Multiple sequence alignment - TraesCS5B01G411500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G411500 chr5B 100.000 5022 0 0 1 5022 586716722 586711701 0.000000e+00 9274.0
1 TraesCS5B01G411500 chr5B 89.352 1822 139 31 3189 4998 586465112 586466890 0.000000e+00 2239.0
2 TraesCS5B01G411500 chr5B 87.871 1484 162 10 1043 2525 586462947 586464413 0.000000e+00 1727.0
3 TraesCS5B01G411500 chr5B 87.131 1492 149 19 1058 2523 586530569 586532043 0.000000e+00 1652.0
4 TraesCS5B01G411500 chr5B 80.481 1455 172 54 3160 4547 586532070 586533479 0.000000e+00 1011.0
5 TraesCS5B01G411500 chr5B 90.820 512 37 5 2612 3122 586464586 586465088 0.000000e+00 676.0
6 TraesCS5B01G411500 chr5A 90.321 2273 149 23 2612 4873 597753891 597751679 0.000000e+00 2913.0
7 TraesCS5B01G411500 chr5A 87.990 1657 80 45 250 1866 597756125 597754548 0.000000e+00 1847.0
8 TraesCS5B01G411500 chr5A 87.163 1519 155 22 1026 2523 597748388 597746889 0.000000e+00 1688.0
9 TraesCS5B01G411500 chr5A 82.843 985 114 32 3115 4061 597746828 597745861 0.000000e+00 832.0
10 TraesCS5B01G411500 chr5A 93.238 488 33 0 2038 2525 597754552 597754065 0.000000e+00 719.0
11 TraesCS5B01G411500 chr5A 89.552 268 23 3 1 266 597757456 597757192 8.060000e-88 335.0
12 TraesCS5B01G411500 chr5A 80.916 131 13 9 4900 5022 597751498 597751372 5.350000e-15 93.5
13 TraesCS5B01G411500 chr5D 91.344 1883 90 23 664 2525 478742746 478740916 0.000000e+00 2507.0
14 TraesCS5B01G411500 chr5D 93.216 1312 68 8 2879 4187 478740526 478739233 0.000000e+00 1910.0
15 TraesCS5B01G411500 chr5D 85.856 1513 150 34 1035 2532 478703510 478702047 0.000000e+00 1550.0
16 TraesCS5B01G411500 chr5D 85.407 836 82 18 2612 3441 478701904 478701103 0.000000e+00 832.0
17 TraesCS5B01G411500 chr5D 89.003 682 50 14 1 674 478743435 478742771 0.000000e+00 821.0
18 TraesCS5B01G411500 chr5D 86.950 682 76 9 3437 4117 478701048 478700379 0.000000e+00 754.0
19 TraesCS5B01G411500 chr5D 91.705 434 34 2 4183 4615 478731126 478730694 7.190000e-168 601.0
20 TraesCS5B01G411500 chr5D 92.202 218 17 0 2612 2829 478740742 478740525 4.880000e-80 309.0
21 TraesCS5B01G411500 chr5D 82.759 203 24 9 31 231 330900473 330900280 2.400000e-38 171.0
22 TraesCS5B01G411500 chr5D 87.097 155 10 5 4836 4980 478730021 478729867 3.110000e-37 167.0
23 TraesCS5B01G411500 chr6A 76.886 822 154 31 1092 1901 21151161 21150364 2.780000e-117 433.0
24 TraesCS5B01G411500 chr2A 80.612 490 68 14 4448 4922 758278182 758277705 2.220000e-93 353.0
25 TraesCS5B01G411500 chr2A 88.000 175 20 1 58 232 657000740 657000913 6.590000e-49 206.0
26 TraesCS5B01G411500 chr2B 80.533 488 68 11 4448 4922 770066537 770066064 2.880000e-92 350.0
27 TraesCS5B01G411500 chr2D 90.338 207 17 3 27 232 79091391 79091595 8.290000e-68 268.0
28 TraesCS5B01G411500 chr2D 83.673 245 23 11 1 232 526159305 526159065 1.100000e-51 215.0
29 TraesCS5B01G411500 chr6D 84.034 238 24 10 1 229 302248040 302248272 3.040000e-52 217.0
30 TraesCS5B01G411500 chr6D 83.740 246 21 7 1 229 464534677 464534920 1.100000e-51 215.0
31 TraesCS5B01G411500 chr7B 80.992 242 32 10 1 232 380850106 380850343 3.990000e-41 180.0
32 TraesCS5B01G411500 chr3D 100.000 28 0 0 1662 1689 153167938 153167965 9.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G411500 chr5B 586711701 586716722 5021 True 9274.000000 9274 100.000000 1 5022 1 chr5B.!!$R1 5021
1 TraesCS5B01G411500 chr5B 586462947 586466890 3943 False 1547.333333 2239 89.347667 1043 4998 3 chr5B.!!$F1 3955
2 TraesCS5B01G411500 chr5B 586530569 586533479 2910 False 1331.500000 1652 83.806000 1058 4547 2 chr5B.!!$F2 3489
