Multiple sequence alignment - TraesCS5B01G413500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G413500 chr5B 100.000 4937 0 0 1542 6478 588504470 588509406 0.000000e+00 9118.0
1 TraesCS5B01G413500 chr5B 100.000 1148 0 0 1 1148 588502929 588504076 0.000000e+00 2121.0
2 TraesCS5B01G413500 chr5B 98.611 72 1 0 6339 6410 609937622 609937551 1.900000e-25 128.0
3 TraesCS5B01G413500 chr5A 91.925 3418 190 35 1542 4899 598855097 598858488 0.000000e+00 4704.0
4 TraesCS5B01G413500 chr5A 91.222 1162 72 20 2 1148 598853883 598855029 0.000000e+00 1554.0
5 TraesCS5B01G413500 chr5A 86.401 853 78 20 5135 5969 598858514 598859346 0.000000e+00 898.0
6 TraesCS5B01G413500 chr5A 81.407 398 37 11 5966 6338 598859380 598859765 2.280000e-74 291.0
7 TraesCS5B01G413500 chr5A 100.000 28 0 0 859 886 564084018 564083991 1.200000e-02 52.8
8 TraesCS5B01G413500 chr5D 95.754 2143 56 13 2606 4718 480356648 480358785 0.000000e+00 3421.0
9 TraesCS5B01G413500 chr5D 93.444 1022 51 11 1542 2553 480355623 480356638 0.000000e+00 1502.0
10 TraesCS5B01G413500 chr5D 83.089 1159 92 44 2 1118 480354009 480355105 0.000000e+00 959.0
11 TraesCS5B01G413500 chr5D 87.383 745 70 12 5191 5931 480358990 480359714 0.000000e+00 833.0
12 TraesCS5B01G413500 chr5D 100.000 71 0 0 6339 6409 317284562 317284492 1.470000e-26 132.0
13 TraesCS5B01G413500 chr4A 96.250 80 2 1 6339 6418 494642173 494642095 5.270000e-26 130.0
14 TraesCS5B01G413500 chr6D 98.611 72 1 0 6339 6410 135102247 135102318 1.900000e-25 128.0
15 TraesCS5B01G413500 chr4B 98.611 72 1 0 6338 6409 69001623 69001694 1.900000e-25 128.0
16 TraesCS5B01G413500 chr3D 98.611 72 1 0 6339 6410 223473663 223473592 1.900000e-25 128.0
17 TraesCS5B01G413500 chr3D 98.611 72 1 0 6339 6410 438773839 438773910 1.900000e-25 128.0
18 TraesCS5B01G413500 chr1D 98.611 72 1 0 6339 6410 106240106 106240035 1.900000e-25 128.0
19 TraesCS5B01G413500 chr6B 98.592 71 1 0 6339 6409 290417764 290417834 6.820000e-25 126.0
20 TraesCS5B01G413500 chr6B 100.000 28 0 0 859 886 719095861 719095834 1.200000e-02 52.8
21 TraesCS5B01G413500 chr3B 100.000 28 0 0 859 886 791643280 791643253 1.200000e-02 52.8
22 TraesCS5B01G413500 chr3B 100.000 28 0 0 859 886 791643286 791643259 1.200000e-02 52.8
23 TraesCS5B01G413500 chr3B 100.000 28 0 0 859 886 791643292 791643265 1.200000e-02 52.8
24 TraesCS5B01G413500 chr3B 100.000 28 0 0 859 886 791643298 791643271 1.200000e-02 52.8
25 TraesCS5B01G413500 chr2D 94.286 35 0 1 854 886 625153049 625153083 1.200000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G413500 chr5B 588502929 588509406 6477 False 5619.50 9118 100.00000 1 6478 2 chr5B.!!$F1 6477
1 TraesCS5B01G413500 chr5A 598853883 598859765 5882 False 1861.75 4704 87.73875 2 6338 4 chr5A.!!$F1 6336
2 TraesCS5B01G413500 chr5D 480354009 480359714 5705 False 1678.75 3421 89.91750 2 5931 4 chr5D.!!$F1 5929

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
784 827 0.040958 CGGTGTGCTTCTGAAAGTGC 60.041 55.0 0.00 0.00 34.79 4.40 F
907 950 0.537371 AGAAGAGCAAACCCCAACCG 60.537 55.0 0.00 0.00 0.00 4.44 F
2151 2627 0.394899 GCAGAATGGGAAGGTGGAGG 60.395 60.0 0.00 0.00 35.86 4.30 F
3571 4110 0.603707 TTGTGTACTCAGCCTGCAGC 60.604 55.0 8.66 3.91 44.25 5.25 F
4931 5504 0.036483 TCATTAGGCGCTCTTGCACA 60.036 50.0 7.64 0.00 39.64 4.57 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2057 2530 0.105709 CCTCCTCCTCCTCTTCCTCC 60.106 65.000 0.00 0.0 0.00 4.30 R
2204 2680 1.222936 CTCCAAGCTCGCCCTGATT 59.777 57.895 0.00 0.0 0.00 2.57 R
4086 4642 1.640917 AGTCCGAAAAGAGTGGCCTA 58.359 50.000 3.32 0.0 0.00 3.93 R
5417 5999 0.107993 TGAAGCGAGCTTGATCTGGG 60.108 55.000 15.64 0.0 36.26 4.45 R
5760 6345 0.037303 AGTGTCCAGATGCCAACCTG 59.963 55.000 0.00 0.0 0.00 4.00 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
78 79 4.440250 CCAAGGTCGTACGATCTTCTTCAT 60.440 45.833 34.79 15.64 43.03 2.57
129 130 5.862924 ACAGGTATGTTTGTCGAATGAAG 57.137 39.130 0.00 0.00 35.63 3.02
137 138 2.933495 TGTCGAATGAAGTACCCTCG 57.067 50.000 0.00 0.00 0.00 4.63
152 153 0.512952 CCTCGCTTGAACTTTGACGG 59.487 55.000 0.00 0.00 0.00 4.79
167 168 4.789012 TTGACGGTCTATAGTTTTCGGT 57.211 40.909 9.88 0.89 0.00 4.69
238 239 1.347707 TGCAAGGAACCTGTCTCGATT 59.652 47.619 0.00 0.00 0.00 3.34
295 296 1.072159 GGCCATCATCCGGGAGAAG 59.928 63.158 0.00 0.00 0.00 2.85
304 305 0.820074 TCCGGGAGAAGCTCGAGATC 60.820 60.000 18.75 13.46 45.56 2.75
416 417 2.962786 CAACGTGGCGACCGTGAA 60.963 61.111 5.54 0.00 37.32 3.18
448 449 2.352503 ATCACAAGGCGCACATTTTC 57.647 45.000 10.83 0.00 0.00 2.29
476 477 7.334171 TGATGTGGTACAGACATAGTTTTGATG 59.666 37.037 9.16 0.00 41.80 3.07
544 554 0.824759 GGCTTCCACGACCATCTACT 59.175 55.000 0.00 0.00 0.00 2.57
555 567 1.686566 CCATCTACTGCGCACACACG 61.687 60.000 5.66 0.00 0.00 4.49
579 591 2.987149 CGATTGCGACAGTGTTACTCTT 59.013 45.455 0.00 0.00 40.82 2.85
588 600 5.593010 GACAGTGTTACTCTTGTCAGTTCT 58.407 41.667 0.00 0.00 0.00 3.01
595 607 4.065321 ACTCTTGTCAGTTCTGTCTTGG 57.935 45.455 0.00 0.00 0.00 3.61
621 645 3.620966 GCATCCAGCTTTAGGTTCAGAGT 60.621 47.826 0.00 0.00 41.15 3.24
633 659 3.055530 AGGTTCAGAGTAAGTGCTGGATG 60.056 47.826 0.00 0.00 33.05 3.51
635 661 1.833630 TCAGAGTAAGTGCTGGATGGG 59.166 52.381 0.00 0.00 33.05 4.00
648 674 1.002659 TGGATGGGTCGTGTAAACAGG 59.997 52.381 0.00 0.00 0.00 4.00
653 682 1.574702 GGTCGTGTAAACAGGGCTGC 61.575 60.000 7.27 0.00 36.67 5.25
709 752 7.867403 ACAATGTGTAAAAGGATGTAAAGCTTG 59.133 33.333 0.00 0.00 0.00 4.01
715 758 4.749245 AAGGATGTAAAGCTTGTGAACG 57.251 40.909 0.00 0.00 0.00 3.95
728 771 6.503524 AGCTTGTGAACGTTGTAAATGAATT 58.496 32.000 5.00 0.00 36.03 2.17
730 773 8.132362 AGCTTGTGAACGTTGTAAATGAATTTA 58.868 29.630 5.00 0.00 36.03 1.40
757 800 5.021033 AGGATGCAGTAGAAGAGTTGATG 57.979 43.478 0.00 0.00 0.00 3.07
762 805 4.524328 TGCAGTAGAAGAGTTGATGAGTCA 59.476 41.667 0.00 0.00 0.00 3.41
783 826 1.581934 TCGGTGTGCTTCTGAAAGTG 58.418 50.000 0.00 0.00 34.79 3.16
784 827 0.040958 CGGTGTGCTTCTGAAAGTGC 60.041 55.000 0.00 0.00 34.79 4.40
785 828 0.040958 GGTGTGCTTCTGAAAGTGCG 60.041 55.000 0.00 0.00 37.32 5.34
786 829 0.937304 GTGTGCTTCTGAAAGTGCGA 59.063 50.000 0.00 0.00 37.32 5.10
787 830 0.937304 TGTGCTTCTGAAAGTGCGAC 59.063 50.000 0.00 0.00 37.32 5.19
788 831 0.937304 GTGCTTCTGAAAGTGCGACA 59.063 50.000 0.00 0.00 37.32 4.35
790 833 1.330521 TGCTTCTGAAAGTGCGACAAC 59.669 47.619 0.00 0.00 37.32 3.32
791 834 1.330521 GCTTCTGAAAGTGCGACAACA 59.669 47.619 0.00 0.00 34.79 3.33
801 844 3.456280 AGTGCGACAACAATGCAAAAAT 58.544 36.364 0.00 0.00 40.83 1.82
825 868 3.365364 GCAAAAGATCGTCAGACTTTGGG 60.365 47.826 11.98 0.00 34.70 4.12
826 869 4.065088 CAAAAGATCGTCAGACTTTGGGA 58.935 43.478 0.00 0.00 34.70 4.37
827 870 3.320673 AAGATCGTCAGACTTTGGGAC 57.679 47.619 0.00 0.00 0.00 4.46
829 872 3.550656 CGTCAGACTTTGGGACGC 58.449 61.111 0.00 0.00 46.25 5.19
830 873 1.006102 CGTCAGACTTTGGGACGCT 60.006 57.895 0.00 0.00 46.25 5.07
864 907 2.108157 TGCACGGCGTCTCAGTTT 59.892 55.556 10.85 0.00 0.00 2.66
892 935 8.239998 AGTTTCAGTTTCAGTTTCAGAAAGAAG 58.760 33.333 0.00 0.00 37.57 2.85
900 943 5.066505 TCAGTTTCAGAAAGAAGAGCAAACC 59.933 40.000 0.00 0.00 37.57 3.27
907 950 0.537371 AGAAGAGCAAACCCCAACCG 60.537 55.000 0.00 0.00 0.00 4.44
958 1001 2.282462 ACCAAAGCCGGAAGCCAG 60.282 61.111 5.05 0.00 45.47 4.85
1988 2461 1.305046 GGAGGTTGAGGAGGACGGA 60.305 63.158 0.00 0.00 0.00 4.69
2057 2530 5.514559 GTCCGATTATGATGACGATGATGAG 59.485 44.000 0.00 0.00 0.00 2.90
2151 2627 0.394899 GCAGAATGGGAAGGTGGAGG 60.395 60.000 0.00 0.00 35.86 4.30
2177 2653 4.344237 CCCAATGGAGGGCAGAAC 57.656 61.111 0.00 0.00 43.10 3.01
2204 2680 2.191908 GCCATGGTCACGCCCATA 59.808 61.111 14.67 0.00 43.46 2.74
2304 2782 3.270027 TGACTGCATATGTAAAAGCGCT 58.730 40.909 2.64 2.64 0.00 5.92
2358 2836 7.510549 TGCCTAATGAAAATAGAGTATTGCC 57.489 36.000 0.00 0.00 0.00 4.52
2359 2837 7.059788 TGCCTAATGAAAATAGAGTATTGCCA 58.940 34.615 0.00 0.00 0.00 4.92
2368 2846 6.874288 AATAGAGTATTGCCAATTCTGCTC 57.126 37.500 0.92 2.88 0.00 4.26
2412 2895 5.023452 ACCTGACATACATCACTGGTAAGA 58.977 41.667 0.00 0.00 33.96 2.10
2421 2904 6.919775 ACATCACTGGTAAGAAACTAGAGT 57.080 37.500 0.00 0.00 38.95 3.24
2625 3134 4.730949 AATCAACCAAGCATCTTCATGG 57.269 40.909 0.00 0.00 38.91 3.66
2656 3165 8.928270 TCGATTAGGATCTAAGACAACTTTTC 57.072 34.615 0.00 0.00 37.53 2.29
2748 3275 6.893020 ATAAGGTAGAATTCTCCACCTGTT 57.107 37.500 24.45 15.33 40.54 3.16
2757 3284 3.199442 TCTCCACCTGTTTAGATGGGA 57.801 47.619 0.00 0.00 32.73 4.37
2796 3323 8.129211 AGTTGTTTTCTGTAGTTTATGTGCTTC 58.871 33.333 0.00 0.00 0.00 3.86
2849 3376 7.148171 GCAATCTAGTGCCCTATTAATCAATCC 60.148 40.741 0.00 0.00 38.66 3.01
