Multiple sequence alignment - TraesCS5B01G404500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G404500 chr5B 100.000 2654 0 0 1 2654 580493021 580495674 0.000000e+00 4902.0
1 TraesCS5B01G404500 chr5A 93.885 1341 56 13 3 1330 593081445 593082772 0.000000e+00 1999.0
2 TraesCS5B01G404500 chr5A 89.583 384 27 7 1911 2293 593084153 593084524 2.390000e-130 475.0
3 TraesCS5B01G404500 chr5A 96.833 221 4 2 1526 1743 593082774 593082994 1.500000e-97 366.0
4 TraesCS5B01G404500 chr5D 96.215 634 20 2 3 632 473099735 473100368 0.000000e+00 1035.0
5 TraesCS5B01G404500 chr5D 93.196 485 23 5 1831 2309 473100380 473100860 0.000000e+00 704.0
6 TraesCS5B01G404500 chr5D 92.237 219 7 3 2436 2654 473114000 473114208 4.290000e-78 302.0
7 TraesCS5B01G404500 chr2B 78.261 138 22 5 1032 1166 36495602 36495734 6.090000e-12 82.4
8 TraesCS5B01G404500 chr2B 78.030 132 22 4 1038 1166 365985155 365985282 2.830000e-10 76.8
9 TraesCS5B01G404500 chr7B 87.692 65 6 2 1032 1096 603819727 603819665 1.020000e-09 75.0
10 TraesCS5B01G404500 chr2A 95.349 43 1 1 1032 1074 81173067 81173108 1.700000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G404500 chr5B 580493021 580495674 2653 False 4902.000000 4902 100.000000 1 2654 1 chr5B.!!$F1 2653
1 TraesCS5B01G404500 chr5A 593081445 593084524 3079 False 946.666667 1999 93.433667 3 2293 3 chr5A.!!$F1 2290
2 TraesCS5B01G404500 chr5D 473099735 473100860 1125 False 869.500000 1035 94.705500 3 2309 2 chr5D.!!$F2 2306

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
398 401 1.035139 GGTTGGGCCTGATTGCTATG 58.965 55.000 4.53 0.0 0.00 2.23 F
1032 1037 1.067142 TGGTGGCTTGACACTATCGAC 60.067 52.381 6.56 0.0 41.09 4.20 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1445 1461 0.034670 AATCTCCTTCAGCTGGCACC 60.035 55.0 15.13 0.0 0.0 5.01 R
2598 3650 0.026027 CGAGCAGACCGACGTACTAC 59.974 60.0 0.00 0.0 0.0 2.73 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
82 83 3.326006 TCAGAAAGTTCCTGATCAGCAGT 59.674 43.478 17.76 5.96 43.33 4.40
398 401 1.035139 GGTTGGGCCTGATTGCTATG 58.965 55.000 4.53 0.00 0.00 2.23
415 418 2.344093 ATGGTCCCTCAACCTACTGT 57.656 50.000 0.00 0.00 40.20 3.55
464 467 8.227507 AGCAATATTATCAGTAGGGTTCCAAAT 58.772 33.333 0.00 0.00 0.00 2.32
480 483 2.156917 CAAATGTGCTGAGAGAAGGCA 58.843 47.619 0.00 0.00 0.00 4.75
516 519 7.285401 TGATCATTTTAATACCTTGGGAGCTTC 59.715 37.037 0.00 0.00 0.00 3.86
541 544 3.900941 AGCACCGAAATGATTGTGTTTC 58.099 40.909 0.00 0.00 0.00 2.78
608 611 3.248024 AGAGTGGTTTATGGTGTCTGGA 58.752 45.455 0.00 0.00 0.00 3.86
675 680 4.202472 GGACTCTTATTATTGGGGAGGTGG 60.202 50.000 0.00 0.00 0.00 4.61
696 701 1.796459 CCTGGTCGTGGTCGTTTAAAG 59.204 52.381 0.00 0.00 38.33 1.85
703 708 5.349543 GGTCGTGGTCGTTTAAAGTTCATAT 59.650 40.000 0.00 0.00 38.33 1.78
704 709 6.128472 GGTCGTGGTCGTTTAAAGTTCATATT 60.128 38.462 0.00 0.00 38.33 1.28
745 750 1.748879 GTGTGTGTGCTGGGTGTGT 60.749 57.895 0.00 0.00 0.00 3.72
774 779 2.043801 AGTAGTCTCTTTGGCCTCTCCT 59.956 50.000 3.32 0.00 35.26 3.69
812 817 6.108687 TCTCTCTTAACGAAATGACATGCAT 58.891 36.000 0.00 0.00 39.43 3.96
884 889 3.402110 AGCACTTGATGACACGATTGAA 58.598 40.909 0.00 0.00 0.00 2.69
886 891 4.083643 AGCACTTGATGACACGATTGAAAG 60.084 41.667 0.00 0.00 0.00 2.62
918 923 4.285807 TCATGGTTTGTTCACTTTCACG 57.714 40.909 0.00 0.00 0.00 4.35
956 961 6.018262 GTGCTTCCATTTGGTTTAACCTTTTC 60.018 38.462 15.68 0.00 39.58 2.29
1000 1005 1.632589 TGCTGTTCTGTAGGAGCTGA 58.367 50.000 0.00 0.00 32.41 4.26
1008 1013 2.826128 TCTGTAGGAGCTGATGAAACGT 59.174 45.455 0.00 0.00 0.00 3.99
1013 1018 1.667724 GGAGCTGATGAAACGTCCATG 59.332 52.381 7.95 0.00 0.00 3.66
1032 1037 1.067142 TGGTGGCTTGACACTATCGAC 60.067 52.381 6.56 0.00 41.09 4.20
1035 1040 1.269166 GGCTTGACACTATCGACACG 58.731 55.000 0.00 0.00 0.00 4.49
1074 1085 5.009410 AGGTACCTACTTCACCGATTATTCG 59.991 44.000 14.41 0.02 45.08 3.34
1305 1321 3.355378 TGCAGAGGTTGATATTGGGTTG 58.645 45.455 0.00 0.00 0.00 3.77
1319 1335 4.036804 GTTGTGCATTCGCCGGCA 62.037 61.111 28.98 8.41 37.32 5.69
1330 1346 2.248280 TCGCCGGCATATTGTTGTAT 57.752 45.000 28.98 0.00 0.00 2.29
1331 1347 1.870402 TCGCCGGCATATTGTTGTATG 59.130 47.619 28.98 4.86 35.61 2.39
1332 1348 1.069296 CGCCGGCATATTGTTGTATGG 60.069 52.381 28.98 0.00 33.61 2.74
1337 1353 3.017265 GCATATTGTTGTATGGCTGCC 57.983 47.619 12.87 12.87 33.61 4.85
1338 1354 2.624838 GCATATTGTTGTATGGCTGCCT 59.375 45.455 21.03 8.02 33.61 4.75
1339 1355 3.068590 GCATATTGTTGTATGGCTGCCTT 59.931 43.478 21.03 16.33 33.61 4.35
1340 1356 4.441913 GCATATTGTTGTATGGCTGCCTTT 60.442 41.667 21.03 9.99 33.61 3.11
1341 1357 5.663456 CATATTGTTGTATGGCTGCCTTTT 58.337 37.500 21.03 7.38 0.00 2.27
1342 1358 4.622260 ATTGTTGTATGGCTGCCTTTTT 57.378 36.364 21.03 4.82 0.00 1.94
1362 1378 4.513406 TTTTAGACAAACAGGGAGGTGT 57.487 40.909 0.00 0.00 0.00 4.16
1363 1379 5.633655 TTTTAGACAAACAGGGAGGTGTA 57.366 39.130 0.00 0.00 0.00 2.90
1364 1380 5.633655 TTTAGACAAACAGGGAGGTGTAA 57.366 39.130 0.00 0.00 0.00 2.41
1365 1381 5.633655 TTAGACAAACAGGGAGGTGTAAA 57.366 39.130 0.00 0.00 0.00 2.01
1366 1382 4.513406 AGACAAACAGGGAGGTGTAAAA 57.487 40.909 0.00 0.00 0.00 1.52
1367 1383 4.204799 AGACAAACAGGGAGGTGTAAAAC 58.795 43.478 0.00 0.00 0.00 2.43
1368 1384 4.079958 AGACAAACAGGGAGGTGTAAAACT 60.080 41.667 0.00 0.00 0.00 2.66
1369 1385 5.131475 AGACAAACAGGGAGGTGTAAAACTA 59.869 40.000 0.00 0.00 0.00 2.24
1370 1386 5.948842 ACAAACAGGGAGGTGTAAAACTAT 58.051 37.500 0.00 0.00 0.00 2.12
1371 1387 6.370453 ACAAACAGGGAGGTGTAAAACTATT 58.630 36.000 0.00 0.00 0.00 1.73
1372 1388 6.264518 ACAAACAGGGAGGTGTAAAACTATTG 59.735 38.462 0.00 0.00 0.00 1.90
1373 1389 4.332828 ACAGGGAGGTGTAAAACTATTGC 58.667 43.478 0.00 0.00 0.00 3.56
1374 1390 4.042934 ACAGGGAGGTGTAAAACTATTGCT 59.957 41.667 0.00 0.00 0.00 3.91
1375 1391 4.396166 CAGGGAGGTGTAAAACTATTGCTG 59.604 45.833 0.00 0.00 0.00 4.41
1376 1392 4.288626 AGGGAGGTGTAAAACTATTGCTGA 59.711 41.667 0.00 0.00 0.00 4.26
1377 1393 5.044846 AGGGAGGTGTAAAACTATTGCTGAT 60.045 40.000 0.00 0.00 0.00 2.90
1378 1394 6.157994 AGGGAGGTGTAAAACTATTGCTGATA 59.842 38.462 0.00 0.00 0.00 2.15
1379 1395 6.998673 GGGAGGTGTAAAACTATTGCTGATAT 59.001 38.462 0.00 0.00 0.00 1.63
1380 1396 7.041098 GGGAGGTGTAAAACTATTGCTGATATG 60.041 40.741 0.00 0.00 0.00 1.78
1381 1397 7.499232 GGAGGTGTAAAACTATTGCTGATATGT 59.501 37.037 0.00 0.00 0.00 2.29
1382 1398 8.213518 AGGTGTAAAACTATTGCTGATATGTG 57.786 34.615 0.00 0.00 0.00 3.21
1383 1399 7.283127 AGGTGTAAAACTATTGCTGATATGTGG 59.717 37.037 0.00 0.00 0.00 4.17
1384 1400 7.417612 GTGTAAAACTATTGCTGATATGTGGG 58.582 38.462 0.00 0.00 0.00 4.61
1385 1401 7.282224 GTGTAAAACTATTGCTGATATGTGGGA 59.718 37.037 0.00 0.00 0.00 4.37
1386 1402 7.998383 TGTAAAACTATTGCTGATATGTGGGAT 59.002 33.333 0.00 0.00 0.00 3.85
1387 1403 6.889301 AAACTATTGCTGATATGTGGGATG 57.111 37.500 0.00 0.00 0.00 3.51
1388 1404 4.914983 ACTATTGCTGATATGTGGGATGG 58.085 43.478 0.00 0.00 0.00 3.51
1389 1405 4.598807 ACTATTGCTGATATGTGGGATGGA 59.401 41.667 0.00 0.00 0.00 3.41
1390 1406 4.669866 ATTGCTGATATGTGGGATGGAT 57.330 40.909 0.00 0.00 0.00 3.41
1391 1407 3.708403 TGCTGATATGTGGGATGGATC 57.292 47.619 0.00 0.00 0.00 3.36
1392 1408 2.981081 TGCTGATATGTGGGATGGATCA 59.019 45.455 0.00 0.00 0.00 2.92
1393 1409 3.244665 TGCTGATATGTGGGATGGATCAC 60.245 47.826 0.00 0.00 34.71 3.06
1394 1410 3.244665 GCTGATATGTGGGATGGATCACA 60.245 47.826 0.00 0.00 46.15 3.58
1395 1411 4.747623 GCTGATATGTGGGATGGATCACAA 60.748 45.833 0.00 0.00 42.75 3.33
1396 1412 4.717877 TGATATGTGGGATGGATCACAAC 58.282 43.478 0.00 0.00 42.75 3.32
1397 1413 4.413189 TGATATGTGGGATGGATCACAACT 59.587 41.667 0.00 0.00 42.75 3.16
1398 1414 2.495155 TGTGGGATGGATCACAACTG 57.505 50.000 0.00 0.00 42.75 3.16
1399 1415 1.984424 TGTGGGATGGATCACAACTGA 59.016 47.619 0.00 0.00 42.75 3.41
1400 1416 2.374839 TGTGGGATGGATCACAACTGAA 59.625 45.455 0.00 0.00 42.75 3.02
1401 1417 3.012518 GTGGGATGGATCACAACTGAAG 58.987 50.000 0.00 0.00 42.75 3.02
1402 1418 2.019984 GGGATGGATCACAACTGAAGC 58.980 52.381 0.00 0.00 0.00 3.86