3 TraesCS5B01G411500 chr5A 597745861 597757456 11595 True 1203.928571 2913 87.431857 1 5022 7 chr5A.!!$R1 5021
4 TraesCS5B01G411500 chr5D 478739233 478743435 4202 True 1386.750000 2507 91.441250 1 4187 4 chr5D.!!$R4 4186
5 TraesCS5B01G411500 chr5D 478700379 478703510 3131 True 1045.333333 1550 86.071000 1035 4117 3 chr5D.!!$R2 3082
6 TraesCS5B01G411500 chr5D 478729867 478731126 1259 True 384.000000 601 89.401000 4183 4980 2 chr5D.!!$R3 797
7 TraesCS5B01G411500 chr6A 21150364 21151161 797 True 433.000000 433 76.886000 1092 1901 1 chr6A.!!$R1 809

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
371 1458 0.034896 CCGGCTGTGGAAGTACAAGT 59.965 55.0 0.00 0.0 0.00 3.16 F
835 1972 0.037303 CCACCCCCAGCATAGCATAG 59.963 60.0 0.00 0.0 0.00 2.23 F
909 2052 0.177141 TCCTCCGCGTAGGGAAATTG 59.823 55.0 18.48 0.0 46.37 2.32 F
2571 3831 0.107312 CACTTGGAGGCTGGGATGAG 60.107 60.0 0.00 0.0 0.00 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2118 3324 1.949525 CGTAAGGCCTCCATTGGAATG 59.050 52.381 5.23 2.31 36.17 2.67 R
2539 3799 0.386731 CCAAGTGCCGCTTTTTACCG 60.387 55.000 0.00 0.00 34.69 4.02 R
2591 3851 0.820226 TCCAGCAGAATCTCGTCCTG 59.180 55.000 0.00 0.00 0.00 3.86 R
4181 5632 0.036388 AGTTGGCCACTGGTACATCG 60.036 55.000 3.88 0.00 38.20 3.84 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 67 7.246311 AGTCTCAGATTTATCATTTTTGCACG 58.754 34.615 0.00 0.00 0.00 5.34
84 86 3.181510 GCACGACCCTCATTTCAATGTAC 60.182 47.826 0.00 0.00 37.65 2.90
87 89 5.181245 CACGACCCTCATTTCAATGTACTTT 59.819 40.000 0.00 0.00 37.65 2.66
91 93 4.414852 CCTCATTTCAATGTACTTTGCCG 58.585 43.478 14.93 5.25 37.65 5.69
268 1355 6.869913 CCAATCACATTCACTTTGTATTTGCT 59.130 34.615 0.00 0.00 0.00 3.91
291 1378 5.130292 AGCAATCTCAAAATGTTGGAGTG 57.870 39.130 9.06 9.06 35.22 3.51
311 1398 5.923204 AGTGTATCTTAGCATCAGGAAAGG 58.077 41.667 0.00 0.00 0.00 3.11
318 1405 6.644347 TCTTAGCATCAGGAAAGGAAGTAAG 58.356 40.000 0.00 0.00 0.00 2.34
319 1406 4.227864 AGCATCAGGAAAGGAAGTAAGG 57.772 45.455 0.00 0.00 0.00 2.69
326 1413 3.519913 AGGAAAGGAAGTAAGGTAGGCAG 59.480 47.826 0.00 0.00 0.00 4.85
371 1458 0.034896 CCGGCTGTGGAAGTACAAGT 59.965 55.000 0.00 0.00 0.00 3.16
374 1461 2.612972 CGGCTGTGGAAGTACAAGTGAT 60.613 50.000 0.00 0.00 0.00 3.06
375 1462 3.003480 GGCTGTGGAAGTACAAGTGATC 58.997 50.000 0.00 0.00 0.00 2.92
376 1463 2.668457 GCTGTGGAAGTACAAGTGATCG 59.332 50.000 0.00 0.00 0.00 3.69
377 1464 3.614150 GCTGTGGAAGTACAAGTGATCGA 60.614 47.826 0.00 0.00 0.00 3.59
381 1468 4.800993 GTGGAAGTACAAGTGATCGAGATG 59.199 45.833 0.00 0.00 0.00 2.90
384 1471 4.377839 AGTACAAGTGATCGAGATGTGG 57.622 45.455 0.00 0.00 0.00 4.17
386 1473 1.293924 CAAGTGATCGAGATGTGGGC 58.706 55.000 0.00 0.00 0.00 5.36
387 1474 1.134580 CAAGTGATCGAGATGTGGGCT 60.135 52.381 0.00 0.00 0.00 5.19
391 1478 1.035923 GATCGAGATGTGGGCTCTCA 58.964 55.000 0.00 0.00 39.29 3.27
394 1481 2.666317 TCGAGATGTGGGCTCTCATAA 58.334 47.619 0.06 0.00 39.29 1.90
438 1527 8.181573 ACTGCGTTGTTTGTCATAAAATATAGG 58.818 33.333 0.00 0.00 0.00 2.57
439 1528 8.270080 TGCGTTGTTTGTCATAAAATATAGGA 57.730 30.769 0.00 0.00 0.00 2.94
440 1529 8.394877 TGCGTTGTTTGTCATAAAATATAGGAG 58.605 33.333 0.00 0.00 0.00 3.69
441 1530 8.395633 GCGTTGTTTGTCATAAAATATAGGAGT 58.604 33.333 0.00 0.00 0.00 3.85
525 1618 1.827344 CAGCTGTACTGGTGGATGAGA 59.173 52.381 20.54 0.00 43.19 3.27
527 1620 3.110705 AGCTGTACTGGTGGATGAGAAT 58.889 45.455 3.44 0.00 0.00 2.40
565 1658 3.795688 AGAGCCTCCAAAAATCTGACA 57.204 42.857 0.00 0.00 0.00 3.58
585 1678 6.325596 TGACAGTCAGATTTAGAGTGAATCG 58.674 40.000 0.00 0.00 38.43 3.34
608 1705 7.748847 TCGGTATTTCTTCTGAAAGTTTATGC 58.251 34.615 0.00 0.00 44.25 3.14