2855 3382 4.082125 GCCCTATTAATCAATCCCTGTGG 58.918 47.826 0.00 0.00 0.00 4.17
3129 3659 2.507339 ATTTGTGTGGTTTGCTTCCG 57.493 45.000 0.00 0.00 0.00 4.30
3131 3661 0.736053 TTGTGTGGTTTGCTTCCGTC 59.264 50.000 0.00 0.00 0.00 4.79
3273 3803 3.008485 AGAGTTGGAAGTGGAAGATGGAC 59.992 47.826 0.00 0.00 0.00 4.02
3520 4056 4.144297 GTTCCATTAAGATATGCCAGGCA 58.856 43.478 18.99 18.99 44.86 4.75
3521 4057 4.025040 TCCATTAAGATATGCCAGGCAG 57.975 45.455 21.51 2.16 43.65 4.85
3571 4110 0.603707 TTGTGTACTCAGCCTGCAGC 60.604 55.000 8.66 3.91 44.25 5.25
4331 4891 8.026607 GCATATGCAAACTTACTAAAACTTGGA 58.973 33.333 22.84 0.00 41.59 3.53
4383 4943 2.823747 ACATACTGTGGCTCGTAAGTGA 59.176 45.455 0.00 0.00 39.48 3.41
4721 5294 0.311790 ACTGCGGTTGAGCATTTGTG 59.688 50.000 0.00 0.00 46.97 3.33
4728 5301 2.095919 GGTTGAGCATTTGTGTCGGTAC 60.096 50.000 0.00 0.00 0.00 3.34
4746 5319 9.524106 TGTCGGTACACAAGTTATTATTCTATG 57.476 33.333 0.00 0.00 0.00 2.23
4766 5339 5.557576 ATGTGCATCATGTATCAGTAGGT 57.442 39.130 0.00 0.00 35.19 3.08
4770 5343 3.499918 GCATCATGTATCAGTAGGTTGCC 59.500 47.826 0.00 0.00 0.00 4.52
4804 5377 6.401394 TCATCTTGTACATATGAGCCTATGC 58.599 40.000 10.38 0.00 33.26 3.14
4863 5436 7.063780 GCATTAGAAATACAAATTGCAGCACTT 59.936 33.333 0.00 0.00 0.00 3.16
4868 5441 2.937591 ACAAATTGCAGCACTTGATCG 58.062 42.857 19.10 3.97 0.00 3.69
4899 5472 9.787532 AGAATATGTGTACATACAAAATTGTGC 57.212 29.630 8.99 0.00 41.15 4.57
4901 5474 9.920133 AATATGTGTACATACAAAATTGTGCAA 57.080 25.926 8.99 0.00 41.15 4.08
4902 5475 9.920133 ATATGTGTACATACAAAATTGTGCAAA 57.080 25.926 8.99 0.00 41.15 3.68
4903 5476 8.654230 ATGTGTACATACAAAATTGTGCAAAA 57.346 26.923 8.99 0.00 42.31 2.44
4904 5477 8.654230 TGTGTACATACAAAATTGTGCAAAAT 57.346 26.923 8.99 0.00 42.31 1.82
4905 5478 9.750125 TGTGTACATACAAAATTGTGCAAAATA 57.250 25.926 1.59 0.00 42.31 1.40
4921 5494 9.029243 TGTGCAAAATAAATAAATCATTAGGCG 57.971 29.630 0.00 0.00 0.00 5.52
4922 5495 8.003784 GTGCAAAATAAATAAATCATTAGGCGC 58.996 33.333 0.00 0.00 0.00 6.53
4923 5496 7.925483 TGCAAAATAAATAAATCATTAGGCGCT 59.075 29.630 7.64 0.00 0.00 5.92
4924 5497 8.427774 GCAAAATAAATAAATCATTAGGCGCTC 58.572 33.333 7.64 0.00 0.00 5.03
4925 5498 9.683069 CAAAATAAATAAATCATTAGGCGCTCT 57.317 29.630 7.64 5.38 0.00 4.09
4927 5500 9.683069 AAATAAATAAATCATTAGGCGCTCTTG 57.317 29.630 7.64 0.21 0.00 3.02
4928 5501 4.756084 ATAAATCATTAGGCGCTCTTGC 57.244 40.909 7.64 0.00 0.00 4.01
4929 5502 2.042686 AATCATTAGGCGCTCTTGCA 57.957 45.000 7.64 0.00 39.64 4.08
4930 5503 1.303309 ATCATTAGGCGCTCTTGCAC 58.697 50.000 7.64 0.00 39.64 4.57
4931 5504 0.036483 TCATTAGGCGCTCTTGCACA 60.036 50.000 7.64 0.00 39.64 4.57
4932 5505 0.097674 CATTAGGCGCTCTTGCACAC 59.902 55.000 7.64 0.00 39.64 3.82
4933 5506 0.321564 ATTAGGCGCTCTTGCACACA 60.322 50.000 7.64 0.00 39.64 3.72
4934 5507 0.321564 TTAGGCGCTCTTGCACACAT 60.322 50.000 7.64 0.00 39.64 3.21
4935 5508 1.020861 TAGGCGCTCTTGCACACATG 61.021 55.000 7.64 0.00 39.64 3.21
4956 5529 5.593183 TGCAAAAATGTGTGCACAATATG 57.407 34.783 23.59 15.19 45.52 1.78
4957 5530 5.295152 TGCAAAAATGTGTGCACAATATGA 58.705 33.333 23.59 3.60 45.52 2.15
4958 5531 5.932883 TGCAAAAATGTGTGCACAATATGAT 59.067 32.000 23.59 9.21 45.52 2.45
4959 5532 6.091034 TGCAAAAATGTGTGCACAATATGATC 59.909 34.615 23.59 7.83 45.52 2.92
4960 5533 6.091034 GCAAAAATGTGTGCACAATATGATCA 59.909 34.615 23.59 13.88 45.41 2.92
4961 5534 7.201574 GCAAAAATGTGTGCACAATATGATCAT 60.202 33.333 23.59 15.64 45.41 2.45
4962 5535 7.764695 AAAATGTGTGCACAATATGATCATG 57.235 32.000 23.59 5.84 45.41 3.07
4963 5536 6.459670 AATGTGTGCACAATATGATCATGT 57.540 33.333 23.59 8.98 45.41 3.21
4964 5537 5.900865 TGTGTGCACAATATGATCATGTT 57.099 34.783 23.59 14.99 38.56 2.71
4965 5538 6.270156 TGTGTGCACAATATGATCATGTTT 57.730 33.333 23.59 8.95 38.56 2.83
4966 5539 6.689554 TGTGTGCACAATATGATCATGTTTT 58.310 32.000 23.59 8.21 38.56 2.43
4967 5540 7.153315 TGTGTGCACAATATGATCATGTTTTT 58.847 30.769 23.59 4.52 38.56 1.94
4968 5541 7.116519 TGTGTGCACAATATGATCATGTTTTTG 59.883 33.333 23.59 16.22 38.56 2.44
4969 5542 6.091034 TGTGCACAATATGATCATGTTTTTGC 59.909 34.615 26.32 26.32 33.06 3.68
4970 5543 6.091034 GTGCACAATATGATCATGTTTTTGCA 59.909 34.615 29.16 29.16 36.69 4.08
4971 5544 6.091034 TGCACAATATGATCATGTTTTTGCAC 59.909 34.615 29.16 18.20 35.41 4.57
4972 5545 6.091034 GCACAATATGATCATGTTTTTGCACA 59.909 34.615 27.23 6.75 32.88 4.57
4973 5546 7.360185 GCACAATATGATCATGTTTTTGCACAA 60.360 33.333 27.23 6.34 32.88 3.33
4974 5547 8.496751 CACAATATGATCATGTTTTTGCACAAA 58.503 29.630 18.72 0.00 0.00 2.83
4975 5548 8.497554 ACAATATGATCATGTTTTTGCACAAAC 58.502 29.630 19.25 19.25 37.20 2.93
4976 5549 8.714179 CAATATGATCATGTTTTTGCACAAACT 58.286 29.630 24.53 8.50 37.51 2.66
4977 5550 8.836268 ATATGATCATGTTTTTGCACAAACTT 57.164 26.923 24.53 17.57 37.51 2.66
4978 5551 6.981762 TGATCATGTTTTTGCACAAACTTT 57.018 29.167 24.53 12.54 37.51 2.66
4979 5552 7.375106 TGATCATGTTTTTGCACAAACTTTT 57.625 28.000 24.53 11.41 37.51 2.27
4980 5553 7.242079 TGATCATGTTTTTGCACAAACTTTTG 58.758 30.769 24.53 19.07 43.62 2.44
4981 5554 5.388944 TCATGTTTTTGCACAAACTTTTGC 58.611 33.333 24.53 2.85 41.79 3.68
4982 5555 4.818534 TGTTTTTGCACAAACTTTTGCA 57.181 31.818 24.53 5.24 46.93 4.08
4986 5559 0.928922 TGCACAAACTTTTGCATGCG 59.071 45.000 14.09 0.35 43.79 4.73
4987 5560 0.929615 GCACAAACTTTTGCATGCGT 59.070 45.000 14.09 1.09 41.79 5.24
4988 5561 2.123342 GCACAAACTTTTGCATGCGTA 58.877 42.857 14.09 0.00 41.79 4.42
4989 5562 2.097444 GCACAAACTTTTGCATGCGTAC 60.097 45.455 14.09 0.00 41.79 3.67
4990 5563 3.111838 CACAAACTTTTGCATGCGTACA 58.888 40.909 14.09 0.00 41.79 2.90
4991 5564 3.735240 CACAAACTTTTGCATGCGTACAT 59.265 39.130 14.09 0.00 41.79 2.29
4992 5565 4.914504 CACAAACTTTTGCATGCGTACATA 59.085 37.500 14.09 0.00 41.79 2.29
4993 5566 5.572511 CACAAACTTTTGCATGCGTACATAT 59.427 36.000 14.09 0.00 41.79 1.78
4994 5567 5.799936 ACAAACTTTTGCATGCGTACATATC 59.200 36.000 14.09 0.00 41.79 1.63
4995 5568 4.552166 ACTTTTGCATGCGTACATATCC 57.448 40.909 14.09 0.00 33.67 2.59
4996 5569 4.199310 ACTTTTGCATGCGTACATATCCT 58.801 39.130 14.09 0.00 33.67 3.24
4997 5570 5.364778 ACTTTTGCATGCGTACATATCCTA 58.635 37.500 14.09 0.00 33.67 2.94
4998 5571 5.997746 ACTTTTGCATGCGTACATATCCTAT 59.002 36.000 14.09 0.00 33.67 2.57
4999 5572 7.158697 ACTTTTGCATGCGTACATATCCTATA 58.841 34.615 14.09 0.00 33.67 1.31
5000 5573 7.659799 ACTTTTGCATGCGTACATATCCTATAA 59.340 33.333 14.09 0.00 33.67 0.98
5001 5574 6.961359 TTGCATGCGTACATATCCTATAAC 57.039 37.500 14.09 0.00 33.67 1.89
5002 5575 6.031751 TGCATGCGTACATATCCTATAACA 57.968 37.500 14.09 0.00 33.67 2.41
5003 5576 6.639563 TGCATGCGTACATATCCTATAACAT 58.360 36.000 14.09 0.00 33.67 2.71
5004 5577 6.534793 TGCATGCGTACATATCCTATAACATG 59.465 38.462 14.09 0.00 33.67 3.21
5005 5578 6.535150 GCATGCGTACATATCCTATAACATGT 59.465 38.462 0.00 0.00 33.67 3.21
5006 5579 7.064609 GCATGCGTACATATCCTATAACATGTT 59.935 37.037 16.68 16.68 33.67 2.71
5007 5580 8.595533 CATGCGTACATATCCTATAACATGTTC 58.404 37.037 15.85 0.00 33.67 3.18
5008 5581 7.892609 TGCGTACATATCCTATAACATGTTCT 58.107 34.615 15.85 8.14 33.78 3.01
5009 5582 9.016438 TGCGTACATATCCTATAACATGTTCTA 57.984 33.333 15.85 8.96 33.78 2.10
5010 5583 9.504710 GCGTACATATCCTATAACATGTTCTAG 57.495 37.037 15.85 17.94 33.78 2.43
5026 5599 9.871238 ACATGTTCTAGTACTATGTTACTTTGG 57.129 33.333 2.33 0.00 0.00 3.28
5027 5600 9.314321 CATGTTCTAGTACTATGTTACTTTGGG 57.686 37.037 2.33 0.00 0.00 4.12
5028 5601 8.654485 TGTTCTAGTACTATGTTACTTTGGGA 57.346 34.615 2.33 0.00 0.00 4.37
5029 5602 9.092338 TGTTCTAGTACTATGTTACTTTGGGAA 57.908 33.333 2.33 0.00 0.00 3.97
5030 5603 9.933723 GTTCTAGTACTATGTTACTTTGGGAAA 57.066 33.333 2.33 0.00 0.00 3.13
5041 5614 9.869757 ATGTTACTTTGGGAAATTTAATAGTGC 57.130 29.630 0.00 0.00 0.00 4.40
5042 5615 8.024285 TGTTACTTTGGGAAATTTAATAGTGCG 58.976 33.333 0.00 0.00 0.00 5.34
5043 5616 5.407502 ACTTTGGGAAATTTAATAGTGCGC 58.592 37.500 0.00 0.00 0.00 6.09
5044 5617 5.047660 ACTTTGGGAAATTTAATAGTGCGCA 60.048 36.000 5.66 5.66 0.00 6.09
5045 5618 5.392767 TTGGGAAATTTAATAGTGCGCAA 57.607 34.783 14.00 0.00 0.00 4.85
5046 5619 4.992688 TGGGAAATTTAATAGTGCGCAAG 58.007 39.130 14.00 0.00 43.44 4.01
5047 5620 4.461081 TGGGAAATTTAATAGTGCGCAAGT 59.539 37.500 14.00 4.92 41.68 3.16
5048 5621 5.648526 TGGGAAATTTAATAGTGCGCAAGTA 59.351 36.000 14.00 7.55 41.68 2.24
5058 5631 2.232756 TGCGCAAGTACTCAAACTGA 57.767 45.000 8.16 0.00 41.68 3.41
5059 5632 1.864711 TGCGCAAGTACTCAAACTGAC 59.135 47.619 8.16 0.00 41.68 3.51
5060 5633 1.864711 GCGCAAGTACTCAAACTGACA 59.135 47.619 0.30 0.00 41.68 3.58