1403 1419 2.356535 GGGATGGATCACAACTGAAGCT 60.357 50.000 0.00 0.00 0.00 3.74
1404 1420 3.118261 GGGATGGATCACAACTGAAGCTA 60.118 47.826 0.00 0.00 0.00 3.32
1405 1421 4.517285 GGATGGATCACAACTGAAGCTAA 58.483 43.478 0.00 0.00 0.00 3.09
1406 1422 4.333926 GGATGGATCACAACTGAAGCTAAC 59.666 45.833 0.00 0.00 0.00 2.34
1407 1423 4.350368 TGGATCACAACTGAAGCTAACA 57.650 40.909 0.00 0.00 0.00 2.41
1408 1424 4.910195 TGGATCACAACTGAAGCTAACAT 58.090 39.130 0.00 0.00 0.00 2.71
1409 1425 5.316167 TGGATCACAACTGAAGCTAACATT 58.684 37.500 0.00 0.00 0.00 2.71
1410 1426 5.769662 TGGATCACAACTGAAGCTAACATTT 59.230 36.000 0.00 0.00 0.00 2.32
1411 1427 6.939730 TGGATCACAACTGAAGCTAACATTTA 59.060 34.615 0.00 0.00 0.00 1.40
1412 1428 7.119699 TGGATCACAACTGAAGCTAACATTTAG 59.880 37.037 0.00 0.00 0.00 1.85
1413 1429 6.801539 TCACAACTGAAGCTAACATTTAGG 57.198 37.500 0.00 0.00 0.00 2.69
1414 1430 6.530120 TCACAACTGAAGCTAACATTTAGGA 58.470 36.000 0.00 0.00 0.00 2.94
1415 1431 6.650807 TCACAACTGAAGCTAACATTTAGGAG 59.349 38.462 0.00 0.00 0.00 3.69
1416 1432 5.940470 ACAACTGAAGCTAACATTTAGGAGG 59.060 40.000 0.00 0.00 0.00 4.30
1417 1433 6.173339 CAACTGAAGCTAACATTTAGGAGGA 58.827 40.000 0.00 0.00 0.00 3.71
1418 1434 6.374417 ACTGAAGCTAACATTTAGGAGGAA 57.626 37.500 0.00 0.00 0.00 3.36
1419 1435 6.174049 ACTGAAGCTAACATTTAGGAGGAAC 58.826 40.000 0.00 0.00 0.00 3.62
1421 1437 6.779860 TGAAGCTAACATTTAGGAGGAACTT 58.220 36.000 0.00 0.00 41.55 2.66
1422 1438 7.231467 TGAAGCTAACATTTAGGAGGAACTTT 58.769 34.615 0.00 0.00 41.55 2.66
1423 1439 7.174946 TGAAGCTAACATTTAGGAGGAACTTTG 59.825 37.037 0.00 0.00 41.55 2.77
1424 1440 6.779860 AGCTAACATTTAGGAGGAACTTTGA 58.220 36.000 0.00 0.00 41.55 2.69
1425 1441 7.406104 AGCTAACATTTAGGAGGAACTTTGAT 58.594 34.615 0.00 0.00 41.55 2.57
1426 1442 7.337942 AGCTAACATTTAGGAGGAACTTTGATG 59.662 37.037 0.00 0.00 41.55 3.07
1427 1443 7.336931 GCTAACATTTAGGAGGAACTTTGATGA 59.663 37.037 0.00 0.00 41.55 2.92
1428 1444 9.401058 CTAACATTTAGGAGGAACTTTGATGAT 57.599 33.333 0.00 0.00 41.55 2.45
1429 1445 8.655935 AACATTTAGGAGGAACTTTGATGATT 57.344 30.769 0.00 0.00 41.55 2.57
1430 1446 8.059798 ACATTTAGGAGGAACTTTGATGATTG 57.940 34.615 0.00 0.00 41.55 2.67
1431 1447 7.123247 ACATTTAGGAGGAACTTTGATGATTGG 59.877 37.037 0.00 0.00 41.55 3.16
1432 1448 3.359950 AGGAGGAACTTTGATGATTGGC 58.640 45.455 0.00 0.00 41.55 4.52
1433 1449 3.011032 AGGAGGAACTTTGATGATTGGCT 59.989 43.478 0.00 0.00 41.55 4.75
1434 1450 3.379688 GGAGGAACTTTGATGATTGGCTC 59.620 47.826 0.00 0.00 41.55 4.70
1435 1451 4.012374 GAGGAACTTTGATGATTGGCTCA 58.988 43.478 0.00 0.00 41.55 4.26
1436 1452 4.607239 AGGAACTTTGATGATTGGCTCAT 58.393 39.130 0.00 0.00 41.92 2.90
1437 1453 4.401519 AGGAACTTTGATGATTGGCTCATG 59.598 41.667 0.00 0.00 39.72 3.07
1438 1454 4.441079 GGAACTTTGATGATTGGCTCATGG 60.441 45.833 0.00 0.00 44.83 3.66
1439 1455 3.972133 ACTTTGATGATTGGCTCATGGA 58.028 40.909 0.00 0.00 44.83 3.41
1440 1456 3.952323 ACTTTGATGATTGGCTCATGGAG 59.048 43.478 0.00 0.00 44.83 3.86
1449 1465 3.900855 CTCATGGAGCTGTGGTGC 58.099 61.111 0.00 0.00 0.00 5.01
1450 1466 1.748122 CTCATGGAGCTGTGGTGCC 60.748 63.158 0.00 0.00 0.00 5.01
1451 1467 2.034532 CATGGAGCTGTGGTGCCA 59.965 61.111 0.00 0.00 34.45 4.92
1452 1468 2.044555 CATGGAGCTGTGGTGCCAG 61.045 63.158 0.00 0.00 33.26 4.85
1458 1474 3.664495 CTGTGGTGCCAGCTGAAG 58.336 61.111 17.39 0.00 0.00 3.02
1459 1475 1.970114 CTGTGGTGCCAGCTGAAGG 60.970 63.158 17.39 0.00 0.00 3.46
1460 1476 2.401699 CTGTGGTGCCAGCTGAAGGA 62.402 60.000 17.39 0.00 0.00 3.36
1461 1477 1.673665 GTGGTGCCAGCTGAAGGAG 60.674 63.158 17.39 0.00 0.00 3.69
1462 1478 1.842920 TGGTGCCAGCTGAAGGAGA 60.843 57.895 17.39 0.00 0.00 3.71
1463 1479 1.203441 TGGTGCCAGCTGAAGGAGAT 61.203 55.000 17.39 0.00 0.00 2.75
1464 1480 0.034670 GGTGCCAGCTGAAGGAGATT 60.035 55.000 17.39 0.00 0.00 2.40
1465 1481 1.093159 GTGCCAGCTGAAGGAGATTG 58.907 55.000 17.39 0.00 0.00 2.67
1466 1482 0.679002 TGCCAGCTGAAGGAGATTGC 60.679 55.000 17.39 7.09 0.00 3.56
1467 1483 0.394080 GCCAGCTGAAGGAGATTGCT 60.394 55.000 17.39 0.00 0.00 3.91
1468 1484 1.134280 GCCAGCTGAAGGAGATTGCTA 60.134 52.381 17.39 0.00 32.29 3.49
1469 1485 2.836262 CCAGCTGAAGGAGATTGCTAG 58.164 52.381 17.39 0.00 32.29 3.42
1470 1486 2.211806 CAGCTGAAGGAGATTGCTAGC 58.788 52.381 8.42 8.10 32.29 3.42
1471 1487 1.836166 AGCTGAAGGAGATTGCTAGCA 59.164 47.619 14.93 14.93 31.71 3.49
1472 1488 2.158928 AGCTGAAGGAGATTGCTAGCAG 60.159 50.000 18.45 3.16 31.71 4.24
1473 1489 2.419851 GCTGAAGGAGATTGCTAGCAGT 60.420 50.000 18.45 15.86 0.00 4.40
1474 1490 3.196463 CTGAAGGAGATTGCTAGCAGTG 58.804 50.000 18.43 0.00 0.00 3.66
1475 1491 2.568956 TGAAGGAGATTGCTAGCAGTGT 59.431 45.455 18.43 14.04 0.00 3.55
1476 1492 3.008375 TGAAGGAGATTGCTAGCAGTGTT 59.992 43.478 18.43 5.50 0.00 3.32
1477 1493 4.222810 TGAAGGAGATTGCTAGCAGTGTTA 59.777 41.667 18.43 2.51 0.00 2.41
1478 1494 4.130286 AGGAGATTGCTAGCAGTGTTAC 57.870 45.455 18.43 10.63 0.00 2.50
1479 1495 3.515502 AGGAGATTGCTAGCAGTGTTACA 59.484 43.478 18.43 0.83 0.00 2.41
1480 1496 4.163078 AGGAGATTGCTAGCAGTGTTACAT 59.837 41.667 18.43 6.48 0.00 2.29
1481 1497 5.363868 AGGAGATTGCTAGCAGTGTTACATA 59.636 40.000 18.43 0.00 0.00 2.29
1482 1498 5.463724 GGAGATTGCTAGCAGTGTTACATAC 59.536 44.000 18.43 0.29 0.00 2.39
1483 1499 6.227298 AGATTGCTAGCAGTGTTACATACT 57.773 37.500 18.43 2.78 0.00 2.12
1484 1500 6.276847 AGATTGCTAGCAGTGTTACATACTC 58.723 40.000 18.43 0.00 0.00 2.59
1485 1501 5.661056 TTGCTAGCAGTGTTACATACTCT 57.339 39.130 18.45 0.00 0.00 3.24
1486 1502 4.998788 TGCTAGCAGTGTTACATACTCTG 58.001 43.478 14.93 0.00 46.31 3.35
1487 1503 4.705023 TGCTAGCAGTGTTACATACTCTGA 59.295 41.667 14.93 0.00 46.43 3.27
1488 1504 5.360999 TGCTAGCAGTGTTACATACTCTGAT 59.639 40.000 14.93 6.98 46.43 2.90
1489 1505 5.689514 GCTAGCAGTGTTACATACTCTGATG 59.310 44.000 10.63 0.00 46.43 3.07
1490 1506 5.016051 AGCAGTGTTACATACTCTGATGG 57.984 43.478 10.22 0.00 46.43 3.51
1491 1507 3.557595 GCAGTGTTACATACTCTGATGGC 59.442 47.826 10.22 0.00 46.43 4.40
1492 1508 4.758688 CAGTGTTACATACTCTGATGGCA 58.241 43.478 0.00 0.00 46.43 4.92
1493 1509 4.568359 CAGTGTTACATACTCTGATGGCAC 59.432 45.833 0.00 0.00 46.43 5.01
1494 1510 5.854397 CAGTGTTACATACTCTGATGGCACA 60.854 44.000 0.00 0.00 46.43 4.57
1495 1511 7.609737 CAGTGTTACATACTCTGATGGCACAG 61.610 46.154 9.81 9.81 46.43 3.66
1496 1512 9.660694 CAGTGTTACATACTCTGATGGCACAGA 62.661 44.444 15.61 15.61 46.43 3.41
1508 1524 3.057969 TGGCACAGACTCTTTGGTATG 57.942 47.619 0.00 0.00 34.95 2.39
1509 1525 2.290260 TGGCACAGACTCTTTGGTATGG 60.290 50.000 0.00 0.00 33.33 2.74
1510 1526 1.740025 GCACAGACTCTTTGGTATGGC 59.260 52.381 0.00 0.00 33.33 4.40
1511 1527 2.875672 GCACAGACTCTTTGGTATGGCA 60.876 50.000 0.00 0.00 33.33 4.92
1512 1528 3.005554 CACAGACTCTTTGGTATGGCAG 58.994 50.000 0.00 0.00 33.33 4.85
1513 1529 2.639839 ACAGACTCTTTGGTATGGCAGT 59.360 45.455 0.00 0.00 33.33 4.40
1514 1530 3.073062 ACAGACTCTTTGGTATGGCAGTT 59.927 43.478 0.00 0.00 33.33 3.16
1515 1531 3.438087 CAGACTCTTTGGTATGGCAGTTG 59.562 47.826 0.00 0.00 0.00 3.16
1516 1532 2.749621 GACTCTTTGGTATGGCAGTTGG 59.250 50.000 0.00 0.00 0.00 3.77
1517 1533 2.375174 ACTCTTTGGTATGGCAGTTGGA 59.625 45.455 0.00 0.00 0.00 3.53
1518 1534 3.012518 CTCTTTGGTATGGCAGTTGGAG 58.987 50.000 0.00 0.00 0.00 3.86
1519 1535 2.642311 TCTTTGGTATGGCAGTTGGAGA 59.358 45.455 0.00 0.00 0.00 3.71
1520 1536 2.787473 TTGGTATGGCAGTTGGAGAG 57.213 50.000 0.00 0.00 0.00 3.20
1521 1537 1.656587 TGGTATGGCAGTTGGAGAGT 58.343 50.000 0.00 0.00 0.00 3.24
1522 1538 2.827755 TGGTATGGCAGTTGGAGAGTA 58.172 47.619 0.00 0.00 0.00 2.59
1523 1539 3.178046 TGGTATGGCAGTTGGAGAGTAA 58.822 45.455 0.00 0.00 0.00 2.24
1524 1540 3.780294 TGGTATGGCAGTTGGAGAGTAAT 59.220 43.478 0.00 0.00 0.00 1.89
1542 1558 9.425577 GAGAGTAATGGTAATTATTCCACTAGC 57.574 37.037 0.00 0.00 36.25 3.42
1624 1643 3.767711 ACTCAAGGTCCCTCCAAAAATC 58.232 45.455 0.00 0.00 39.02 2.17
1633 1652 5.337571 GGTCCCTCCAAAAATCCATTTCTTC 60.338 44.000 0.00 0.00 35.97 2.87
1743 1762 5.151297 TGTGAGCATGAAACTGTCTATCA 57.849 39.130 0.00 0.00 0.00 2.15