615 1716 2.411748 TCTGAAAGTTTATGCGTCTGCG 59.588 45.455 0.00 0.00 38.81 5.18
634 1736 1.202031 CGCGGGTTTTATGCTGAGAAC 60.202 52.381 0.00 0.00 0.00 3.01
667 1769 2.615493 CCGGTCTGTTGTAGGATTGCTT 60.615 50.000 0.00 0.00 0.00 3.91
670 1772 4.072131 GGTCTGTTGTAGGATTGCTTCAA 58.928 43.478 0.00 0.00 0.00 2.69
689 1826 0.324614 ACACCATCGATGCACCAGAA 59.675 50.000 20.25 0.00 0.00 3.02
691 1828 2.019249 CACCATCGATGCACCAGAAAT 58.981 47.619 20.25 0.00 0.00 2.17
716 1853 3.838244 TCCTAATTTCACCTCCGATGG 57.162 47.619 0.00 0.00 0.00 3.51
754 1891 1.817357 TCAAGTCTTGCATCAGCCAG 58.183 50.000 7.78 0.00 41.13 4.85
755 1892 1.348696 TCAAGTCTTGCATCAGCCAGA 59.651 47.619 7.78 0.00 39.93 3.86
756 1893 1.738350 CAAGTCTTGCATCAGCCAGAG 59.262 52.381 0.00 0.00 42.49 3.35
757 1894 0.392729 AGTCTTGCATCAGCCAGAGC 60.393 55.000 0.00 0.00 42.49 4.09
758 1895 1.077930 TCTTGCATCAGCCAGAGCC 60.078 57.895 0.00 0.00 37.59 4.70
759 1896 2.044650 TTGCATCAGCCAGAGCCC 60.045 61.111 0.00 0.00 41.25 5.19
762 1899 2.996395 CATCAGCCAGAGCCCAGT 59.004 61.111 0.00 0.00 41.25 4.00
776 1913 2.738521 CAGTTCGTCTGCCACCCG 60.739 66.667 0.00 0.00 37.36 5.28
812 1949 0.764890 CTCCTTGTCCTTGTCCACCA 59.235 55.000 0.00 0.00 0.00 4.17
815 1952 0.182537 CTTGTCCTTGTCCACCACCA 59.817 55.000 0.00 0.00 0.00 4.17
819 1956 1.528309 CCTTGTCCACCACCACCAC 60.528 63.158 0.00 0.00 0.00 4.16
821 1958 2.976494 CTTGTCCACCACCACCACCC 62.976 65.000 0.00 0.00 0.00 4.61
822 1959 4.280019 GTCCACCACCACCACCCC 62.280 72.222 0.00 0.00 0.00 4.95
825 1962 4.284550 CACCACCACCACCCCCAG 62.285 72.222 0.00 0.00 0.00 4.45
828 1965 3.983420 CACCACCACCCCCAGCAT 61.983 66.667 0.00 0.00 0.00 3.79
829 1966 2.204228 ACCACCACCCCCAGCATA 60.204 61.111 0.00 0.00 0.00 3.14
830 1967 2.308722 ACCACCACCCCCAGCATAG 61.309 63.158 0.00 0.00 0.00 2.23
831 1968 2.124151 CACCACCCCCAGCATAGC 60.124 66.667 0.00 0.00 0.00 2.97
832 1969 2.613696 ACCACCCCCAGCATAGCA 60.614 61.111 0.00 0.00 0.00 3.49
833 1970 2.008723 ACCACCCCCAGCATAGCAT 61.009 57.895 0.00 0.00 0.00 3.79
834 1971 0.697511 ACCACCCCCAGCATAGCATA 60.698 55.000 0.00 0.00 0.00 3.14
835 1972 0.037303 CCACCCCCAGCATAGCATAG 59.963 60.000 0.00 0.00 0.00 2.23
836 1973 0.607489 CACCCCCAGCATAGCATAGC 60.607 60.000 0.00 0.00 0.00 2.97
837 1974 1.061905 ACCCCCAGCATAGCATAGCA 61.062 55.000 0.00 0.00 0.00 3.49
838 1975 0.330604 CCCCCAGCATAGCATAGCAT 59.669 55.000 0.00 0.00 0.00 3.79
889 2026 1.673665 CCTGTCCTGTGCAAGCTCC 60.674 63.158 0.00 0.00 0.00 4.70
907 2050 1.400530 CCTCCTCCGCGTAGGGAAAT 61.401 60.000 18.48 0.00 46.37 2.17
909 2052 0.177141 TCCTCCGCGTAGGGAAATTG 59.823 55.000 18.48 0.00 46.37 2.32
1019 2177 1.271127 GGCTCTGCTCCCTTTCTCCT 61.271 60.000 0.00 0.00 0.00 3.69
1071 2229 3.061848 CCCCACCGCAATGTCCAC 61.062 66.667 0.00 0.00 0.00 4.02
1242 2412 2.198304 AATGCCGACCCTGTTCCTCC 62.198 60.000 0.00 0.00 0.00 4.30
1256 2426 3.443925 CTCCTGCCGACGAGCTCA 61.444 66.667 15.40 0.00 0.00 4.26
1367 2537 1.452108 CTTGGGATCTTGGACGGCC 60.452 63.158 0.00 0.00 0.00 6.13
1414 2584 2.125753 GACGAGGACCTGCTGCTG 60.126 66.667 0.00 0.00 0.00 4.41
1640 2831 7.094377 GCAAGAAAGTCAATTATACCTTGTGGA 60.094 37.037 0.00 0.00 37.04 4.02
1662 2853 4.801330 TTAAGCACTTCATCGAGGAGAA 57.199 40.909 0.00 0.00 0.00 2.87
1663 2854 2.663826 AGCACTTCATCGAGGAGAAC 57.336 50.000 0.00 0.00 0.00 3.01
1664 2855 1.135257 AGCACTTCATCGAGGAGAACG 60.135 52.381 0.00 0.00 0.00 3.95
1666 2857 1.202582 CACTTCATCGAGGAGAACGGT 59.797 52.381 0.00 0.00 0.00 4.83
1716 2907 2.043450 CAGAGGAGAGGCCGAGGT 60.043 66.667 0.00 0.00 43.43 3.85
2080 3286 6.203723 GGTACAATATCAGAAGGATGCTTGAC 59.796 42.308 3.35 0.00 36.72 3.18
2150 3356 2.199117 CCTTACGGAGGCAGTAGCA 58.801 57.895 0.00 0.00 44.61 3.49