5061 5634 2.286833 GCGCAAGTACTCAAACTGACAA 59.713 45.455 0.30 0.00 41.68 3.18
5062 5635 3.058914 GCGCAAGTACTCAAACTGACAAT 60.059 43.478 0.30 0.00 41.68 2.71
5063 5636 4.151689 GCGCAAGTACTCAAACTGACAATA 59.848 41.667 0.30 0.00 41.68 1.90
5064 5637 5.609088 CGCAAGTACTCAAACTGACAATAC 58.391 41.667 0.00 0.00 0.00 1.89
5065 5638 5.176774 CGCAAGTACTCAAACTGACAATACA 59.823 40.000 0.00 0.00 0.00 2.29
5066 5639 6.128553 CGCAAGTACTCAAACTGACAATACAT 60.129 38.462 0.00 0.00 0.00 2.29
5067 5640 7.017645 GCAAGTACTCAAACTGACAATACATG 58.982 38.462 0.00 0.00 0.00 3.21
5068 5641 6.727824 AGTACTCAAACTGACAATACATGC 57.272 37.500 0.00 0.00 0.00 4.06
5069 5642 6.230472 AGTACTCAAACTGACAATACATGCA 58.770 36.000 0.00 0.00 0.00 3.96
5070 5643 5.362556 ACTCAAACTGACAATACATGCAC 57.637 39.130 0.00 0.00 0.00 4.57
5071 5644 4.216257 ACTCAAACTGACAATACATGCACC 59.784 41.667 0.00 0.00 0.00 5.01
5072 5645 4.140536 TCAAACTGACAATACATGCACCA 58.859 39.130 0.00 0.00 0.00 4.17
5075 5648 6.602803 TCAAACTGACAATACATGCACCATAT 59.397 34.615 0.00 0.00 0.00 1.78
5082 5655 7.772757 TGACAATACATGCACCATATGAAGTTA 59.227 33.333 3.65 0.00 0.00 2.24
5083 5656 7.930217 ACAATACATGCACCATATGAAGTTAC 58.070 34.615 3.65 0.00 0.00 2.50
5094 5667 7.169308 CACCATATGAAGTTACGAACCTATGTC 59.831 40.741 3.65 0.00 0.00 3.06
5096 5669 5.670792 ATGAAGTTACGAACCTATGTCCA 57.329 39.130 0.00 0.00 0.00 4.02
5102 5675 9.106070 GAAGTTACGAACCTATGTCCATAAAAT 57.894 33.333 0.00 0.00 0.00 1.82
5106 5679 6.055588 ACGAACCTATGTCCATAAAATCCAG 58.944 40.000 0.00 0.00 0.00 3.86
5108 5681 4.729868 ACCTATGTCCATAAAATCCAGGC 58.270 43.478 0.00 0.00 0.00 4.85
5109 5682 4.167892 ACCTATGTCCATAAAATCCAGGCA 59.832 41.667 0.00 0.00 0.00 4.75
5110 5683 5.162947 ACCTATGTCCATAAAATCCAGGCAT 60.163 40.000 0.00 0.00 0.00 4.40
5111 5684 5.184479 CCTATGTCCATAAAATCCAGGCATG 59.816 44.000 0.00 0.00 0.00 4.06
5125 5698 3.777478 CAGGCATGGAGCTATGTTTTTG 58.223 45.455 0.00 0.00 44.79 2.44
5126 5699 3.444742 CAGGCATGGAGCTATGTTTTTGA 59.555 43.478 0.00 0.00 44.79 2.69
5127 5700 4.082081 CAGGCATGGAGCTATGTTTTTGAA 60.082 41.667 0.00 0.00 44.79 2.69
5128 5701 4.159135 AGGCATGGAGCTATGTTTTTGAAG 59.841 41.667 0.00 0.00 44.79 3.02
5129 5702 3.861689 GCATGGAGCTATGTTTTTGAAGC 59.138 43.478 0.00 0.00 41.15 3.86
5130 5703 4.427312 CATGGAGCTATGTTTTTGAAGCC 58.573 43.478 0.00 0.00 35.54 4.35
5132 5705 4.088634 TGGAGCTATGTTTTTGAAGCCAT 58.911 39.130 0.00 0.00 35.54 4.40
5133 5706 4.082081 TGGAGCTATGTTTTTGAAGCCATG 60.082 41.667 0.00 0.00 35.54 3.66
5140 5719 3.063180 TGTTTTTGAAGCCATGTTTTGCG 59.937 39.130 0.00 0.00 0.00 4.85
5201 5782 2.577563 TCAGAAATCAGATGGCAGGGAA 59.422 45.455 0.00 0.00 0.00 3.97
5213 5794 3.237746 TGGCAGGGAAAAATTGTGATGA 58.762 40.909 0.00 0.00 0.00 2.92
5214 5795 3.839490 TGGCAGGGAAAAATTGTGATGAT 59.161 39.130 0.00 0.00 0.00 2.45
5216 5797 3.619929 GCAGGGAAAAATTGTGATGATGC 59.380 43.478 0.00 0.00 0.00 3.91
5227 5808 1.228063 GATGATGCGGCACTCCCAT 60.228 57.895 4.03 6.76 0.00 4.00
5247 5829 6.331572 TCCCATACATTATTGTCTGTACCCAT 59.668 38.462 0.00 0.00 37.28 4.00
5248 5830 7.004086 CCCATACATTATTGTCTGTACCCATT 58.996 38.462 0.00 0.00 37.28 3.16
5250 5832 9.567776 CCATACATTATTGTCTGTACCCATTTA 57.432 33.333 0.00 0.00 37.28 1.40
5267 5849 6.262720 ACCCATTTACTGACGTAGATAGAGAC 59.737 42.308 0.00 0.00 0.00 3.36
5270 5852 7.226918 CCATTTACTGACGTAGATAGAGACTGA 59.773 40.741 0.00 0.00 0.00 3.41
5286 5868 7.099266 AGAGACTGAGATGTGACTGATAAAG 57.901 40.000 0.00 0.00 0.00 1.85
5288 5870 7.560991 AGAGACTGAGATGTGACTGATAAAGAT 59.439 37.037 0.00 0.00 0.00 2.40
5291 5873 7.490840 ACTGAGATGTGACTGATAAAGATGAG 58.509 38.462 0.00 0.00 0.00 2.90
5408 5990 2.202878 TATGGCGCAGACGAAGGC 60.203 61.111 10.83 0.00 41.59 4.35
5417 5999 2.861006 GACGAAGGCGGCTTTGAC 59.139 61.111 37.51 29.60 43.91 3.18
5478 6060 1.198637 CTGCAGCACTCAAAGGCTAAC 59.801 52.381 0.00 0.00 38.56 2.34
5479 6061 0.523519 GCAGCACTCAAAGGCTAACC 59.476 55.000 0.00 0.00 38.56 2.85
5545 6130 3.380004 CCTCCAGAGACTGACATGTCTAC 59.620 52.174 25.55 16.07 46.11 2.59
5546 6131 3.357203 TCCAGAGACTGACATGTCTACC 58.643 50.000 25.55 14.05 46.11 3.18
5547 6132 2.098280 CCAGAGACTGACATGTCTACCG 59.902 54.545 25.55 13.76 46.11 4.02
5562 6147 4.181010 CCGCCACATCCCAGGAGG 62.181 72.222 0.00 0.00 38.52 4.30
5626 6211 5.580297 CGGTGCCATTATTTTGTTTTGCTAT 59.420 36.000 0.00 0.00 0.00 2.97
5631 6216 7.277539 TGCCATTATTTTGTTTTGCTATAGTGC 59.722 33.333 0.84 0.00 0.00 4.40
5650 6235 1.740025 GCTTCCAACATGTACCTCTGC 59.260 52.381 0.00 0.00 0.00 4.26
5666 6251 1.347707 TCTGCTCTTTTGACCCGACAT 59.652 47.619 0.00 0.00 0.00 3.06
5756 6341 0.390340 GGTTGCTGAGACGCTGATGA 60.390 55.000 0.00 0.00 0.00 2.92
5760 6345 1.133216 TGCTGAGACGCTGATGACTAC 59.867 52.381 0.00 0.00 0.00 2.73
5768 6353 1.373570 GCTGATGACTACAGGTTGGC 58.626 55.000 0.00 0.00 36.09 4.52
5772 6357 2.840038 TGATGACTACAGGTTGGCATCT 59.160 45.455 23.50 0.00 46.36 2.90
5856 6445 0.030235 TCGATCATGCGAGTTACCCG 59.970 55.000 0.00 0.00 35.01 5.28
5858 6447 1.488527 GATCATGCGAGTTACCCGTC 58.511 55.000 0.00 0.00 0.00 4.79
5859 6448 0.248907 ATCATGCGAGTTACCCGTCG 60.249 55.000 0.00 0.00 39.25 5.12
5862 6451 1.310933 ATGCGAGTTACCCGTCGAGT 61.311 55.000 0.00 0.00 38.50 4.18
5868 6457 0.169894 GTTACCCGTCGAGTCCACTC 59.830 60.000 0.00 0.00 39.55 3.51
5869 6458 0.037303 TTACCCGTCGAGTCCACTCT 59.963 55.000 5.21 0.00 40.75 3.24
5870 6459 0.904649 TACCCGTCGAGTCCACTCTA 59.095 55.000 5.21 0.00 40.75 2.43
5871 6460 0.255318 ACCCGTCGAGTCCACTCTAT 59.745 55.000 5.21 0.00 40.75 1.98
5872 6461 0.945813 CCCGTCGAGTCCACTCTATC 59.054 60.000 5.21 0.00 40.75 2.08
5873 6462 0.582482 CCGTCGAGTCCACTCTATCG 59.418 60.000 5.21 6.62 40.75 2.92
5874 6463 1.568606 CGTCGAGTCCACTCTATCGA 58.431 55.000 5.21 0.00 41.51 3.59
5950 6550 3.725754 TCTGGAAGACACTTTGGCC 57.274 52.632 0.00 0.00 38.67 5.36
5953 6553 1.610522 CTGGAAGACACTTTGGCCTTG 59.389 52.381 3.32 0.00 34.07 3.61
5969 6569 2.159517 GCCTTGTTCATAACGGAAGCTG 60.160 50.000 0.00 0.00 0.00 4.24
5970 6570 3.334691 CCTTGTTCATAACGGAAGCTGA 58.665 45.455 0.00 0.00 0.00 4.26
5971 6571 3.125316 CCTTGTTCATAACGGAAGCTGAC 59.875 47.826 0.00 0.00 0.00 3.51
5973 6573 3.937814 TGTTCATAACGGAAGCTGACAT 58.062 40.909 0.00 0.00 0.00 3.06
5977 6577 6.128391 TGTTCATAACGGAAGCTGACATTTAC 60.128 38.462 0.00 0.00 0.00 2.01
5978 6578 5.730550 TCATAACGGAAGCTGACATTTACT 58.269 37.500 0.00 0.00 0.00 2.24
6026 6662 9.330063 CTCTAAAGCTTCATATATGTGAAACCA 57.670 33.333 14.83 0.84 37.63 3.67
6055 6691 5.906113 TTAACACTTGAGAGGCAAAACAA 57.094 34.783 0.00 0.00 35.74 2.83
6062 6698 1.970640 GAGAGGCAAAACAAACCCCAT 59.029 47.619 0.00 0.00 0.00 4.00
6065 6701 3.323691 AGAGGCAAAACAAACCCCATAAC 59.676 43.478 0.00 0.00 0.00 1.89
6066 6702 2.370519 AGGCAAAACAAACCCCATAACC 59.629 45.455 0.00 0.00 0.00 2.85
6067 6703 2.551287 GGCAAAACAAACCCCATAACCC 60.551 50.000 0.00 0.00 0.00 4.11
6068 6704 2.370519 GCAAAACAAACCCCATAACCCT 59.629 45.455 0.00 0.00 0.00 4.34
6069 6705 3.556213 GCAAAACAAACCCCATAACCCTC 60.556 47.826 0.00 0.00 0.00 4.30
6070 6706 2.209690 AACAAACCCCATAACCCTCG 57.790 50.000 0.00 0.00 0.00 4.63
6071 6707 1.364269 ACAAACCCCATAACCCTCGA 58.636 50.000 0.00 0.00 0.00 4.04
6072 6708 1.706305 ACAAACCCCATAACCCTCGAA 59.294 47.619 0.00 0.00 0.00 3.71
6073 6709 2.310647 ACAAACCCCATAACCCTCGAAT 59.689 45.455 0.00 0.00 0.00 3.34
6114 6750 1.613437 CACTTGTTACAGGCCCAAAGG 59.387 52.381 0.00 0.00 0.00 3.11
6116 6752 2.091555 ACTTGTTACAGGCCCAAAGGAA 60.092 45.455 0.00 0.00 33.47 3.36
6136 6772 2.843701 ACTTCCAGCAGAGTGAACAAG 58.156 47.619 0.00 0.00 0.00 3.16
6142 6778 3.058450 CAGCAGAGTGAACAAGAGACAG 58.942 50.000 0.00 0.00 0.00 3.51
6143 6779 2.961741 AGCAGAGTGAACAAGAGACAGA 59.038 45.455 0.00 0.00 0.00 3.41
6156 6792 7.067496 ACAAGAGACAGAAAGAGGTTGAATA 57.933 36.000 0.00 0.00 0.00 1.75
6167 6803 5.242795 AGAGGTTGAATATAAATCCCCCG 57.757 43.478 0.00 0.00 0.00 5.73
6177 6813 0.845102 AAATCCCCCGTCCTCCTTGT 60.845 55.000 0.00 0.00 0.00 3.16
6185 6821 0.037232 CGTCCTCCTTGTGAAGTCCC 60.037 60.000 0.00 0.00 0.00 4.46
6186 6822 1.056660 GTCCTCCTTGTGAAGTCCCA 58.943 55.000 0.00 0.00 0.00 4.37
6191 6827 1.239968 CCTTGTGAAGTCCCAGCAGC 61.240 60.000 0.00 0.00 0.00 5.25
6194 6830 1.072159 GTGAAGTCCCAGCAGCAGT 59.928 57.895 0.00 0.00 0.00 4.40
6228 6882 5.235616 TCAGTACTGATCAACGGTTTTGAAC 59.764 40.000 21.74 0.00 39.10 3.18
6230 6884 3.199677 ACTGATCAACGGTTTTGAACGA 58.800 40.909 0.00 0.00 33.91 3.85
6239 6893 2.711885 GGTTTTGAACGAAACACCTCG 58.288 47.619 16.28 0.00 44.50 4.63
6253 6907 2.226437 ACACCTCGTTTGCTATTTGCTG 59.774 45.455 0.00 0.00 43.37 4.41
6257 6911 3.129287 CCTCGTTTGCTATTTGCTGGAAT 59.871 43.478 0.00 0.00 43.37 3.01
6272 6926 4.344359 CTGGAATAGCTTTAGGTCCTCC 57.656 50.000 0.00 0.00 0.00 4.30
