTCTCCT 59.620 45.455 14.49 0.00 44.92 3.69 F
3266 5102 0.721718 CTAGCCGTTGTGCTACTTGC 59.278 55.000 0.00 0.00 42.75 4.01 F
5186 9288 0.031616 AGGGCGAGGAAGAGGAAGAT 60.032 55.000 0.00 0.00 0.00 2.40 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1383 1451 1.000843 TCACATGAACACTCCACTCCG 59.999 52.381 0.00 0.00 0.00 4.63 R
1667 1824 2.238521 GGAGTGGATTGAAGCAAACCA 58.761 47.619 5.21 5.21 42.51 3.67 R
2292 2477 1.283347 TCTCCAAAGCTGAGAGCCAT 58.717 50.000 0.00 0.00 43.77 4.40 R
2664 2900 1.386533 CAGAGCCCGAGATTTGCAAT 58.613 50.000 0.00 0.00 0.00 3.56 R
2919 4481 2.095059 GGTAGCCAACTCAATTGCACAG 60.095 50.000 0.00 0.00 36.93 3.66 R
3556 5398 4.440826 TTCAAGCAAGGGGTTACAACTA 57.559 40.909 0.00 0.00 32.48 2.24 R
5195 9297 0.686112 CTTCCTCGCCCTCTTCCTCT 60.686 60.000 0.00 0.00 0.00 3.69 R
6333 11567 1.358402 CAGAGATGCGACCCGAGAG 59.642 63.158 0.00 0.00 0.00 3.20 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 0.179108 GAAACATAGCTCTCGCCCGT 60.179 55.000 0.00 0.00 36.60 5.28
20 21 1.066605 GAAACATAGCTCTCGCCCGTA 59.933 52.381 0.00 0.00 36.60 4.02
21 22 1.108776 AACATAGCTCTCGCCCGTAA 58.891 50.000 0.00 0.00 36.60 3.18
23 24 0.669077 CATAGCTCTCGCCCGTAAGT 59.331 55.000 0.00 0.00 36.60 2.24
24 25 0.669077 ATAGCTCTCGCCCGTAAGTG 59.331 55.000 0.00 0.00 36.60 3.16
25 26 0.679002 TAGCTCTCGCCCGTAAGTGT 60.679 55.000 0.00 0.00 36.60 3.55
26 27 1.805945 GCTCTCGCCCGTAAGTGTG 60.806 63.158 0.00 0.00 0.00 3.82
28 29 1.592400 CTCTCGCCCGTAAGTGTGGA 61.592 60.000 0.00 0.00 0.00 4.02
29 30 1.445582 CTCGCCCGTAAGTGTGGAC 60.446 63.158 0.00 0.00 0.00 4.02
32 33 1.071814 GCCCGTAAGTGTGGACCAA 59.928 57.895 0.00 0.00 0.00 3.67
34 35 1.519408 CCCGTAAGTGTGGACCAAAG 58.481 55.000 0.00 0.00 0.00 2.77
36 37 2.485835 CCCGTAAGTGTGGACCAAAGAA 60.486 50.000 0.00 0.00 0.00 2.52
38 39 2.223377 CGTAAGTGTGGACCAAAGAAGC 59.777 50.000 0.00 0.00 0.00 3.86
39 40 1.692411 AAGTGTGGACCAAAGAAGCC 58.308 50.000 0.00 0.00 0.00 4.35
40 41 0.535102 AGTGTGGACCAAAGAAGCCG 60.535 55.000 0.00 0.00 0.00 5.52
41 42 1.896660 TGTGGACCAAAGAAGCCGC 60.897 57.895 0.00 0.00 0.00 6.53
42 43 1.600916 GTGGACCAAAGAAGCCGCT 60.601 57.895 0.00 0.00 0.00 5.52
43 44 1.302511 TGGACCAAAGAAGCCGCTC 60.303 57.895 0.00 0.00 0.00 5.03
44 45 1.302511 GGACCAAAGAAGCCGCTCA 60.303 57.895 0.00 0.00 0.00 4.26
45 46 1.301677 GGACCAAAGAAGCCGCTCAG 61.302 60.000 0.00 0.00 0.00 3.35
46 47 0.603975 GACCAAAGAAGCCGCTCAGT 60.604 55.000 0.00 0.00 0.00 3.41
47 48 0.886490 ACCAAAGAAGCCGCTCAGTG 60.886 55.000 0.00 0.00 0.00 3.66
48 49 1.208614 CAAAGAAGCCGCTCAGTGC 59.791 57.895 0.00 0.00 38.57 4.40
57 58 3.093278 GCTCAGTGCGTACATGCC 58.907 61.111 6.38 0.00 0.00 4.40
59 60 0.179111 GCTCAGTGCGTACATGCCTA 60.179 55.000 6.38 0.00 0.00 3.93
61 62 2.288213 GCTCAGTGCGTACATGCCTATA 60.288 50.000 6.38 0.00 0.00 1.31
62 63 3.615110 GCTCAGTGCGTACATGCCTATAT 60.615 47.826 6.38 0.00 0.00 0.86
63 64 3.913089 TCAGTGCGTACATGCCTATATG 58.087 45.455 6.38 0.00 0.00 1.78
64 65 3.572255 TCAGTGCGTACATGCCTATATGA 59.428 43.478 6.38 0.00 0.00 2.15
66 67 2.668457 GTGCGTACATGCCTATATGAGC 59.332 50.000 0.00 0.00 0.00 4.26
67 68 2.271800 GCGTACATGCCTATATGAGCC 58.728 52.381 0.00 0.00 0.00 4.70
69 70 2.735444 CGTACATGCCTATATGAGCCGG 60.735 54.545 0.00 0.00 0.00 6.13
70 71 0.036010 ACATGCCTATATGAGCCGGC 60.036 55.000 21.89 21.89 42.78 6.13
71 72 0.745845 CATGCCTATATGAGCCGGCC 60.746 60.000 26.15 15.80 41.80 6.13
72 73 1.915078 ATGCCTATATGAGCCGGCCC 61.915 60.000 26.15 13.59 41.80 5.80
73 74 2.592993 GCCTATATGAGCCGGCCCA 61.593 63.158 26.15 20.75 36.56 5.36
74 75 1.915078 GCCTATATGAGCCGGCCCAT 61.915 60.000 27.43 27.43 36.56 4.00
75 76 0.620556 CCTATATGAGCCGGCCCATT 59.379 55.000 29.40 17.91 0.00 3.16
76 77 1.004745 CCTATATGAGCCGGCCCATTT 59.995 52.381 29.40 22.79 0.00 2.32
77 78 2.359900 CTATATGAGCCGGCCCATTTC 58.640 52.381 29.40 17.21 0.00 2.17
78 79 0.773644 ATATGAGCCGGCCCATTTCT 59.226 50.000 29.40 11.38 0.00 2.52
79 80 0.179020 TATGAGCCGGCCCATTTCTG 60.179 55.000 29.40 0.00 0.00 3.02
80 81 2.830370 GAGCCGGCCCATTTCTGG 60.830 66.667 26.15 0.00 42.73 3.86
93 94 5.990120 CCATTTCTGGGAATTTCTGTTCT 57.010 39.130 0.00 0.00 39.04 3.01
94 95 6.350629 CCATTTCTGGGAATTTCTGTTCTT 57.649 37.500 0.00 0.00 39.04 2.52
95 96 6.762333 CCATTTCTGGGAATTTCTGTTCTTT 58.238 36.000 0.00 0.00 39.04 2.52
98 99 9.762933 CATTTCTGGGAATTTCTGTTCTTTTTA 57.237 29.630 0.00 0.00 0.00 1.52
100 101 7.284919 TCTGGGAATTTCTGTTCTTTTTACC 57.715 36.000 0.00 0.00 0.00 2.85
101 102 6.836527 TCTGGGAATTTCTGTTCTTTTTACCA 59.163 34.615 0.00 0.00 0.00 3.25
102 103 6.811954 TGGGAATTTCTGTTCTTTTTACCAC 58.188 36.000 0.00 0.00 0.00 4.16
103 104 6.609616 TGGGAATTTCTGTTCTTTTTACCACT 59.390 34.615 0.00 0.00 0.00 4.00
104 105 6.923508 GGGAATTTCTGTTCTTTTTACCACTG 59.076 38.462 0.00 0.00 0.00 3.66
105 106 6.923508 GGAATTTCTGTTCTTTTTACCACTGG 59.076 38.462 0.00 0.00 0.00 4.00
107 108 6.844097 TTTCTGTTCTTTTTACCACTGGTT 57.156 33.333 5.90 0.00 37.09 3.67
108 109 6.844097 TTCTGTTCTTTTTACCACTGGTTT 57.156 33.333 5.90 0.00 37.09 3.27
110 111 6.626302 TCTGTTCTTTTTACCACTGGTTTTG 58.374 36.000 5.90 0.00 37.09 2.44
111 112 5.725362 TGTTCTTTTTACCACTGGTTTTGG 58.275 37.500 5.90 0.00 37.09 3.28
112 113 5.113383 GTTCTTTTTACCACTGGTTTTGGG 58.887 41.667 5.90 0.00 38.59 4.12
113 114 4.611367 TCTTTTTACCACTGGTTTTGGGA 58.389 39.130 5.90 0.00 38.59 4.37
114 115 5.024118 TCTTTTTACCACTGGTTTTGGGAA 58.976 37.500 5.90 0.00 38.59 3.97
115 116 5.128008 TCTTTTTACCACTGGTTTTGGGAAG 59.872 40.000 5.90 3.64 38.25 3.46
116 117 3.673543 TTACCACTGGTTTTGGGAAGT 57.326 42.857 5.90 0.00 38.59 3.01
117 118 2.067365 ACCACTGGTTTTGGGAAGTC 57.933 50.000 0.00 0.00 38.59 3.01
118 119 1.569072 ACCACTGGTTTTGGGAAGTCT 59.431 47.619 0.00 0.00 38.59 3.24
119 120 2.024369 ACCACTGGTTTTGGGAAGTCTT 60.024 45.455 0.00 0.00 38.59 3.01
121 122 3.287222 CACTGGTTTTGGGAAGTCTTCA 58.713 45.455 14.49 0.00 0.00 3.02
122 123 3.699038 CACTGGTTTTGGGAAGTCTTCAA 59.301 43.478 14.49 0.00 0.00 2.69
123 124 4.159506 CACTGGTTTTGGGAAGTCTTCAAA 59.840 41.667 14.49 5.29 0.00 2.69
124 125 4.159693 ACTGGTTTTGGGAAGTCTTCAAAC 59.840 41.667 14.49 14.42 31.21 2.93
126 127 3.704566 GGTTTTGGGAAGTCTTCAAACCT 59.295 43.478 25.13 0.00 38.86 3.50