2163 3369 0.393537 AGTAGCATTGCTCTGCCACC 60.394 55.000 15.81 0.00 43.33 4.61
2419 3634 1.282248 TTTCGCTCTTCGTTCCGCAG 61.282 55.000 0.00 0.00 39.67 5.18
2459 3674 0.808125 TGAATACGCACAATGGTGGC 59.192 50.000 1.53 0.00 45.38 5.01
2479 3694 1.154205 AGCAATACTCGTCGGCATGC 61.154 55.000 9.90 9.90 0.00 4.06
2535 3795 6.861065 ACAACTTCATGTTACTGTTGTAGG 57.139 37.500 16.34 0.00 45.96 3.18
2536 3796 6.588204 ACAACTTCATGTTACTGTTGTAGGA 58.412 36.000 16.34 0.00 45.96 2.94
2539 3799 5.643777 ACTTCATGTTACTGTTGTAGGATGC 59.356 40.000 0.00 0.00 0.00 3.91
2542 3802 2.300723 TGTTACTGTTGTAGGATGCGGT 59.699 45.455 0.00 0.00 0.00 5.68
2551 3811 1.329599 GTAGGATGCGGTAAAAAGCGG 59.670 52.381 0.00 0.00 35.87 5.52
2571 3831 0.107312 CACTTGGAGGCTGGGATGAG 60.107 60.000 0.00 0.00 0.00 2.90
2572 3832 1.153005 CTTGGAGGCTGGGATGAGC 60.153 63.158 0.00 0.00 38.34 4.26
2591 3851 1.872313 GCCTGCAAGATGATACAGAGC 59.128 52.381 0.00 0.00 34.07 4.09
2592 3852 2.744166 GCCTGCAAGATGATACAGAGCA 60.744 50.000 0.00 0.00 34.07 4.26
2593 3853 3.132160 CCTGCAAGATGATACAGAGCAG 58.868 50.000 0.00 0.00 45.44 4.24
2604 3864 1.846007 ACAGAGCAGGACGAGATTCT 58.154 50.000 0.00 0.00 0.00 2.40
2624 3939 2.799412 CTGCTGGAAGAGACGCATATTC 59.201 50.000 0.00 0.00 34.07 1.75
2639 3954 3.496130 GCATATTCTGGAAGATGACACGG 59.504 47.826 18.34 0.00 46.36 4.94
2671 3989 6.405278 AATTCAGAAACCGTGAAGGATTTT 57.595 33.333 0.00 0.00 45.00 1.82
2698 4016 1.566231 AGATGGGCAGGAAAAGGTAGG 59.434 52.381 0.00 0.00 0.00 3.18
2768 4086 4.021719 CAGAGGCAATTTTGGTGAGTGAAT 60.022 41.667 0.00 0.00 0.00 2.57
2780 4101 6.325919 TGGTGAGTGAATTTGATAAACCAC 57.674 37.500 0.00 0.00 30.48 4.16
2813 4134 4.488879 GGTCACCAAGAATGAGCATTTTC 58.511 43.478 0.00 0.00 42.78 2.29
2851 4172 3.861113 GCTCGGTTGTTACGTATGATGAA 59.139 43.478 0.00 0.00 0.00 2.57
2882 4203 4.129380 CAGTTCAGAACATGGTGAAGTCA 58.871 43.478 15.85 0.00 34.71 3.41
2968 4289 4.015084 CAAATCTTCCAGACATCTTGGCT 58.985 43.478 0.00 0.00 34.86 4.75
3019 4340 0.941936 GAAAGGATAGCGAGGCGAGC 60.942 60.000 0.00 0.00 0.00 5.03
3156 4492 2.107204 AGTCCAAGGATATCATGGTGCC 59.893 50.000 20.29 12.65 35.66 5.01
3275 4614 8.779354 AACTAATGTTGATGTCTTAGAAGGAC 57.221 34.615 0.00 0.00 34.71 3.85
3341 4684 0.109039 GAGAGCGAAGGTGGACAGAC 60.109 60.000 0.00 0.00 39.88 3.51
3480 4891 8.884124 TCCTTTTTCTAGGAAACAATGATGAT 57.116 30.769 0.00 0.00 41.33 2.45
3500 4914 7.767659 TGATGATGCATCTTATAATGGTCTAGC 59.232 37.037 26.32 5.76 41.06 3.42
3521 4935 4.403432 AGCACATGGAAATAATGAACTGGG 59.597 41.667 0.00 0.00 0.00 4.45
3531 4945 2.777832 ATGAACTGGGCAAGAGAGTC 57.222 50.000 0.00 0.00 0.00 3.36
3705 5120 3.804036 TCGAGAAGCAGAAAAGGTTGAA 58.196 40.909 0.00 0.00 0.00 2.69
3830 5258 0.800631 GCGGTAGCTTGGGTGTTTAC 59.199 55.000 0.00 0.00 41.01 2.01
3892 5320 1.401905 GTCTTGCCGGTGAAATGATCC 59.598 52.381 1.90 0.00 0.00 3.36
3951 5396 8.840200 TCTTACATCCTACCTTAAACTCTGAT 57.160 34.615 0.00 0.00 0.00 2.90
3952 5397 9.268282 TCTTACATCCTACCTTAAACTCTGATT 57.732 33.333 0.00 0.00 0.00 2.57
4019 5468 5.304614 TCAGGGGAATACATAACTGCTAGTC 59.695 44.000 0.00 0.00 0.00 2.59
4039 5488 7.652507 GCTAGTCTGTTTGGTGGTATAGATAAC 59.347 40.741 0.00 0.00 0.00 1.89
4061 5510 6.791887 ACCGATATGCAATCTTCACATTAG 57.208 37.500 0.00 0.00 0.00 1.73
4142 5593 9.278978 TGACTTACATAAAACAAGCTGATTACA 57.721 29.630 0.00 0.00 0.00 2.41
4162 5613 8.709386 ATTACATCAGTTAGCTGTGACTTAAG 57.291 34.615 6.47 0.00 43.05 1.85
4191 5642 3.062639 GTGCTTCACAATCGATGTACCAG 59.937 47.826 0.00 0.00 41.46 4.00
4240 5708 4.314740 ACCGAGAATTCTGTCATAGAGC 57.685 45.455 14.00 0.00 36.61 4.09
4273 5741 5.150715 ACTAGGACATGAGCTCATTGGATA 58.849 41.667 26.70 15.36 33.61 2.59