6278 6932 1.203313 AGCTTTAGGTCCTCCAGGTCA 60.203 52.381 0.00 0.00 36.34 4.02
6289 6943 2.202797 CAGGTCATCGCCTCACGG 60.203 66.667 0.00 0.00 43.89 4.94
6302 6956 2.287368 GCCTCACGGTTTACCTGTTTTG 60.287 50.000 0.00 0.00 0.00 2.44
6321 6982 5.921004 TTTGTCTGCAAAATAAACCATGC 57.079 34.783 0.00 0.00 41.15 4.06
6324 6985 3.987220 GTCTGCAAAATAAACCATGCGTT 59.013 39.130 0.00 0.00 41.61 4.84
6340 7001 3.609103 GCGTTAAGCCAATGTCCATAG 57.391 47.619 0.00 0.00 40.81 2.23
6341 7002 2.287009 GCGTTAAGCCAATGTCCATAGC 60.287 50.000 0.00 0.00 40.81 2.97
6342 7003 2.290641 CGTTAAGCCAATGTCCATAGCC 59.709 50.000 0.13 0.00 0.00 3.93
6343 7004 3.555966 GTTAAGCCAATGTCCATAGCCT 58.444 45.455 0.13 0.00 0.00 4.58
6344 7005 4.714632 GTTAAGCCAATGTCCATAGCCTA 58.285 43.478 0.13 0.00 0.00 3.93
6345 7006 2.938956 AGCCAATGTCCATAGCCTAC 57.061 50.000 0.13 0.00 0.00 3.18
6346 7007 1.421646 AGCCAATGTCCATAGCCTACC 59.578 52.381 0.13 0.00 0.00 3.18
6347 7008 1.545651 GCCAATGTCCATAGCCTACCC 60.546 57.143 0.00 0.00 0.00 3.69
6348 7009 1.073923 CCAATGTCCATAGCCTACCCC 59.926 57.143 0.00 0.00 0.00 4.95
6349 7010 1.774254 CAATGTCCATAGCCTACCCCA 59.226 52.381 0.00 0.00 0.00 4.96
6350 7011 2.174639 CAATGTCCATAGCCTACCCCAA 59.825 50.000 0.00 0.00 0.00 4.12
6351 7012 1.209621 TGTCCATAGCCTACCCCAAC 58.790 55.000 0.00 0.00 0.00 3.77
6352 7013 1.274184 TGTCCATAGCCTACCCCAACT 60.274 52.381 0.00 0.00 0.00 3.16
6353 7014 1.844497 GTCCATAGCCTACCCCAACTT 59.156 52.381 0.00 0.00 0.00 2.66
6354 7015 1.843851 TCCATAGCCTACCCCAACTTG 59.156 52.381 0.00 0.00 0.00 3.16
6355 7016 1.564348 CCATAGCCTACCCCAACTTGT 59.436 52.381 0.00 0.00 0.00 3.16
6356 7017 2.025321 CCATAGCCTACCCCAACTTGTT 60.025 50.000 0.00 0.00 0.00 2.83
6357 7018 3.563479 CCATAGCCTACCCCAACTTGTTT 60.563 47.826 0.00 0.00 0.00 2.83
6358 7019 1.995376 AGCCTACCCCAACTTGTTTG 58.005 50.000 0.00 0.00 34.63 2.93
6370 7031 5.592104 CAACTTGTTTGGGACTAAAGGTT 57.408 39.130 0.00 0.00 0.00 3.50
6371 7032 5.972935 CAACTTGTTTGGGACTAAAGGTTT 58.027 37.500 0.00 0.00 0.00 3.27
6372 7033 6.403049 CAACTTGTTTGGGACTAAAGGTTTT 58.597 36.000 0.00 0.00 0.00 2.43
6373 7034 5.972935 ACTTGTTTGGGACTAAAGGTTTTG 58.027 37.500 0.00 0.00 0.00 2.44
6374 7035 5.482526 ACTTGTTTGGGACTAAAGGTTTTGT 59.517 36.000 0.00 0.00 0.00 2.83
6375 7036 6.014070 ACTTGTTTGGGACTAAAGGTTTTGTT 60.014 34.615 0.00 0.00 0.00 2.83
6376 7037 5.725362 TGTTTGGGACTAAAGGTTTTGTTG 58.275 37.500 0.00 0.00 0.00 3.33
6377 7038 5.246429 TGTTTGGGACTAAAGGTTTTGTTGT 59.754 36.000 0.00 0.00 0.00 3.32
6378 7039 6.167685 GTTTGGGACTAAAGGTTTTGTTGTT 58.832 36.000 0.00 0.00 0.00 2.83
6379 7040 5.331876 TGGGACTAAAGGTTTTGTTGTTG 57.668 39.130 0.00 0.00 0.00 3.33
6380 7041 4.773149 TGGGACTAAAGGTTTTGTTGTTGT 59.227 37.500 0.00 0.00 0.00 3.32
6381 7042 5.246429 TGGGACTAAAGGTTTTGTTGTTGTT 59.754 36.000 0.00 0.00 0.00 2.83
6382 7043 5.579119 GGGACTAAAGGTTTTGTTGTTGTTG 59.421 40.000 0.00 0.00 0.00 3.33
6383 7044 6.160684 GGACTAAAGGTTTTGTTGTTGTTGT 58.839 36.000 0.00 0.00 0.00 3.32
6384 7045 6.647481 GGACTAAAGGTTTTGTTGTTGTTGTT 59.353 34.615 0.00 0.00 0.00 2.83
6385 7046 7.359681 GGACTAAAGGTTTTGTTGTTGTTGTTG 60.360 37.037 0.00 0.00 0.00 3.33
6386 7047 6.987404 ACTAAAGGTTTTGTTGTTGTTGTTGT 59.013 30.769 0.00 0.00 0.00 3.32
6387 7048 6.685527 AAAGGTTTTGTTGTTGTTGTTGTT 57.314 29.167 0.00 0.00 0.00 2.83
6388 7049 5.665381 AGGTTTTGTTGTTGTTGTTGTTG 57.335 34.783 0.00 0.00 0.00 3.33
6389 7050 5.119694 AGGTTTTGTTGTTGTTGTTGTTGT 58.880 33.333 0.00 0.00 0.00 3.32
6390 7051 5.586643 AGGTTTTGTTGTTGTTGTTGTTGTT 59.413 32.000 0.00 0.00 0.00 2.83
6391 7052 5.678919 GGTTTTGTTGTTGTTGTTGTTGTTG 59.321 36.000 0.00 0.00 0.00 3.33
6392 7053 6.251549 GTTTTGTTGTTGTTGTTGTTGTTGT 58.748 32.000 0.00 0.00 0.00 3.32
6393 7054 6.422776 TTTGTTGTTGTTGTTGTTGTTGTT 57.577 29.167 0.00 0.00 0.00 2.83
6394 7055 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
6395 7056 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
6396 7057 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
6397 7058 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
6398 7059 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
6399 7060 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
6400 7061 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
6401 7062 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
6402 7063 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
6403 7064 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
6404 7065 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
6405 7066 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
6406 7067 5.395325 TGTTGTTGTTGTTGTTGTTGTTG 57.605 34.783 0.00 0.00 0.00 3.33
6407 7068 4.870426 TGTTGTTGTTGTTGTTGTTGTTGT 59.130 33.333 0.00 0.00 0.00 3.32
6408 7069 5.351465 TGTTGTTGTTGTTGTTGTTGTTGTT 59.649 32.000 0.00 0.00 0.00 2.83
6409 7070 6.533723 TGTTGTTGTTGTTGTTGTTGTTGTTA 59.466 30.769 0.00 0.00 0.00 2.41
6410 7071 7.064134 TGTTGTTGTTGTTGTTGTTGTTGTTAA 59.936 29.630 0.00 0.00 0.00 2.01
6411 7072 7.166628 TGTTGTTGTTGTTGTTGTTGTTAAG 57.833 32.000 0.00 0.00 0.00 1.85
6412 7073 5.830900 TGTTGTTGTTGTTGTTGTTAAGC 57.169 34.783 0.00 0.00 0.00 3.09
6413 7074 4.686554 TGTTGTTGTTGTTGTTGTTAAGCC 59.313 37.500 0.00 0.00 0.00 4.35
6414 7075 4.521130 TGTTGTTGTTGTTGTTAAGCCA 57.479 36.364 0.00 0.00 0.00 4.75
6415 7076 4.883083 TGTTGTTGTTGTTGTTAAGCCAA 58.117 34.783 0.00 0.00 0.00 4.52
6416 7077 5.482908 TGTTGTTGTTGTTGTTAAGCCAAT 58.517 33.333 0.00 0.00 0.00 3.16
6417 7078 5.349817 TGTTGTTGTTGTTGTTAAGCCAATG 59.650 36.000 0.00 0.00 0.00 2.82
6418 7079 5.078411 TGTTGTTGTTGTTAAGCCAATGT 57.922 34.783 0.00 0.00 0.00 2.71
6419 7080 5.105752 TGTTGTTGTTGTTAAGCCAATGTC 58.894 37.500 0.00 0.00 0.00 3.06
6420 7081 4.314740 TGTTGTTGTTAAGCCAATGTCC 57.685 40.909 0.00 0.00 0.00 4.02
6421 7082 3.701542 TGTTGTTGTTAAGCCAATGTCCA 59.298 39.130 0.00 0.00 0.00 4.02
6422 7083 4.202101 TGTTGTTGTTAAGCCAATGTCCAG 60.202 41.667 0.00 0.00 0.00 3.86
6423 7084 2.295909 TGTTGTTAAGCCAATGTCCAGC 59.704 45.455 0.00 0.00 0.00 4.85
6424 7085 2.558359 GTTGTTAAGCCAATGTCCAGCT 59.442 45.455 0.00 0.00 38.88 4.24
6425 7086 3.712016 TGTTAAGCCAATGTCCAGCTA 57.288 42.857 0.00 0.00 35.30 3.32
6426 7087 3.609853 TGTTAAGCCAATGTCCAGCTAG 58.390 45.455 0.00 0.00 35.30 3.42
6427 7088 3.263170 TGTTAAGCCAATGTCCAGCTAGA 59.737 43.478 0.00 0.00 35.30 2.43
6428 7089 2.409948 AAGCCAATGTCCAGCTAGAC 57.590 50.000 5.23 5.23 35.30 2.59
6429 7090 0.176680 AGCCAATGTCCAGCTAGACG 59.823 55.000 7.80 0.00 39.77 4.18
6430 7091 0.175760 GCCAATGTCCAGCTAGACGA 59.824 55.000 7.80 0.00 39.77 4.20
6431 7092 1.405526 GCCAATGTCCAGCTAGACGAA 60.406 52.381 7.80 0.00 39.77 3.85
6432 7093 2.743183 GCCAATGTCCAGCTAGACGAAT 60.743 50.000 7.80 0.00 39.77 3.34
6433 7094 3.126831 CCAATGTCCAGCTAGACGAATC 58.873 50.000 7.80 0.00 39.77 2.52
6434 7095 2.783828 ATGTCCAGCTAGACGAATCG 57.216 50.000 7.80 0.00 39.77 3.34
6435 7096 1.746470 TGTCCAGCTAGACGAATCGA 58.254 50.000 10.55 0.00 39.77 3.59
6436 7097 1.400846 TGTCCAGCTAGACGAATCGAC 59.599 52.381 10.55 2.58 39.77 4.20
6437 7098 1.400846 GTCCAGCTAGACGAATCGACA 59.599 52.381 10.55 0.00 0.00 4.35
6438 7099 1.400846 TCCAGCTAGACGAATCGACAC 59.599 52.381 10.55 0.26 0.00 3.67
6439 7100 1.132453 CCAGCTAGACGAATCGACACA 59.868 52.381 10.55 0.00 0.00 3.72
6440 7101 2.223595 CCAGCTAGACGAATCGACACAT 60.224 50.000 10.55 0.00 0.00 3.21
6441 7102 3.439293 CAGCTAGACGAATCGACACATT 58.561 45.455 10.55 0.00 0.00 2.71
6442 7103 3.483922 CAGCTAGACGAATCGACACATTC 59.516 47.826 10.55 0.00 0.00 2.67
6443 7104 3.378742 AGCTAGACGAATCGACACATTCT 59.621 43.478 10.55 2.86 31.48 2.40
6444 7105 3.726730 GCTAGACGAATCGACACATTCTC 59.273 47.826 10.55 0.00 31.48 2.87
6445 7106 3.850122 AGACGAATCGACACATTCTCA 57.150 42.857 10.55 0.00 31.48 3.27
6446 7107 3.763902 AGACGAATCGACACATTCTCAG 58.236 45.455 10.55 0.00 31.48 3.35
6447 7108 3.440522 AGACGAATCGACACATTCTCAGA 59.559 43.478 10.55 0.00 31.48 3.27
6448 7109 4.082733 AGACGAATCGACACATTCTCAGAA 60.083 41.667 10.55 0.00 31.48 3.02
6449 7110 4.169508 ACGAATCGACACATTCTCAGAAG 58.830 43.478 10.55 0.00 31.48 2.85
6450 7111 3.000277 CGAATCGACACATTCTCAGAAGC 60.000 47.826 0.00 0.00 31.48 3.86
6451 7112 3.599730 ATCGACACATTCTCAGAAGCA 57.400 42.857 0.00 0.00 0.00 3.91
6452 7113 3.385193 TCGACACATTCTCAGAAGCAA 57.615 42.857 0.00 0.00 0.00 3.91
6453 7114 3.059884 TCGACACATTCTCAGAAGCAAC 58.940 45.455 0.00 0.00 0.00 4.17
6454 7115 2.158449 CGACACATTCTCAGAAGCAACC 59.842 50.000 0.00 0.00 0.00 3.77
6455 7116 2.146342 ACACATTCTCAGAAGCAACCG 58.854 47.619 0.00 0.00 0.00 4.44
6456 7117 1.135859 CACATTCTCAGAAGCAACCGC 60.136 52.381 0.00 0.00 38.99 5.68