1749 2791 6.054295 AGCATGAAACTGTCTATCATCCTTC 58.946 40.000 0.00 0.00 31.65 3.46
1755 2797 7.767659 TGAAACTGTCTATCATCCTTCTCAATG 59.232 37.037 0.00 0.00 0.00 2.82
1781 2823 3.018856 TGAATGCATCAGTGTTCATCCC 58.981 45.455 0.00 0.00 33.04 3.85
1801 2843 6.328641 TCCCGAGAGATTAATAGCTTACAC 57.671 41.667 0.00 0.00 0.00 2.90
1804 2846 6.587990 CCCGAGAGATTAATAGCTTACACATG 59.412 42.308 0.00 0.00 0.00 3.21
1807 2849 9.335891 CGAGAGATTAATAGCTTACACATGTAG 57.664 37.037 0.00 0.00 0.00 2.74
1829 2871 5.721232 AGTTCAATTACTAGTCGGGTTCTG 58.279 41.667 0.00 0.00 0.00 3.02
1873 2915 6.648192 CACTCATCTTGTATCCTCCTCTTTT 58.352 40.000 0.00 0.00 0.00 2.27
1878 2920 5.978814 TCTTGTATCCTCCTCTTTTGCTAC 58.021 41.667 0.00 0.00 0.00 3.58
1880 2922 6.213600 TCTTGTATCCTCCTCTTTTGCTACTT 59.786 38.462 0.00 0.00 0.00 2.24
1881 2923 7.399191 TCTTGTATCCTCCTCTTTTGCTACTTA 59.601 37.037 0.00 0.00 0.00 2.24
2024 3067 8.144478 TGCTGAACTGAAGAATATGATACTACC 58.856 37.037 0.00 0.00 0.00 3.18
2043 3086 7.990541 ACTACCGTTTTTGTTTACAATTTCC 57.009 32.000 0.00 0.00 35.55 3.13
2078 3121 3.442273 TGAAGTTCAGCAAGTTTCGGTTT 59.558 39.130 0.08 0.00 0.00 3.27
2084 3127 5.103290 TCAGCAAGTTTCGGTTTGTATTC 57.897 39.130 0.00 0.00 0.00 1.75
2150 3193 5.593010 ACAGTGTACTGAACTTCTGTCTTC 58.407 41.667 18.18 0.07 46.59 2.87
2193 3236 3.689649 GGAACTTTACATGCGTGAAGGAT 59.310 43.478 14.17 0.62 41.75 3.24
2194 3237 4.873827 GGAACTTTACATGCGTGAAGGATA 59.126 41.667 14.17 0.00 41.75 2.59
2195 3238 5.006746 GGAACTTTACATGCGTGAAGGATAG 59.993 44.000 14.17 3.67 41.75 2.08
2224 3270 1.905637 TCGTCTGACAAGCTCCTACA 58.094 50.000 8.73 0.00 0.00 2.74
2317 3369 5.794687 TTGAACAACTCATATTGTAGGCG 57.205 39.130 0.00 0.00 42.01 5.52
2318 3370 4.827692 TGAACAACTCATATTGTAGGCGT 58.172 39.130 0.00 0.00 42.01 5.68
2319 3371 5.968254 TGAACAACTCATATTGTAGGCGTA 58.032 37.500 0.00 0.00 42.01 4.42
2320 3372 6.578944 TGAACAACTCATATTGTAGGCGTAT 58.421 36.000 0.00 0.00 42.01 3.06
2321 3373 7.718525 TGAACAACTCATATTGTAGGCGTATA 58.281 34.615 0.00 0.00 42.01 1.47
2322 3374 8.364894 TGAACAACTCATATTGTAGGCGTATAT 58.635 33.333 0.00 0.00 42.01 0.86
2323 3375 9.850628 GAACAACTCATATTGTAGGCGTATATA 57.149 33.333 0.00 0.00 42.01 0.86
2324 3376 9.856488 AACAACTCATATTGTAGGCGTATATAG 57.144 33.333 0.00 0.00 42.01 1.31
2325 3377 9.239551 ACAACTCATATTGTAGGCGTATATAGA 57.760 33.333 0.00 0.00 41.04 1.98
2326 3378 9.504710 CAACTCATATTGTAGGCGTATATAGAC 57.495 37.037 0.00 0.00 0.00 2.59
2327 3379 9.463902 AACTCATATTGTAGGCGTATATAGACT 57.536 33.333 0.00 0.00 0.00 3.24
2328 3380 8.894731 ACTCATATTGTAGGCGTATATAGACTG 58.105 37.037 0.00 0.00 0.00 3.51
2329 3381 9.110502 CTCATATTGTAGGCGTATATAGACTGA 57.889 37.037 0.00 0.00 0.00 3.41
2330 3382 9.457436 TCATATTGTAGGCGTATATAGACTGAA 57.543 33.333 0.00 0.00 0.00 3.02
2331 3383 9.504710 CATATTGTAGGCGTATATAGACTGAAC 57.495 37.037 0.00 0.00 0.00 3.18
2332 3384 6.947644 TTGTAGGCGTATATAGACTGAACA 57.052 37.500 0.00 0.00 0.00 3.18
2333 3385 7.520451 TTGTAGGCGTATATAGACTGAACAT 57.480 36.000 0.00 0.00 0.00 2.71
2334 3386 7.520451 TGTAGGCGTATATAGACTGAACATT 57.480 36.000 0.00 0.00 0.00 2.71
2335 3387 7.591165 TGTAGGCGTATATAGACTGAACATTC 58.409 38.462 0.00 0.00 0.00 2.67
2336 3388 6.902771 AGGCGTATATAGACTGAACATTCT 57.097 37.500 0.00 0.00 0.00 2.40
2337 3389 6.915349 AGGCGTATATAGACTGAACATTCTC 58.085 40.000 0.00 0.00 0.00 2.87
2338 3390 6.490381 AGGCGTATATAGACTGAACATTCTCA 59.510 38.462 0.00 0.00 0.00 3.27
2339 3391 6.804295 GGCGTATATAGACTGAACATTCTCAG 59.196 42.308 0.00 0.00 46.94 3.35
2340 3392 6.804295 GCGTATATAGACTGAACATTCTCAGG 59.196 42.308 5.65 0.00 46.02 3.86
2341 3393 7.308649 GCGTATATAGACTGAACATTCTCAGGA 60.309 40.741 5.65 0.00 46.02 3.86
2342 3394 8.233868 CGTATATAGACTGAACATTCTCAGGAG 58.766 40.741 5.65 0.00 46.02 3.69
2343 3395 5.867903 ATAGACTGAACATTCTCAGGAGG 57.132 43.478 5.65 0.00 46.02 4.30
2344 3396 3.515562 AGACTGAACATTCTCAGGAGGT 58.484 45.455 5.65 0.00 46.02 3.85
2345 3397 3.260380 AGACTGAACATTCTCAGGAGGTG 59.740 47.826 5.65 0.00 46.02 4.00
2346 3398 2.304180 ACTGAACATTCTCAGGAGGTGG 59.696 50.000 5.65 0.00 46.02 4.61
2347 3399 1.630369 TGAACATTCTCAGGAGGTGGG 59.370 52.381 0.00 0.00 0.00 4.61
2348 3400 1.909302 GAACATTCTCAGGAGGTGGGA 59.091 52.381 0.00 0.00 31.81 4.37
2352 3404 1.645710 TTCTCAGGAGGTGGGAAGAC 58.354 55.000 0.00 0.00 41.05 3.01
2353 3405 0.487325 TCTCAGGAGGTGGGAAGACA 59.513 55.000 0.00 0.00 30.13 3.41
2354 3406 1.132849 TCTCAGGAGGTGGGAAGACAA 60.133 52.381 0.00 0.00 30.13 3.18
2355 3407 1.699634 CTCAGGAGGTGGGAAGACAAA 59.300 52.381 0.00 0.00 0.00 2.83
2356 3408 1.699634 TCAGGAGGTGGGAAGACAAAG 59.300 52.381 0.00 0.00 0.00 2.77
2357 3409 1.699634 CAGGAGGTGGGAAGACAAAGA 59.300 52.381 0.00 0.00 0.00 2.52
2358 3410 1.981495 AGGAGGTGGGAAGACAAAGAG 59.019 52.381 0.00 0.00 0.00 2.85
2359 3411 1.003696 GGAGGTGGGAAGACAAAGAGG 59.996 57.143 0.00 0.00 0.00 3.69
2360 3412 1.978580 GAGGTGGGAAGACAAAGAGGA 59.021 52.381 0.00 0.00 0.00 3.71
2361 3413 1.981495 AGGTGGGAAGACAAAGAGGAG 59.019 52.381 0.00 0.00 0.00 3.69
2362 3414 1.700186 GGTGGGAAGACAAAGAGGAGT 59.300 52.381 0.00 0.00 0.00 3.85
2363 3415 2.904434 GGTGGGAAGACAAAGAGGAGTA 59.096 50.000 0.00 0.00 0.00 2.59
2364 3416 3.306849 GGTGGGAAGACAAAGAGGAGTAC 60.307 52.174 0.00 0.00 0.00 2.73
2365 3417 2.904434 TGGGAAGACAAAGAGGAGTACC 59.096 50.000 0.00 0.00 0.00 3.34
2366 3418 2.094130 GGGAAGACAAAGAGGAGTACCG 60.094 54.545 0.00 0.00 41.83 4.02
2367 3419 2.824341 GGAAGACAAAGAGGAGTACCGA 59.176 50.000 0.00 0.00 41.83 4.69
2368 3420 3.367190 GGAAGACAAAGAGGAGTACCGAC 60.367 52.174 0.00 0.00 41.83 4.79
2369 3421 1.811359 AGACAAAGAGGAGTACCGACG 59.189 52.381 0.00 0.00 41.83 5.12
2370 3422 0.886563 ACAAAGAGGAGTACCGACGG 59.113 55.000 13.61 13.61 41.83 4.79
2371 3423 0.172803 CAAAGAGGAGTACCGACGGG 59.827 60.000 20.00 0.00 41.83 5.28
2402 3454 3.912907 GGACGACGATGGCCCGAT 61.913 66.667 8.49 0.00 0.00 4.18
2403 3455 2.658593 GACGACGATGGCCCGATG 60.659 66.667 8.49 2.74 0.00 3.84
2404 3456 4.891727 ACGACGATGGCCCGATGC 62.892 66.667 8.49 0.00 40.16 3.91
2433 3485 4.754667 GGACGGGGAGGACGCAAC 62.755 72.222 0.00 0.00 34.00 4.17
2439 3491 3.723348 GGAGGACGCAACGGCAAC 61.723 66.667 0.00 0.00 41.24 4.17
2465 3517 2.882876 CGGCGAACGTATTAAATTCCG 58.117 47.619 0.00 0.00 37.93 4.30
2466 3518 2.632228 GGCGAACGTATTAAATTCCGC 58.368 47.619 0.00 0.00 0.00 5.54
2467 3519 2.283661 GCGAACGTATTAAATTCCGCG 58.716 47.619 0.00 0.00 0.00 6.46
2468 3520 2.283661 CGAACGTATTAAATTCCGCGC 58.716 47.619 0.00 0.00 0.00 6.86
2469 3521 2.632228 GAACGTATTAAATTCCGCGCC 58.368 47.619 0.00 0.00 0.00 6.53
2470 3522 0.578211 ACGTATTAAATTCCGCGCCG 59.422 50.000 0.00 0.00 0.00 6.46
2471 3523 0.578211 CGTATTAAATTCCGCGCCGT 59.422 50.000 0.00 0.00 0.00 5.68
2472 3524 1.655325 CGTATTAAATTCCGCGCCGTG 60.655 52.381 0.00 0.00 0.00 4.94
2473 3525 1.593933 GTATTAAATTCCGCGCCGTGA 59.406 47.619 0.00 0.00 0.00 4.35
2474 3526 1.305201 ATTAAATTCCGCGCCGTGAT 58.695 45.000 0.00 0.00 0.00 3.06
2475 3527 1.937278 TTAAATTCCGCGCCGTGATA 58.063 45.000 0.00 0.00 0.00 2.15
2476 3528 1.493772 TAAATTCCGCGCCGTGATAG 58.506 50.000 0.00 0.00 0.00 2.08
2477 3529 1.157870 AAATTCCGCGCCGTGATAGG 61.158 55.000 0.00 0.00 0.00 2.57
2478 3530 2.023414 AATTCCGCGCCGTGATAGGA 62.023 55.000 0.00 0.00 0.00 2.94
2479 3531 2.421877 ATTCCGCGCCGTGATAGGAG 62.422 60.000 0.00 0.00 32.03 3.69
2480 3532 3.592814 CCGCGCCGTGATAGGAGA 61.593 66.667 0.00 0.00 32.51 3.71
2481 3533 2.353607 CGCGCCGTGATAGGAGAC 60.354 66.667 0.00 0.00 32.51 3.36
2482 3534 2.353607 GCGCCGTGATAGGAGACG 60.354 66.667 0.00 0.00 32.51 4.18
2483 3535 2.831366 GCGCCGTGATAGGAGACGA 61.831 63.158 0.00 0.00 37.81 4.20
2484 3536 1.280142 CGCCGTGATAGGAGACGAG 59.720 63.158 0.00 0.00 37.81 4.18
2485 3537 1.158484 CGCCGTGATAGGAGACGAGA 61.158 60.000 0.00 0.00 37.81 4.04
2486 3538 0.308376 GCCGTGATAGGAGACGAGAC 59.692 60.000 0.00 0.00 37.81 3.36
2487 3539 0.582482 CCGTGATAGGAGACGAGACG 59.418 60.000 0.00 0.00 37.81 4.18
2488 3540 1.568606 CGTGATAGGAGACGAGACGA 58.431 55.000 0.00 0.00 37.81 4.20