131 132 3.223674 GGAAGTCTTCAAACCTTCCCA 57.776 47.619 14.49 0.00 45.56 4.37
132 133 3.149981 GGAAGTCTTCAAACCTTCCCAG 58.850 50.000 14.49 0.00 45.56 4.45
133 134 3.435169 GGAAGTCTTCAAACCTTCCCAGT 60.435 47.826 14.49 0.00 45.56 4.00
134 135 4.202430 GGAAGTCTTCAAACCTTCCCAGTA 60.202 45.833 14.49 0.00 45.56 2.74
135 136 5.515008 GGAAGTCTTCAAACCTTCCCAGTAT 60.515 44.000 14.49 0.00 45.56 2.12
136 137 5.167303 AGTCTTCAAACCTTCCCAGTATC 57.833 43.478 0.00 0.00 0.00 2.24
137 138 3.933332 GTCTTCAAACCTTCCCAGTATCG 59.067 47.826 0.00 0.00 0.00 2.92
138 139 3.055385 TCTTCAAACCTTCCCAGTATCGG 60.055 47.826 0.00 0.00 0.00 4.18
139 140 2.542550 TCAAACCTTCCCAGTATCGGA 58.457 47.619 0.00 0.00 0.00 4.55
140 141 2.907696 TCAAACCTTCCCAGTATCGGAA 59.092 45.455 0.00 0.00 37.04 4.30
141 142 3.521937 TCAAACCTTCCCAGTATCGGAAT 59.478 43.478 0.00 0.00 38.69 3.01
142 143 4.018779 TCAAACCTTCCCAGTATCGGAATT 60.019 41.667 0.00 0.00 38.69 2.17
143 144 4.586306 AACCTTCCCAGTATCGGAATTT 57.414 40.909 0.00 0.00 38.69 1.82
144 145 3.886123 ACCTTCCCAGTATCGGAATTTG 58.114 45.455 0.00 0.00 38.69 2.32
145 146 2.618709 CCTTCCCAGTATCGGAATTTGC 59.381 50.000 0.00 0.00 38.69 3.68
146 147 3.545703 CTTCCCAGTATCGGAATTTGCT 58.454 45.455 0.00 0.00 38.69 3.91
147 148 3.644966 TCCCAGTATCGGAATTTGCTT 57.355 42.857 0.00 0.00 0.00 3.91
148 149 3.963129 TCCCAGTATCGGAATTTGCTTT 58.037 40.909 0.00 0.00 0.00 3.51
149 150 4.340617 TCCCAGTATCGGAATTTGCTTTT 58.659 39.130 0.00 0.00 0.00 2.27
150 151 4.770010 TCCCAGTATCGGAATTTGCTTTTT 59.230 37.500 0.00 0.00 0.00 1.94
151 152 5.102313 CCCAGTATCGGAATTTGCTTTTTC 58.898 41.667 0.00 0.00 0.00 2.29
152 153 5.105756 CCCAGTATCGGAATTTGCTTTTTCT 60.106 40.000 0.00 0.00 0.00 2.52
153 154 6.030228 CCAGTATCGGAATTTGCTTTTTCTC 58.970 40.000 0.00 0.00 0.00 2.87
154 155 5.734498 CAGTATCGGAATTTGCTTTTTCTCG 59.266 40.000 0.00 0.00 0.00 4.04
155 156 3.552604 TCGGAATTTGCTTTTTCTCGG 57.447 42.857 0.00 0.00 0.00 4.63
156 157 2.882137 TCGGAATTTGCTTTTTCTCGGT 59.118 40.909 0.00 0.00 0.00 4.69
157 158 2.979813 CGGAATTTGCTTTTTCTCGGTG 59.020 45.455 0.00 0.00 0.00 4.94
158 159 3.550030 CGGAATTTGCTTTTTCTCGGTGT 60.550 43.478 0.00 0.00 0.00 4.16
159 160 4.368315 GGAATTTGCTTTTTCTCGGTGTT 58.632 39.130 0.00 0.00 0.00 3.32
160 161 4.808895 GGAATTTGCTTTTTCTCGGTGTTT 59.191 37.500 0.00 0.00 0.00 2.83
161 162 5.293324 GGAATTTGCTTTTTCTCGGTGTTTT 59.707 36.000 0.00 0.00 0.00 2.43
162 163 6.183360 GGAATTTGCTTTTTCTCGGTGTTTTT 60.183 34.615 0.00 0.00 0.00 1.94
239 240 9.757227 ATTTTCGAAATCCATAAGTGTTTTTGA 57.243 25.926 12.12 0.00 0.00 2.69
240 241 9.587772 TTTTCGAAATCCATAAGTGTTTTTGAA 57.412 25.926 12.12 0.00 32.62 2.69
241 242 9.757227 TTTCGAAATCCATAAGTGTTTTTGAAT 57.243 25.926 6.47 0.00 33.52 2.57
242 243 9.757227 TTCGAAATCCATAAGTGTTTTTGAATT 57.243 25.926 0.00 0.00 31.17 2.17
243 244 9.757227 TCGAAATCCATAAGTGTTTTTGAATTT 57.243 25.926 0.00 0.00 0.00 1.82
249 250 9.528018 TCCATAAGTGTTTTTGAATTTTCTGAC 57.472 29.630 0.00 0.00 0.00 3.51
250 251 9.311916 CCATAAGTGTTTTTGAATTTTCTGACA 57.688 29.630 0.00 0.00 0.00 3.58
277 278 5.683876 TTGGAAACCAGGAACATTTTTCA 57.316 34.783 0.00 0.00 33.81 2.69
278 279 5.683876 TGGAAACCAGGAACATTTTTCAA 57.316 34.783 0.00 0.00 0.00 2.69
279 280 6.054860 TGGAAACCAGGAACATTTTTCAAA 57.945 33.333 0.00 0.00 0.00 2.69
280 281 6.657875 TGGAAACCAGGAACATTTTTCAAAT 58.342 32.000 0.00 0.00 0.00 2.32
282 283 6.765512 GGAAACCAGGAACATTTTTCAAATCA 59.234 34.615 0.00 0.00 0.00 2.57
283 284 7.254761 GGAAACCAGGAACATTTTTCAAATCAC 60.255 37.037 0.00 0.00 0.00 3.06
284 285 6.232581 ACCAGGAACATTTTTCAAATCACA 57.767 33.333 0.00 0.00 0.00 3.58
285 286 6.829849 ACCAGGAACATTTTTCAAATCACAT 58.170 32.000 0.00 0.00 0.00 3.21
286 287 7.961351 ACCAGGAACATTTTTCAAATCACATA 58.039 30.769 0.00 0.00 0.00 2.29
287 288 8.428063 ACCAGGAACATTTTTCAAATCACATAA 58.572 29.630 0.00 0.00 0.00 1.90
288 289 8.711457 CCAGGAACATTTTTCAAATCACATAAC 58.289 33.333 0.00 0.00 0.00 1.89
289 290 9.480053 CAGGAACATTTTTCAAATCACATAACT 57.520 29.630 0.00 0.00 0.00 2.24
324 325 8.961634 TCATGAATATTTTCAAATTACCGGACA 58.038 29.630 9.46 0.00 44.70 4.02
325 326 9.579768 CATGAATATTTTCAAATTACCGGACAA 57.420 29.630 9.46 1.15 44.70 3.18
328 329 9.634163 GAATATTTTCAAATTACCGGACAACTT 57.366 29.630 9.46 0.00 0.00 2.66
332 333 7.527084 TTTCAAATTACCGGACAACTTTTTG 57.473 32.000 9.46 9.65 38.83 2.44
336 337 7.650104 TCAAATTACCGGACAACTTTTTGAATC 59.350 33.333 9.46 0.00 36.48 2.52
337 338 6.894339 ATTACCGGACAACTTTTTGAATCT 57.106 33.333 9.46 0.00 36.48 2.40
338 339 4.568152 ACCGGACAACTTTTTGAATCTG 57.432 40.909 9.46 0.00 36.48 2.90
340 341 4.202010 ACCGGACAACTTTTTGAATCTGTG 60.202 41.667 9.46 0.00 36.48 3.66
341 342 4.036262 CCGGACAACTTTTTGAATCTGTGA 59.964 41.667 0.00 0.00 36.48 3.58
343 344 5.455525 CGGACAACTTTTTGAATCTGTGAAC 59.544 40.000 0.00 0.00 36.48 3.18
344 345 6.329496 GGACAACTTTTTGAATCTGTGAACA 58.671 36.000 0.00 0.00 36.48 3.18
346 347 7.043192 GGACAACTTTTTGAATCTGTGAACATG 60.043 37.037 0.00 0.00 36.48 3.21
347 348 7.322664 ACAACTTTTTGAATCTGTGAACATGT 58.677 30.769 0.00 0.00 36.48 3.21
349 350 7.992180 ACTTTTTGAATCTGTGAACATGTTC 57.008 32.000 28.10 28.10 39.91 3.18
357 358 9.897744 TGAATCTGTGAACATGTTCTAAAATTC 57.102 29.630 32.57 29.61 40.14 2.17
358 359 9.897744 GAATCTGTGAACATGTTCTAAAATTCA 57.102 29.630 32.57 19.55 40.14 2.57
360 361 8.675705 TCTGTGAACATGTTCTAAAATTCAGA 57.324 30.769 32.57 26.28 40.14 3.27
361 362 9.119418 TCTGTGAACATGTTCTAAAATTCAGAA 57.881 29.630 32.57 10.72 40.14 3.02
363 364 9.515020 TGTGAACATGTTCTAAAATTCAGAAAC 57.485 29.630 32.57 20.14 40.14 2.78
364 365 9.736023 GTGAACATGTTCTAAAATTCAGAAACT 57.264 29.630 32.57 0.00 40.14 2.66
378 379 9.571810 AAATTCAGAAACTTTTTGGAAATTTGC 57.428 25.926 2.22 2.22 0.00 3.68
379 380 7.920160 TTCAGAAACTTTTTGGAAATTTGCT 57.080 28.000 11.22 0.00 0.00 3.91
380 381 9.612066 ATTCAGAAACTTTTTGGAAATTTGCTA 57.388 25.926 11.22 0.05 26.11 3.49
381 382 9.442047 TTCAGAAACTTTTTGGAAATTTGCTAA 57.558 25.926 11.22 6.85 26.11 3.09
382 383 8.878769 TCAGAAACTTTTTGGAAATTTGCTAAC 58.121 29.630 11.22 0.00 26.11 2.34
383 384 8.663911 CAGAAACTTTTTGGAAATTTGCTAACA 58.336 29.630 11.22 2.26 26.11 2.41