6457 7118 1.159285 CATTCTCAGAAGCAACCGCA 58.841 50.000 0.00 0.00 42.27 5.69
6458 7119 1.536766 CATTCTCAGAAGCAACCGCAA 59.463 47.619 0.00 0.00 42.27 4.85
6459 7120 1.896220 TTCTCAGAAGCAACCGCAAT 58.104 45.000 0.00 0.00 42.27 3.56
6460 7121 1.442769 TCTCAGAAGCAACCGCAATC 58.557 50.000 0.00 0.00 42.27 2.67
6461 7122 1.159285 CTCAGAAGCAACCGCAATCA 58.841 50.000 0.00 0.00 42.27 2.57
6462 7123 1.536766 CTCAGAAGCAACCGCAATCAA 59.463 47.619 0.00 0.00 42.27 2.57
6463 7124 2.161855 TCAGAAGCAACCGCAATCAAT 58.838 42.857 0.00 0.00 42.27 2.57
6464 7125 2.557924 TCAGAAGCAACCGCAATCAATT 59.442 40.909 0.00 0.00 42.27 2.32
6465 7126 3.005684 TCAGAAGCAACCGCAATCAATTT 59.994 39.130 0.00 0.00 42.27 1.82
6466 7127 3.365820 CAGAAGCAACCGCAATCAATTTC 59.634 43.478 0.00 0.00 42.27 2.17
6467 7128 2.368655 AGCAACCGCAATCAATTTCC 57.631 45.000 0.00 0.00 42.27 3.13
6468 7129 1.895131 AGCAACCGCAATCAATTTCCT 59.105 42.857 0.00 0.00 42.27 3.36
6469 7130 2.299867 AGCAACCGCAATCAATTTCCTT 59.700 40.909 0.00 0.00 42.27 3.36
6470 7131 3.066380 GCAACCGCAATCAATTTCCTTT 58.934 40.909 0.00 0.00 38.36 3.11
6471 7132 3.123453 GCAACCGCAATCAATTTCCTTTC 59.877 43.478 0.00 0.00 38.36 2.62
6472 7133 3.592898 ACCGCAATCAATTTCCTTTCC 57.407 42.857 0.00 0.00 0.00 3.13
6473 7134 2.896685 ACCGCAATCAATTTCCTTTCCA 59.103 40.909 0.00 0.00 0.00 3.53
6474 7135 3.056607 ACCGCAATCAATTTCCTTTCCAG 60.057 43.478 0.00 0.00 0.00 3.86
6475 7136 2.925563 CGCAATCAATTTCCTTTCCAGC 59.074 45.455 0.00 0.00 0.00 4.85
6476 7137 3.367703 CGCAATCAATTTCCTTTCCAGCT 60.368 43.478 0.00 0.00 0.00 4.24
6477 7138 4.572909 GCAATCAATTTCCTTTCCAGCTT 58.427 39.130 0.00 0.00 0.00 3.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
78 79 1.234821 GTGAGAACAAATGGTCGGCA 58.765 50.000 0.00 0.00 36.72 5.69
120 121 1.471119 AGCGAGGGTACTTCATTCGA 58.529 50.000 0.00 0.00 33.38 3.71
121 122 1.927174 CAAGCGAGGGTACTTCATTCG 59.073 52.381 0.00 0.00 0.00 3.34
129 130 2.479275 GTCAAAGTTCAAGCGAGGGTAC 59.521 50.000 0.00 0.00 0.00 3.34
137 138 5.169295 ACTATAGACCGTCAAAGTTCAAGC 58.831 41.667 6.78 0.00 0.00 4.01
152 153 5.865552 TGTAAGCACACCGAAAACTATAGAC 59.134 40.000 6.78 0.00 0.00 2.59
167 168 4.035091 GTCACATCAAACACTGTAAGCACA 59.965 41.667 0.00 0.00 37.60 4.57
274 275 3.482232 CTCCCGGATGATGGCCCAC 62.482 68.421 0.73 0.00 0.00 4.61
304 305 4.452733 GCCTCCAACGGGTCGAGG 62.453 72.222 1.89 1.89 45.12 4.63
337 338 1.114627 TCATCACGATCTCCCAGTGG 58.885 55.000 0.63 0.63 36.60 4.00
416 417 4.235360 GCCTTGTGATATAACGCGATAGT 58.765 43.478 15.93 0.00 39.35 2.12
426 427 4.881273 AGAAAATGTGCGCCTTGTGATATA 59.119 37.500 4.18 0.00 0.00 0.86
427 428 3.696051 AGAAAATGTGCGCCTTGTGATAT 59.304 39.130 4.18 0.00 0.00 1.63
428 429 3.081061 AGAAAATGTGCGCCTTGTGATA 58.919 40.909 4.18 0.00 0.00 2.15
448 449 7.387673 TCAAAACTATGTCTGTACCACATCAAG 59.612 37.037 10.11 6.93 35.95 3.02
476 477 1.457346 CCAGATCAACAACCAGGAGC 58.543 55.000 0.00 0.00 0.00 4.70
560 572 3.728845 ACAAGAGTAACACTGTCGCAAT 58.271 40.909 0.00 0.00 0.00 3.56
621 645 0.249120 CACGACCCATCCAGCACTTA 59.751 55.000 0.00 0.00 0.00 2.24
633 659 0.953960 CAGCCCTGTTTACACGACCC 60.954 60.000 0.00 0.00 0.00 4.46
635 661 1.866925 GCAGCCCTGTTTACACGAC 59.133 57.895 0.00 0.00 0.00 4.34
653 682 0.657312 TGTTCAGAAACAGCACAGCG 59.343 50.000 0.00 0.00 40.45 5.18
728 771 7.661536 ACTCTTCTACTGCATCCTTGTATAA 57.338 36.000 0.00 0.00 0.00 0.98
730 773 6.155221 TCAACTCTTCTACTGCATCCTTGTAT 59.845 38.462 0.00 0.00 0.00 2.29
741 784 6.471841 CGAATGACTCATCAACTCTTCTACTG 59.528 42.308 0.00 0.00 38.69 2.74
757 800 1.728971 CAGAAGCACACCGAATGACTC 59.271 52.381 0.00 0.00 0.00 3.36
762 805 2.549754 CACTTTCAGAAGCACACCGAAT 59.450 45.455 0.00 0.00 36.29 3.34
801 844 4.261155 CCAAAGTCTGACGATCTTTTGCAA 60.261 41.667 11.72 0.00 30.41 4.08
814 857 2.158813 AGAAAAGCGTCCCAAAGTCTGA 60.159 45.455 0.00 0.00 0.00 3.27
815 858 2.031682 CAGAAAAGCGTCCCAAAGTCTG 60.032 50.000 0.00 0.00 0.00 3.51
825 868 3.242316 ACGTCAAACTTCAGAAAAGCGTC 60.242 43.478 0.00 0.00 0.00 5.19
826 869 2.676342 ACGTCAAACTTCAGAAAAGCGT 59.324 40.909 0.00 0.00 0.00 5.07
827 870 3.029074 CACGTCAAACTTCAGAAAAGCG 58.971 45.455 0.00 0.00 0.00 4.68
828 871 2.783832 GCACGTCAAACTTCAGAAAAGC 59.216 45.455 0.00 0.00 0.00 3.51
829 872 3.786048 GTGCACGTCAAACTTCAGAAAAG 59.214 43.478 0.00 0.00 0.00 2.27
830 873 3.726486 CGTGCACGTCAAACTTCAGAAAA 60.726 43.478 30.50 0.00 34.11 2.29
856 899 6.173339 ACTGAAACTGAAACTGAAACTGAGA 58.827 36.000 0.00 0.00 0.00 3.27
857 900 6.428385 ACTGAAACTGAAACTGAAACTGAG 57.572 37.500 0.00 0.00 0.00 3.35
858 901 6.817765 AACTGAAACTGAAACTGAAACTGA 57.182 33.333 0.00 0.00 0.00 3.41
859 902 7.083858 TGAAACTGAAACTGAAACTGAAACTG 58.916 34.615 0.00 0.00 0.00 3.16
860 903 7.174946 TCTGAAACTGAAACTGAAACTGAAACT 59.825 33.333 0.00 0.00 0.00 2.66
861 904 7.305474 TCTGAAACTGAAACTGAAACTGAAAC 58.695 34.615 0.00 0.00 0.00 2.78
864 907 7.390440 TCTTTCTGAAACTGAAACTGAAACTGA 59.610 33.333 0.00 0.00 31.79 3.41
892 935 3.680786 GGCGGTTGGGGTTTGCTC 61.681 66.667 0.00 0.00 0.00 4.26
1649 2122 2.835895 GGGAGGACGAGGAGGAGC 60.836 72.222 0.00 0.00 0.00 4.70
1919 2392 0.536687 ACCACTCCTCGAAGACGTCA 60.537 55.000 19.50 0.00 40.69 4.35
1988 2461 1.759445 CCATTGGTCTCTCCATCGACT 59.241 52.381 0.00 0.00 46.60 4.18
2009 2482 0.972471 CCCCTTCCAGCCCATCAAAC 60.972 60.000 0.00 0.00 0.00 2.93
2019 2492 2.060980 CGGACTCCTCCCCTTCCAG 61.061 68.421 0.00 0.00 31.93 3.86
2057 2530 0.105709 CCTCCTCCTCCTCTTCCTCC 60.106 65.000 0.00 0.00 0.00 4.30
2151 2627 1.593265 CTCCATTGGGCAAAGCACC 59.407 57.895 2.09 0.00 0.00 5.01
2204 2680 1.222936 CTCCAAGCTCGCCCTGATT 59.777 57.895 0.00 0.00 0.00 2.57
2235 2711 8.686334 ACAGAAAGAATGTAACAACAAGTTGAT 58.314 29.630 18.90 10.13 42.93 2.57
2286 2762 4.277257 TGAAGCGCTTTTACATATGCAG 57.723 40.909 25.84 0.00 0.00 4.41
2297 2773 3.733443 AATTTCAGGTTGAAGCGCTTT 57.267 38.095 25.84 8.06 37.70 3.51
2304 2782 6.607198 AGGACTCTTCAAAATTTCAGGTTGAA 59.393 34.615 0.00 0.00 38.57 2.69
2378 2861 7.875041 GTGATGTATGTCAGGTAAGCATAGATT 59.125 37.037 0.00 0.00 31.89 2.40
2379 2862 7.234371 AGTGATGTATGTCAGGTAAGCATAGAT 59.766 37.037 0.00 0.00 33.60 1.98
2380 2863 6.551227 AGTGATGTATGTCAGGTAAGCATAGA 59.449 38.462 0.00 0.00 0.00 1.98
2421 2904 7.888021 TCAGCCCACAGAGATCTTAAAATTTTA 59.112 33.333 6.54 6.54 0.00 1.52
2503 2990 6.072098 CACTAGCACGACATATACTAGTTCG 58.928 44.000 11.39 11.39 41.11 3.95
2625 3134 8.809478 GTTGTCTTAGATCCTAATCGAAAGTTC 58.191 37.037 0.00 0.00 36.97 3.01
2656 3165 2.756760 CCAACATCAGTTTGGGATCAGG 59.243 50.000 0.00 0.00 35.28 3.86
2685 3194 5.721960 AGATCTGAGTACATACACAACCCTT 59.278 40.000 0.00 0.00 0.00 3.95
2825 3352 7.240616 AGGGATTGATTAATAGGGCACTAGATT 59.759 37.037 0.40 0.00 31.54 2.40
3273 3803 7.517417 GCAGTATTAACAATGTCAAGAGGATCG 60.517 40.741 0.00 0.00 42.67 3.69
3520 4056 5.533903 AGATCAAAAGTTCACACTTGATGCT 59.466 36.000 4.79 1.13 42.89 3.79
3521 4057 5.628193 CAGATCAAAAGTTCACACTTGATGC 59.372 40.000 4.79 0.00 42.89 3.91
3571 4110 2.423892 TGTAGAGCCTAAGTTCTCAGCG 59.576 50.000 0.00 0.00 34.98 5.18
3702 4258 7.039784 AGCAAGAAACAGCATAATTAAAGACCA 60.040 33.333 0.00 0.00 0.00 4.02
4086 4642 1.640917 AGTCCGAAAAGAGTGGCCTA 58.359 50.000 3.32 0.00 0.00 3.93
4706 5279 0.110238 CCGACACAAATGCTCAACCG 60.110 55.000 0.00 0.00 0.00 4.44
4721 5294 9.525409 ACATAGAATAATAACTTGTGTACCGAC 57.475 33.333 0.00 0.00 0.00 4.79
4745 5318 5.118286 CAACCTACTGATACATGATGCACA 58.882 41.667 0.00 0.00 0.00 4.57
4746 5319 4.024556 GCAACCTACTGATACATGATGCAC 60.025 45.833 0.00 0.00 0.00 4.57
4755 5328 9.516314 GATTTTATTTTGGCAACCTACTGATAC 57.484 33.333 0.00 0.00 0.00 2.24
4766 5339 9.941325 ATGTACAAGATGATTTTATTTTGGCAA 57.059 25.926 0.00 0.00 0.00 4.52
4833 5406 7.010738 GCTGCAATTTGTATTTCTAATGCACAT 59.989 33.333 0.00 0.00 30.33 3.21
4837 5410 6.532657 AGTGCTGCAATTTGTATTTCTAATGC 59.467 34.615 2.77 0.00 0.00 3.56
4843 5416 6.237384 CGATCAAGTGCTGCAATTTGTATTTC 60.237 38.462 13.16 10.89 0.00 2.17
4845 5418 5.097529 CGATCAAGTGCTGCAATTTGTATT 58.902 37.500 13.16 6.64 0.00 1.89
4848 5421 2.294233 ACGATCAAGTGCTGCAATTTGT 59.706 40.909 13.16 4.54 0.00 2.83
4853 5426 1.882912 AAGACGATCAAGTGCTGCAA 58.117 45.000 2.77 0.00 0.00 4.08
4899 5472 9.683069 AGAGCGCCTAATGATTTATTTATTTTG 57.317 29.630 2.29 0.00 0.00 2.44
4901 5474 9.683069 CAAGAGCGCCTAATGATTTATTTATTT 57.317 29.630 2.29 0.00 0.00 1.40
4902 5475 7.809806 GCAAGAGCGCCTAATGATTTATTTATT 59.190 33.333 2.29 0.00 0.00 1.40
4903 5476 7.040478 TGCAAGAGCGCCTAATGATTTATTTAT 60.040 33.333 2.29 0.00 46.23 1.40
4904 5477 6.262049 TGCAAGAGCGCCTAATGATTTATTTA 59.738 34.615 2.29 0.00 46.23 1.40
4905 5478 5.067674 TGCAAGAGCGCCTAATGATTTATTT 59.932 36.000 2.29 0.00 46.23 1.40