4292 5760 6.228258 TGGATAAATGGAGTCGGCTAATAAC 58.772 40.000 0.00 0.00 0.00 1.89
4323 5794 5.302568 GCAGATTTGGGATGTGGATATTTGA 59.697 40.000 0.00 0.00 0.00 2.69
4420 5896 7.984422 ACTCATCTGTACTATCATCTCTGAG 57.016 40.000 0.00 0.00 34.12 3.35
4472 5959 8.257602 TGTTCTATTAGCACACCAGGATTATA 57.742 34.615 0.00 0.00 0.00 0.98
4490 5977 7.240616 AGGATTATATTCTTGCTTATCCCTGGT 59.759 37.037 0.00 0.00 32.39 4.00
4496 5984 2.057137 TGCTTATCCCTGGTGCATTC 57.943 50.000 0.00 0.00 0.00 2.67
4497 5985 1.284491 TGCTTATCCCTGGTGCATTCA 59.716 47.619 0.00 0.00 0.00 2.57
4498 5986 1.678101 GCTTATCCCTGGTGCATTCAC 59.322 52.381 0.00 0.00 42.40 3.18
4548 6036 7.187824 AGGAACTTTACTATGCAGAGAATGA 57.812 36.000 16.75 0.00 27.25 2.57
4555 6043 7.488187 TTACTATGCAGAGAATGAATTGAGC 57.512 36.000 16.75 0.00 0.00 4.26
4559 6047 3.181490 TGCAGAGAATGAATTGAGCATGC 60.181 43.478 10.51 10.51 0.00 4.06
4622 6164 8.721478 TCAGAACTGCTCAAAGTTATTTATGTC 58.279 33.333 0.00 0.00 40.48 3.06
4623 6165 8.506437 CAGAACTGCTCAAAGTTATTTATGTCA 58.494 33.333 0.00 0.00 40.48 3.58
4661 6203 8.593492 AAAATTGTTTGAGAATGCTTACCTTC 57.407 30.769 0.00 0.00 0.00 3.46
4678 6220 2.824341 CCTTCTCTTTCATTGCAAGGCT 59.176 45.455 6.15 0.00 0.00 4.58
4696 6238 3.135530 AGGCTAGACTCCATAAGCAAAGG 59.864 47.826 0.00 0.00 36.68 3.11
4715 6257 2.021457 GGTGTGTAGGCGCCAATAAAT 58.979 47.619 31.54 9.39 38.79 1.40
4769 6311 3.007831 TCATACAGTGCAGACATCCACAA 59.992 43.478 0.00 0.00 34.48 3.33
4790 6334 7.173218 CCACAACTAGTCTTCTAAAAGCAATCA 59.827 37.037 0.00 0.00 32.18 2.57
4796 6340 6.291377 AGTCTTCTAAAAGCAATCACACTCA 58.709 36.000 0.00 0.00 32.18 3.41
4799 6343 5.784750 TCTAAAAGCAATCACACTCATCG 57.215 39.130 0.00 0.00 0.00 3.84
4812 6359 6.504398 TCACACTCATCGTATGTATTCCTTC 58.496 40.000 0.00 0.00 0.00 3.46
4822 6369 7.650890 TCGTATGTATTCCTTCGCTATTACAA 58.349 34.615 0.00 0.00 0.00 2.41
4831 6378 8.902540 TTCCTTCGCTATTACAATGACAATAT 57.097 30.769 0.00 0.00 0.00 1.28
4934 7068 1.972872 CACCATCAGCTAACCATCCC 58.027 55.000 0.00 0.00 0.00 3.85
4935 7069 1.492176 CACCATCAGCTAACCATCCCT 59.508 52.381 0.00 0.00 0.00 4.20
4949 7088 2.751806 CCATCCCTGACAAGAAAAGCTC 59.248 50.000 0.00 0.00 0.00 4.09
4964 7108 2.060050 AGCTCGTAGCCACTCTGTAT 57.940 50.000 3.66 0.00 43.77 2.29
4965 7109 1.950909 AGCTCGTAGCCACTCTGTATC 59.049 52.381 3.66 0.00 43.77 2.24
5010 7154 2.084546 GCATAACCGAGACCAAGCTTT 58.915 47.619 0.00 0.00 0.00 3.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
14 15 7.931015 TTAACACATGATAATCCTCCTAGGT 57.069 36.000 9.08 0.00 36.53 3.08
43 44 7.243487 GTCGTGCAAAAATGATAAATCTGAGA 58.757 34.615 0.00 0.00 0.00 3.27
53 54 2.513753 TGAGGGTCGTGCAAAAATGAT 58.486 42.857 0.00 0.00 0.00 2.45
56 57 3.320541 TGAAATGAGGGTCGTGCAAAAAT 59.679 39.130 0.00 0.00 0.00 1.82
66 67 5.402398 GCAAAGTACATTGAAATGAGGGTC 58.598 41.667 14.72 0.00 39.67 4.46
84 86 5.040635 AGTGTGTAAATTTTCACGGCAAAG 58.959 37.500 19.16 0.00 37.38 2.77
87 89 4.142359 ACAAGTGTGTAAATTTTCACGGCA 60.142 37.500 19.16 3.65 35.72 5.69
192 196 1.078143 GAGCTCCAATGAGGCCGTT 60.078 57.895 0.87 0.00 39.14 4.44
240 244 6.764308 ATACAAAGTGAATGTGATTGGGAG 57.236 37.500 0.00 0.00 32.27 4.30
268 1355 5.769662 ACACTCCAACATTTTGAGATTGCTA 59.230 36.000 0.00 0.00 34.24 3.49
291 1378 6.587273 ACTTCCTTTCCTGATGCTAAGATAC 58.413 40.000 0.00 0.00 0.00 2.24
311 1398 0.180642 GCCCCTGCCTACCTTACTTC 59.819 60.000 0.00 0.00 0.00 3.01
318 1405 1.144913 TGAATATTGCCCCTGCCTACC 59.855 52.381 0.00 0.00 36.33 3.18
319 1406 2.106511 TCTGAATATTGCCCCTGCCTAC 59.893 50.000 0.00 0.00 36.33 3.18
326 1413 4.457257 GCTCTATGTTCTGAATATTGCCCC 59.543 45.833 4.94 0.00 0.00 5.80