384 385 9.394767 AGAAACTTTTTGGAAATTTGCTAACAT 57.605 25.926 11.22 0.00 25.42 2.71
463 464 8.761575 TTTTGATCTTATGTTTCTCAATTGGC 57.238 30.769 5.42 0.00 0.00 4.52
464 465 7.465353 TTGATCTTATGTTTCTCAATTGGCA 57.535 32.000 5.42 0.00 0.00 4.92
465 466 7.465353 TGATCTTATGTTTCTCAATTGGCAA 57.535 32.000 0.68 0.68 0.00 4.52
466 467 7.894708 TGATCTTATGTTTCTCAATTGGCAAA 58.105 30.769 3.01 2.29 0.00 3.68
467 468 8.533657 TGATCTTATGTTTCTCAATTGGCAAAT 58.466 29.630 3.01 0.00 0.00 2.32
475 476 9.118300 TGTTTCTCAATTGGCAAATATTTTTGT 57.882 25.926 3.01 0.00 43.43 2.83
482 483 9.475505 CAATTGGCAAATATTTTTGTATTCACG 57.524 29.630 3.01 0.00 43.43 4.35
483 484 8.994429 ATTGGCAAATATTTTTGTATTCACGA 57.006 26.923 3.01 0.00 43.43 4.35
484 485 8.818141 TTGGCAAATATTTTTGTATTCACGAA 57.182 26.923 9.87 0.00 43.43 3.85
485 486 8.233692 TGGCAAATATTTTTGTATTCACGAAC 57.766 30.769 9.87 0.00 43.43 3.95
486 487 7.867909 TGGCAAATATTTTTGTATTCACGAACA 59.132 29.630 9.87 0.00 43.43 3.18
487 488 8.868916 GGCAAATATTTTTGTATTCACGAACAT 58.131 29.630 9.87 0.00 43.43 2.71
498 499 9.781834 TTGTATTCACGAACATATTTTGAATCC 57.218 29.630 0.00 0.00 37.86 3.01
499 500 8.951243 TGTATTCACGAACATATTTTGAATCCA 58.049 29.630 0.00 0.00 37.86 3.41
500 501 9.221775 GTATTCACGAACATATTTTGAATCCAC 57.778 33.333 0.00 0.00 37.86 4.02
501 502 7.447374 TTCACGAACATATTTTGAATCCACT 57.553 32.000 0.00 0.00 0.00 4.00
502 503 6.841119 TCACGAACATATTTTGAATCCACTG 58.159 36.000 0.00 0.00 0.00 3.66
503 504 6.652900 TCACGAACATATTTTGAATCCACTGA 59.347 34.615 0.00 0.00 0.00 3.41
504 505 6.742718 CACGAACATATTTTGAATCCACTGAC 59.257 38.462 0.00 0.00 0.00 3.51
505 506 6.429692 ACGAACATATTTTGAATCCACTGACA 59.570 34.615 0.00 0.00 0.00 3.58
506 507 7.121168 ACGAACATATTTTGAATCCACTGACAT 59.879 33.333 0.00 0.00 0.00 3.06
507 508 7.970061 CGAACATATTTTGAATCCACTGACATT 59.030 33.333 0.00 0.00 0.00 2.71
508 509 9.643693 GAACATATTTTGAATCCACTGACATTT 57.356 29.630 0.00 0.00 0.00 2.32
518 519 9.642327 TGAATCCACTGACATTTTATGAAATTG 57.358 29.630 0.00 0.00 33.25 2.32
519 520 9.859427 GAATCCACTGACATTTTATGAAATTGA 57.141 29.630 0.00 0.00 33.25 2.57
573 574 9.587772 TTTTTGAATTCGTGGAACATTCTTTAA 57.412 25.926 0.04 0.00 44.52 1.52
574 575 9.757227 TTTTGAATTCGTGGAACATTCTTTAAT 57.243 25.926 0.04 0.00 44.52 1.40
575 576 9.757227 TTTGAATTCGTGGAACATTCTTTAATT 57.243 25.926 0.04 0.00 44.52 1.40
576 577 9.757227 TTGAATTCGTGGAACATTCTTTAATTT 57.243 25.926 0.04 0.00 44.52 1.82
577 578 9.405587 TGAATTCGTGGAACATTCTTTAATTTC 57.594 29.630 0.04 0.00 44.52 2.17
578 579 9.405587 GAATTCGTGGAACATTCTTTAATTTCA 57.594 29.630 0.00 0.00 44.52 2.69
579 580 9.927668 AATTCGTGGAACATTCTTTAATTTCAT 57.072 25.926 0.00 0.00 44.52 2.57
580 581 9.927668 ATTCGTGGAACATTCTTTAATTTCATT 57.072 25.926 0.00 0.00 44.52 2.57
671 672 9.922305 CAATTATTTTAAGAGGATCGACTGAAC 57.078 33.333 0.00 0.00 42.67 3.18
736 738 9.916360 AAAAATACTCCCTCCGTTTCTAAATAT 57.084 29.630 0.00 0.00 0.00 1.28
737 739 9.916360 AAAATACTCCCTCCGTTTCTAAATATT 57.084 29.630 0.00 0.00 0.00 1.28
738 740 9.916360 AAATACTCCCTCCGTTTCTAAATATTT 57.084 29.630 5.89 5.89 0.00 1.40
739 741 8.904099 ATACTCCCTCCGTTTCTAAATATTTG 57.096 34.615 11.05 1.65 0.00 2.32
740 742 6.718294 ACTCCCTCCGTTTCTAAATATTTGT 58.282 36.000 11.05 0.00 0.00 2.83
741 743 6.822170 ACTCCCTCCGTTTCTAAATATTTGTC 59.178 38.462 11.05 0.00 0.00 3.18
742 744 6.954232 TCCCTCCGTTTCTAAATATTTGTCT 58.046 36.000 11.05 0.00 0.00 3.41
743 745 7.399634 TCCCTCCGTTTCTAAATATTTGTCTT 58.600 34.615 11.05 0.00 0.00 3.01
744 746 7.886446 TCCCTCCGTTTCTAAATATTTGTCTTT 59.114 33.333 11.05 0.00 0.00 2.52
745 747 8.182227 CCCTCCGTTTCTAAATATTTGTCTTTC 58.818 37.037 11.05 0.00 0.00 2.62
746 748 8.947115 CCTCCGTTTCTAAATATTTGTCTTTCT 58.053 33.333 11.05 0.00 0.00 2.52
768 770 8.709386 TTCTAGAGATTTCAATAAGTGACTGC 57.291 34.615 0.00 0.00 35.39 4.40
769 771 7.840931 TCTAGAGATTTCAATAAGTGACTGCA 58.159 34.615 0.00 0.00 35.39 4.41
770 772 8.481314 TCTAGAGATTTCAATAAGTGACTGCAT 58.519 33.333 0.00 0.00 35.39 3.96
771 773 9.755804 CTAGAGATTTCAATAAGTGACTGCATA 57.244 33.333 0.00 0.00 35.39 3.14
772 774 8.430801 AGAGATTTCAATAAGTGACTGCATAC 57.569 34.615 0.00 0.00 35.39 2.39
773 775 7.223582 AGAGATTTCAATAAGTGACTGCATACG 59.776 37.037 0.00 0.00 35.39 3.06
774 776 7.041721 AGATTTCAATAAGTGACTGCATACGA 58.958 34.615 0.00 0.00 35.39 3.43
775 777 7.549134 AGATTTCAATAAGTGACTGCATACGAA 59.451 33.333 0.00 0.00 35.39 3.85
776 778 6.647212 TTCAATAAGTGACTGCATACGAAG 57.353 37.500 0.00 0.00 35.39 3.79
777 779 4.566759 TCAATAAGTGACTGCATACGAAGC 59.433 41.667 0.00 0.00 0.00 3.86
778 780 2.455674 AAGTGACTGCATACGAAGCA 57.544 45.000 0.00 0.00 40.19 3.91
779 781 2.455674 AGTGACTGCATACGAAGCAA 57.544 45.000 0.00 0.00 42.17 3.91
780 782 2.766313 AGTGACTGCATACGAAGCAAA 58.234 42.857 0.00 0.00 42.17 3.68
781 783 3.138304 AGTGACTGCATACGAAGCAAAA 58.862 40.909 0.00 0.00 42.17 2.44
782 784 3.753272 AGTGACTGCATACGAAGCAAAAT 59.247 39.130 0.00 0.00 42.17 1.82
783 785 3.848019 GTGACTGCATACGAAGCAAAATG 59.152 43.478 0.00 0.00 42.17 2.32
784 786 3.750652 TGACTGCATACGAAGCAAAATGA 59.249 39.130 0.00 0.00 42.17 2.57
785 787 4.142838 TGACTGCATACGAAGCAAAATGAG 60.143 41.667 0.00 0.00 42.17 2.90
786 788 3.753272 ACTGCATACGAAGCAAAATGAGT 59.247 39.130 0.00 0.00 42.17 3.41
787 789 4.082274 TGCATACGAAGCAAAATGAGTG 57.918 40.909 0.00 0.00 39.39 3.51
788 790 3.750652 TGCATACGAAGCAAAATGAGTGA 59.249 39.130 0.00 0.00 39.39 3.41
789 791 4.215185 TGCATACGAAGCAAAATGAGTGAA 59.785 37.500 0.00 0.00 39.39 3.18
790 792 5.106197 TGCATACGAAGCAAAATGAGTGAAT 60.106 36.000 0.00 0.00 39.39 2.57
791 793 5.453587 GCATACGAAGCAAAATGAGTGAATC 59.546 40.000 0.00 0.00 0.00 2.52
792 794 6.676456 GCATACGAAGCAAAATGAGTGAATCT 60.676 38.462 0.00 0.00 0.00 2.40
793 795 7.465916 GCATACGAAGCAAAATGAGTGAATCTA 60.466 37.037 0.00 0.00 0.00 1.98
794 796 6.170675 ACGAAGCAAAATGAGTGAATCTAC 57.829 37.500 0.00 0.00 0.00 2.59
795 797 5.700832 ACGAAGCAAAATGAGTGAATCTACA 59.299 36.000 0.00 0.00 0.00 2.74
796 798 6.017933 CGAAGCAAAATGAGTGAATCTACAC 58.982 40.000 0.00 0.00 40.60 2.90
832 834 9.135189 TGTTTATATAGGTTCGTATGTGGTAGT 57.865 33.333 0.00 0.00 0.00 2.73
833 835 9.617975 GTTTATATAGGTTCGTATGTGGTAGTC 57.382 37.037 0.00 0.00 0.00 2.59