4906 5479 4.580167 TGCAAGAGCGCCTAATGATTTATT 59.420 37.500 2.29 0.00 46.23 1.40
4907 5480 4.023707 GTGCAAGAGCGCCTAATGATTTAT 60.024 41.667 2.29 0.00 45.39 1.40
4908 5481 3.312421 GTGCAAGAGCGCCTAATGATTTA 59.688 43.478 2.29 0.00 45.39 1.40
4909 5482 2.098117 GTGCAAGAGCGCCTAATGATTT 59.902 45.455 2.29 0.00 45.39 2.17
4910 5483 1.672881 GTGCAAGAGCGCCTAATGATT 59.327 47.619 2.29 0.00 45.39 2.57
4911 5484 1.303309 GTGCAAGAGCGCCTAATGAT 58.697 50.000 2.29 0.00 45.39 2.45
4912 5485 2.767536 GTGCAAGAGCGCCTAATGA 58.232 52.632 2.29 0.00 45.39 2.57
4934 5507 5.295152 TCATATTGTGCACACATTTTTGCA 58.705 33.333 21.56 0.98 46.43 4.08
4935 5508 5.842619 TCATATTGTGCACACATTTTTGC 57.157 34.783 21.56 0.00 41.52 3.68
4936 5509 7.583860 TGATCATATTGTGCACACATTTTTG 57.416 32.000 21.56 11.48 41.52 2.44
4937 5510 7.820386 ACATGATCATATTGTGCACACATTTTT 59.180 29.630 21.56 3.42 41.52 1.94
4938 5511 7.324935 ACATGATCATATTGTGCACACATTTT 58.675 30.769 21.56 2.83 41.52 1.82
4939 5512 6.869695 ACATGATCATATTGTGCACACATTT 58.130 32.000 21.56 8.06 41.52 2.32
4940 5513 6.459670 ACATGATCATATTGTGCACACATT 57.540 33.333 21.56 10.19 41.52 2.71
4941 5514 6.459670 AACATGATCATATTGTGCACACAT 57.540 33.333 21.56 17.73 41.52 3.21
4942 5515 5.900865 AACATGATCATATTGTGCACACA 57.099 34.783 21.56 12.91 39.98 3.72
4943 5516 7.449827 CAAAAACATGATCATATTGTGCACAC 58.550 34.615 21.56 6.73 0.00 3.82
4944 5517 6.091034 GCAAAAACATGATCATATTGTGCACA 59.909 34.615 27.67 17.42 33.61 4.57
4945 5518 6.091034 TGCAAAAACATGATCATATTGTGCAC 59.909 34.615 29.64 10.75 36.22 4.57
4946 5519 6.091034 GTGCAAAAACATGATCATATTGTGCA 59.909 34.615 29.64 29.64 37.53 4.57
4947 5520 6.091034 TGTGCAAAAACATGATCATATTGTGC 59.909 34.615 26.75 26.75 33.82 4.57
4948 5521 7.583860 TGTGCAAAAACATGATCATATTGTG 57.416 32.000 8.15 12.50 0.00 3.33
4949 5522 8.497554 GTTTGTGCAAAAACATGATCATATTGT 58.502 29.630 24.62 0.64 39.39 2.71
4950 5523 8.714179 AGTTTGTGCAAAAACATGATCATATTG 58.286 29.630 29.51 11.96 41.56 1.90
4951 5524 8.836268 AGTTTGTGCAAAAACATGATCATATT 57.164 26.923 29.51 0.00 41.56 1.28
4952 5525 8.836268 AAGTTTGTGCAAAAACATGATCATAT 57.164 26.923 29.51 7.19 41.56 1.78
4953 5526 8.659925 AAAGTTTGTGCAAAAACATGATCATA 57.340 26.923 29.51 0.00 41.56 2.15
4954 5527 7.556733 AAAGTTTGTGCAAAAACATGATCAT 57.443 28.000 29.51 1.18 41.56 2.45
4955 5528 6.981762 AAAGTTTGTGCAAAAACATGATCA 57.018 29.167 29.51 0.00 41.56 2.92
4956 5529 6.195060 GCAAAAGTTTGTGCAAAAACATGATC 59.805 34.615 29.51 14.37 41.56 2.92
4957 5530 6.028987 GCAAAAGTTTGTGCAAAAACATGAT 58.971 32.000 29.51 13.10 41.56 2.45
4958 5531 5.388944 GCAAAAGTTTGTGCAAAAACATGA 58.611 33.333 29.51 0.00 41.56 3.07
4959 5532 5.667978 GCAAAAGTTTGTGCAAAAACATG 57.332 34.783 29.51 24.24 41.56 3.21
4968 5541 0.929615 ACGCATGCAAAAGTTTGTGC 59.070 45.000 19.57 12.84 40.24 4.57
4969 5542 3.111838 TGTACGCATGCAAAAGTTTGTG 58.888 40.909 19.57 0.00 40.24 3.33
4970 5543 3.428746 TGTACGCATGCAAAAGTTTGT 57.571 38.095 19.57 7.16 40.24 2.83
4971 5544 5.229887 GGATATGTACGCATGCAAAAGTTTG 59.770 40.000 19.57 0.50 37.58 2.93
4972 5545 5.125417 AGGATATGTACGCATGCAAAAGTTT 59.875 36.000 19.57 0.00 36.58 2.66
4973 5546 4.640201 AGGATATGTACGCATGCAAAAGTT 59.360 37.500 19.57 0.00 36.58 2.66
4974 5547 4.199310 AGGATATGTACGCATGCAAAAGT 58.801 39.130 19.57 9.85 36.58 2.66
4975 5548 4.818534 AGGATATGTACGCATGCAAAAG 57.181 40.909 19.57 3.36 36.58 2.27
4976 5549 7.442666 TGTTATAGGATATGTACGCATGCAAAA 59.557 33.333 19.57 0.00 36.58 2.44
4977 5550 6.931840 TGTTATAGGATATGTACGCATGCAAA 59.068 34.615 19.57 0.96 36.58 3.68
4978 5551 6.459923 TGTTATAGGATATGTACGCATGCAA 58.540 36.000 19.57 1.39 36.58 4.08
4979 5552 6.031751 TGTTATAGGATATGTACGCATGCA 57.968 37.500 19.57 0.00 36.58 3.96
4980 5553 6.535150 ACATGTTATAGGATATGTACGCATGC 59.465 38.462 7.91 7.91 36.58 4.06
4981 5554 8.479313 AACATGTTATAGGATATGTACGCATG 57.521 34.615 9.97 0.00 36.58 4.06
4982 5555 8.531982 AGAACATGTTATAGGATATGTACGCAT 58.468 33.333 11.95 0.00 39.03 4.73
4983 5556 7.892609 AGAACATGTTATAGGATATGTACGCA 58.107 34.615 11.95 0.00 33.70 5.24
4984 5557 9.504710 CTAGAACATGTTATAGGATATGTACGC 57.495 37.037 25.85 3.97 33.70 4.42
5000 5573 9.871238 CCAAAGTAACATAGTACTAGAACATGT 57.129 33.333 8.85 5.62 33.05 3.21
5001 5574 9.314321 CCCAAAGTAACATAGTACTAGAACATG 57.686 37.037 8.85 4.97 33.05 3.21
5002 5575 9.263446 TCCCAAAGTAACATAGTACTAGAACAT 57.737 33.333 8.85 0.00 33.05 2.71
5003 5576 8.654485 TCCCAAAGTAACATAGTACTAGAACA 57.346 34.615 8.85 0.00 33.05 3.18
5004 5577 9.933723 TTTCCCAAAGTAACATAGTACTAGAAC 57.066 33.333 8.85 4.07 33.05 3.01
5015 5588 9.869757 GCACTATTAAATTTCCCAAAGTAACAT 57.130 29.630 0.00 0.00 0.00 2.71
5016 5589 8.024285 CGCACTATTAAATTTCCCAAAGTAACA 58.976 33.333 0.00 0.00 0.00 2.41
5017 5590 7.008901 GCGCACTATTAAATTTCCCAAAGTAAC 59.991 37.037 0.30 0.00 0.00 2.50
5018 5591 7.030768 GCGCACTATTAAATTTCCCAAAGTAA 58.969 34.615 0.30 0.00 0.00 2.24
5019 5592 6.151312 TGCGCACTATTAAATTTCCCAAAGTA 59.849 34.615 5.66 0.00 0.00 2.24
5020 5593 5.047660 TGCGCACTATTAAATTTCCCAAAGT 60.048 36.000 5.66 0.00 0.00 2.66
5021 5594 5.406649 TGCGCACTATTAAATTTCCCAAAG 58.593 37.500 5.66 0.00 0.00 2.77
5022 5595 5.392767 TGCGCACTATTAAATTTCCCAAA 57.607 34.783 5.66 0.00 0.00 3.28
5023 5596 5.047660 ACTTGCGCACTATTAAATTTCCCAA 60.048 36.000 11.12 0.00 0.00 4.12
5024 5597 4.461081 ACTTGCGCACTATTAAATTTCCCA 59.539 37.500 11.12 0.00 0.00 4.37
5025 5598 4.993905 ACTTGCGCACTATTAAATTTCCC 58.006 39.130 11.12 0.00 0.00 3.97
5026 5599 6.782150 AGTACTTGCGCACTATTAAATTTCC 58.218 36.000 11.12 0.00 0.00 3.13
5027 5600 7.461107 TGAGTACTTGCGCACTATTAAATTTC 58.539 34.615 11.12 0.00 0.00 2.17
5028 5601 7.372451 TGAGTACTTGCGCACTATTAAATTT 57.628 32.000 11.12 0.00 0.00 1.82
5029 5602 6.978343 TGAGTACTTGCGCACTATTAAATT 57.022 33.333 11.12 0.00 0.00 1.82
5030 5603 6.978343 TTGAGTACTTGCGCACTATTAAAT 57.022 33.333 11.12 0.00 0.00 1.40
5031 5604 6.425721 AGTTTGAGTACTTGCGCACTATTAAA 59.574 34.615 11.12 3.40 0.00 1.52
5032 5605 5.929992 AGTTTGAGTACTTGCGCACTATTAA 59.070 36.000 11.12 0.00 0.00 1.40
5033 5606 5.347635 CAGTTTGAGTACTTGCGCACTATTA 59.652 40.000 11.12 0.00 0.00 0.98
5034 5607 4.152402 CAGTTTGAGTACTTGCGCACTATT 59.848 41.667 11.12 0.00 0.00 1.73
5035 5608 3.679980 CAGTTTGAGTACTTGCGCACTAT 59.320 43.478 11.12 0.00 0.00 2.12
5036 5609 3.057019 CAGTTTGAGTACTTGCGCACTA 58.943 45.455 11.12 0.00 0.00 2.74
5037 5610 1.867233 CAGTTTGAGTACTTGCGCACT 59.133 47.619 11.12 2.93 0.00 4.40
5038 5611 1.864711 TCAGTTTGAGTACTTGCGCAC 59.135 47.619 11.12 0.00 0.00 5.34
5039 5612 1.864711 GTCAGTTTGAGTACTTGCGCA 59.135 47.619 5.66 5.66 0.00 6.09
5040 5613 1.864711 TGTCAGTTTGAGTACTTGCGC 59.135 47.619 0.00 0.00 0.00 6.09
5041 5614 4.732285 ATTGTCAGTTTGAGTACTTGCG 57.268 40.909 0.00 0.00 0.00 4.85
5042 5615 6.539649 TGTATTGTCAGTTTGAGTACTTGC 57.460 37.500 0.00 0.00 0.00 4.01
5043 5616 7.017645 GCATGTATTGTCAGTTTGAGTACTTG 58.982 38.462 0.00 0.00 0.00 3.16
5044 5617 6.710295 TGCATGTATTGTCAGTTTGAGTACTT 59.290 34.615 0.00 0.00 0.00 2.24
5045 5618 6.147821 GTGCATGTATTGTCAGTTTGAGTACT 59.852 38.462 0.00 0.00 0.00 2.73
5046 5619 6.307155 GTGCATGTATTGTCAGTTTGAGTAC 58.693 40.000 0.00 0.00 0.00 2.73
5047 5620 5.411361 GGTGCATGTATTGTCAGTTTGAGTA 59.589 40.000 0.00 0.00 0.00 2.59
5048 5621 4.216257 GGTGCATGTATTGTCAGTTTGAGT 59.784 41.667 0.00 0.00 0.00 3.41
5049 5622 4.216042 TGGTGCATGTATTGTCAGTTTGAG 59.784 41.667 0.00 0.00 0.00 3.02
5050 5623 4.140536 TGGTGCATGTATTGTCAGTTTGA 58.859 39.130 0.00 0.00 0.00 2.69
5051 5624 4.502171 TGGTGCATGTATTGTCAGTTTG 57.498 40.909 0.00 0.00 0.00 2.93
5052 5625 6.602803 TCATATGGTGCATGTATTGTCAGTTT 59.397 34.615 2.13 0.00 0.00 2.66
5053 5626 6.121590 TCATATGGTGCATGTATTGTCAGTT 58.878 36.000 2.13 0.00 0.00 3.16
5054 5627 5.683681 TCATATGGTGCATGTATTGTCAGT 58.316 37.500 2.13 0.00 0.00 3.41
5055 5628 6.261603 ACTTCATATGGTGCATGTATTGTCAG 59.738 38.462 2.13 0.00 0.00 3.51
5056 5629 6.121590 ACTTCATATGGTGCATGTATTGTCA 58.878 36.000 2.13 0.00 0.00 3.58
5057 5630 6.624352 ACTTCATATGGTGCATGTATTGTC 57.376 37.500 2.13 0.00 0.00 3.18
5058 5631 7.254761 CGTAACTTCATATGGTGCATGTATTGT 60.255 37.037 2.13 0.00 0.00 2.71
5059 5632 7.042119 TCGTAACTTCATATGGTGCATGTATTG 60.042 37.037 2.13 0.00 0.00 1.90
5060 5633 6.989759 TCGTAACTTCATATGGTGCATGTATT 59.010 34.615 2.13 0.00 0.00 1.89
5061 5634 6.521162 TCGTAACTTCATATGGTGCATGTAT 58.479 36.000 2.13 0.00 0.00 2.29
5062 5635 5.908341 TCGTAACTTCATATGGTGCATGTA 58.092 37.500 2.13 0.00 0.00 2.29
5063 5636 4.765273 TCGTAACTTCATATGGTGCATGT 58.235 39.130 2.13 0.00 0.00 3.21
5064 5637 5.501715 GTTCGTAACTTCATATGGTGCATG 58.498 41.667 2.13 0.00 0.00 4.06
5065 5638 4.574828 GGTTCGTAACTTCATATGGTGCAT 59.425 41.667 2.13 0.00 0.00 3.96