2489 3541 1.523515 CGTGATAGGAGACGAGACGAG 59.476 57.143 0.00 0.00 37.81 4.18
2490 3542 2.798853 CGTGATAGGAGACGAGACGAGA 60.799 54.545 0.00 0.00 37.81 4.04
2491 3543 2.540931 GTGATAGGAGACGAGACGAGAC 59.459 54.545 0.00 0.00 0.00 3.36
2492 3544 1.788308 GATAGGAGACGAGACGAGACG 59.212 57.143 0.00 0.00 0.00 4.18
2493 3545 0.813821 TAGGAGACGAGACGAGACGA 59.186 55.000 0.00 0.00 0.00 4.20
2494 3546 0.458889 AGGAGACGAGACGAGACGAG 60.459 60.000 0.00 0.00 0.00 4.18
2495 3547 0.458197 GGAGACGAGACGAGACGAGA 60.458 60.000 0.00 0.00 0.00 4.04
2496 3548 0.641783 GAGACGAGACGAGACGAGAC 59.358 60.000 0.00 0.00 0.00 3.36
2497 3549 1.072116 AGACGAGACGAGACGAGACG 61.072 60.000 0.00 0.00 0.00 4.18
2498 3550 2.011856 GACGAGACGAGACGAGACGG 62.012 65.000 0.00 0.00 0.00 4.79
2499 3551 2.800581 CGAGACGAGACGAGACGGG 61.801 68.421 0.00 0.00 0.00 5.28
2500 3552 1.447489 GAGACGAGACGAGACGGGA 60.447 63.158 0.00 0.00 0.00 5.14
2501 3553 1.422950 GAGACGAGACGAGACGGGAG 61.423 65.000 0.00 0.00 0.00 4.30
2513 3565 1.673477 ACGGGAGTACGGGTTTTCC 59.327 57.895 0.00 0.00 44.60 3.13
2523 3575 3.656457 GGGTTTTCCGTGGTACCAT 57.344 52.632 19.72 0.00 41.82 3.55
2524 3576 1.456296 GGGTTTTCCGTGGTACCATC 58.544 55.000 19.72 10.92 41.82 3.51
2525 3577 1.271488 GGGTTTTCCGTGGTACCATCA 60.271 52.381 19.72 1.73 41.82 3.07
2526 3578 2.619590 GGGTTTTCCGTGGTACCATCAT 60.620 50.000 19.72 0.00 41.82 2.45
2527 3579 2.681344 GGTTTTCCGTGGTACCATCATC 59.319 50.000 19.72 3.78 0.00 2.92
2528 3580 2.681344 GTTTTCCGTGGTACCATCATCC 59.319 50.000 19.72 3.36 0.00 3.51
2529 3581 0.834612 TTCCGTGGTACCATCATCCC 59.165 55.000 19.72 2.55 0.00 3.85
2530 3582 1.052124 TCCGTGGTACCATCATCCCC 61.052 60.000 19.72 1.74 0.00 4.81
2531 3583 1.054406 CCGTGGTACCATCATCCCCT 61.054 60.000 19.72 0.00 0.00 4.79
2532 3584 0.106708 CGTGGTACCATCATCCCCTG 59.893 60.000 19.72 0.00 0.00 4.45
2533 3585 1.213296 GTGGTACCATCATCCCCTGT 58.787 55.000 19.72 0.00 0.00 4.00
2534 3586 1.134098 GTGGTACCATCATCCCCTGTG 60.134 57.143 19.72 0.00 0.00 3.66
2535 3587 0.179018 GGTACCATCATCCCCTGTGC 60.179 60.000 7.15 0.00 0.00 4.57
2536 3588 0.839946 GTACCATCATCCCCTGTGCT 59.160 55.000 0.00 0.00 0.00 4.40
2537 3589 0.839277 TACCATCATCCCCTGTGCTG 59.161 55.000 0.00 0.00 0.00 4.41
2538 3590 1.210204 ACCATCATCCCCTGTGCTGT 61.210 55.000 0.00 0.00 0.00 4.40
2539 3591 0.750546 CCATCATCCCCTGTGCTGTG 60.751 60.000 0.00 0.00 0.00 3.66
2540 3592 1.077212 ATCATCCCCTGTGCTGTGC 60.077 57.895 0.00 0.00 0.00 4.57
2541 3593 1.569030 ATCATCCCCTGTGCTGTGCT 61.569 55.000 0.00 0.00 0.00 4.40
2542 3594 2.044555 CATCCCCTGTGCTGTGCTG 61.045 63.158 0.00 0.00 0.00 4.41
2543 3595 3.278072 ATCCCCTGTGCTGTGCTGG 62.278 63.158 0.00 0.00 0.00 4.85
2546 3598 4.655647 CCTGTGCTGTGCTGGGCT 62.656 66.667 0.00 0.00 0.00 5.19
2547 3599 3.362797 CTGTGCTGTGCTGGGCTG 61.363 66.667 0.00 0.00 0.00 4.85
2551 3603 4.719106 GCTGTGCTGGGCTGCTCT 62.719 66.667 0.00 0.00 0.00 4.09
2552 3604 2.033757 CTGTGCTGGGCTGCTCTT 59.966 61.111 0.00 0.00 0.00 2.85
2553 3605 2.281970 TGTGCTGGGCTGCTCTTG 60.282 61.111 0.00 0.00 0.00 3.02
2554 3606 3.745803 GTGCTGGGCTGCTCTTGC 61.746 66.667 0.00 6.10 40.20 4.01
2593 3645 3.072468 CCCCGTCCCGAGCAGTAA 61.072 66.667 0.00 0.00 0.00 2.24
2594 3646 2.652095 CCCCGTCCCGAGCAGTAAA 61.652 63.158 0.00 0.00 0.00 2.01
2595 3647 1.153628 CCCGTCCCGAGCAGTAAAG 60.154 63.158 0.00 0.00 0.00 1.85
2596 3648 1.590147 CCGTCCCGAGCAGTAAAGT 59.410 57.895 0.00 0.00 0.00 2.66
2597 3649 0.813184 CCGTCCCGAGCAGTAAAGTA 59.187 55.000 0.00 0.00 0.00 2.24
2598 3650 1.202268 CCGTCCCGAGCAGTAAAGTAG 60.202 57.143 0.00 0.00 0.00 2.57
2599 3651 1.471684 CGTCCCGAGCAGTAAAGTAGT 59.528 52.381 0.00 0.00 0.00 2.73
2600 3652 2.679837 CGTCCCGAGCAGTAAAGTAGTA 59.320 50.000 0.00 0.00 0.00 1.82
2601 3653 3.242673 CGTCCCGAGCAGTAAAGTAGTAG 60.243 52.174 0.00 0.00 0.00 2.57
2602 3654 3.693578 GTCCCGAGCAGTAAAGTAGTAGT 59.306 47.826 0.00 0.00 0.00 2.73
2603 3655 4.878397 GTCCCGAGCAGTAAAGTAGTAGTA 59.122 45.833 0.00 0.00 0.00 1.82
2604 3656 4.878397 TCCCGAGCAGTAAAGTAGTAGTAC 59.122 45.833 0.00 0.00 0.00 2.73
2605 3657 4.260538 CCCGAGCAGTAAAGTAGTAGTACG 60.261 50.000 2.04 0.00 33.97 3.67
2606 3658 4.331168 CCGAGCAGTAAAGTAGTAGTACGT 59.669 45.833 2.04 0.00 33.97 3.57
2607 3659 5.488458 CGAGCAGTAAAGTAGTAGTACGTC 58.512 45.833 0.00 0.00 33.97 4.34
2608 3660 5.462034 AGCAGTAAAGTAGTAGTACGTCG 57.538 43.478 0.00 0.00 33.97 5.12
2609 3661 4.331168 AGCAGTAAAGTAGTAGTACGTCGG 59.669 45.833 0.00 0.00 33.97 4.79
2610 3662 4.093556 GCAGTAAAGTAGTAGTACGTCGGT 59.906 45.833 0.00 0.00 33.97 4.69
2611 3663 5.725316 GCAGTAAAGTAGTAGTACGTCGGTC 60.725 48.000 0.00 0.00 33.97 4.79
2612 3664 5.578727 CAGTAAAGTAGTAGTACGTCGGTCT 59.421 44.000 0.00 0.00 33.97 3.85
2613 3665 4.935885 AAAGTAGTAGTACGTCGGTCTG 57.064 45.455 0.00 0.00 33.97 3.51
2614 3666 2.275318 AGTAGTAGTACGTCGGTCTGC 58.725 52.381 0.00 0.00 33.97 4.26
2615 3667 2.093764 AGTAGTAGTACGTCGGTCTGCT 60.094 50.000 12.17 12.17 33.97 4.24
2616 3668 1.367659 AGTAGTACGTCGGTCTGCTC 58.632 55.000 0.00 0.00 0.00 4.26
2617 3669 0.026027 GTAGTACGTCGGTCTGCTCG 59.974 60.000 0.00 0.00 0.00 5.03
2618 3670 1.699656 TAGTACGTCGGTCTGCTCGC 61.700 60.000 0.00 0.00 0.00 5.03
2619 3671 3.807538 TACGTCGGTCTGCTCGCC 61.808 66.667 0.00 0.00 0.00 5.54
2635 3687 3.276091 CCGCACCGCTCACAACAA 61.276 61.111 0.00 0.00 0.00 2.83
2636 3688 2.712539 CGCACCGCTCACAACAAA 59.287 55.556 0.00 0.00 0.00 2.83
2637 3689 1.654137 CGCACCGCTCACAACAAAC 60.654 57.895 0.00 0.00 0.00 2.93
2638 3690 1.431440 GCACCGCTCACAACAAACA 59.569 52.632 0.00 0.00 0.00 2.83
2639 3691 0.865639 GCACCGCTCACAACAAACAC 60.866 55.000 0.00 0.00 0.00 3.32
2640 3692 0.588730 CACCGCTCACAACAAACACG 60.589 55.000 0.00 0.00 0.00 4.49
2641 3693 1.654137 CCGCTCACAACAAACACGC 60.654 57.895 0.00 0.00 0.00 5.34
2642 3694 1.061729 CGCTCACAACAAACACGCA 59.938 52.632 0.00 0.00 0.00 5.24
2643 3695 1.193665 CGCTCACAACAAACACGCAC 61.194 55.000 0.00 0.00 0.00 5.34
2644 3696 0.865639 GCTCACAACAAACACGCACC 60.866 55.000 0.00 0.00 0.00 5.01
2645 3697 0.732571 CTCACAACAAACACGCACCT 59.267 50.000 0.00 0.00 0.00 4.00
2646 3698 0.730265 TCACAACAAACACGCACCTC 59.270 50.000 0.00 0.00 0.00 3.85
2647 3699 0.588730 CACAACAAACACGCACCTCG 60.589 55.000 0.00 0.00 45.38 4.63
2648 3700 0.741574 ACAACAAACACGCACCTCGA 60.742 50.000 0.00 0.00 41.67 4.04
2649 3701 0.042188 CAACAAACACGCACCTCGAG 60.042 55.000 5.13 5.13 41.67 4.04
2650 3702 1.157870 AACAAACACGCACCTCGAGG 61.158 55.000 30.11 30.11 41.67 4.63
2651 3703 2.665185 AAACACGCACCTCGAGGC 60.665 61.111 31.56 17.15 41.67 4.70
2652 3704 3.454587 AAACACGCACCTCGAGGCA 62.455 57.895 31.56 0.00 41.67 4.75
2653 3705 3.865929 AACACGCACCTCGAGGCAG 62.866 63.158 31.56 23.94 41.67 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 8.668353 TGAAGATAGTCAATAATTCACTTGTGC 58.332 33.333 0.00 0.00 0.00 4.57
18 19 4.039730 ACCATGTCCCGAATCTGAAGATAG 59.960 45.833 0.00 0.00 33.73 2.08
31 32 3.141398 CCAGATTATCAACCATGTCCCG 58.859 50.000 0.00 0.00 0.00 5.14
82 83 2.280524 CCGAGTGAAACGCCACCA 60.281 61.111 0.00 0.00 45.86 4.17
271 274 0.706433 ACAAGCAACTGGATGGGGAT 59.294 50.000 0.00 0.00 0.00 3.85
276 279 0.038744 AGGGGACAAGCAACTGGATG 59.961 55.000 0.00 0.00 0.00 3.51
415 418 0.603707 CCAAGCAGAGAACCGAGCAA 60.604 55.000 0.00 0.00 0.00 3.91
444 447 5.594317 GCACATTTGGAACCCTACTGATAAT 59.406 40.000 0.00 0.00 0.00 1.28
445 448 4.947388 GCACATTTGGAACCCTACTGATAA 59.053 41.667 0.00 0.00 0.00 1.75
464 467 0.978907 TGATGCCTTCTCTCAGCACA 59.021 50.000 0.00 0.00 39.77 4.57
480 483 8.506083 AGGTATTAAAATGATCAGGGAGTTGAT 58.494 33.333 0.09 0.00 40.40 2.57
635 640 0.909610 TCCAGGGAGAGCGACCAAAT 60.910 55.000 0.00 0.00 0.00 2.32
675 680 0.600782 TTAAACGACCACGACCAGGC 60.601 55.000 0.00 0.00 42.66 4.85
687 692 5.179742 ACGCCACAATATGAACTTTAAACGA 59.820 36.000 0.00 0.00 0.00 3.85
696 701 3.896122 ACAAACACGCCACAATATGAAC 58.104 40.909 0.00 0.00 0.00 3.18
703 708 1.134340 AGGACTACAAACACGCCACAA 60.134 47.619 0.00 0.00 0.00 3.33
704 709 0.466543 AGGACTACAAACACGCCACA 59.533 50.000 0.00 0.00 0.00 4.17
745 750 6.779860 AGGCCAAAGAGACTACTCATAAAAA 58.220 36.000 5.01 0.00 44.79 1.94