834 836 9.578576 TTTATATAGGTTCGTATGTGGTAGTCT 57.421 33.333 0.00 0.00 0.00 3.24
837 839 9.750783 ATATAGGTTCGTATGTGGTAGTCTATT 57.249 33.333 0.00 0.00 0.00 1.73
838 840 6.786967 AGGTTCGTATGTGGTAGTCTATTT 57.213 37.500 0.00 0.00 0.00 1.40
839 841 6.570692 AGGTTCGTATGTGGTAGTCTATTTG 58.429 40.000 0.00 0.00 0.00 2.32
840 842 6.379133 AGGTTCGTATGTGGTAGTCTATTTGA 59.621 38.462 0.00 0.00 0.00 2.69
841 843 7.037438 GGTTCGTATGTGGTAGTCTATTTGAA 58.963 38.462 0.00 0.00 0.00 2.69
842 844 7.546667 GGTTCGTATGTGGTAGTCTATTTGAAA 59.453 37.037 0.00 0.00 0.00 2.69
843 845 9.095065 GTTCGTATGTGGTAGTCTATTTGAAAT 57.905 33.333 0.00 0.00 0.00 2.17
844 846 9.661563 TTCGTATGTGGTAGTCTATTTGAAATT 57.338 29.630 0.00 0.00 0.00 1.82
845 847 9.661563 TCGTATGTGGTAGTCTATTTGAAATTT 57.338 29.630 0.00 0.00 0.00 1.82
876 878 9.807921 AAAGACAAATATTTAGGAACTGAAGGA 57.192 29.630 0.00 0.00 37.36 3.36
877 879 9.454859 AAGACAAATATTTAGGAACTGAAGGAG 57.545 33.333 0.00 0.00 37.36 3.69
878 880 8.606830 AGACAAATATTTAGGAACTGAAGGAGT 58.393 33.333 0.00 0.00 37.36 3.85
879 881 9.886132 GACAAATATTTAGGAACTGAAGGAGTA 57.114 33.333 0.00 0.00 37.36 2.59
907 910 4.442706 CATTGTACTCCGGGATATATGGC 58.557 47.826 0.00 0.00 0.00 4.40
961 964 1.502990 CGTGTTTGCGGGACACATGA 61.503 55.000 14.67 0.00 45.88 3.07
963 966 0.179032 TGTTTGCGGGACACATGAGT 60.179 50.000 0.00 0.00 0.00 3.41
964 967 1.070914 TGTTTGCGGGACACATGAGTA 59.929 47.619 0.00 0.00 0.00 2.59
990 997 3.186047 CCCTAACGCACGCTTCCG 61.186 66.667 0.00 0.00 41.14 4.30
1127 1164 1.370900 GCACTGCTTCTGCGTTTGG 60.371 57.895 0.00 0.00 43.34 3.28
1128 1165 2.024918 CACTGCTTCTGCGTTTGGT 58.975 52.632 0.00 0.00 43.34 3.67
1319 1379 2.163613 CCCGCTGGTAATTTGGTCTTTC 59.836 50.000 0.00 0.00 0.00 2.62
1413 1482 5.807520 GGAGTGTTCATGTGAGTATGTGTAG 59.192 44.000 0.00 0.00 0.00 2.74
1499 1572 9.538508 TCTGATTGTCACTATAGATGATTTGTG 57.461 33.333 6.78 0.00 0.00 3.33
1542 1617 9.283768 TCTCTTTTGTTAGATTGTTAAGCATCA 57.716 29.630 0.00 0.00 0.00 3.07
1588 1722 5.433526 AGCAACTGGGCTTTATTTCGTATA 58.566 37.500 0.00 0.00 42.71 1.47
1589 1723 5.296035 AGCAACTGGGCTTTATTTCGTATAC 59.704 40.000 0.00 0.00 42.71 1.47
1590 1724 5.505159 GCAACTGGGCTTTATTTCGTATACC 60.505 44.000 0.00 0.00 0.00 2.73
1688 1847 2.238521 GGTTTGCTTCAATCCACTCCA 58.761 47.619 2.68 0.00 34.43 3.86
1713 1872 2.654877 CCGTTCCTACAGTGCCGT 59.345 61.111 0.00 0.00 0.00 5.68
1715 1874 1.445582 CGTTCCTACAGTGCCGTCC 60.446 63.158 0.00 0.00 0.00 4.79
1717 1876 0.249398 GTTCCTACAGTGCCGTCCAT 59.751 55.000 0.00 0.00 0.00 3.41
1721 1880 0.179100 CTACAGTGCCGTCCATGAGG 60.179 60.000 0.00 0.00 0.00 3.86
1802 1962 2.766828 GTCCCATACTGCTAACTGACCT 59.233 50.000 0.00 0.00 0.00 3.85
1814 1974 4.081087 GCTAACTGACCTGGGAAATGACTA 60.081 45.833 0.00 0.00 0.00 2.59
1853 2013 1.151450 CCAGGGCTGTCACCAAGTT 59.849 57.895 0.00 0.00 0.00 2.66
2093 2268 9.581099 GTGGACAAACATTTTTAGAAAAGAGAA 57.419 29.630 0.00 0.00 0.00 2.87
2126 2301 6.881065 GCAGAACATAAGGGAATATGCATCTA 59.119 38.462 0.19 0.00 36.87 1.98
2127 2302 7.555554 GCAGAACATAAGGGAATATGCATCTAT 59.444 37.037 0.19 0.00 36.87 1.98
2152 2327 2.379907 TGGGGAAAGCTTCAATTCTCCT 59.620 45.455 14.49 0.00 44.92 3.69
2184 2366 8.528643 TCTCTTAATCAGTTCGGAAATTCAGTA 58.471 33.333 0.00 0.00 0.00 2.74
2227 2409 7.589587 CGATGTACTCATCTATTCAGTCAGTTC 59.410 40.741 6.64 0.00 45.76 3.01
2243 2428 6.253727 CAGTCAGTTCGGTTTATCTGTATGAC 59.746 42.308 0.00 0.00 34.17 3.06
2416 2643 6.127563 TGTTATACATTTCGCTCCACTACTGA 60.128 38.462 0.00 0.00 0.00 3.41
2591 2826 3.096489 TGCCAAGATTTTGTTCACAGC 57.904 42.857 0.00 0.00 32.21 4.40
2764 3000 6.418819 GGCTGCTCGACGTATAAAGTAATTTA 59.581 38.462 0.00 0.00 0.00 1.40
2797 3033 3.540314 TGCCATCCATTTATGTTTGCC 57.460 42.857 0.00 0.00 0.00 4.52
2900 4461 5.390387 TGCCTAAAAGGGTCACTACATTTT 58.610 37.500 0.00 0.00 35.37 1.82
3102 4684 6.769134 AGTTTGCCACTTAGTTAGTTTGTT 57.231 33.333 0.00 0.00 33.85 2.83
3240 5076 5.027460 TGCCTCAAGTGGGTAATCTAGTTA 58.973 41.667 0.00 0.00 0.00 2.24
3241 5077 5.665812 TGCCTCAAGTGGGTAATCTAGTTAT 59.334 40.000 0.00 0.00 0.00 1.89
3266 5102 0.721718 CTAGCCGTTGTGCTACTTGC 59.278 55.000 0.00 0.00 42.75 4.01
3269 5105 1.207593 CCGTTGTGCTACTTGCTGC 59.792 57.895 0.00 0.00 43.37 5.25
3270 5106 1.506309 CCGTTGTGCTACTTGCTGCA 61.506 55.000 0.00 0.00 43.37 4.41
3379 5219 8.179615 CCTCGTTGAGGTTTTATACATTTTACC 58.820 37.037 4.65 0.00 44.25 2.85
3518 5358 4.564782 AGGGTTTACAAGGTAACCTAGC 57.435 45.455 0.00 0.00 42.72 3.42
3556 5398 7.216494 ACTTATTGTTTGCTAATTGGTTTGCT 58.784 30.769 0.00 0.00 37.06 3.91
3849 6752 3.702045 ACAGTTAAGGGAGAGATCCTTCG 59.298 47.826 0.00 0.00 43.02 3.79
3861 6764 2.838202 AGATCCTTCGCCCTTTAACTCA 59.162 45.455 0.00 0.00 0.00 3.41
4181 7119 3.753272 GCATATCGGTTGTTATGGATGCT 59.247 43.478 0.00 0.00 36.40 3.79
4236 7175 7.289549 ACATAGTCTAATAAGGACTTGGGGTAC 59.710 40.741 1.72 0.00 42.96 3.34
4239 7178 6.070366 AGTCTAATAAGGACTTGGGGTACAAC 60.070 42.308 0.00 0.00 40.65 3.32
4240 7179 4.311520 AATAAGGACTTGGGGTACAACC 57.688 45.455 0.00 0.00 37.60 3.77
4241 7180 0.399075 AAGGACTTGGGGTACAACCG 59.601 55.000 0.00 0.00 39.83 4.44
4242 7181 0.765519 AGGACTTGGGGTACAACCGT 60.766 55.000 0.00 0.00 39.83 4.83
4243 7182 0.975887 GGACTTGGGGTACAACCGTA 59.024 55.000 0.00 0.00 39.83 4.02
4244 7183 1.338105 GGACTTGGGGTACAACCGTAC 60.338 57.143 0.00 0.00 46.18 3.67
4256 7195 3.725490 ACAACCGTACAAGGAAAGAGAC 58.275 45.455 0.00 0.00 34.73 3.36
4288 7227 7.842887 AATAAGGACTCCTAGACCAATACTC 57.157 40.000 0.00 0.00 32.35 2.59
4289 7228 5.475398 AAGGACTCCTAGACCAATACTCT 57.525 43.478 0.00 0.00 32.35 3.24
4290 7229 6.593759 AAGGACTCCTAGACCAATACTCTA 57.406 41.667 0.00 0.00 32.35 2.43
4292 7231 7.169287 AGGACTCCTAGACCAATACTCTAAT 57.831 40.000 0.00 0.00 32.35 1.73
4293 7232 8.290463 AGGACTCCTAGACCAATACTCTAATA 57.710 38.462 0.00 0.00 32.35 0.98
4295 7234 8.165397 GGACTCCTAGACCAATACTCTAATACT 58.835 40.741 0.00 0.00 30.29 2.12
4296 7235 9.223099 GACTCCTAGACCAATACTCTAATACTC 57.777 40.741 0.00 0.00 0.00 2.59
4297 7236 8.165397 ACTCCTAGACCAATACTCTAATACTCC 58.835 40.741 0.00 0.00 0.00 3.85
4298 7237 7.468496 TCCTAGACCAATACTCTAATACTCCC 58.532 42.308 0.00 0.00 0.00 4.30