5066 5639 3.936453 GGTTCGTAACTTCATATGGTGCA 59.064 43.478 2.13 0.00 0.00 4.57
5067 5640 4.189231 AGGTTCGTAACTTCATATGGTGC 58.811 43.478 2.13 0.00 0.00 5.01
5068 5641 6.984474 ACATAGGTTCGTAACTTCATATGGTG 59.016 38.462 2.13 0.00 0.00 4.17
5069 5642 7.120923 ACATAGGTTCGTAACTTCATATGGT 57.879 36.000 2.13 0.00 0.00 3.55
5070 5643 6.645415 GGACATAGGTTCGTAACTTCATATGG 59.355 42.308 2.13 0.00 0.00 2.74
5071 5644 7.207383 TGGACATAGGTTCGTAACTTCATATG 58.793 38.462 0.00 0.00 0.00 1.78
5072 5645 7.356089 TGGACATAGGTTCGTAACTTCATAT 57.644 36.000 0.00 0.00 0.00 1.78
5075 5648 5.670792 ATGGACATAGGTTCGTAACTTCA 57.329 39.130 0.00 0.00 0.00 3.02
5082 5655 5.996644 TGGATTTTATGGACATAGGTTCGT 58.003 37.500 0.00 0.00 0.00 3.85
5083 5656 5.470098 CCTGGATTTTATGGACATAGGTTCG 59.530 44.000 0.00 0.00 0.00 3.95
5106 5679 4.427312 CTTCAAAAACATAGCTCCATGCC 58.573 43.478 0.00 0.00 44.23 4.40
5108 5681 4.082081 TGGCTTCAAAAACATAGCTCCATG 60.082 41.667 0.00 0.00 34.16 3.66
5109 5682 4.088634 TGGCTTCAAAAACATAGCTCCAT 58.911 39.130 0.00 0.00 34.16 3.41
5110 5683 3.495331 TGGCTTCAAAAACATAGCTCCA 58.505 40.909 0.00 0.00 34.16 3.86
5111 5684 4.082026 ACATGGCTTCAAAAACATAGCTCC 60.082 41.667 0.00 0.00 34.16 4.70
5112 5685 5.064441 ACATGGCTTCAAAAACATAGCTC 57.936 39.130 0.00 0.00 34.16 4.09
5113 5686 5.473066 AACATGGCTTCAAAAACATAGCT 57.527 34.783 0.00 0.00 34.16 3.32
5114 5687 6.365050 CAAAACATGGCTTCAAAAACATAGC 58.635 36.000 0.00 0.00 0.00 2.97
5115 5688 6.365050 GCAAAACATGGCTTCAAAAACATAG 58.635 36.000 0.00 0.00 0.00 2.23
5116 5689 5.050499 CGCAAAACATGGCTTCAAAAACATA 60.050 36.000 0.00 0.00 0.00 2.29
5118 5691 3.063180 CGCAAAACATGGCTTCAAAAACA 59.937 39.130 0.00 0.00 0.00 2.83
5119 5692 3.063316 ACGCAAAACATGGCTTCAAAAAC 59.937 39.130 0.00 0.00 0.00 2.43
5120 5693 3.265791 ACGCAAAACATGGCTTCAAAAA 58.734 36.364 0.00 0.00 0.00 1.94
5122 5695 2.593346 ACGCAAAACATGGCTTCAAA 57.407 40.000 0.00 0.00 0.00 2.69
5124 5697 1.135915 ACAACGCAAAACATGGCTTCA 59.864 42.857 0.00 0.00 0.00 3.02
5125 5698 1.522258 CACAACGCAAAACATGGCTTC 59.478 47.619 0.00 0.00 0.00 3.86
5126 5699 1.569708 CACAACGCAAAACATGGCTT 58.430 45.000 0.00 0.00 0.00 4.35
5127 5700 0.875474 GCACAACGCAAAACATGGCT 60.875 50.000 0.00 0.00 41.79 4.75
5128 5701 1.564139 GCACAACGCAAAACATGGC 59.436 52.632 0.00 0.00 41.79 4.40
5169 5748 7.658261 CCATCTGATTTCTGATGCAAATGTAT 58.342 34.615 17.32 0.00 45.30 2.29
5171 5750 5.681437 GCCATCTGATTTCTGATGCAAATGT 60.681 40.000 17.32 0.00 45.30 2.71
5173 5752 4.404394 TGCCATCTGATTTCTGATGCAAAT 59.596 37.500 17.32 0.00 45.30 2.32
5175 5754 3.358118 TGCCATCTGATTTCTGATGCAA 58.642 40.909 17.32 8.28 45.30 4.08
5178 5757 2.885266 CCCTGCCATCTGATTTCTGATG 59.115 50.000 16.31 16.31 45.84 3.07
5179 5758 2.781757 TCCCTGCCATCTGATTTCTGAT 59.218 45.455 0.00 0.00 35.33 2.90
5180 5759 2.199208 TCCCTGCCATCTGATTTCTGA 58.801 47.619 0.00 0.00 0.00 3.27
5181 5760 2.723322 TCCCTGCCATCTGATTTCTG 57.277 50.000 0.00 0.00 0.00 3.02
5182 5761 3.744940 TTTCCCTGCCATCTGATTTCT 57.255 42.857 0.00 0.00 0.00 2.52
5183 5762 4.806640 TTTTTCCCTGCCATCTGATTTC 57.193 40.909 0.00 0.00 0.00 2.17
5201 5782 2.231964 AGTGCCGCATCATCACAATTTT 59.768 40.909 0.00 0.00 33.44 1.82
5214 5795 0.833949 TAATGTATGGGAGTGCCGCA 59.166 50.000 0.00 0.00 42.15 5.69
5216 5797 3.476552 ACAATAATGTATGGGAGTGCCG 58.523 45.455 0.00 0.00 38.24 5.69
5227 5808 9.607988 CAGTAAATGGGTACAGACAATAATGTA 57.392 33.333 0.00 0.00 40.74 2.29
5247 5829 7.554211 TCTCAGTCTCTATCTACGTCAGTAAA 58.446 38.462 0.00 0.00 31.59 2.01
5248 5830 7.110043 TCTCAGTCTCTATCTACGTCAGTAA 57.890 40.000 0.00 0.00 31.59 2.24
5250 5832 5.601583 TCTCAGTCTCTATCTACGTCAGT 57.398 43.478 0.00 0.00 0.00 3.41
5251 5833 5.989168 ACATCTCAGTCTCTATCTACGTCAG 59.011 44.000 0.00 0.00 0.00 3.51
5267 5849 7.714703 TCTCATCTTTATCAGTCACATCTCAG 58.285 38.462 0.00 0.00 0.00 3.35
5270 5852 7.658525 ACTCTCATCTTTATCAGTCACATCT 57.341 36.000 0.00 0.00 0.00 2.90
5288 5870 5.535753 TGTCAACTCAGATGAAACTCTCA 57.464 39.130 0.00 0.00 38.81 3.27
5291 5873 6.791887 TGAATGTCAACTCAGATGAAACTC 57.208 37.500 0.00 0.00 0.00 3.01
5408 5990 1.089920 CTTGATCTGGGTCAAAGCCG 58.910 55.000 0.00 0.00 38.98 5.52
5417 5999 0.107993 TGAAGCGAGCTTGATCTGGG 60.108 55.000 15.64 0.00 36.26 4.45
5478 6060 2.162681 GGTGACAAGATTGGTCAAGGG 58.837 52.381 0.00 0.00 45.96 3.95
5479 6061 2.862541 TGGTGACAAGATTGGTCAAGG 58.137 47.619 0.00 0.00 45.96 3.61
5508 6090 3.672295 GAGGAAGCAGCCGTCCCAG 62.672 68.421 8.82 0.00 40.08 4.45
5545 6130 4.181010 CCTCCTGGGATGTGGCGG 62.181 72.222 0.00 0.00 37.23 6.13
5546 6131 4.864334 GCCTCCTGGGATGTGGCG 62.864 72.222 3.22 0.00 37.23 5.69
5547 6132 2.786512 TTTGCCTCCTGGGATGTGGC 62.787 60.000 10.35 10.35 43.49 5.01
5562 6147 7.531534 CACGATTCTTGATTTCCAAAATTTTGC 59.468 33.333 22.90 11.05 36.86 3.68
5626 6211 3.838317 AGAGGTACATGTTGGAAGCACTA 59.162 43.478 2.30 0.00 0.00 2.74
5631 6216 3.055530 AGAGCAGAGGTACATGTTGGAAG 60.056 47.826 2.30 0.00 0.00 3.46
5634 6219 3.340814 AAGAGCAGAGGTACATGTTGG 57.659 47.619 2.30 0.00 0.00 3.77
5650 6235 5.941948 AAAGTAATGTCGGGTCAAAAGAG 57.058 39.130 0.00 0.00 0.00 2.85
5756 6341 1.279271 GTCCAGATGCCAACCTGTAGT 59.721 52.381 0.00 0.00 0.00 2.73
5760 6345 0.037303 AGTGTCCAGATGCCAACCTG 59.963 55.000 0.00 0.00 0.00 4.00
5768 6353 4.938226 GGTAGGAAGAAAAGTGTCCAGATG 59.062 45.833 0.00 0.00 33.57 2.90
5772 6357 4.165372 ACTTGGTAGGAAGAAAAGTGTCCA 59.835 41.667 0.00 0.00 33.57 4.02
5950 6550 3.745975 TGTCAGCTTCCGTTATGAACAAG 59.254 43.478 0.00 0.00 0.00 3.16
5953 6553 4.946784 AATGTCAGCTTCCGTTATGAAC 57.053 40.909 0.00 0.00 0.00 3.18
5998 6634 9.547753 GTTTCACATATATGAAGCTTTAGAGGA 57.452 33.333 19.63 0.00 39.68 3.71
6004 6640 9.590451 CATTTGGTTTCACATATATGAAGCTTT 57.410 29.630 19.63 0.00 39.68 3.51
6007 6643 8.931385 AACATTTGGTTTCACATATATGAAGC 57.069 30.769 19.63 12.61 39.68 3.86
6026 6662 6.463995 TGCCTCTCAAGTGTTAAAACATTT 57.536 33.333 0.00 0.00 41.59 2.32
6035 6671 4.494484 GTTTGTTTTGCCTCTCAAGTGTT 58.506 39.130 0.00 0.00 35.84 3.32
6055 6691 1.214424 CCATTCGAGGGTTATGGGGTT 59.786 52.381 5.32 0.00 36.10 4.11
6066 6702 1.154035 GTTTTGCGCCCATTCGAGG 60.154 57.895 4.18 0.00 0.00 4.63
6067 6703 0.454957 CTGTTTTGCGCCCATTCGAG 60.455 55.000 4.18 0.00 0.00 4.04
6068 6704 1.578926 CTGTTTTGCGCCCATTCGA 59.421 52.632 4.18 0.00 0.00 3.71
6069 6705 2.088178 GCTGTTTTGCGCCCATTCG 61.088 57.895 4.18 0.00 0.00 3.34
6070 6706 1.006337 TGCTGTTTTGCGCCCATTC 60.006 52.632 4.18 0.00 35.36 2.67
6071 6707 1.005867 CTGCTGTTTTGCGCCCATT 60.006 52.632 4.18 0.00 35.36 3.16
6072 6708 2.652530 CTGCTGTTTTGCGCCCAT 59.347 55.556 4.18 0.00 35.36 4.00
6073 6709 4.283403 GCTGCTGTTTTGCGCCCA 62.283 61.111 4.18 0.00 35.36 5.36
6114 6750 2.838736 TGTTCACTCTGCTGGAAGTTC 58.161 47.619 0.00 0.00 35.30 3.01
6116 6752 2.435805 TCTTGTTCACTCTGCTGGAAGT 59.564 45.455 0.00 0.00 35.30 3.01
6126 6762 4.987912 CCTCTTTCTGTCTCTTGTTCACTC 59.012 45.833 0.00 0.00 0.00 3.51
6130 6766 5.360591 TCAACCTCTTTCTGTCTCTTGTTC 58.639 41.667 0.00 0.00 0.00 3.18
6142 6778 6.206829 CGGGGGATTTATATTCAACCTCTTTC 59.793 42.308 0.00 0.00 0.00 2.62
6143 6779 6.068670 CGGGGGATTTATATTCAACCTCTTT 58.931 40.000 0.00 0.00 0.00 2.52
6156 6792 1.774856 CAAGGAGGACGGGGGATTTAT 59.225 52.381 0.00 0.00 0.00 1.40
6167 6803 1.002544 CTGGGACTTCACAAGGAGGAC 59.997 57.143 0.00 0.00 0.00 3.85
6177 6813 1.065926 CATACTGCTGCTGGGACTTCA 60.066 52.381 11.29 0.00 0.00 3.02
6185 6821 2.616842 TGATTGATGCATACTGCTGCTG 59.383 45.455 0.00 4.89 45.31 4.41
6186 6822 2.879026 CTGATTGATGCATACTGCTGCT 59.121 45.455 0.00 0.00 45.31 4.24
6208 6844 4.370049 TCGTTCAAAACCGTTGATCAGTA 58.630 39.130 0.00 0.00 0.00 2.74
6216 6852 2.488937 AGGTGTTTCGTTCAAAACCGTT 59.511 40.909 0.00 0.00 38.16 4.44
6217 6853 2.086094 AGGTGTTTCGTTCAAAACCGT 58.914 42.857 0.00 0.00 38.16 4.83
6218 6854 2.711885 GAGGTGTTTCGTTCAAAACCG 58.288 47.619 0.00 0.00 38.16 4.44
6219 6855 2.711885 CGAGGTGTTTCGTTCAAAACC 58.288 47.619 0.00 0.00 38.16 3.27
6253 6907 3.071747 CCTGGAGGACCTAAAGCTATTCC 59.928 52.174 0.00 0.00 37.39 3.01
6257 6911 2.043939 TGACCTGGAGGACCTAAAGCTA 59.956 50.000 0.00 0.00 38.94 3.32
6264 6918 2.060980 GCGATGACCTGGAGGACCT 61.061 63.158 0.00 0.00 38.94 3.85
6265 6919 2.501610 GCGATGACCTGGAGGACC 59.498 66.667 0.00 0.00 38.94 4.46
6266 6920 2.022240 GAGGCGATGACCTGGAGGAC 62.022 65.000 0.00 0.00 41.32 3.85
6267 6921 1.758514 GAGGCGATGACCTGGAGGA 60.759 63.158 0.00 0.00 41.32 3.71
6270 6924 2.710902 CGTGAGGCGATGACCTGGA 61.711 63.158 0.00 0.00 41.32 3.86
6302 6956 3.574614 ACGCATGGTTTATTTTGCAGAC 58.425 40.909 0.00 0.00 34.80 3.51
6321 6982 2.290641 GGCTATGGACATTGGCTTAACG 59.709 50.000 11.74 0.00 36.50 3.18
6324 6985 3.072476 GGTAGGCTATGGACATTGGCTTA 59.928 47.826 22.74 11.15 44.19 3.09