808 813 1.733912 GAACAACGCATGAGAGATGCA 59.266 47.619 2.50 0.00 44.75 3.96
812 817 4.783764 TTCTAGAACAACGCATGAGAGA 57.216 40.909 2.50 0.00 0.00 3.10
851 856 4.152938 TCATCAAGTGCTTTCATTCAGTCG 59.847 41.667 0.00 0.00 0.00 4.18
884 889 4.895297 ACAAACCATGATGAAAGTGACCTT 59.105 37.500 0.00 0.00 0.00 3.50
886 891 4.853924 ACAAACCATGATGAAAGTGACC 57.146 40.909 0.00 0.00 0.00 4.02
902 907 2.844122 AGCCGTGAAAGTGAACAAAC 57.156 45.000 0.00 0.00 0.00 2.93
918 923 1.669265 GGAAGCACACGGTAAATAGCC 59.331 52.381 0.00 0.00 0.00 3.93
956 961 3.356529 ACAAAGGATCTGCACCTAAGG 57.643 47.619 0.00 0.00 36.67 2.69
1000 1005 0.038166 AGCCACCATGGACGTTTCAT 59.962 50.000 21.47 0.00 40.96 2.57
1008 1013 1.357137 TAGTGTCAAGCCACCATGGA 58.643 50.000 21.47 0.00 40.96 3.41
1013 1018 1.067142 TGTCGATAGTGTCAAGCCACC 60.067 52.381 0.00 0.00 35.93 4.61
1048 1053 7.521871 AATAATCGGTGAAGTAGGTACCTAG 57.478 40.000 22.37 8.69 32.28 3.02
1074 1085 5.674933 AGTAGTAACTGCAAAGTGAAAGC 57.325 39.130 0.00 0.00 33.57 3.51
1101 1112 8.307582 TGGTTCTAAACAACCTTTGGAATAAA 57.692 30.769 4.10 0.00 45.54 1.40
1104 1115 6.800072 TTGGTTCTAAACAACCTTTGGAAT 57.200 33.333 4.10 0.00 45.54 3.01
1105 1116 6.407525 CCATTGGTTCTAAACAACCTTTGGAA 60.408 38.462 14.24 0.00 45.54 3.53
1106 1117 5.069781 CCATTGGTTCTAAACAACCTTTGGA 59.930 40.000 14.24 0.00 45.54 3.53
1107 1118 5.069781 TCCATTGGTTCTAAACAACCTTTGG 59.930 40.000 1.86 13.65 45.54 3.28
1108 1119 6.155475 TCCATTGGTTCTAAACAACCTTTG 57.845 37.500 1.86 2.15 45.54 2.77
1109 1120 6.994421 ATCCATTGGTTCTAAACAACCTTT 57.006 33.333 1.86 0.00 45.54 3.11
1145 1156 5.840693 TCCCTTTGATCAGTCATATAGAGCA 59.159 40.000 0.00 0.00 33.56 4.26
1156 1167 3.593442 TTTGGTGTCCCTTTGATCAGT 57.407 42.857 0.00 0.00 0.00 3.41
1229 1241 7.962995 AATTACTGTCTCTCTACATCCTTCA 57.037 36.000 0.00 0.00 0.00 3.02
1230 1242 9.660180 AAAAATTACTGTCTCTCTACATCCTTC 57.340 33.333 0.00 0.00 0.00 3.46
1236 1248 9.832445 AAAGTGAAAAATTACTGTCTCTCTACA 57.168 29.630 0.00 0.00 0.00 2.74
1283 1299 3.737559 ACCCAATATCAACCTCTGCAA 57.262 42.857 0.00 0.00 0.00 4.08
1305 1321 0.661187 CAATATGCCGGCGAATGCAC 60.661 55.000 23.90 0.00 45.35 4.57
1319 1335 5.937975 AAAAGGCAGCCATACAACAATAT 57.062 34.783 15.80 0.00 0.00 1.28
1340 1356 4.862371 ACACCTCCCTGTTTGTCTAAAAA 58.138 39.130 0.00 0.00 0.00 1.94
1341 1357 4.513406 ACACCTCCCTGTTTGTCTAAAA 57.487 40.909 0.00 0.00 0.00 1.52
1342 1358 5.633655 TTACACCTCCCTGTTTGTCTAAA 57.366 39.130 0.00 0.00 0.00 1.85
1343 1359 5.633655 TTTACACCTCCCTGTTTGTCTAA 57.366 39.130 0.00 0.00 0.00 2.10
1344 1360 5.131475 AGTTTTACACCTCCCTGTTTGTCTA 59.869 40.000 0.00 0.00 0.00 2.59
1345 1361 4.079958 AGTTTTACACCTCCCTGTTTGTCT 60.080 41.667 0.00 0.00 0.00 3.41
1346 1362 4.204799 AGTTTTACACCTCCCTGTTTGTC 58.795 43.478 0.00 0.00 0.00 3.18
1347 1363 4.245251 AGTTTTACACCTCCCTGTTTGT 57.755 40.909 0.00 0.00 0.00 2.83
1348 1364 6.677913 CAATAGTTTTACACCTCCCTGTTTG 58.322 40.000 0.00 0.00 0.00 2.93
1349 1365 5.243060 GCAATAGTTTTACACCTCCCTGTTT 59.757 40.000 0.00 0.00 0.00 2.83
1350 1366 4.765339 GCAATAGTTTTACACCTCCCTGTT 59.235 41.667 0.00 0.00 0.00 3.16
1351 1367 4.042934 AGCAATAGTTTTACACCTCCCTGT 59.957 41.667 0.00 0.00 0.00 4.00
1352 1368 4.396166 CAGCAATAGTTTTACACCTCCCTG 59.604 45.833 0.00 0.00 0.00 4.45
1353 1369 4.288626 TCAGCAATAGTTTTACACCTCCCT 59.711 41.667 0.00 0.00 0.00 4.20
1354 1370 4.585879 TCAGCAATAGTTTTACACCTCCC 58.414 43.478 0.00 0.00 0.00 4.30
1355 1371 7.499232 ACATATCAGCAATAGTTTTACACCTCC 59.501 37.037 0.00 0.00 0.00 4.30
1356 1372 8.338259 CACATATCAGCAATAGTTTTACACCTC 58.662 37.037 0.00 0.00 0.00 3.85
1357 1373 7.283127 CCACATATCAGCAATAGTTTTACACCT 59.717 37.037 0.00 0.00 0.00 4.00
1358 1374 7.417612 CCACATATCAGCAATAGTTTTACACC 58.582 38.462 0.00 0.00 0.00 4.16
1359 1375 7.282224 TCCCACATATCAGCAATAGTTTTACAC 59.718 37.037 0.00 0.00 0.00 2.90
1360 1376 7.342581 TCCCACATATCAGCAATAGTTTTACA 58.657 34.615 0.00 0.00 0.00 2.41
1361 1377 7.801716 TCCCACATATCAGCAATAGTTTTAC 57.198 36.000 0.00 0.00 0.00 2.01
1362 1378 7.448161 CCATCCCACATATCAGCAATAGTTTTA 59.552 37.037 0.00 0.00 0.00 1.52
1363 1379 6.266103 CCATCCCACATATCAGCAATAGTTTT 59.734 38.462 0.00 0.00 0.00 2.43
1364 1380 5.771666 CCATCCCACATATCAGCAATAGTTT 59.228 40.000 0.00 0.00 0.00 2.66
1365 1381 5.073554 TCCATCCCACATATCAGCAATAGTT 59.926 40.000 0.00 0.00 0.00 2.24
1366 1382 4.598807 TCCATCCCACATATCAGCAATAGT 59.401 41.667 0.00 0.00 0.00 2.12
1367 1383 5.169992 TCCATCCCACATATCAGCAATAG 57.830 43.478 0.00 0.00 0.00 1.73
1368 1384 5.251237 TGATCCATCCCACATATCAGCAATA 59.749 40.000 0.00 0.00 0.00 1.90
1369 1385 4.043686 TGATCCATCCCACATATCAGCAAT 59.956 41.667 0.00 0.00 0.00 3.56
1370 1386 3.395273 TGATCCATCCCACATATCAGCAA 59.605 43.478 0.00 0.00 0.00 3.91
1371 1387 2.981081 TGATCCATCCCACATATCAGCA 59.019 45.455 0.00 0.00 0.00 4.41
1372 1388 3.244665 TGTGATCCATCCCACATATCAGC 60.245 47.826 0.00 0.00 38.26 4.26
1373 1389 4.628963 TGTGATCCATCCCACATATCAG 57.371 45.455 0.00 0.00 38.26 2.90
1374 1390 4.413189 AGTTGTGATCCATCCCACATATCA 59.587 41.667 0.00 0.00 42.13 2.15
1375 1391 4.758674 CAGTTGTGATCCATCCCACATATC 59.241 45.833 0.00 0.00 42.13 1.63
1376 1392 4.413189 TCAGTTGTGATCCATCCCACATAT 59.587 41.667 0.00 0.00 42.13 1.78
1377 1393 3.779738 TCAGTTGTGATCCATCCCACATA 59.220 43.478 0.00 0.00 42.13 2.29
1378 1394 2.577563 TCAGTTGTGATCCATCCCACAT 59.422 45.455 0.00 0.00 42.13 3.21
1379 1395 1.984424 TCAGTTGTGATCCATCCCACA 59.016 47.619 0.00 0.00 41.04 4.17
1380 1396 2.787473 TCAGTTGTGATCCATCCCAC 57.213 50.000 0.00 0.00 0.00 4.61
1381 1397 2.618816 GCTTCAGTTGTGATCCATCCCA 60.619 50.000 0.00 0.00 30.85 4.37
1382 1398 2.019984 GCTTCAGTTGTGATCCATCCC 58.980 52.381 0.00 0.00 30.85 3.85
1383 1399 2.996631 AGCTTCAGTTGTGATCCATCC 58.003 47.619 0.00 0.00 30.85 3.51
1384 1400 4.937620 TGTTAGCTTCAGTTGTGATCCATC 59.062 41.667 0.00 0.00 30.85 3.51
1385 1401 4.910195 TGTTAGCTTCAGTTGTGATCCAT 58.090 39.130 0.00 0.00 30.85 3.41
1386 1402 4.350368 TGTTAGCTTCAGTTGTGATCCA 57.650 40.909 0.00 0.00 30.85 3.41
1387 1403 5.886960 AATGTTAGCTTCAGTTGTGATCC 57.113 39.130 0.00 0.00 30.85 3.36
1388 1404 7.334421 TCCTAAATGTTAGCTTCAGTTGTGATC 59.666 37.037 12.27 0.00 30.85 2.92
1389 1405 7.168219 TCCTAAATGTTAGCTTCAGTTGTGAT 58.832 34.615 12.27 0.00 30.85 3.06
1390 1406 6.530120 TCCTAAATGTTAGCTTCAGTTGTGA 58.470 36.000 12.27 7.36 0.00 3.58
1391 1407 6.128172 CCTCCTAAATGTTAGCTTCAGTTGTG 60.128 42.308 12.27 6.92 0.00 3.33
1392 1408 5.940470 CCTCCTAAATGTTAGCTTCAGTTGT 59.060 40.000 12.27 0.00 0.00 3.32
1393 1409 6.173339 TCCTCCTAAATGTTAGCTTCAGTTG 58.827 40.000 12.27 5.17 0.00 3.16
1394 1410 6.374417 TCCTCCTAAATGTTAGCTTCAGTT 57.626 37.500 0.00 0.08 0.00 3.16
1395 1411 6.013293 AGTTCCTCCTAAATGTTAGCTTCAGT 60.013 38.462 0.00 0.00 0.00 3.41
1396 1412 6.410540 AGTTCCTCCTAAATGTTAGCTTCAG 58.589 40.000 0.00 0.00 0.00 3.02
1397 1413 6.374417 AGTTCCTCCTAAATGTTAGCTTCA 57.626 37.500 0.00 0.00 0.00 3.02
1398 1414 7.390718 TCAAAGTTCCTCCTAAATGTTAGCTTC 59.609 37.037 0.00 0.00 0.00 3.86
1399 1415 7.231467 TCAAAGTTCCTCCTAAATGTTAGCTT 58.769 34.615 0.00 0.00 0.00 3.74
1400 1416 6.779860 TCAAAGTTCCTCCTAAATGTTAGCT 58.220 36.000 0.00 0.00 0.00 3.32
1401 1417 7.336931 TCATCAAAGTTCCTCCTAAATGTTAGC 59.663 37.037 0.00 0.00 0.00 3.09
1402 1418 8.792830 TCATCAAAGTTCCTCCTAAATGTTAG 57.207 34.615 0.00 0.00 0.00 2.34
1403 1419 9.753674 AATCATCAAAGTTCCTCCTAAATGTTA 57.246 29.630 0.00 0.00 0.00 2.41
1404 1420 8.526147 CAATCATCAAAGTTCCTCCTAAATGTT 58.474 33.333 0.00 0.00 0.00 2.71
1405 1421 7.123247 CCAATCATCAAAGTTCCTCCTAAATGT 59.877 37.037 0.00 0.00 0.00 2.71
1406 1422 7.486647 CCAATCATCAAAGTTCCTCCTAAATG 58.513 38.462 0.00 0.00 0.00 2.32
1407 1423 6.097412 GCCAATCATCAAAGTTCCTCCTAAAT 59.903 38.462 0.00 0.00 0.00 1.40
1408 1424 5.418840 GCCAATCATCAAAGTTCCTCCTAAA 59.581 40.000 0.00 0.00 0.00 1.85
1409 1425 4.949856 GCCAATCATCAAAGTTCCTCCTAA 59.050 41.667 0.00 0.00 0.00 2.69
1410 1426 4.228210 AGCCAATCATCAAAGTTCCTCCTA 59.772 41.667 0.00 0.00 0.00 2.94
1411 1427 3.011032 AGCCAATCATCAAAGTTCCTCCT 59.989 43.478 0.00 0.00 0.00 3.69