4435 8441 8.809468 ACATCAGTTTAGTATGTACTCAGAGA 57.191 34.615 3.79 0.00 37.73 3.10
4495 8501 7.147312 TGATTGCATCAGGAACTAAAACAAAG 58.853 34.615 0.00 0.00 36.02 2.77
4511 8517 3.744660 ACAAAGCAGAGGTGTAGGAAAG 58.255 45.455 0.00 0.00 0.00 2.62
4752 8850 5.082251 TGAAGACTGAAGATGGTGATGAG 57.918 43.478 0.00 0.00 0.00 2.90
5186 9288 0.031616 AGGGCGAGGAAGAGGAAGAT 60.032 55.000 0.00 0.00 0.00 2.40
5195 9297 0.325671 AAGAGGAAGATGGCGAGGGA 60.326 55.000 0.00 0.00 0.00 4.20
5311 9444 6.019318 ACGATTTGACTATTTTAATCCCGTCG 60.019 38.462 0.00 0.00 0.00 5.12
5446 9591 3.941188 CGTGTGTGGAGCCACCCT 61.941 66.667 16.50 0.00 45.63 4.34
5623 9770 8.449251 AACAATGAAAGCAAAATTGGTGTATT 57.551 26.923 0.00 0.00 39.13 1.89
5660 9816 5.734855 TCTACAACTGAAAAAGCACTCAC 57.265 39.130 0.00 0.00 0.00 3.51
5661 9817 3.405170 ACAACTGAAAAAGCACTCACG 57.595 42.857 0.00 0.00 0.00 4.35
5852 10851 0.735978 GCCAGCCAACGCCATTTAAC 60.736 55.000 0.00 0.00 34.57 2.01
6240 11473 1.282157 GTCCCTGTCCCTAGTTGCATT 59.718 52.381 0.00 0.00 0.00 3.56
6333 11567 1.384222 AAAAATCATCCTCGCCGCCC 61.384 55.000 0.00 0.00 0.00 6.13
6562 11844 1.833630 ACGCATTGGAGGATGAGAGAA 59.166 47.619 0.00 0.00 32.15 2.87
6649 11933 7.437862 ACAACGCAAACAATTAATGAATCTGTT 59.562 29.630 0.00 0.00 32.46 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
9 10 1.153823 CCACACTTACGGGCGAGAG 60.154 63.158 0.00 0.00 0.00 3.20
11 12 1.445582 GTCCACACTTACGGGCGAG 60.446 63.158 0.00 0.00 0.00 5.03
15 16 1.071071 TCTTTGGTCCACACTTACGGG 59.929 52.381 0.00 0.00 0.00 5.28
19 20 2.808933 CGGCTTCTTTGGTCCACACTTA 60.809 50.000 0.00 0.00 0.00 2.24
20 21 1.692411 GGCTTCTTTGGTCCACACTT 58.308 50.000 0.00 0.00 0.00 3.16
21 22 0.535102 CGGCTTCTTTGGTCCACACT 60.535 55.000 0.00 0.00 0.00 3.55
23 24 1.896660 GCGGCTTCTTTGGTCCACA 60.897 57.895 0.00 0.00 0.00 4.17
24 25 1.578206 GAGCGGCTTCTTTGGTCCAC 61.578 60.000 2.97 0.00 0.00 4.02
25 26 1.302511 GAGCGGCTTCTTTGGTCCA 60.303 57.895 2.97 0.00 0.00 4.02
26 27 1.301677 CTGAGCGGCTTCTTTGGTCC 61.302 60.000 2.97 0.00 0.00 4.46
28 29 0.886490 CACTGAGCGGCTTCTTTGGT 60.886 55.000 2.97 0.00 0.00 3.67
29 30 1.871772 CACTGAGCGGCTTCTTTGG 59.128 57.895 2.97 0.00 0.00 3.28
40 41 0.179111 TAGGCATGTACGCACTGAGC 60.179 55.000 0.00 0.00 40.87 4.26
41 42 2.515926 ATAGGCATGTACGCACTGAG 57.484 50.000 0.00 0.00 0.00 3.35
42 43 3.572255 TCATATAGGCATGTACGCACTGA 59.428 43.478 0.00 0.00 0.00 3.41
43 44 3.913089 TCATATAGGCATGTACGCACTG 58.087 45.455 0.00 0.00 0.00 3.66
44 45 3.615110 GCTCATATAGGCATGTACGCACT 60.615 47.826 0.00 0.00 0.00 4.40
45 46 2.668457 GCTCATATAGGCATGTACGCAC 59.332 50.000 0.00 0.00 0.00 5.34
46 47 2.959516 GCTCATATAGGCATGTACGCA 58.040 47.619 0.00 0.00 0.00 5.24
57 58 2.026822 AGAAATGGGCCGGCTCATATAG 60.027 50.000 40.90 0.00 35.85 1.31
59 60 0.773644 AGAAATGGGCCGGCTCATAT 59.226 50.000 40.90 26.53 35.85 1.78
61 62 1.454479 CAGAAATGGGCCGGCTCAT 60.454 57.895 36.42 36.42 39.10 2.90
62 63 2.045045 CAGAAATGGGCCGGCTCA 60.045 61.111 35.14 35.14 0.00 4.26
63 64 2.830370 CCAGAAATGGGCCGGCTC 60.830 66.667 28.56 25.91 0.00 4.70
64 65 4.447342 CCCAGAAATGGGCCGGCT 62.447 66.667 28.56 5.35 42.99 5.52
71 72 5.990120 AGAACAGAAATTCCCAGAAATGG 57.010 39.130 0.00 0.00 0.00 3.16
72 73 8.667076 AAAAAGAACAGAAATTCCCAGAAATG 57.333 30.769 0.00 0.00 0.00 2.32
73 74 9.764363 GTAAAAAGAACAGAAATTCCCAGAAAT 57.236 29.630 0.00 0.00 0.00 2.17
74 75 8.201464 GGTAAAAAGAACAGAAATTCCCAGAAA 58.799 33.333 0.00 0.00 0.00 2.52
75 76 7.343316 TGGTAAAAAGAACAGAAATTCCCAGAA 59.657 33.333 0.00 0.00 0.00 3.02
76 77 6.836527 TGGTAAAAAGAACAGAAATTCCCAGA 59.163 34.615 0.00 0.00 0.00 3.86
77 78 6.923508 GTGGTAAAAAGAACAGAAATTCCCAG 59.076 38.462 0.00 0.00 0.00 4.45
78 79 6.609616 AGTGGTAAAAAGAACAGAAATTCCCA 59.390 34.615 0.00 0.00 0.00 4.37
79 80 6.923508 CAGTGGTAAAAAGAACAGAAATTCCC 59.076 38.462 0.00 0.00 0.00 3.97
80 81 6.923508 CCAGTGGTAAAAAGAACAGAAATTCC 59.076 38.462 0.00 0.00 0.00 3.01
81 82 7.489160 ACCAGTGGTAAAAAGAACAGAAATTC 58.511 34.615 14.87 0.00 32.11 2.17
83 84 7.418337 AACCAGTGGTAAAAAGAACAGAAAT 57.582 32.000 17.09 0.00 33.12 2.17
84 85 6.844097 AACCAGTGGTAAAAAGAACAGAAA 57.156 33.333 17.09 0.00 33.12 2.52
86 87 6.350612 CCAAAACCAGTGGTAAAAAGAACAGA 60.351 38.462 17.09 0.00 33.12 3.41
87 88 5.810074 CCAAAACCAGTGGTAAAAAGAACAG 59.190 40.000 17.09 0.00 33.12 3.16
88 89 5.337652 CCCAAAACCAGTGGTAAAAAGAACA 60.338 40.000 17.09 0.00 33.12 3.18
89 90 5.105269 TCCCAAAACCAGTGGTAAAAAGAAC 60.105 40.000 17.09 0.00 33.12 3.01
90 91 5.024118 TCCCAAAACCAGTGGTAAAAAGAA 58.976 37.500 17.09 0.00 33.12 2.52
91 92 4.611367 TCCCAAAACCAGTGGTAAAAAGA 58.389 39.130 17.09 7.68 33.12 2.52
92 93 5.105106 ACTTCCCAAAACCAGTGGTAAAAAG 60.105 40.000 17.09 14.88 33.12 2.27
93 94 4.778427 ACTTCCCAAAACCAGTGGTAAAAA 59.222 37.500 17.09 3.99 33.12 1.94
94 95 4.354662 ACTTCCCAAAACCAGTGGTAAAA 58.645 39.130 17.09 3.30 33.12 1.52
95 96 3.955551 GACTTCCCAAAACCAGTGGTAAA 59.044 43.478 17.09 2.95 33.12 2.01
98 99 1.569072 AGACTTCCCAAAACCAGTGGT 59.431 47.619 9.70 9.70 37.65 4.16
100 101 3.287222 TGAAGACTTCCCAAAACCAGTG 58.713 45.455 12.66 0.00 0.00 3.66
101 102 3.662759 TGAAGACTTCCCAAAACCAGT 57.337 42.857 12.66 0.00 0.00 4.00
102 103 4.441495 GGTTTGAAGACTTCCCAAAACCAG 60.441 45.833 27.70 0.00 40.34 4.00
103 104 3.449377 GGTTTGAAGACTTCCCAAAACCA 59.551 43.478 27.70 4.85 40.34 3.67
104 105 3.704566 AGGTTTGAAGACTTCCCAAAACC 59.295 43.478 26.48 26.48 40.65 3.27
105 106 5.339008 AAGGTTTGAAGACTTCCCAAAAC 57.661 39.130 12.66 14.67 37.66 2.43
112 113 3.821748 ACTGGGAAGGTTTGAAGACTTC 58.178 45.455 8.34 8.34 39.80 3.01
113 114 3.953542 ACTGGGAAGGTTTGAAGACTT 57.046 42.857 0.00 0.00 0.00 3.01
114 115 4.322801 CGATACTGGGAAGGTTTGAAGACT 60.323 45.833 0.00 0.00 0.00 3.24
115 116 3.933332 CGATACTGGGAAGGTTTGAAGAC 59.067 47.826 0.00 0.00 0.00 3.01
116 117 3.055385 CCGATACTGGGAAGGTTTGAAGA 60.055 47.826 0.00 0.00 0.00 2.87
117 118 3.055385 TCCGATACTGGGAAGGTTTGAAG 60.055 47.826 0.00 0.00 0.00 3.02
118 119 2.907696 TCCGATACTGGGAAGGTTTGAA 59.092 45.455 0.00 0.00 0.00 2.69
119 120 2.542550 TCCGATACTGGGAAGGTTTGA 58.457 47.619 0.00 0.00 0.00 2.69
121 122 4.586306 AATTCCGATACTGGGAAGGTTT 57.414 40.909 0.00 0.00 46.08 3.27