6338 6999 3.149005 CAAACAAGTTGGGGTAGGCTA 57.851 47.619 7.96 0.00 33.18 3.93
6339 7000 1.995376 CAAACAAGTTGGGGTAGGCT 58.005 50.000 7.96 0.00 33.18 4.58
6348 7009 5.592104 AACCTTTAGTCCCAAACAAGTTG 57.408 39.130 0.00 0.00 36.94 3.16
6349 7010 6.014070 ACAAAACCTTTAGTCCCAAACAAGTT 60.014 34.615 0.00 0.00 0.00 2.66
6350 7011 5.482526 ACAAAACCTTTAGTCCCAAACAAGT 59.517 36.000 0.00 0.00 0.00 3.16
6351 7012 5.972935 ACAAAACCTTTAGTCCCAAACAAG 58.027 37.500 0.00 0.00 0.00 3.16
6352 7013 6.166982 CAACAAAACCTTTAGTCCCAAACAA 58.833 36.000 0.00 0.00 0.00 2.83
6353 7014 5.246429 ACAACAAAACCTTTAGTCCCAAACA 59.754 36.000 0.00 0.00 0.00 2.83
6354 7015 5.726397 ACAACAAAACCTTTAGTCCCAAAC 58.274 37.500 0.00 0.00 0.00 2.93
6355 7016 6.166982 CAACAACAAAACCTTTAGTCCCAAA 58.833 36.000 0.00 0.00 0.00 3.28
6356 7017 5.246429 ACAACAACAAAACCTTTAGTCCCAA 59.754 36.000 0.00 0.00 0.00 4.12
6357 7018 4.773149 ACAACAACAAAACCTTTAGTCCCA 59.227 37.500 0.00 0.00 0.00 4.37
6358 7019 5.333299 ACAACAACAAAACCTTTAGTCCC 57.667 39.130 0.00 0.00 0.00 4.46
6359 7020 6.160684 ACAACAACAACAAAACCTTTAGTCC 58.839 36.000 0.00 0.00 0.00 3.85
6360 7021 7.170151 ACAACAACAACAACAAAACCTTTAGTC 59.830 33.333 0.00 0.00 0.00 2.59
6361 7022 6.987404 ACAACAACAACAACAAAACCTTTAGT 59.013 30.769 0.00 0.00 0.00 2.24
6362 7023 7.414814 ACAACAACAACAACAAAACCTTTAG 57.585 32.000 0.00 0.00 0.00 1.85
6363 7024 7.280205 ACAACAACAACAACAACAAAACCTTTA 59.720 29.630 0.00 0.00 0.00 1.85
6364 7025 6.094186 ACAACAACAACAACAACAAAACCTTT 59.906 30.769 0.00 0.00 0.00 3.11
6365 7026 5.586643 ACAACAACAACAACAACAAAACCTT 59.413 32.000 0.00 0.00 0.00 3.50
6366 7027 5.119694 ACAACAACAACAACAACAAAACCT 58.880 33.333 0.00 0.00 0.00 3.50
6367 7028 5.411083 ACAACAACAACAACAACAAAACC 57.589 34.783 0.00 0.00 0.00 3.27
6368 7029 6.251549 ACAACAACAACAACAACAACAAAAC 58.748 32.000 0.00 0.00 0.00 2.43
6369 7030 6.422776 ACAACAACAACAACAACAACAAAA 57.577 29.167 0.00 0.00 0.00 2.44
6370 7031 6.128282 ACAACAACAACAACAACAACAACAAA 60.128 30.769 0.00 0.00 0.00 2.83
6371 7032 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
6372 7033 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
6373 7034 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
6374 7035 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
6375 7036 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
6376 7037 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
6377 7038 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
6378 7039 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
6379 7040 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
6380 7041 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
6381 7042 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
6382 7043 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
6383 7044 5.351465 ACAACAACAACAACAACAACAACAA 59.649 32.000 0.00 0.00 0.00 2.83
6384 7045 4.870426 ACAACAACAACAACAACAACAACA 59.130 33.333 0.00 0.00 0.00 3.33
6385 7046 5.396750 ACAACAACAACAACAACAACAAC 57.603 34.783 0.00 0.00 0.00 3.32
6386 7047 7.534085 TTAACAACAACAACAACAACAACAA 57.466 28.000 0.00 0.00 0.00 2.83
6387 7048 6.292381 GCTTAACAACAACAACAACAACAACA 60.292 34.615 0.00 0.00 0.00 3.33
6388 7049 6.068300 GCTTAACAACAACAACAACAACAAC 58.932 36.000 0.00 0.00 0.00 3.32
6389 7050 5.177696 GGCTTAACAACAACAACAACAACAA 59.822 36.000 0.00 0.00 0.00 2.83
6390 7051 4.686554 GGCTTAACAACAACAACAACAACA 59.313 37.500 0.00 0.00 0.00 3.33
6391 7052 4.686554 TGGCTTAACAACAACAACAACAAC 59.313 37.500 0.00 0.00 0.00 3.32
6392 7053 4.883083 TGGCTTAACAACAACAACAACAA 58.117 34.783 0.00 0.00 0.00 2.83
6393 7054 4.521130 TGGCTTAACAACAACAACAACA 57.479 36.364 0.00 0.00 0.00 3.33
6394 7055 5.350091 ACATTGGCTTAACAACAACAACAAC 59.650 36.000 0.00 0.00 32.39 3.32
6395 7056 5.482908 ACATTGGCTTAACAACAACAACAA 58.517 33.333 0.00 0.00 32.39 2.83
6396 7057 5.078411 ACATTGGCTTAACAACAACAACA 57.922 34.783 0.00 0.00 32.39 3.33
6397 7058 4.506288 GGACATTGGCTTAACAACAACAAC 59.494 41.667 0.00 0.00 32.39 3.32
6398 7059 4.160439 TGGACATTGGCTTAACAACAACAA 59.840 37.500 0.00 0.00 32.39 2.83
6399 7060 3.701542 TGGACATTGGCTTAACAACAACA 59.298 39.130 0.00 0.00 32.39 3.33
6400 7061 4.298332 CTGGACATTGGCTTAACAACAAC 58.702 43.478 0.00 0.00 32.39 3.32
6401 7062 3.243704 GCTGGACATTGGCTTAACAACAA 60.244 43.478 0.00 0.00 32.39 2.83
6402 7063 2.295909 GCTGGACATTGGCTTAACAACA 59.704 45.455 0.00 0.00 32.39 3.33
6403 7064 2.558359 AGCTGGACATTGGCTTAACAAC 59.442 45.455 0.00 0.00 32.39 3.32
6404 7065 2.875296 AGCTGGACATTGGCTTAACAA 58.125 42.857 0.00 0.00 31.81 2.83
6405 7066 2.584835 AGCTGGACATTGGCTTAACA 57.415 45.000 0.00 0.00 31.81 2.41
6406 7067 3.623510 GTCTAGCTGGACATTGGCTTAAC 59.376 47.826 23.90 0.00 37.50 2.01
6407 7068 3.678806 CGTCTAGCTGGACATTGGCTTAA 60.679 47.826 27.22 0.00 37.50 1.85
6408 7069 2.159099 CGTCTAGCTGGACATTGGCTTA 60.159 50.000 27.22 0.00 37.50 3.09
6409 7070 1.406069 CGTCTAGCTGGACATTGGCTT 60.406 52.381 27.22 0.00 37.50 4.35
6410 7071 0.176680 CGTCTAGCTGGACATTGGCT 59.823 55.000 27.22 0.00 39.74 4.75
6411 7072 0.175760 TCGTCTAGCTGGACATTGGC 59.824 55.000 27.22 2.21 36.12 4.52
6412 7073 2.672961 TTCGTCTAGCTGGACATTGG 57.327 50.000 27.22 12.80 36.12 3.16
6413 7074 2.791560 CGATTCGTCTAGCTGGACATTG 59.208 50.000 27.22 15.15 36.12 2.82
6414 7075 2.688446 TCGATTCGTCTAGCTGGACATT 59.312 45.455 27.22 12.69 36.12 2.71
6415 7076 2.033550 GTCGATTCGTCTAGCTGGACAT 59.966 50.000 27.22 15.60 36.12 3.06
6416 7077 1.400846 GTCGATTCGTCTAGCTGGACA 59.599 52.381 27.22 11.48 36.12 4.02
6417 7078 1.400846 TGTCGATTCGTCTAGCTGGAC 59.599 52.381 19.57 19.57 0.00 4.02
6418 7079 1.400846 GTGTCGATTCGTCTAGCTGGA 59.599 52.381 5.89 0.00 0.00 3.86
6419 7080 1.132453 TGTGTCGATTCGTCTAGCTGG 59.868 52.381 5.89 0.00 0.00 4.85
6420 7081 2.544480 TGTGTCGATTCGTCTAGCTG 57.456 50.000 5.89 0.00 0.00 4.24
6421 7082 3.378742 AGAATGTGTCGATTCGTCTAGCT 59.621 43.478 5.89 0.00 37.41 3.32
6422 7083 3.696898 AGAATGTGTCGATTCGTCTAGC 58.303 45.455 5.89 0.00 37.41 3.42
6423 7084 4.909894 TGAGAATGTGTCGATTCGTCTAG 58.090 43.478 5.89 0.00 37.41 2.43
6424 7085 4.634443 TCTGAGAATGTGTCGATTCGTCTA 59.366 41.667 5.89 0.00 37.41 2.59
6425 7086 3.440522 TCTGAGAATGTGTCGATTCGTCT 59.559 43.478 5.89 0.08 37.41 4.18
6426 7087 3.759418 TCTGAGAATGTGTCGATTCGTC 58.241 45.455 5.89 0.78 37.41 4.20
6427 7088 3.850122 TCTGAGAATGTGTCGATTCGT 57.150 42.857 5.89 0.00 37.41 3.85
6428 7089 3.000277 GCTTCTGAGAATGTGTCGATTCG 60.000 47.826 0.00 0.00 37.41 3.34
6429 7090 3.928992 TGCTTCTGAGAATGTGTCGATTC 59.071 43.478 0.00 0.00 33.21 2.52
6430 7091 3.930336 TGCTTCTGAGAATGTGTCGATT 58.070 40.909 0.00 0.00 0.00 3.34
6431 7092 3.599730 TGCTTCTGAGAATGTGTCGAT 57.400 42.857 0.00 0.00 0.00 3.59
6432 7093 3.059884 GTTGCTTCTGAGAATGTGTCGA 58.940 45.455 0.00 0.00 0.00 4.20
6433 7094 2.158449 GGTTGCTTCTGAGAATGTGTCG 59.842 50.000 0.00 0.00 0.00 4.35
6434 7095 2.158449 CGGTTGCTTCTGAGAATGTGTC 59.842 50.000 0.00 0.00 0.00 3.67
6435 7096 2.146342 CGGTTGCTTCTGAGAATGTGT 58.854 47.619 0.00 0.00 0.00 3.72
6436 7097 1.135859 GCGGTTGCTTCTGAGAATGTG 60.136 52.381 0.00 0.00 38.39 3.21
6437 7098 1.160137 GCGGTTGCTTCTGAGAATGT 58.840 50.000 0.00 0.00 38.39 2.71
6438 7099 1.159285 TGCGGTTGCTTCTGAGAATG 58.841 50.000 0.00 0.00 43.34 2.67
6439 7100 1.896220 TTGCGGTTGCTTCTGAGAAT 58.104 45.000 0.00 0.00 43.34 2.40
6440 7101 1.806542 GATTGCGGTTGCTTCTGAGAA 59.193 47.619 0.00 0.00 43.34 2.87
6441 7102 1.270785 TGATTGCGGTTGCTTCTGAGA 60.271 47.619 0.00 0.00 43.34 3.27
6442 7103 1.159285 TGATTGCGGTTGCTTCTGAG 58.841 50.000 0.00 0.00 43.34 3.35
6443 7104 1.603456 TTGATTGCGGTTGCTTCTGA 58.397 45.000 0.00 0.00 43.34 3.27
6444 7105 2.642139 ATTGATTGCGGTTGCTTCTG 57.358 45.000 0.00 0.00 43.34 3.02
6445 7106 3.578688 GAAATTGATTGCGGTTGCTTCT 58.421 40.909 0.00 0.00 43.34 2.85
6446 7107 2.667969 GGAAATTGATTGCGGTTGCTTC 59.332 45.455 0.00 0.00 43.34 3.86
6447 7108 2.299867 AGGAAATTGATTGCGGTTGCTT 59.700 40.909 0.00 0.00 43.34 3.91
6448 7109 1.895131 AGGAAATTGATTGCGGTTGCT 59.105 42.857 0.00 0.00 43.34 3.91
6449 7110 2.368655 AGGAAATTGATTGCGGTTGC 57.631 45.000 0.00 0.00 43.20 4.17
6450 7111 3.679502 GGAAAGGAAATTGATTGCGGTTG 59.320 43.478 0.00 0.00 34.01 3.77
6451 7112 3.323403 TGGAAAGGAAATTGATTGCGGTT 59.677 39.130 0.00 0.00 34.01 4.44
6452 7113 2.896685 TGGAAAGGAAATTGATTGCGGT 59.103 40.909 0.00 0.00 34.01 5.68
6453 7114 3.514645 CTGGAAAGGAAATTGATTGCGG 58.485 45.455 0.00 0.00 34.01 5.69
6454 7115 2.925563 GCTGGAAAGGAAATTGATTGCG 59.074 45.455 0.00 0.00 34.01 4.85
6455 7116 4.198028 AGCTGGAAAGGAAATTGATTGC 57.802 40.909 0.00 0.00 0.00 3.56


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.