1412 1428 3.359950 AGCCAATCATCAAAGTTCCTCC 58.640 45.455 0.00 0.00 0.00 4.30
1413 1429 4.012374 TGAGCCAATCATCAAAGTTCCTC 58.988 43.478 0.00 0.00 31.12 3.71
1414 1430 4.038271 TGAGCCAATCATCAAAGTTCCT 57.962 40.909 0.00 0.00 31.12 3.36
1415 1431 4.441079 CCATGAGCCAATCATCAAAGTTCC 60.441 45.833 0.00 0.00 46.01 3.62
1416 1432 4.400251 TCCATGAGCCAATCATCAAAGTTC 59.600 41.667 0.00 0.00 46.01 3.01
1417 1433 4.346730 TCCATGAGCCAATCATCAAAGTT 58.653 39.130 0.00 0.00 46.01 2.66
1418 1434 3.952323 CTCCATGAGCCAATCATCAAAGT 59.048 43.478 0.00 0.00 46.01 2.66
1419 1435 3.243434 GCTCCATGAGCCAATCATCAAAG 60.243 47.826 4.75 0.00 46.01 2.77
1420 1436 2.691526 GCTCCATGAGCCAATCATCAAA 59.308 45.455 4.75 0.00 46.01 2.69
1421 1437 2.304092 GCTCCATGAGCCAATCATCAA 58.696 47.619 4.75 0.00 46.01 2.57
1422 1438 1.977056 GCTCCATGAGCCAATCATCA 58.023 50.000 4.75 0.00 46.01 3.07
1432 1448 1.748122 GGCACCACAGCTCCATGAG 60.748 63.158 0.00 0.00 34.17 2.90
1433 1449 2.352422 GGCACCACAGCTCCATGA 59.648 61.111 0.00 0.00 34.17 3.07
1434 1450 2.034532 TGGCACCACAGCTCCATG 59.965 61.111 0.00 0.00 34.17 3.66
1435 1451 2.353958 CTGGCACCACAGCTCCAT 59.646 61.111 0.00 0.00 34.17 3.41
1441 1457 1.970114 CCTTCAGCTGGCACCACAG 60.970 63.158 15.13 0.00 41.41 3.66
1442 1458 2.113774 CCTTCAGCTGGCACCACA 59.886 61.111 15.13 0.00 0.00 4.17
1443 1459 1.673665 CTCCTTCAGCTGGCACCAC 60.674 63.158 15.13 0.00 0.00 4.16
1444 1460 1.203441 ATCTCCTTCAGCTGGCACCA 61.203 55.000 15.13 0.00 0.00 4.17
1445 1461 0.034670 AATCTCCTTCAGCTGGCACC 60.035 55.000 15.13 0.00 0.00 5.01
1446 1462 1.093159 CAATCTCCTTCAGCTGGCAC 58.907 55.000 15.13 0.00 0.00 5.01
1447 1463 0.679002 GCAATCTCCTTCAGCTGGCA 60.679 55.000 15.13 0.00 0.00 4.92
1448 1464 0.394080 AGCAATCTCCTTCAGCTGGC 60.394 55.000 15.13 5.76 33.67 4.85
1449 1465 2.836262 CTAGCAATCTCCTTCAGCTGG 58.164 52.381 15.13 0.00 36.80 4.85
1450 1466 2.211806 GCTAGCAATCTCCTTCAGCTG 58.788 52.381 10.63 7.63 36.80 4.24
1451 1467 1.836166 TGCTAGCAATCTCCTTCAGCT 59.164 47.619 16.84 0.00 39.22 4.24
1452 1468 2.211806 CTGCTAGCAATCTCCTTCAGC 58.788 52.381 19.86 0.00 0.00 4.26
1453 1469 3.196463 CACTGCTAGCAATCTCCTTCAG 58.804 50.000 19.86 5.30 0.00 3.02
1454 1470 2.568956 ACACTGCTAGCAATCTCCTTCA 59.431 45.455 19.86 0.00 0.00 3.02
1455 1471 3.258971 ACACTGCTAGCAATCTCCTTC 57.741 47.619 19.86 0.00 0.00 3.46
1456 1472 3.710209 AACACTGCTAGCAATCTCCTT 57.290 42.857 19.86 1.70 0.00 3.36
1457 1473 3.515502 TGTAACACTGCTAGCAATCTCCT 59.484 43.478 19.86 4.06 0.00 3.69
1458 1474 3.861840 TGTAACACTGCTAGCAATCTCC 58.138 45.455 19.86 5.99 0.00 3.71
1459 1475 6.276847 AGTATGTAACACTGCTAGCAATCTC 58.723 40.000 19.86 7.92 0.00 2.75
1460 1476 6.097554 AGAGTATGTAACACTGCTAGCAATCT 59.902 38.462 19.86 3.72 0.00 2.40
1461 1477 6.199908 CAGAGTATGTAACACTGCTAGCAATC 59.800 42.308 19.86 1.24 39.47 2.67
1462 1478 6.045318 CAGAGTATGTAACACTGCTAGCAAT 58.955 40.000 19.86 5.66 39.47 3.56
1463 1479 5.185056 TCAGAGTATGTAACACTGCTAGCAA 59.815 40.000 19.86 1.64 43.98 3.91
1464 1480 4.705023 TCAGAGTATGTAACACTGCTAGCA 59.295 41.667 18.22 18.22 43.98 3.49
1465 1481 5.250235 TCAGAGTATGTAACACTGCTAGC 57.750 43.478 8.10 8.10 43.98 3.42
1466 1482 6.212235 CCATCAGAGTATGTAACACTGCTAG 58.788 44.000 0.00 0.00 43.98 3.42
1467 1483 5.451937 GCCATCAGAGTATGTAACACTGCTA 60.452 44.000 0.00 0.00 43.98 3.49
1468 1484 4.681781 GCCATCAGAGTATGTAACACTGCT 60.682 45.833 0.00 0.00 43.98 4.24
1469 1485 3.557595 GCCATCAGAGTATGTAACACTGC 59.442 47.826 0.00 0.00 43.98 4.40
1470 1486 4.568359 GTGCCATCAGAGTATGTAACACTG 59.432 45.833 0.00 0.00 45.21 3.66
1471 1487 4.222810 TGTGCCATCAGAGTATGTAACACT 59.777 41.667 0.00 0.00 30.59 3.55
1472 1488 4.503910 TGTGCCATCAGAGTATGTAACAC 58.496 43.478 0.00 0.00 0.00 3.32
1473 1489 4.466015 TCTGTGCCATCAGAGTATGTAACA 59.534 41.667 0.00 0.00 39.20 2.41
1474 1490 4.806247 GTCTGTGCCATCAGAGTATGTAAC 59.194 45.833 4.07 0.00 43.76 2.50
1475 1491 4.711846 AGTCTGTGCCATCAGAGTATGTAA 59.288 41.667 8.55 0.00 43.59 2.41
1476 1492 4.281657 AGTCTGTGCCATCAGAGTATGTA 58.718 43.478 8.55 0.00 43.59 2.29
1477 1493 3.102972 AGTCTGTGCCATCAGAGTATGT 58.897 45.455 8.55 0.00 43.59 2.29
1478 1494 3.384146 AGAGTCTGTGCCATCAGAGTATG 59.616 47.826 9.79 0.00 44.85 2.39
1479 1495 3.641046 AGAGTCTGTGCCATCAGAGTAT 58.359 45.455 9.79 5.72 44.85 2.12
1480 1496 3.093057 AGAGTCTGTGCCATCAGAGTA 57.907 47.619 9.79 0.00 44.85 2.59
1481 1497 1.935799 AGAGTCTGTGCCATCAGAGT 58.064 50.000 9.64 9.64 46.68 3.24
1482 1498 3.001414 CAAAGAGTCTGTGCCATCAGAG 58.999 50.000 0.00 0.00 43.76 3.35
1483 1499 2.289882 CCAAAGAGTCTGTGCCATCAGA 60.290 50.000 4.61 0.00 41.40 3.27
1484 1500 2.082231 CCAAAGAGTCTGTGCCATCAG 58.918 52.381 4.61 0.00 36.85 2.90
1485 1501 1.421268 ACCAAAGAGTCTGTGCCATCA 59.579 47.619 4.61 0.00 0.00 3.07
1486 1502 2.191128 ACCAAAGAGTCTGTGCCATC 57.809 50.000 4.61 0.00 0.00 3.51
1487 1503 3.614092 CATACCAAAGAGTCTGTGCCAT 58.386 45.455 4.61 0.00 0.00 4.40
1488 1504 2.290260 CCATACCAAAGAGTCTGTGCCA 60.290 50.000 4.61 0.00 0.00 4.92
1489 1505 2.359900 CCATACCAAAGAGTCTGTGCC 58.640 52.381 4.61 0.00 0.00 5.01
1490 1506 1.740025 GCCATACCAAAGAGTCTGTGC 59.260 52.381 4.61 0.00 0.00 4.57
1491 1507 3.005554 CTGCCATACCAAAGAGTCTGTG 58.994 50.000 3.00 3.00 0.00 3.66
1492 1508 2.639839 ACTGCCATACCAAAGAGTCTGT 59.360 45.455 0.00 0.00 0.00 3.41
1493 1509 3.340814 ACTGCCATACCAAAGAGTCTG 57.659 47.619 0.00 0.00 0.00 3.51
1494 1510 3.560025 CCAACTGCCATACCAAAGAGTCT 60.560 47.826 0.00 0.00 0.00 3.24
1495 1511 2.749621 CCAACTGCCATACCAAAGAGTC 59.250 50.000 0.00 0.00 0.00 3.36
1496 1512 2.375174 TCCAACTGCCATACCAAAGAGT 59.625 45.455 0.00 0.00 0.00 3.24
1497 1513 3.012518 CTCCAACTGCCATACCAAAGAG 58.987 50.000 0.00 0.00 0.00 2.85
1498 1514 2.642311 TCTCCAACTGCCATACCAAAGA 59.358 45.455 0.00 0.00 0.00 2.52
1499 1515 3.012518 CTCTCCAACTGCCATACCAAAG 58.987 50.000 0.00 0.00 0.00 2.77
1500 1516 2.375174 ACTCTCCAACTGCCATACCAAA 59.625 45.455 0.00 0.00 0.00 3.28
1501 1517 1.985159 ACTCTCCAACTGCCATACCAA 59.015 47.619 0.00 0.00 0.00 3.67
1502 1518 1.656587 ACTCTCCAACTGCCATACCA 58.343 50.000 0.00 0.00 0.00 3.25
1503 1519 3.906720 TTACTCTCCAACTGCCATACC 57.093 47.619 0.00 0.00 0.00 2.73
1504 1520 4.130118 CCATTACTCTCCAACTGCCATAC 58.870 47.826 0.00 0.00 0.00 2.39
1505 1521 3.780294 ACCATTACTCTCCAACTGCCATA 59.220 43.478 0.00 0.00 0.00 2.74
1506 1522 2.578021 ACCATTACTCTCCAACTGCCAT 59.422 45.455 0.00 0.00 0.00 4.40
1507 1523 1.985159 ACCATTACTCTCCAACTGCCA 59.015 47.619 0.00 0.00 0.00 4.92
1508 1524 2.789409 ACCATTACTCTCCAACTGCC 57.211 50.000 0.00 0.00 0.00 4.85
1509 1525 8.451908 AATAATTACCATTACTCTCCAACTGC 57.548 34.615 0.00 0.00 0.00 4.40
1510 1526 9.057089 GGAATAATTACCATTACTCTCCAACTG 57.943 37.037 0.00 0.00 29.39 3.16
1511 1527 8.778059 TGGAATAATTACCATTACTCTCCAACT 58.222 33.333 0.00 0.00 32.97 3.16
1512 1528 8.837389 GTGGAATAATTACCATTACTCTCCAAC 58.163 37.037 0.00 0.00 35.34 3.77
1513 1529 8.778059 AGTGGAATAATTACCATTACTCTCCAA 58.222 33.333 0.00 0.00 35.34 3.53
1514 1530 8.331931 AGTGGAATAATTACCATTACTCTCCA 57.668 34.615 0.00 0.00 38.48 3.86
1515 1531 9.930693 CTAGTGGAATAATTACCATTACTCTCC 57.069 37.037 0.00 0.00 38.48 3.71
1516 1532 9.425577 GCTAGTGGAATAATTACCATTACTCTC 57.574 37.037 0.00 0.00 38.48 3.20
1517 1533 9.160412 AGCTAGTGGAATAATTACCATTACTCT 57.840 33.333 0.00 0.00 38.48 3.24
1518 1534 9.425577 GAGCTAGTGGAATAATTACCATTACTC 57.574 37.037 0.00 5.41 38.48 2.59
1519 1535 8.376270 GGAGCTAGTGGAATAATTACCATTACT 58.624 37.037 0.00 0.00 38.48 2.24
1520 1536 7.606839 GGGAGCTAGTGGAATAATTACCATTAC 59.393 40.741 0.00 0.00 38.48 1.89
1521 1537 7.516209 AGGGAGCTAGTGGAATAATTACCATTA 59.484 37.037 0.00 0.00 38.48 1.90
1522 1538 6.332901 AGGGAGCTAGTGGAATAATTACCATT 59.667 38.462 0.00 0.00 38.48 3.16
1523 1539 5.852250 AGGGAGCTAGTGGAATAATTACCAT 59.148 40.000 0.00 0.00 38.48 3.55
1524 1540 5.071788 CAGGGAGCTAGTGGAATAATTACCA 59.928 44.000 0.00 0.00 0.00 3.25
1575 1593 2.774234 ACTGCAGGTATATGAACTGGCT 59.226 45.455 19.93 0.00 32.98 4.75
1624 1643 4.401925 AGAACAACCAGAGGAAGAAATGG 58.598 43.478 0.00 0.00 38.83 3.16