122 123 4.270008 CAAATTCCGATACTGGGAAGGTT 58.730 43.478 0.00 0.00 46.08 3.50
123 124 3.886123 CAAATTCCGATACTGGGAAGGT 58.114 45.455 0.00 0.00 46.08 3.50
124 125 2.618709 GCAAATTCCGATACTGGGAAGG 59.381 50.000 0.00 0.00 46.08 3.46
126 127 3.644966 AGCAAATTCCGATACTGGGAA 57.355 42.857 0.00 0.00 46.86 3.97
129 130 5.954335 AGAAAAAGCAAATTCCGATACTGG 58.046 37.500 0.00 0.00 0.00 4.00
130 131 5.734498 CGAGAAAAAGCAAATTCCGATACTG 59.266 40.000 0.00 0.00 0.00 2.74
131 132 5.163754 CCGAGAAAAAGCAAATTCCGATACT 60.164 40.000 0.00 0.00 0.00 2.12
132 133 5.028375 CCGAGAAAAAGCAAATTCCGATAC 58.972 41.667 0.00 0.00 0.00 2.24
133 134 4.698304 ACCGAGAAAAAGCAAATTCCGATA 59.302 37.500 0.00 0.00 0.00 2.92
134 135 3.506067 ACCGAGAAAAAGCAAATTCCGAT 59.494 39.130 0.00 0.00 0.00 4.18
135 136 2.882137 ACCGAGAAAAAGCAAATTCCGA 59.118 40.909 0.00 0.00 0.00 4.55
136 137 2.979813 CACCGAGAAAAAGCAAATTCCG 59.020 45.455 0.00 0.00 0.00 4.30
137 138 3.977427 ACACCGAGAAAAAGCAAATTCC 58.023 40.909 0.00 0.00 0.00 3.01
138 139 5.966636 AAACACCGAGAAAAAGCAAATTC 57.033 34.783 0.00 0.00 0.00 2.17
139 140 6.735678 AAAAACACCGAGAAAAAGCAAATT 57.264 29.167 0.00 0.00 0.00 1.82
213 214 9.757227 TCAAAAACACTTATGGATTTCGAAAAT 57.243 25.926 15.66 6.73 0.00 1.82
214 215 9.587772 TTCAAAAACACTTATGGATTTCGAAAA 57.412 25.926 15.66 0.00 0.00 2.29
215 216 9.757227 ATTCAAAAACACTTATGGATTTCGAAA 57.243 25.926 13.91 13.91 0.00 3.46
216 217 9.757227 AATTCAAAAACACTTATGGATTTCGAA 57.243 25.926 0.00 0.00 0.00 3.71
217 218 9.757227 AAATTCAAAAACACTTATGGATTTCGA 57.243 25.926 0.00 0.00 27.23 3.71
223 224 9.528018 GTCAGAAAATTCAAAAACACTTATGGA 57.472 29.630 0.00 0.00 0.00 3.41
224 225 9.311916 TGTCAGAAAATTCAAAAACACTTATGG 57.688 29.630 0.00 0.00 0.00 2.74
252 253 6.942576 TGAAAAATGTTCCTGGTTTCCAAAAA 59.057 30.769 0.00 0.00 30.80 1.94
253 254 6.476378 TGAAAAATGTTCCTGGTTTCCAAAA 58.524 32.000 0.00 0.00 30.80 2.44
254 255 6.054860 TGAAAAATGTTCCTGGTTTCCAAA 57.945 33.333 0.00 0.00 30.80 3.28
255 256 5.683876 TGAAAAATGTTCCTGGTTTCCAA 57.316 34.783 0.00 0.00 30.80 3.53
256 257 5.683876 TTGAAAAATGTTCCTGGTTTCCA 57.316 34.783 0.00 0.00 0.00 3.53
257 258 6.765512 TGATTTGAAAAATGTTCCTGGTTTCC 59.234 34.615 0.00 0.00 0.00 3.13
258 259 7.279758 TGTGATTTGAAAAATGTTCCTGGTTTC 59.720 33.333 0.00 0.00 0.00 2.78
259 260 7.108847 TGTGATTTGAAAAATGTTCCTGGTTT 58.891 30.769 0.00 0.00 0.00 3.27
260 261 6.648192 TGTGATTTGAAAAATGTTCCTGGTT 58.352 32.000 0.00 0.00 0.00 3.67
262 263 8.711457 GTTATGTGATTTGAAAAATGTTCCTGG 58.289 33.333 0.00 0.00 0.00 4.45
297 298 9.796120 GTCCGGTAATTTGAAAATATTCATGAA 57.204 29.630 11.26 11.26 44.70 2.57
298 299 8.961634 TGTCCGGTAATTTGAAAATATTCATGA 58.038 29.630 0.00 0.00 44.70 3.07
300 301 9.581099 GTTGTCCGGTAATTTGAAAATATTCAT 57.419 29.630 0.00 0.00 44.70 2.57
301 302 8.798402 AGTTGTCCGGTAATTTGAAAATATTCA 58.202 29.630 0.00 0.00 43.70 2.57
303 304 9.990360 AAAGTTGTCCGGTAATTTGAAAATATT 57.010 25.926 0.00 0.00 0.00 1.28
304 305 9.990360 AAAAGTTGTCCGGTAATTTGAAAATAT 57.010 25.926 0.00 0.00 0.00 1.28
305 306 9.819267 AAAAAGTTGTCCGGTAATTTGAAAATA 57.181 25.926 0.00 0.00 0.00 1.40
307 308 7.817962 TCAAAAAGTTGTCCGGTAATTTGAAAA 59.182 29.630 0.00 0.00 33.91 2.29
308 309 7.321153 TCAAAAAGTTGTCCGGTAATTTGAAA 58.679 30.769 0.00 0.00 33.91 2.69
309 310 6.864342 TCAAAAAGTTGTCCGGTAATTTGAA 58.136 32.000 0.00 0.00 33.91 2.69
310 311 6.452494 TCAAAAAGTTGTCCGGTAATTTGA 57.548 33.333 0.00 8.90 36.07 2.69
312 313 7.651704 CAGATTCAAAAAGTTGTCCGGTAATTT 59.348 33.333 0.00 0.00 36.07 1.82
313 314 7.145323 CAGATTCAAAAAGTTGTCCGGTAATT 58.855 34.615 0.00 0.00 36.07 1.40
314 315 6.264518 ACAGATTCAAAAAGTTGTCCGGTAAT 59.735 34.615 0.00 0.00 36.07 1.89
316 317 5.008217 CACAGATTCAAAAAGTTGTCCGGTA 59.992 40.000 0.00 0.00 36.07 4.02
317 318 3.951680 ACAGATTCAAAAAGTTGTCCGGT 59.048 39.130 0.00 0.00 36.07 5.28
319 320 5.168526 TCACAGATTCAAAAAGTTGTCCG 57.831 39.130 0.00 0.00 36.07 4.79
320 321 6.329496 TGTTCACAGATTCAAAAAGTTGTCC 58.671 36.000 0.00 0.00 36.07 4.02
321 322 7.489113 ACATGTTCACAGATTCAAAAAGTTGTC 59.511 33.333 0.00 0.00 36.07 3.18
322 323 7.322664 ACATGTTCACAGATTCAAAAAGTTGT 58.677 30.769 0.00 0.00 36.07 3.32
324 325 8.253113 AGAACATGTTCACAGATTCAAAAAGTT 58.747 29.630 33.92 9.74 41.84 2.66
325 326 7.775120 AGAACATGTTCACAGATTCAAAAAGT 58.225 30.769 33.92 10.09 41.84 2.66
332 333 9.897744 TGAATTTTAGAACATGTTCACAGATTC 57.102 29.630 33.92 30.44 41.84 2.52
336 337 9.734620 TTTCTGAATTTTAGAACATGTTCACAG 57.265 29.630 33.92 26.21 41.84 3.66
337 338 9.515020 GTTTCTGAATTTTAGAACATGTTCACA 57.485 29.630 33.92 21.37 41.84 3.58
338 339 9.736023 AGTTTCTGAATTTTAGAACATGTTCAC 57.264 29.630 33.92 20.42 41.84 3.18
353 354 8.959548 AGCAAATTTCCAAAAAGTTTCTGAATT 58.040 25.926 0.00 0.00 30.72 2.17
357 358 8.663911 TGTTAGCAAATTTCCAAAAAGTTTCTG 58.336 29.630 0.00 0.00 30.62 3.02
358 359 8.785329 TGTTAGCAAATTTCCAAAAAGTTTCT 57.215 26.923 0.00 0.00 32.29 2.52
437 438 9.206870 GCCAATTGAGAAACATAAGATCAAAAA 57.793 29.630 7.12 0.00 33.91 1.94
438 439 8.366401 TGCCAATTGAGAAACATAAGATCAAAA 58.634 29.630 7.12 0.00 33.91 2.44
439 440 7.894708 TGCCAATTGAGAAACATAAGATCAAA 58.105 30.769 7.12 0.00 33.91 2.69
440 441 7.465353 TGCCAATTGAGAAACATAAGATCAA 57.535 32.000 7.12 0.00 34.64 2.57
441 442 7.465353 TTGCCAATTGAGAAACATAAGATCA 57.535 32.000 7.12 0.00 0.00 2.92
442 443 8.937634 ATTTGCCAATTGAGAAACATAAGATC 57.062 30.769 7.12 0.00 0.00 2.75
472 473 9.781834 GGATTCAAAATATGTTCGTGAATACAA 57.218 29.630 14.18 0.00 38.75 2.41
473 474 8.951243 TGGATTCAAAATATGTTCGTGAATACA 58.049 29.630 16.32 16.32 43.80 2.29
474 475 9.221775 GTGGATTCAAAATATGTTCGTGAATAC 57.778 33.333 12.99 12.99 38.65 1.89
475 476 9.173021 AGTGGATTCAAAATATGTTCGTGAATA 57.827 29.630 11.59 0.01 38.65 1.75
476 477 7.970061 CAGTGGATTCAAAATATGTTCGTGAAT 59.030 33.333 11.49 11.49 40.65 2.57
477 478 7.174080 TCAGTGGATTCAAAATATGTTCGTGAA 59.826 33.333 4.46 4.46 33.08 3.18
478 479 6.652900 TCAGTGGATTCAAAATATGTTCGTGA 59.347 34.615 0.00 0.00 0.00 4.35
479 480 6.742718 GTCAGTGGATTCAAAATATGTTCGTG 59.257 38.462 0.00 0.00 0.00 4.35
480 481 6.429692 TGTCAGTGGATTCAAAATATGTTCGT 59.570 34.615 0.00 0.00 0.00 3.85
481 482 6.841119 TGTCAGTGGATTCAAAATATGTTCG 58.159 36.000 0.00 0.00 0.00 3.95