361 1448 4.800993 CCACATCTCGATCACTTGTACTTC 59.199 45.833 0.00 0.00 0.00 3.01
364 1451 3.448686 CCCACATCTCGATCACTTGTAC 58.551 50.000 0.00 0.00 0.00 2.90
371 1458 1.035923 GAGAGCCCACATCTCGATCA 58.964 55.000 0.00 0.00 34.32 2.92
374 1461 2.364972 TATGAGAGCCCACATCTCGA 57.635 50.000 0.00 0.00 45.10 4.04
375 1462 3.459232 TTTATGAGAGCCCACATCTCG 57.541 47.619 0.00 0.00 45.10 4.04
403 1490 3.630312 ACAAACAACGCAGTATTTCCACT 59.370 39.130 0.00 0.00 45.00 4.00
435 1524 9.132923 CACTTGTATTTCCATCTACTACTCCTA 57.867 37.037 0.00 0.00 0.00 2.94
436 1525 7.839705 TCACTTGTATTTCCATCTACTACTCCT 59.160 37.037 0.00 0.00 0.00 3.69
437 1526 8.008513 TCACTTGTATTTCCATCTACTACTCC 57.991 38.462 0.00 0.00 0.00 3.85
439 1528 9.823647 CAATCACTTGTATTTCCATCTACTACT 57.176 33.333 0.00 0.00 0.00 2.57
440 1529 9.817809 TCAATCACTTGTATTTCCATCTACTAC 57.182 33.333 0.00 0.00 33.87 2.73
442 1531 8.762645 TCTCAATCACTTGTATTTCCATCTACT 58.237 33.333 0.00 0.00 33.87 2.57
443 1532 8.948631 TCTCAATCACTTGTATTTCCATCTAC 57.051 34.615 0.00 0.00 33.87 2.59
516 1609 2.879002 TCTCGCAGATTCTCATCCAC 57.121 50.000 0.00 0.00 33.89 4.02
521 1614 3.187227 GCTTTGTTTCTCGCAGATTCTCA 59.813 43.478 0.00 0.00 33.89 3.27
525 1618 3.565482 TCTTGCTTTGTTTCTCGCAGATT 59.435 39.130 0.00 0.00 33.89 2.40
527 1620 2.545526 CTCTTGCTTTGTTTCTCGCAGA 59.454 45.455 0.00 0.00 33.48 4.26
565 1658 5.923733 ACCGATTCACTCTAAATCTGACT 57.076 39.130 0.00 0.00 32.15 3.41
576 1669 7.332182 ACTTTCAGAAGAAATACCGATTCACTC 59.668 37.037 0.00 0.00 42.49 3.51
585 1678 7.527457 ACGCATAAACTTTCAGAAGAAATACC 58.473 34.615 0.00 0.00 42.49 2.73
608 1705 1.060308 CATAAAACCCGCGCAGACG 59.940 57.895 8.75 0.00 44.07 4.18
615 1716 2.084546 AGTTCTCAGCATAAAACCCGC 58.915 47.619 0.00 0.00 0.00 6.13
667 1769 0.036022 TGGTGCATCGATGGTGTTGA 59.964 50.000 26.00 0.00 0.00 3.18
670 1772 0.324614 TTCTGGTGCATCGATGGTGT 59.675 50.000 26.00 0.00 0.00 4.16
689 1826 5.366768 TCGGAGGTGAAATTAGGATCTCATT 59.633 40.000 0.00 0.00 0.00 2.57
691 1828 4.286707 TCGGAGGTGAAATTAGGATCTCA 58.713 43.478 0.00 0.00 0.00 3.27
732 1869 1.674962 GGCTGATGCAAGACTTGATCC 59.325 52.381 19.51 6.77 41.91 3.36
741 1878 2.119655 GGGCTCTGGCTGATGCAAG 61.120 63.158 14.21 0.00 41.55 4.01
754 1891 2.435059 GGCAGACGAACTGGGCTC 60.435 66.667 13.82 0.00 45.82 4.70
755 1892 3.241530 TGGCAGACGAACTGGGCT 61.242 61.111 13.82 0.00 45.82 5.19
756 1893 3.050275 GTGGCAGACGAACTGGGC 61.050 66.667 13.82 8.83 45.82 5.36
757 1894 2.358737 GGTGGCAGACGAACTGGG 60.359 66.667 13.82 0.00 45.82 4.45
758 1895 2.358737 GGGTGGCAGACGAACTGG 60.359 66.667 13.82 0.36 45.82 4.00
762 1899 3.228017 TGACGGGTGGCAGACGAA 61.228 61.111 16.35 2.99 0.00 3.85
812 1949 2.204228 TATGCTGGGGGTGGTGGT 60.204 61.111 0.00 0.00 0.00 4.16
815 1952 0.697511 TATGCTATGCTGGGGGTGGT 60.698 55.000 0.00 0.00 0.00 4.16
819 1956 0.330604 ATGCTATGCTATGCTGGGGG 59.669 55.000 0.00 0.00 0.00 5.40
821 1958 4.063689 GCTATATGCTATGCTATGCTGGG 58.936 47.826 0.00 0.00 38.95 4.45
822 1959 4.700700 TGCTATATGCTATGCTATGCTGG 58.299 43.478 0.00 0.00 43.37 4.85
823 1960 5.179555 CCATGCTATATGCTATGCTATGCTG 59.820 44.000 0.00 0.00 43.37 4.41
824 1961 5.306394 CCATGCTATATGCTATGCTATGCT 58.694 41.667 0.00 0.00 43.37 3.79
825 1962 4.454847 CCCATGCTATATGCTATGCTATGC 59.545 45.833 0.00 0.00 43.37 3.14
826 1963 4.454847 GCCCATGCTATATGCTATGCTATG 59.545 45.833 0.00 0.00 43.37 2.23
827 1964 4.103627 TGCCCATGCTATATGCTATGCTAT 59.896 41.667 0.00 0.00 43.37 2.97
828 1965 3.455543 TGCCCATGCTATATGCTATGCTA 59.544 43.478 0.00 0.00 43.37 3.49
829 1966 2.240414 TGCCCATGCTATATGCTATGCT 59.760 45.455 0.00 0.00 43.37 3.79
830 1967 2.646930 TGCCCATGCTATATGCTATGC 58.353 47.619 0.00 0.00 43.37 3.14