1633 1652 5.152623 TGTTATGAGAGAACAACCAGAGG 57.847 43.478 0.00 0.00 33.93 3.69
1781 2823 9.335891 CTACATGTGTAAGCTATTAATCTCTCG 57.664 37.037 9.11 0.00 0.00 4.04
1801 2843 6.570692 ACCCGACTAGTAATTGAACTACATG 58.429 40.000 0.00 0.00 0.00 3.21
1804 2846 6.750963 CAGAACCCGACTAGTAATTGAACTAC 59.249 42.308 0.00 0.00 0.00 2.73
1807 2849 5.717119 TCAGAACCCGACTAGTAATTGAAC 58.283 41.667 0.00 0.00 0.00 3.18
1873 2915 7.685849 AGGTCCCACTATTTTATAAGTAGCA 57.314 36.000 6.81 0.00 0.00 3.49
1970 3012 4.073293 ACTTAAAGATGGCATACCGGAG 57.927 45.455 9.46 0.00 39.70 4.63
1973 3015 6.671614 TGTAAACTTAAAGATGGCATACCG 57.328 37.500 0.00 0.00 39.70 4.02
2024 3067 6.472808 TCTTCCGGAAATTGTAAACAAAAACG 59.527 34.615 19.39 0.00 39.55 3.60
2043 3086 1.721926 GAACTTCAAGCGTCTCTTCCG 59.278 52.381 0.00 0.00 31.27 4.30
2126 3169 6.512903 CGAAGACAGAAGTTCAGTACACTGTA 60.513 42.308 5.50 0.00 42.37 2.74
2130 3173 3.982058 CCGAAGACAGAAGTTCAGTACAC 59.018 47.826 5.50 0.00 0.00 2.90
2135 3178 1.270305 TGCCCGAAGACAGAAGTTCAG 60.270 52.381 5.50 0.00 0.00 3.02
2150 3193 1.111116 ATGCAATGATCCCTTGCCCG 61.111 55.000 20.95 0.00 46.61 6.13
2172 3215 4.946784 ATCCTTCACGCATGTAAAGTTC 57.053 40.909 0.00 0.00 0.00 3.01
2193 3236 5.448768 GCTTGTCAGACGAAGCATAGTACTA 60.449 44.000 22.60 4.77 43.44 1.82
2194 3237 4.675671 GCTTGTCAGACGAAGCATAGTACT 60.676 45.833 22.60 0.00 43.44 2.73
2195 3238 3.548268 GCTTGTCAGACGAAGCATAGTAC 59.452 47.826 22.60 0.00 43.44 2.73
2247 3293 2.932614 TGTTTCCATTTTGCAAACCACG 59.067 40.909 12.39 0.38 30.32 4.94
2271 3317 8.725148 CAAATATACTTGCAGTCCAGGATAATC 58.275 37.037 0.00 0.00 0.00 1.75
2281 3327 7.806690 TGAGTTGTTCAAATATACTTGCAGTC 58.193 34.615 0.00 0.00 31.34 3.51
2297 3349 8.758633 ATATACGCCTACAATATGAGTTGTTC 57.241 34.615 0.00 0.00 42.08 3.18
2305 3357 9.504710 GTTCAGTCTATATACGCCTACAATATG 57.495 37.037 0.00 0.00 0.00 1.78
2309 3361 6.947644 TGTTCAGTCTATATACGCCTACAA 57.052 37.500 0.00 0.00 0.00 2.41
2310 3362 7.447545 AGAATGTTCAGTCTATATACGCCTACA 59.552 37.037 0.85 0.00 0.00 2.74
2311 3363 7.818642 AGAATGTTCAGTCTATATACGCCTAC 58.181 38.462 0.85 0.00 0.00 3.18
2312 3364 7.664318 TGAGAATGTTCAGTCTATATACGCCTA 59.336 37.037 2.80 0.00 0.00 3.93
2313 3365 6.490381 TGAGAATGTTCAGTCTATATACGCCT 59.510 38.462 2.80 0.00 0.00 5.52
2314 3366 6.678878 TGAGAATGTTCAGTCTATATACGCC 58.321 40.000 2.80 0.00 0.00 5.68
2315 3367 6.804295 CCTGAGAATGTTCAGTCTATATACGC 59.196 42.308 2.80 0.00 42.41 4.42
2316 3368 8.100508 TCCTGAGAATGTTCAGTCTATATACG 57.899 38.462 2.80 0.00 42.41 3.06
2317 3369 8.519526 CCTCCTGAGAATGTTCAGTCTATATAC 58.480 40.741 2.80 0.00 42.41 1.47
2318 3370 8.228206 ACCTCCTGAGAATGTTCAGTCTATATA 58.772 37.037 2.80 0.00 42.41 0.86
2319 3371 7.015098 CACCTCCTGAGAATGTTCAGTCTATAT 59.985 40.741 2.80 0.00 42.41 0.86
2320 3372 6.322456 CACCTCCTGAGAATGTTCAGTCTATA 59.678 42.308 2.80 0.00 42.41 1.31
2321 3373 5.128499 CACCTCCTGAGAATGTTCAGTCTAT 59.872 44.000 2.80 0.00 42.41 1.98
2322 3374 4.464244 CACCTCCTGAGAATGTTCAGTCTA 59.536 45.833 2.80 0.00 42.41 2.59
2323 3375 3.260380 CACCTCCTGAGAATGTTCAGTCT 59.740 47.826 2.41 2.41 42.41 3.24
2324 3376 3.594134 CACCTCCTGAGAATGTTCAGTC 58.406 50.000 0.00 0.00 42.41 3.51
2325 3377 2.304180 CCACCTCCTGAGAATGTTCAGT 59.696 50.000 0.00 0.00 42.41 3.41
2326 3378 2.355513 CCCACCTCCTGAGAATGTTCAG 60.356 54.545 0.00 0.77 43.35 3.02
2327 3379 1.630369 CCCACCTCCTGAGAATGTTCA 59.370 52.381 0.00 0.00 0.00 3.18
2328 3380 1.909302 TCCCACCTCCTGAGAATGTTC 59.091 52.381 0.00 0.00 0.00 3.18
2329 3381 2.044793 TCCCACCTCCTGAGAATGTT 57.955 50.000 0.00 0.00 0.00 2.71
2330 3382 1.912043 CTTCCCACCTCCTGAGAATGT 59.088 52.381 0.00 0.00 0.00 2.71
2331 3383 2.093235 GTCTTCCCACCTCCTGAGAATG 60.093 54.545 0.00 0.00 0.00 2.67
2332 3384 2.192263 GTCTTCCCACCTCCTGAGAAT 58.808 52.381 0.00 0.00 0.00 2.40
2333 3385 1.132849 TGTCTTCCCACCTCCTGAGAA 60.133 52.381 0.00 0.00 0.00 2.87
2334 3386 0.487325 TGTCTTCCCACCTCCTGAGA 59.513 55.000 0.00 0.00 0.00 3.27
2335 3387 1.352083 TTGTCTTCCCACCTCCTGAG 58.648 55.000 0.00 0.00 0.00 3.35
2336 3388 1.699634 CTTTGTCTTCCCACCTCCTGA 59.300 52.381 0.00 0.00 0.00 3.86
2337 3389 1.699634 TCTTTGTCTTCCCACCTCCTG 59.300 52.381 0.00 0.00 0.00 3.86
2338 3390 1.981495 CTCTTTGTCTTCCCACCTCCT 59.019 52.381 0.00 0.00 0.00 3.69
2339 3391 1.003696 CCTCTTTGTCTTCCCACCTCC 59.996 57.143 0.00 0.00 0.00 4.30
2340 3392 1.978580 TCCTCTTTGTCTTCCCACCTC 59.021 52.381 0.00 0.00 0.00 3.85
2341 3393 1.981495 CTCCTCTTTGTCTTCCCACCT 59.019 52.381 0.00 0.00 0.00 4.00
2342 3394 1.700186 ACTCCTCTTTGTCTTCCCACC 59.300 52.381 0.00 0.00 0.00 4.61
2343 3395 3.306849 GGTACTCCTCTTTGTCTTCCCAC 60.307 52.174 0.00 0.00 0.00 4.61
2344 3396 2.904434 GGTACTCCTCTTTGTCTTCCCA 59.096 50.000 0.00 0.00 0.00 4.37
2345 3397 2.094130 CGGTACTCCTCTTTGTCTTCCC 60.094 54.545 0.00 0.00 0.00 3.97
2346 3398 2.824341 TCGGTACTCCTCTTTGTCTTCC 59.176 50.000 0.00 0.00 0.00 3.46
2347 3399 3.670091 CGTCGGTACTCCTCTTTGTCTTC 60.670 52.174 0.00 0.00 0.00 2.87
2348 3400 2.228343 CGTCGGTACTCCTCTTTGTCTT 59.772 50.000 0.00 0.00 0.00 3.01
2349 3401 1.811359 CGTCGGTACTCCTCTTTGTCT 59.189 52.381 0.00 0.00 0.00 3.41
2350 3402 1.135460 CCGTCGGTACTCCTCTTTGTC 60.135 57.143 2.08 0.00 0.00 3.18
2351 3403 0.886563 CCGTCGGTACTCCTCTTTGT 59.113 55.000 2.08 0.00 0.00 2.83
2352 3404 0.172803 CCCGTCGGTACTCCTCTTTG 59.827 60.000 11.06 0.00 0.00 2.77
2353 3405 0.251519 ACCCGTCGGTACTCCTCTTT 60.252 55.000 11.06 0.00 42.18 2.52
2354 3406 0.964358 CACCCGTCGGTACTCCTCTT 60.964 60.000 11.06 0.00 42.04 2.85
2355 3407 1.378250 CACCCGTCGGTACTCCTCT 60.378 63.158 11.06 0.00 42.04 3.69
2356 3408 2.413142 CCACCCGTCGGTACTCCTC 61.413 68.421 11.06 0.00 42.04 3.71
2357 3409 2.362120 CCACCCGTCGGTACTCCT 60.362 66.667 11.06 0.00 42.04 3.69
2358 3410 4.139234 GCCACCCGTCGGTACTCC 62.139 72.222 11.06 0.00 42.04 3.85
2359 3411 4.139234 GGCCACCCGTCGGTACTC 62.139 72.222 11.06 0.00 42.04 2.59
2378 3430 2.023741 CATCGTCGTCCCGTACCG 59.976 66.667 0.00 0.00 0.00 4.02
2379 3431 2.410469 CCATCGTCGTCCCGTACC 59.590 66.667 0.00 0.00 0.00 3.34
2380 3432 2.278401 GCCATCGTCGTCCCGTAC 60.278 66.667 0.00 0.00 0.00 3.67
2381 3433 3.520862 GGCCATCGTCGTCCCGTA 61.521 66.667 0.00 0.00 0.00 4.02
2385 3437 3.912907 ATCGGGCCATCGTCGTCC 61.913 66.667 4.39 0.00 0.00 4.79
2386 3438 2.658593 CATCGGGCCATCGTCGTC 60.659 66.667 4.39 0.00 0.00 4.20
2387 3439 4.891727 GCATCGGGCCATCGTCGT 62.892 66.667 4.39 0.00 36.11 4.34
2416 3468 4.754667 GTTGCGTCCTCCCCGTCC 62.755 72.222 0.00 0.00 0.00 4.79
2422 3474 3.723348 GTTGCCGTTGCGTCCTCC 61.723 66.667 0.00 0.00 41.78 4.30
2423 3475 4.072088 CGTTGCCGTTGCGTCCTC 62.072 66.667 0.00 0.00 41.78 3.71
2430 3482 4.973360 CCGTTGCCGTTGCCGTTG 62.973 66.667 0.00 0.00 36.33 4.10
2445 3497 2.882876 CGGAATTTAATACGTTCGCCG 58.117 47.619 0.00 0.00 44.03 6.46
2446 3498 2.632228 GCGGAATTTAATACGTTCGCC 58.368 47.619 0.00 0.00 0.00 5.54
2447 3499 2.283661 CGCGGAATTTAATACGTTCGC 58.716 47.619 0.00 0.00 0.00 4.70
2448 3500 2.283661 GCGCGGAATTTAATACGTTCG 58.716 47.619 8.83 0.00 0.00 3.95
2449 3501 2.632228 GGCGCGGAATTTAATACGTTC 58.368 47.619 8.83 0.00 0.00 3.95
2450 3502 1.004715 CGGCGCGGAATTTAATACGTT 60.005 47.619 9.72 0.00 0.00 3.99
2451 3503 0.578211 CGGCGCGGAATTTAATACGT 59.422 50.000 9.72 0.00 0.00 3.57
2452 3504 0.578211 ACGGCGCGGAATTTAATACG 59.422 50.000 22.76 7.36 0.00 3.06
2453 3505 1.593933 TCACGGCGCGGAATTTAATAC 59.406 47.619 22.76 0.00 0.00 1.89
2454 3506 1.937278 TCACGGCGCGGAATTTAATA 58.063 45.000 22.76 0.00 0.00 0.98
2455 3507 1.305201 ATCACGGCGCGGAATTTAAT 58.695 45.000 22.76 2.82 0.00 1.40
2456 3508 1.862201 CTATCACGGCGCGGAATTTAA 59.138 47.619 22.76 1.12 0.00 1.52
2457 3509 1.493772 CTATCACGGCGCGGAATTTA 58.506 50.000 22.76 6.72 0.00 1.40
2458 3510 1.157870 CCTATCACGGCGCGGAATTT 61.158 55.000 22.76 5.91 0.00 1.82
2459 3511 1.594293 CCTATCACGGCGCGGAATT 60.594 57.895 22.76 7.64 0.00 2.17
2460 3512 2.029073 CCTATCACGGCGCGGAAT 59.971 61.111 22.76 15.74 0.00 3.01
2461 3513 3.133767 CTCCTATCACGGCGCGGAA 62.134 63.158 22.76 9.50 0.00 4.30
2462 3514 3.592814 CTCCTATCACGGCGCGGA 61.593 66.667 22.76 9.89 0.00 5.54