482 483 9.643693 AAATGTCAGTGGATTCAAAATATGTTC 57.356 29.630 0.00 0.00 0.00 3.18
492 493 9.642327 CAATTTCATAAAATGTCAGTGGATTCA 57.358 29.630 0.00 0.00 35.27 2.57
493 494 9.859427 TCAATTTCATAAAATGTCAGTGGATTC 57.141 29.630 0.00 0.00 35.27 2.52
547 548 9.587772 TTAAAGAATGTTCCACGAATTCAAAAA 57.412 25.926 6.22 0.00 33.61 1.94
548 549 9.757227 ATTAAAGAATGTTCCACGAATTCAAAA 57.243 25.926 6.22 0.00 33.61 2.44
549 550 9.757227 AATTAAAGAATGTTCCACGAATTCAAA 57.243 25.926 6.22 0.00 33.61 2.69
550 551 9.757227 AAATTAAAGAATGTTCCACGAATTCAA 57.243 25.926 6.22 0.00 33.61 2.69
551 552 9.405587 GAAATTAAAGAATGTTCCACGAATTCA 57.594 29.630 6.22 0.00 33.61 2.57
552 553 9.405587 TGAAATTAAAGAATGTTCCACGAATTC 57.594 29.630 0.00 0.00 0.00 2.17
553 554 9.927668 ATGAAATTAAAGAATGTTCCACGAATT 57.072 25.926 0.00 0.00 0.00 2.17
554 555 9.927668 AATGAAATTAAAGAATGTTCCACGAAT 57.072 25.926 0.00 0.00 32.46 3.34
680 681 9.168451 TCATTTTTATCAGTATTTTCAGCCGTA 57.832 29.630 0.00 0.00 0.00 4.02
717 719 7.048512 AGACAAATATTTAGAAACGGAGGGAG 58.951 38.462 0.00 0.00 0.00 4.30
718 720 6.954232 AGACAAATATTTAGAAACGGAGGGA 58.046 36.000 0.00 0.00 0.00 4.20
719 721 7.625828 AAGACAAATATTTAGAAACGGAGGG 57.374 36.000 0.00 0.00 0.00 4.30
720 722 8.947115 AGAAAGACAAATATTTAGAAACGGAGG 58.053 33.333 0.00 0.00 0.00 4.30
742 744 9.155975 GCAGTCACTTATTGAAATCTCTAGAAA 57.844 33.333 0.00 0.00 35.39 2.52
743 745 8.314021 TGCAGTCACTTATTGAAATCTCTAGAA 58.686 33.333 0.00 0.00 35.39 2.10
744 746 7.840931 TGCAGTCACTTATTGAAATCTCTAGA 58.159 34.615 0.00 0.00 35.39 2.43
745 747 8.659925 ATGCAGTCACTTATTGAAATCTCTAG 57.340 34.615 0.00 0.00 35.39 2.43
746 748 9.534565 GTATGCAGTCACTTATTGAAATCTCTA 57.465 33.333 0.00 0.00 35.39 2.43
747 749 7.223582 CGTATGCAGTCACTTATTGAAATCTCT 59.776 37.037 0.00 0.00 35.39 3.10
748 750 7.222805 TCGTATGCAGTCACTTATTGAAATCTC 59.777 37.037 0.00 0.00 35.39 2.75
749 751 7.041721 TCGTATGCAGTCACTTATTGAAATCT 58.958 34.615 0.00 0.00 35.39 2.40
750 752 7.234187 TCGTATGCAGTCACTTATTGAAATC 57.766 36.000 0.00 0.00 35.39 2.17
751 753 7.609760 TTCGTATGCAGTCACTTATTGAAAT 57.390 32.000 0.00 0.00 35.39 2.17
752 754 6.402118 GCTTCGTATGCAGTCACTTATTGAAA 60.402 38.462 0.00 0.00 35.39 2.69
753 755 5.063438 GCTTCGTATGCAGTCACTTATTGAA 59.937 40.000 0.00 0.00 35.39 2.69
754 756 4.566759 GCTTCGTATGCAGTCACTTATTGA 59.433 41.667 0.00 0.00 0.00 2.57
755 757 4.329801 TGCTTCGTATGCAGTCACTTATTG 59.670 41.667 0.00 0.00 35.31 1.90
756 758 4.503910 TGCTTCGTATGCAGTCACTTATT 58.496 39.130 0.00 0.00 35.31 1.40
757 759 4.123497 TGCTTCGTATGCAGTCACTTAT 57.877 40.909 0.00 0.00 35.31 1.73
758 760 3.586100 TGCTTCGTATGCAGTCACTTA 57.414 42.857 0.00 0.00 35.31 2.24
759 761 2.455674 TGCTTCGTATGCAGTCACTT 57.544 45.000 0.00 0.00 35.31 3.16
760 762 2.455674 TTGCTTCGTATGCAGTCACT 57.544 45.000 0.00 0.00 41.71 3.41
761 763 3.536158 TTTTGCTTCGTATGCAGTCAC 57.464 42.857 0.00 0.00 41.71 3.67
762 764 3.750652 TCATTTTGCTTCGTATGCAGTCA 59.249 39.130 0.00 0.00 41.71 3.41
763 765 4.142816 ACTCATTTTGCTTCGTATGCAGTC 60.143 41.667 0.00 0.00 41.71 3.51
764 766 3.753272 ACTCATTTTGCTTCGTATGCAGT 59.247 39.130 0.00 0.00 41.71 4.40
765 767 4.093514 CACTCATTTTGCTTCGTATGCAG 58.906 43.478 0.00 0.00 41.71 4.41
766 768 3.750652 TCACTCATTTTGCTTCGTATGCA 59.249 39.130 0.00 0.00 38.80 3.96
767 769 4.340894 TCACTCATTTTGCTTCGTATGC 57.659 40.909 0.00 0.00 0.00 3.14
768 770 6.779117 AGATTCACTCATTTTGCTTCGTATG 58.221 36.000 0.00 0.00 0.00 2.39
769 771 6.992063 AGATTCACTCATTTTGCTTCGTAT 57.008 33.333 0.00 0.00 0.00 3.06
770 772 6.871492 TGTAGATTCACTCATTTTGCTTCGTA 59.129 34.615 0.00 0.00 0.00 3.43
771 773 5.700832 TGTAGATTCACTCATTTTGCTTCGT 59.299 36.000 0.00 0.00 0.00 3.85
772 774 6.017933 GTGTAGATTCACTCATTTTGCTTCG 58.982 40.000 0.00 0.00 35.68 3.79
773 775 7.138692 AGTGTAGATTCACTCATTTTGCTTC 57.861 36.000 0.00 0.00 44.07 3.86
774 776 7.516198 AAGTGTAGATTCACTCATTTTGCTT 57.484 32.000 0.00 0.00 46.25 3.91
775 777 7.516198 AAAGTGTAGATTCACTCATTTTGCT 57.484 32.000 0.00 0.00 46.25 3.91
776 778 9.677567 TTTAAAGTGTAGATTCACTCATTTTGC 57.322 29.630 0.00 0.00 46.25 3.68
806 808 9.135189 ACTACCACATACGAACCTATATAAACA 57.865 33.333 0.00 0.00 0.00 2.83
807 809 9.617975 GACTACCACATACGAACCTATATAAAC 57.382 37.037 0.00 0.00 0.00 2.01
808 810 9.578576 AGACTACCACATACGAACCTATATAAA 57.421 33.333 0.00 0.00 0.00 1.40
811 813 9.750783 AATAGACTACCACATACGAACCTATAT 57.249 33.333 0.00 0.00 0.00 0.86
812 814 9.578576 AAATAGACTACCACATACGAACCTATA 57.421 33.333 0.00 0.00 0.00 1.31
813 815 8.358148 CAAATAGACTACCACATACGAACCTAT 58.642 37.037 0.00 0.00 0.00 2.57
814 816 7.557358 TCAAATAGACTACCACATACGAACCTA 59.443 37.037 0.00 0.00 0.00 3.08
815 817 6.379133 TCAAATAGACTACCACATACGAACCT 59.621 38.462 0.00 0.00 0.00 3.50
816 818 6.567050 TCAAATAGACTACCACATACGAACC 58.433 40.000 0.00 0.00 0.00 3.62
817 819 8.470040 TTTCAAATAGACTACCACATACGAAC 57.530 34.615 0.00 0.00 0.00 3.95
818 820 9.661563 AATTTCAAATAGACTACCACATACGAA 57.338 29.630 0.00 0.00 0.00 3.85
819 821 9.661563 AAATTTCAAATAGACTACCACATACGA 57.338 29.630 0.00 0.00 0.00 3.43
850 852 9.807921 TCCTTCAGTTCCTAAATATTTGTCTTT 57.192 29.630 11.05 0.00 0.00 2.52
851 853 9.454859 CTCCTTCAGTTCCTAAATATTTGTCTT 57.545 33.333 11.05 0.00 0.00 3.01
852 854 8.606830 ACTCCTTCAGTTCCTAAATATTTGTCT 58.393 33.333 11.05 0.00 26.56 3.41
853 855 8.794335 ACTCCTTCAGTTCCTAAATATTTGTC 57.206 34.615 11.05 0.00 26.56 3.18
859 861 8.521176 GCGATATACTCCTTCAGTTCCTAAATA 58.479 37.037 0.00 0.00 36.43 1.40
860 862 7.015292 TGCGATATACTCCTTCAGTTCCTAAAT 59.985 37.037 0.00 0.00 36.43 1.40
861 863 6.322969 TGCGATATACTCCTTCAGTTCCTAAA 59.677 38.462 0.00 0.00 36.43 1.85
862 864 5.831525 TGCGATATACTCCTTCAGTTCCTAA 59.168 40.000 0.00 0.00 36.43 2.69
863 865 5.382616 TGCGATATACTCCTTCAGTTCCTA 58.617 41.667 0.00 0.00 36.43 2.94
864 866 4.215908 TGCGATATACTCCTTCAGTTCCT 58.784 43.478 0.00 0.00 36.43 3.36
865 867 4.585955 TGCGATATACTCCTTCAGTTCC 57.414 45.455 0.00 0.00 36.43 3.62
866 868 5.986135 ACAATGCGATATACTCCTTCAGTTC 59.014 40.000 0.00 0.00 36.43 3.01
867 869 5.918608 ACAATGCGATATACTCCTTCAGTT 58.081 37.500 0.00 0.00 36.43 3.16
868 870 5.537300 ACAATGCGATATACTCCTTCAGT 57.463 39.130 0.00 0.00 39.41 3.41