831 1968 3.568430 CCATGCCCATGCTATATGCTATG 59.432 47.826 2.75 0.00 43.37 2.23
832 1969 3.828921 CCATGCCCATGCTATATGCTAT 58.171 45.455 2.75 0.00 43.37 2.97
833 1970 2.684630 GCCATGCCCATGCTATATGCTA 60.685 50.000 2.75 0.00 43.37 3.49
834 1971 1.958549 GCCATGCCCATGCTATATGCT 60.959 52.381 2.75 0.00 43.37 3.79
835 1972 0.458669 GCCATGCCCATGCTATATGC 59.541 55.000 2.75 0.00 43.25 3.14
836 1973 1.842052 TGCCATGCCCATGCTATATG 58.158 50.000 2.75 0.00 37.49 1.78
837 1974 2.173519 GTTGCCATGCCCATGCTATAT 58.826 47.619 2.75 0.00 37.49 0.86
838 1975 1.133544 TGTTGCCATGCCCATGCTATA 60.134 47.619 2.75 0.00 37.49 1.31
861 1998 2.561419 GCACAGGACAGGAGTAGTTGTA 59.439 50.000 0.00 0.00 0.00 2.41
862 1999 1.344763 GCACAGGACAGGAGTAGTTGT 59.655 52.381 0.00 0.00 0.00 3.32
863 2000 1.344438 TGCACAGGACAGGAGTAGTTG 59.656 52.381 0.00 0.00 0.00 3.16
864 2001 1.717032 TGCACAGGACAGGAGTAGTT 58.283 50.000 0.00 0.00 0.00 2.24
865 2002 1.620819 CTTGCACAGGACAGGAGTAGT 59.379 52.381 0.00 0.00 0.00 2.73
889 2026 0.464452 AATTTCCCTACGCGGAGGAG 59.536 55.000 39.28 27.03 39.15 3.69
909 2052 0.790866 GAAAGTGAATGCGCGTCAGC 60.791 55.000 13.34 8.94 40.74 4.26
1000 2158 1.223211 GGAGAAAGGGAGCAGAGCC 59.777 63.158 0.00 0.00 0.00 4.70
1019 2177 2.128507 GGTTGGGGTTTTCACGGCA 61.129 57.895 0.00 0.00 0.00 5.69
1159 2317 3.787001 GGGAGGAGGAAGTGGGCG 61.787 72.222 0.00 0.00 0.00 6.13
1256 2426 3.300765 GTCCGTCCACTCCACCGT 61.301 66.667 0.00 0.00 0.00 4.83
1337 2507 2.215451 ATCCCAAGCTTCCGCCACAT 62.215 55.000 0.00 0.00 36.60 3.21
1394 2564 2.997315 CAGCAGGTCCTCGTCCCA 60.997 66.667 0.00 0.00 0.00 4.37
1414 2584 3.793144 CAGAAACCCGCGAGCTGC 61.793 66.667 8.23 0.00 41.47 5.25
1640 2831 5.112686 GTTCTCCTCGATGAAGTGCTTAAT 58.887 41.667 0.00 0.00 0.00 1.40
1716 2907 2.747460 GCTCGAGCAATGTGGCCA 60.747 61.111 31.91 0.00 41.59 5.36
2080 3286 2.836360 GCATGGATGTGCCCAGGG 60.836 66.667 0.00 0.00 39.97 4.45
2118 3324 1.949525 CGTAAGGCCTCCATTGGAATG 59.050 52.381 5.23 2.31 36.17 2.67
2119 3325 2.348411 CGTAAGGCCTCCATTGGAAT 57.652 50.000 5.23 0.00 0.00 3.01
2163 3369 4.673375 AGCAGCCACCCTTGCCTG 62.673 66.667 0.00 0.00 0.00 4.85
2459 3674 0.578683 CATGCCGACGAGTATTGCTG 59.421 55.000 0.00 0.00 0.00 4.41
2479 3694 0.594028 CATTAGCAATGGCAGCAGCG 60.594 55.000 0.00 0.00 44.61 5.18
2525 3740 3.688694 TTTACCGCATCCTACAACAGT 57.311 42.857 0.00 0.00 0.00 3.55
2535 3795 0.796870 GTGCCGCTTTTTACCGCATC 60.797 55.000 0.00 0.00 0.00 3.91
2536 3796 1.211709 GTGCCGCTTTTTACCGCAT 59.788 52.632 0.00 0.00 0.00 4.73
2539 3799 0.386731 CCAAGTGCCGCTTTTTACCG 60.387 55.000 0.00 0.00 34.69 4.02
2542 3802 1.243902 CCTCCAAGTGCCGCTTTTTA 58.756 50.000 0.00 0.00 34.69 1.52
2551 3811 1.751927 CATCCCAGCCTCCAAGTGC 60.752 63.158 0.00 0.00 0.00 4.40
2571 3831 1.872313 GCTCTGTATCATCTTGCAGGC 59.128 52.381 0.00 0.00 0.00 4.85
2572 3832 3.132160 CTGCTCTGTATCATCTTGCAGG 58.868 50.000 0.00 0.00 41.59 4.85
2591 3851 0.820226 TCCAGCAGAATCTCGTCCTG 59.180 55.000 0.00 0.00 0.00 3.86
2592 3852 1.480137 CTTCCAGCAGAATCTCGTCCT 59.520 52.381 0.00 0.00 32.82 3.85
2593 3853 1.478510 TCTTCCAGCAGAATCTCGTCC 59.521 52.381 0.00 0.00 32.82 4.79
2604 3864 2.432146 AGAATATGCGTCTCTTCCAGCA 59.568 45.455 0.00 0.00 44.13 4.41
2624 3939 1.466167 CTTTGCCGTGTCATCTTCCAG 59.534 52.381 0.00 0.00 0.00 3.86
2639 3954 3.555547 ACGGTTTCTGAATTTTGCTTTGC 59.444 39.130 0.00 0.00 0.00 3.68
2753 4071 8.428063 TGGTTTATCAAATTCACTCACCAAAAT 58.572 29.630 0.00 0.00 0.00 1.82
2837 4158 9.088512 ACTGAGATTCTTTTCATCATACGTAAC 57.911 33.333 0.00 0.00 0.00 2.50
2851 4172 6.206243 CACCATGTTCTGAACTGAGATTCTTT 59.794 38.462 20.18 0.00 0.00 2.52