2463 3515 3.592814 TCTCCTATCACGGCGCGG 61.593 66.667 14.03 14.03 0.00 6.46
2464 3516 2.353607 GTCTCCTATCACGGCGCG 60.354 66.667 6.90 0.00 0.00 6.86
2465 3517 2.353607 CGTCTCCTATCACGGCGC 60.354 66.667 6.90 0.00 32.19 6.53
2466 3518 1.158484 TCTCGTCTCCTATCACGGCG 61.158 60.000 4.80 4.80 36.64 6.46
2467 3519 0.308376 GTCTCGTCTCCTATCACGGC 59.692 60.000 0.00 0.00 36.64 5.68
2468 3520 0.582482 CGTCTCGTCTCCTATCACGG 59.418 60.000 0.00 0.00 36.64 4.94
2469 3521 1.523515 CTCGTCTCGTCTCCTATCACG 59.476 57.143 0.00 0.00 37.36 4.35
2470 3522 2.540931 GTCTCGTCTCGTCTCCTATCAC 59.459 54.545 0.00 0.00 0.00 3.06
2471 3523 2.798853 CGTCTCGTCTCGTCTCCTATCA 60.799 54.545 0.00 0.00 0.00 2.15
2472 3524 1.788308 CGTCTCGTCTCGTCTCCTATC 59.212 57.143 0.00 0.00 0.00 2.08
2473 3525 1.408340 TCGTCTCGTCTCGTCTCCTAT 59.592 52.381 0.00 0.00 0.00 2.57
2474 3526 0.813821 TCGTCTCGTCTCGTCTCCTA 59.186 55.000 0.00 0.00 0.00 2.94
2475 3527 0.458889 CTCGTCTCGTCTCGTCTCCT 60.459 60.000 0.00 0.00 0.00 3.69
2476 3528 0.458197 TCTCGTCTCGTCTCGTCTCC 60.458 60.000 0.00 0.00 0.00 3.71
2477 3529 0.641783 GTCTCGTCTCGTCTCGTCTC 59.358 60.000 0.00 0.00 0.00 3.36
2478 3530 1.072116 CGTCTCGTCTCGTCTCGTCT 61.072 60.000 0.00 0.00 0.00 4.18
2479 3531 1.341133 CGTCTCGTCTCGTCTCGTC 59.659 63.158 0.00 0.00 0.00 4.20
2480 3532 2.093473 CCGTCTCGTCTCGTCTCGT 61.093 63.158 0.00 0.00 0.00 4.18
2481 3533 2.696238 CCGTCTCGTCTCGTCTCG 59.304 66.667 0.00 0.00 0.00 4.04
2482 3534 1.422950 CTCCCGTCTCGTCTCGTCTC 61.423 65.000 0.00 0.00 0.00 3.36
2483 3535 1.448189 CTCCCGTCTCGTCTCGTCT 60.448 63.158 0.00 0.00 0.00 4.18
2484 3536 0.459237 TACTCCCGTCTCGTCTCGTC 60.459 60.000 0.00 0.00 0.00 4.20
2485 3537 0.739112 GTACTCCCGTCTCGTCTCGT 60.739 60.000 0.00 0.00 0.00 4.18
2486 3538 1.750572 CGTACTCCCGTCTCGTCTCG 61.751 65.000 0.00 0.00 0.00 4.04
2487 3539 1.427592 CCGTACTCCCGTCTCGTCTC 61.428 65.000 0.00 0.00 0.00 3.36
2488 3540 1.449246 CCGTACTCCCGTCTCGTCT 60.449 63.158 0.00 0.00 0.00 4.18
2489 3541 2.467826 CCCGTACTCCCGTCTCGTC 61.468 68.421 0.00 0.00 0.00 4.20
2490 3542 2.437359 CCCGTACTCCCGTCTCGT 60.437 66.667 0.00 0.00 0.00 4.18
2491 3543 1.589716 AAACCCGTACTCCCGTCTCG 61.590 60.000 0.00 0.00 0.00 4.04
2492 3544 0.605083 AAAACCCGTACTCCCGTCTC 59.395 55.000 0.00 0.00 0.00 3.36
2493 3545 0.605083 GAAAACCCGTACTCCCGTCT 59.395 55.000 0.00 0.00 0.00 4.18
2494 3546 0.390340 GGAAAACCCGTACTCCCGTC 60.390 60.000 0.00 0.00 0.00 4.79
2495 3547 1.673477 GGAAAACCCGTACTCCCGT 59.327 57.895 0.00 0.00 0.00 5.28
2496 3548 4.604114 GGAAAACCCGTACTCCCG 57.396 61.111 0.00 0.00 0.00 5.14
2505 3557 1.271488 TGATGGTACCACGGAAAACCC 60.271 52.381 19.09 0.00 0.00 4.11
2506 3558 2.188062 TGATGGTACCACGGAAAACC 57.812 50.000 19.09 0.00 0.00 3.27
2507 3559 2.681344 GGATGATGGTACCACGGAAAAC 59.319 50.000 19.09 5.30 0.00 2.43
2508 3560 2.356330 GGGATGATGGTACCACGGAAAA 60.356 50.000 19.09 0.00 0.00 2.29
2509 3561 1.210967 GGGATGATGGTACCACGGAAA 59.789 52.381 19.09 1.22 0.00 3.13
2510 3562 0.834612 GGGATGATGGTACCACGGAA 59.165 55.000 19.09 3.22 0.00 4.30
2511 3563 1.052124 GGGGATGATGGTACCACGGA 61.052 60.000 19.09 4.06 0.00 4.69
2512 3564 1.054406 AGGGGATGATGGTACCACGG 61.054 60.000 19.09 0.00 31.66 4.94
2513 3565 0.106708 CAGGGGATGATGGTACCACG 59.893 60.000 19.09 0.00 31.66 4.94
2514 3566 1.134098 CACAGGGGATGATGGTACCAC 60.134 57.143 19.09 11.95 0.00 4.16
2515 3567 1.212375 CACAGGGGATGATGGTACCA 58.788 55.000 18.99 18.99 0.00 3.25
2516 3568 0.179018 GCACAGGGGATGATGGTACC 60.179 60.000 4.43 4.43 0.00 3.34
2517 3569 0.839946 AGCACAGGGGATGATGGTAC 59.160 55.000 0.00 0.00 0.00 3.34
2518 3570 0.839277 CAGCACAGGGGATGATGGTA 59.161 55.000 0.00 0.00 29.74 3.25
2519 3571 1.210204 ACAGCACAGGGGATGATGGT 61.210 55.000 0.00 0.00 37.79 3.55
2520 3572 0.750546 CACAGCACAGGGGATGATGG 60.751 60.000 0.00 0.00 37.79 3.51
2521 3573 1.381928 GCACAGCACAGGGGATGATG 61.382 60.000 0.00 0.00 39.38 3.07
2522 3574 1.077212 GCACAGCACAGGGGATGAT 60.077 57.895 0.00 0.00 0.00 2.45
2523 3575 2.226315 AGCACAGCACAGGGGATGA 61.226 57.895 0.00 0.00 0.00 2.92
2524 3576 2.044555 CAGCACAGCACAGGGGATG 61.045 63.158 0.00 0.00 0.00 3.51
2525 3577 2.353958 CAGCACAGCACAGGGGAT 59.646 61.111 0.00 0.00 0.00 3.85
2526 3578 3.957586 CCAGCACAGCACAGGGGA 61.958 66.667 0.00 0.00 0.00 4.81
2529 3581 4.655647 AGCCCAGCACAGCACAGG 62.656 66.667 0.00 0.00 0.00 4.00
2530 3582 3.362797 CAGCCCAGCACAGCACAG 61.363 66.667 0.00 0.00 0.00 3.66
2534 3586 4.719106 AGAGCAGCCCAGCACAGC 62.719 66.667 0.00 0.00 36.85 4.40
2535 3587 2.033757 AAGAGCAGCCCAGCACAG 59.966 61.111 0.00 0.00 36.85 3.66
2536 3588 2.281970 CAAGAGCAGCCCAGCACA 60.282 61.111 0.00 0.00 36.85 4.57
2537 3589 3.745803 GCAAGAGCAGCCCAGCAC 61.746 66.667 0.00 0.00 41.58 4.40
2580 3632 3.693578 ACTACTACTTTACTGCTCGGGAC 59.306 47.826 0.00 0.00 0.00 4.46
2581 3633 3.960571 ACTACTACTTTACTGCTCGGGA 58.039 45.455 0.00 0.00 0.00 5.14
2582 3634 4.260538 CGTACTACTACTTTACTGCTCGGG 60.261 50.000 0.00 0.00 0.00 5.14
2583 3635 4.331168 ACGTACTACTACTTTACTGCTCGG 59.669 45.833 0.00 0.00 0.00 4.63
2584 3636 5.462034 ACGTACTACTACTTTACTGCTCG 57.538 43.478 0.00 0.00 0.00 5.03
2585 3637 5.488458 CGACGTACTACTACTTTACTGCTC 58.512 45.833 0.00 0.00 0.00 4.26
2586 3638 4.331168 CCGACGTACTACTACTTTACTGCT 59.669 45.833 0.00 0.00 0.00 4.24
2587 3639 4.093556 ACCGACGTACTACTACTTTACTGC 59.906 45.833 0.00 0.00 0.00 4.40
2588 3640 5.578727 AGACCGACGTACTACTACTTTACTG 59.421 44.000 0.00 0.00 0.00 2.74
2589 3641 5.578727 CAGACCGACGTACTACTACTTTACT 59.421 44.000 0.00 0.00 0.00 2.24
2590 3642 5.725316 GCAGACCGACGTACTACTACTTTAC 60.725 48.000 0.00 0.00 0.00 2.01
2591 3643 4.330074 GCAGACCGACGTACTACTACTTTA 59.670 45.833 0.00 0.00 0.00 1.85
2592 3644 3.126000 GCAGACCGACGTACTACTACTTT 59.874 47.826 0.00 0.00 0.00 2.66
2593 3645 2.675348 GCAGACCGACGTACTACTACTT 59.325 50.000 0.00 0.00 0.00 2.24
2594 3646 2.093764 AGCAGACCGACGTACTACTACT 60.094 50.000 0.00 0.00 0.00 2.57
2595 3647 2.275318 AGCAGACCGACGTACTACTAC 58.725 52.381 0.00 0.00 0.00 2.73
2596 3648 2.544685 GAGCAGACCGACGTACTACTA 58.455 52.381 0.00 0.00 0.00 1.82
2597 3649 1.367659 GAGCAGACCGACGTACTACT 58.632 55.000 0.00 0.00 0.00 2.57
2598 3650 0.026027 CGAGCAGACCGACGTACTAC 59.974 60.000 0.00 0.00 0.00 2.73
2599 3651 1.699656 GCGAGCAGACCGACGTACTA 61.700 60.000 0.00 0.00 0.00 1.82
2600 3652 3.036783 GCGAGCAGACCGACGTACT 62.037 63.158 0.00 0.00 0.00 2.73
2601 3653 2.576317 GCGAGCAGACCGACGTAC 60.576 66.667 0.00 0.00 0.00 3.67
2602 3654 3.807538 GGCGAGCAGACCGACGTA 61.808 66.667 0.00 0.00 0.00 3.57
2618 3670 2.829206 TTTGTTGTGAGCGGTGCGG 61.829 57.895 0.00 0.00 0.00 5.69
2619 3671 1.654137 GTTTGTTGTGAGCGGTGCG 60.654 57.895 0.00 0.00 0.00 5.34
2620 3672 0.865639 GTGTTTGTTGTGAGCGGTGC 60.866 55.000 0.00 0.00 0.00 5.01
2621 3673 0.588730 CGTGTTTGTTGTGAGCGGTG 60.589 55.000 0.00 0.00 0.00 4.94
2622 3674 1.719117 CGTGTTTGTTGTGAGCGGT 59.281 52.632 0.00 0.00 0.00 5.68
2623 3675 1.654137 GCGTGTTTGTTGTGAGCGG 60.654 57.895 0.00 0.00 0.00 5.52
2624 3676 1.061729 TGCGTGTTTGTTGTGAGCG 59.938 52.632 0.00 0.00 0.00 5.03
2625 3677 0.865639 GGTGCGTGTTTGTTGTGAGC 60.866 55.000 0.00 0.00 0.00 4.26
2626 3678 0.732571 AGGTGCGTGTTTGTTGTGAG 59.267 50.000 0.00 0.00 0.00 3.51
2627 3679 0.730265 GAGGTGCGTGTTTGTTGTGA 59.270 50.000 0.00 0.00 0.00 3.58
2628 3680 0.588730 CGAGGTGCGTGTTTGTTGTG 60.589 55.000 0.00 0.00 34.64 3.33
2629 3681 0.741574 TCGAGGTGCGTGTTTGTTGT 60.742 50.000 0.00 0.00 41.80 3.32
2630 3682 0.042188 CTCGAGGTGCGTGTTTGTTG 60.042 55.000 3.91 0.00 41.80 3.33
2631 3683 1.157870 CCTCGAGGTGCGTGTTTGTT 61.158 55.000 24.04 0.00 41.80 2.83
2632 3684 1.594293 CCTCGAGGTGCGTGTTTGT 60.594 57.895 24.04 0.00 41.80 2.83
2633 3685 2.954753 GCCTCGAGGTGCGTGTTTG 61.955 63.158 31.43 3.47 41.80 2.93
2634 3686 2.665185 GCCTCGAGGTGCGTGTTT 60.665 61.111 31.43 0.00 41.80 2.83
2635 3687 3.865929 CTGCCTCGAGGTGCGTGTT 62.866 63.158 31.43 0.00 41.80 3.32
2636 3688 4.363990 CTGCCTCGAGGTGCGTGT 62.364 66.667 31.43 0.00 41.80 4.49


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.