869 871 6.682746 AGTACAATGCGATATACTCCTTCAG 58.317 40.000 0.00 0.00 0.00 3.02
870 872 6.650427 AGTACAATGCGATATACTCCTTCA 57.350 37.500 0.00 0.00 0.00 3.02
875 877 4.413087 CCGGAGTACAATGCGATATACTC 58.587 47.826 0.00 8.68 41.81 2.59
876 878 3.192844 CCCGGAGTACAATGCGATATACT 59.807 47.826 0.73 0.00 35.89 2.12
877 879 3.192001 TCCCGGAGTACAATGCGATATAC 59.808 47.826 0.73 0.00 35.89 1.47
878 880 3.423749 TCCCGGAGTACAATGCGATATA 58.576 45.455 0.73 0.00 35.89 0.86
879 881 2.244695 TCCCGGAGTACAATGCGATAT 58.755 47.619 0.73 0.00 35.89 1.63
884 886 4.442706 CCATATATCCCGGAGTACAATGC 58.557 47.826 0.73 0.00 0.00 3.56
952 955 1.527370 GCCCCCTACTCATGTGTCC 59.473 63.158 3.19 0.00 0.00 4.02
1299 1355 2.817258 TGAAAGACCAAATTACCAGCGG 59.183 45.455 0.00 0.00 0.00 5.52
1319 1379 8.464404 ACAATCAGAGAATTCATACACCAATTG 58.536 33.333 8.44 0.00 0.00 2.32
1383 1451 1.000843 TCACATGAACACTCCACTCCG 59.999 52.381 0.00 0.00 0.00 4.63
1413 1482 4.213270 TCAATTCGAGTTCCATCAACACAC 59.787 41.667 0.00 0.00 37.48 3.82
1499 1572 9.313118 ACAAAAGAGATAAAACATGACAAAACC 57.687 29.630 0.00 0.00 0.00 3.27
1542 1617 9.905713 TGCTCAATAAATCTAGAATGTAACCTT 57.094 29.630 0.00 0.00 0.00 3.50
1667 1824 2.238521 GGAGTGGATTGAAGCAAACCA 58.761 47.619 5.21 5.21 42.51 3.67
1743 1902 4.268884 GCAGTTCATCTTATCCAAGTCGTC 59.731 45.833 0.00 0.00 33.20 4.20
1750 1910 3.519107 TCCAGTGCAGTTCATCTTATCCA 59.481 43.478 0.00 0.00 0.00 3.41
1802 1962 7.333423 CGAAGTTCATAAACTAGTCATTTCCCA 59.667 37.037 3.32 0.00 45.07 4.37
1814 1974 4.175390 GGCTGAGCCGAAGTTCATAAACT 61.175 47.826 8.16 0.00 42.75 2.66
1853 2013 5.482526 ACACTCTCTACTCTCTAGTGACTCA 59.517 44.000 7.70 0.00 39.93 3.41
1961 2128 2.572333 TTTGGGGCAGGCCAGATAGC 62.572 60.000 16.36 0.00 37.98 2.97
2035 2210 9.436957 TCTGATGGTTTATCTGAAGTTAGTTTC 57.563 33.333 0.00 0.00 39.78 2.78
2093 2268 2.164219 CCCTTATGTTCTGCGCATTTGT 59.836 45.455 12.24 0.00 0.00 2.83
2126 2301 6.191657 AGAATTGAAGCTTTCCCCAAAAAT 57.808 33.333 0.00 0.00 0.00 1.82
2127 2302 5.454613 GGAGAATTGAAGCTTTCCCCAAAAA 60.455 40.000 0.00 0.00 0.00 1.94
2152 2327 8.571461 TTTCCGAACTGATTAAGAGACTACTA 57.429 34.615 0.00 0.00 0.00 1.82
2184 2366 8.732746 AGTACATCGACTAATTGCCTATTTTT 57.267 30.769 0.00 0.00 0.00 1.94
2227 2409 9.702726 CAAGTAAATTGTCATACAGATAAACCG 57.297 33.333 0.00 0.00 33.95 4.44
2292 2477 1.283347 TCTCCAAAGCTGAGAGCCAT 58.717 50.000 0.00 0.00 43.77 4.40
2391 2583 6.040247 CAGTAGTGGAGCGAAATGTATAACA 58.960 40.000 0.00 0.00 0.00 2.41
2396 2588 4.491676 GTTCAGTAGTGGAGCGAAATGTA 58.508 43.478 0.00 0.00 0.00 2.29
2416 2643 3.623960 TCAAAACGAACATCCTTCACGTT 59.376 39.130 0.00 0.00 46.35 3.99
2591 2826 3.150767 TGGGTGTAAAAGAATTCCGGTG 58.849 45.455 0.00 0.00 0.00 4.94
2664 2900 1.386533 CAGAGCCCGAGATTTGCAAT 58.613 50.000 0.00 0.00 0.00 3.56
2764 3000 5.818678 ATGGATGGCAAAAATGATAGCAT 57.181 34.783 0.00 0.00 35.92 3.79
2797 3033 9.823647 ATTAGTAGTAACATCTCACATTCCTTG 57.176 33.333 0.00 0.00 0.00 3.61
2900 4461 3.960102 ACAGACTGAAGGGCATTGAAAAA 59.040 39.130 10.08 0.00 0.00 1.94
2919 4481 2.095059 GGTAGCCAACTCAATTGCACAG 60.095 50.000 0.00 0.00 36.93 3.66
3266 5102 7.783090 ACTATTCATAGTGAGTCATTTGCAG 57.217 36.000 0.00 0.00 41.77 4.41
3556 5398 4.440826 TTCAAGCAAGGGGTTACAACTA 57.559 40.909 0.00 0.00 32.48 2.24
4014 6950 8.584157 ACCAGTTAAAACTCATCATTTTGCATA 58.416 29.630 0.00 0.00 37.08 3.14
4166 7104 7.390027 AGAGATATGTAGCATCCATAACAACC 58.610 38.462 0.00 0.00 0.00 3.77
4236 7175 3.724374 TGTCTCTTTCCTTGTACGGTTG 58.276 45.455 0.00 0.00 0.00 3.77
4239 7178 4.113354 GCTATGTCTCTTTCCTTGTACGG 58.887 47.826 0.00 0.00 0.00 4.02
4240 7179 4.113354 GGCTATGTCTCTTTCCTTGTACG 58.887 47.826 0.00 0.00 0.00 3.67
4241 7180 5.346181 AGGCTATGTCTCTTTCCTTGTAC 57.654 43.478 0.00 0.00 0.00 2.90
4242 7181 7.676683 ATTAGGCTATGTCTCTTTCCTTGTA 57.323 36.000 0.00 0.00 0.00 2.41
4243 7182 6.567602 ATTAGGCTATGTCTCTTTCCTTGT 57.432 37.500 0.00 0.00 0.00 3.16
4244 7183 7.659390 CCTTATTAGGCTATGTCTCTTTCCTTG 59.341 40.741 0.00 0.00 33.99 3.61
4245 7184 7.569111 TCCTTATTAGGCTATGTCTCTTTCCTT 59.431 37.037 0.00 0.00 41.69 3.36
4246 7185 7.015779 GTCCTTATTAGGCTATGTCTCTTTCCT 59.984 40.741 0.00 0.00 41.69 3.36
4256 7195 6.378848 GGTCTAGGAGTCCTTATTAGGCTATG 59.621 46.154 19.06 0.00 41.69 2.23
4288 7227 5.772672 AGTGACTGATGCTAGGGAGTATTAG 59.227 44.000 0.00 0.00 37.40 1.73
4289 7228 5.706447 AGTGACTGATGCTAGGGAGTATTA 58.294 41.667 0.00 0.00 0.00 0.98
4290 7229 4.551671 AGTGACTGATGCTAGGGAGTATT 58.448 43.478 0.00 0.00 0.00 1.89
4292 7231 3.671740 AGTGACTGATGCTAGGGAGTA 57.328 47.619 0.00 0.00 0.00 2.59
4293 7232 2.541233 AGTGACTGATGCTAGGGAGT 57.459 50.000 0.00 0.00 0.00 3.85
4295 7234 3.671740 ACTAGTGACTGATGCTAGGGA 57.328 47.619 0.00 0.00 37.20 4.20
4296 7235 7.710676 ATAATACTAGTGACTGATGCTAGGG 57.289 40.000 5.39 0.00 37.20 3.53
4297 7236 9.416794 CAAATAATACTAGTGACTGATGCTAGG 57.583 37.037 5.39 0.00 37.20 3.02
4298 7237 8.920665 GCAAATAATACTAGTGACTGATGCTAG 58.079 37.037 5.39 0.00 38.43 3.42
4435 8441 4.781934 GGCACCTCTTCATAACAACCTAT 58.218 43.478 0.00 0.00 0.00 2.57
4495 8501 3.008049 TCCTTTCTTTCCTACACCTCTGC 59.992 47.826 0.00 0.00 0.00 4.26
4511 8517 2.627699 TCCTGCAAACACCATTCCTTTC 59.372 45.455 0.00 0.00 0.00 2.62
4843 8945 3.812053 AGATTGCAACGATCATAAGCCTC 59.188 43.478 0.00 0.00 0.00 4.70
5071 9173 9.878667 TTTATTTACTCCGATCAATTACTCACA 57.121 29.630 0.00 0.00 0.00 3.58
5186 9288 1.380515 CTCTTCCTCTCCCTCGCCA 60.381 63.158 0.00 0.00 0.00 5.69
5195 9297 0.686112 CTTCCTCGCCCTCTTCCTCT 60.686 60.000 0.00 0.00 0.00 3.69
5311 9444 6.151817 AGCTTTTTATCTCACCACTTCAATCC 59.848 38.462 0.00 0.00 0.00 3.01
5446 9591 5.105187 AGCAGTGAGAAGTGTAGCATCATTA 60.105 40.000 0.00 0.00 0.00 1.90
5623 9770 8.402798 TCAGTTGTAGAAATATGCTGGAAAAA 57.597 30.769 0.00 0.00 0.00 1.94
5627 9774 7.994425 TTTTCAGTTGTAGAAATATGCTGGA 57.006 32.000 0.00 0.00 35.17 3.86
5629 9776 7.809331 TGCTTTTTCAGTTGTAGAAATATGCTG 59.191 33.333 0.00 0.00 35.17 4.41
5631 9778 7.809806 AGTGCTTTTTCAGTTGTAGAAATATGC 59.190 33.333 0.00 0.00 35.17 3.14
6333 11567 1.358402 CAGAGATGCGACCCGAGAG 59.642 63.158 0.00 0.00 0.00 3.20


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.