2968 4289 6.806668 TCATCCAACTCATTACCACTGATA 57.193 37.500 0.00 0.00 0.00 2.15
3133 4469 3.657634 CACCATGATATCCTTGGACTCG 58.342 50.000 22.27 8.74 41.31 4.18
3186 4525 1.281867 TGAGGGTGCTATCACTTTGGG 59.718 52.381 0.00 0.00 42.72 4.12
3293 4636 0.451383 TCTGCCATTACATTGCGTGC 59.549 50.000 0.00 0.00 0.00 5.34
3478 4889 6.875726 TGTGCTAGACCATTATAAGATGCATC 59.124 38.462 19.37 19.37 0.00 3.91
3479 4890 6.772605 TGTGCTAGACCATTATAAGATGCAT 58.227 36.000 0.00 0.00 0.00 3.96
3480 4891 6.173427 TGTGCTAGACCATTATAAGATGCA 57.827 37.500 0.00 0.00 0.00 3.96
3500 4914 4.160065 TGCCCAGTTCATTATTTCCATGTG 59.840 41.667 0.00 0.00 0.00 3.21
3521 4935 8.224437 GTGTTTTAGTAGAAATGACTCTCTTGC 58.776 37.037 0.00 0.00 0.00 4.01
3741 5156 4.082523 TGCACCTCTAGCGCCACC 62.083 66.667 2.29 0.00 33.85 4.61
3892 5320 3.937079 TGCACTCACAATTAGCTGATGAG 59.063 43.478 0.00 0.78 42.07 2.90
4019 5468 5.909477 TCGGTTATCTATACCACCAAACAG 58.091 41.667 0.00 0.00 35.31 3.16
4039 5488 6.400409 CGTCTAATGTGAAGATTGCATATCGG 60.400 42.308 0.00 0.00 0.00 4.18
4061 5510 1.647702 GTCTTCGTCAAATCGGTCGTC 59.352 52.381 0.00 0.00 0.00 4.20
4098 5549 8.836413 TGTAAGTCAAAAGATCAGTTAACAAGG 58.164 33.333 8.61 0.00 0.00 3.61
4181 5632 0.036388 AGTTGGCCACTGGTACATCG 60.036 55.000 3.88 0.00 38.20 3.84
4191 5642 1.880027 CTTGGTACAGAAGTTGGCCAC 59.120 52.381 3.88 0.00 42.39 5.01
4240 5708 5.105146 AGCTCATGTCCTAGTAGGTTGAAAG 60.105 44.000 16.02 10.29 36.53 2.62
4273 5741 4.395959 TCGTTATTAGCCGACTCCATTT 57.604 40.909 0.00 0.00 0.00 2.32
4292 5760 1.938577 CATCCCAAATCTGCTGAGTCG 59.061 52.381 0.00 0.00 0.00 4.18
4295 5763 2.022195 CCACATCCCAAATCTGCTGAG 58.978 52.381 0.00 0.00 0.00 3.35
4472 5959 2.025037 TGCACCAGGGATAAGCAAGAAT 60.025 45.455 0.00 0.00 31.42 2.40
4490 5977 4.320421 CCTCAACTTTGAATCGTGAATGCA 60.320 41.667 0.00 0.00 36.64 3.96
4496 5984 3.070018 AGCTCCTCAACTTTGAATCGTG 58.930 45.455 0.00 0.00 36.64 4.35
4497 5985 3.409026 AGCTCCTCAACTTTGAATCGT 57.591 42.857 0.00 0.00 36.64 3.73
4498 5986 3.308323 GCTAGCTCCTCAACTTTGAATCG 59.692 47.826 7.70 0.00 36.64 3.34
4559 6047 2.019249 CTGTGTCCATACAGCCATTGG 58.981 52.381 0.00 0.00 41.31 3.16
4581 6069 5.503194 GCAGTTCTGAAGTTCTGTTCAACTC 60.503 44.000 4.17 2.10 35.45 3.01
4635 6177 8.962884 AAGGTAAGCATTCTCAAACAATTTTT 57.037 26.923 0.00 0.00 0.00 1.94
4636 6178 8.424133 AGAAGGTAAGCATTCTCAAACAATTTT 58.576 29.630 0.00 0.00 41.26 1.82
4637 6179 7.955918 AGAAGGTAAGCATTCTCAAACAATTT 58.044 30.769 0.00 0.00 41.26 1.82
4638 6180 7.530426 AGAAGGTAAGCATTCTCAAACAATT 57.470 32.000 0.00 0.00 41.26 2.32
4661 6203 4.260170 AGTCTAGCCTTGCAATGAAAGAG 58.740 43.478 1.72 0.00 0.00 2.85
4678 6220 4.286032 ACACACCTTTGCTTATGGAGTCTA 59.714 41.667 0.00 0.00 0.00 2.59
4696 6238 5.432885 AATATTTATTGGCGCCTACACAC 57.567 39.130 29.70 0.00 0.00 3.82
4769 6311 7.445945 AGTGTGATTGCTTTTAGAAGACTAGT 58.554 34.615 0.00 0.00 34.71 2.57
4790 6334 5.520632 CGAAGGAATACATACGATGAGTGT 58.479 41.667 0.00 0.00 0.00 3.55
4796 6340 7.823665 TGTAATAGCGAAGGAATACATACGAT 58.176 34.615 0.00 0.00 0.00 3.73
4799 6343 9.419297 TCATTGTAATAGCGAAGGAATACATAC 57.581 33.333 0.00 0.00 0.00 2.39
4822 6369 7.005902 TCACCCAGCATGATAAATATTGTCAT 58.994 34.615 0.00 9.62 41.42 3.06
4831 6378 4.406456 ACAAGTTCACCCAGCATGATAAA 58.594 39.130 0.00 0.00 39.69 1.40
4840 6387 7.915397 GCAACATAATATTACAAGTTCACCCAG 59.085 37.037 0.00 0.00 0.00 4.45
4898 7032 4.145365 TGGTGCACTTATATGGTGGTAC 57.855 45.455 17.98 0.00 35.47 3.34
4934 7068 2.413453 GGCTACGAGCTTTTCTTGTCAG 59.587 50.000 6.78 0.00 41.99 3.51
4935 7069 2.224185 TGGCTACGAGCTTTTCTTGTCA 60.224 45.455 6.78 0.00 41.99 3.58


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.