Multiple sequence alignment - TraesCS5B01G402700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G402700 chr5B 100.000 3658 0 0 1 3658 579407763 579404106 0.000000e+00 6756
1 TraesCS5B01G402700 chr5B 93.491 507 26 1 2002 2501 579103020 579102514 0.000000e+00 747
2 TraesCS5B01G402700 chr5B 80.512 508 97 2 2056 2562 579521524 579522030 4.430000e-104 388
3 TraesCS5B01G402700 chr5B 92.213 244 19 0 289 532 400546034 400546277 2.700000e-91 346
4 TraesCS5B01G402700 chr5B 90.476 210 13 3 2498 2707 579083251 579083049 1.670000e-68 270
5 TraesCS5B01G402700 chr5D 93.162 2018 108 12 738 2734 472468078 472466070 0.000000e+00 2935
6 TraesCS5B01G402700 chr5D 81.635 844 135 15 1109 1939 472568634 472569470 0.000000e+00 682
7 TraesCS5B01G402700 chr5D 80.691 839 152 6 1109 1939 472520501 472521337 0.000000e+00 643
8 TraesCS5B01G402700 chr5D 82.621 702 62 25 2726 3369 472465712 472465013 1.910000e-157 566
9 TraesCS5B01G402700 chr5D 80.810 568 107 2 2050 2616 472570569 472571135 9.320000e-121 444
10 TraesCS5B01G402700 chr5D 93.151 292 19 1 3358 3649 472464456 472464166 9.390000e-116 427
11 TraesCS5B01G402700 chr5D 82.889 450 75 2 2086 2534 472522119 472522567 1.580000e-108 403
12 TraesCS5B01G402700 chr5D 92.531 241 18 0 292 532 67572370 67572130 2.700000e-91 346
13 TraesCS5B01G402700 chr5D 87.347 245 17 10 54 291 472473349 472473112 6.020000e-68 268
14 TraesCS5B01G402700 chr5D 87.500 168 15 3 558 720 472468233 472468067 4.820000e-44 189
15 TraesCS5B01G402700 chr5A 94.353 1771 85 6 912 2667 591994281 591992511 0.000000e+00 2702
16 TraesCS5B01G402700 chr5A 84.872 1018 101 24 2688 3655 591992235 591991221 0.000000e+00 977
17 TraesCS5B01G402700 chr5A 80.144 836 153 8 1105 1938 592034145 592034969 2.410000e-171 612
18 TraesCS5B01G402700 chr5A 81.556 450 81 2 2086 2534 592035701 592036149 1.600000e-98 370
19 TraesCS5B01G402700 chr5A 92.946 241 17 0 292 532 524008682 524008442 5.810000e-93 351
20 TraesCS5B01G402700 chr5A 95.897 195 7 1 735 928 591994496 591994302 7.630000e-82 315
21 TraesCS5B01G402700 chr5A 96.629 89 3 0 632 720 591994570 591994482 8.180000e-32 148
22 TraesCS5B01G402700 chr5A 95.181 83 2 1 54 134 592030597 592030515 2.960000e-26 130
23 TraesCS5B01G402700 chr6A 84.633 859 106 10 2819 3655 431198240 431199094 0.000000e+00 832
24 TraesCS5B01G402700 chr6A 82.012 845 126 12 2822 3643 228532663 228533504 0.000000e+00 695
25 TraesCS5B01G402700 chr3D 82.403 824 116 13 2854 3655 554813126 554813942 0.000000e+00 691
26 TraesCS5B01G402700 chr3D 81.154 780 121 10 2895 3651 1728123 1728899 1.450000e-168 603
27 TraesCS5B01G402700 chr4B 79.322 856 143 21 2827 3654 184858081 184858930 1.470000e-158 569
28 TraesCS5B01G402700 chr4B 77.189 434 89 10 2134 2562 658978365 658978793 1.010000e-60 244
29 TraesCS5B01G402700 chr6D 77.506 858 156 16 2822 3655 24756217 24755373 7.100000e-132 481
30 TraesCS5B01G402700 chr2D 80.538 632 98 11 3045 3655 153364586 153363959 2.570000e-126 462
31 TraesCS5B01G402700 chr1B 84.699 366 54 2 3291 3655 563560769 563560405 7.470000e-97 364
32 TraesCS5B01G402700 chr2B 93.776 241 15 0 292 532 142654827 142654587 2.680000e-96 363
33 TraesCS5B01G402700 chr2B 88.393 112 6 4 610 720 169770279 169770174 1.070000e-25 128
34 TraesCS5B01G402700 chr7D 93.361 241 16 0 292 532 82851436 82851196 1.250000e-94 357
35 TraesCS5B01G402700 chr2A 93.361 241 16 0 292 532 434580264 434580024 1.250000e-94 357
36 TraesCS5B01G402700 chr7B 93.004 243 17 0 290 532 731129530 731129288 4.490000e-94 355
37 TraesCS5B01G402700 chr3B 92.946 241 17 0 292 532 745226421 745226181 5.810000e-93 351
38 TraesCS5B01G402700 chr3B 92.946 241 17 0 292 532 820354772 820355012 5.810000e-93 351
39 TraesCS5B01G402700 chr1A 85.990 207 26 2 1209 1413 137795117 137795322 6.150000e-53 219
40 TraesCS5B01G402700 chr6B 86.607 112 8 4 610 720 646204116 646204221 2.310000e-22 117


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G402700 chr5B 579404106 579407763 3657 True 6756.00 6756 100.00000 1 3658 1 chr5B.!!$R3 3657
1 TraesCS5B01G402700 chr5B 579102514 579103020 506 True 747.00 747 93.49100 2002 2501 1 chr5B.!!$R2 499
2 TraesCS5B01G402700 chr5B 579521524 579522030 506 False 388.00 388 80.51200 2056 2562 1 chr5B.!!$F2 506
3 TraesCS5B01G402700 chr5D 472464166 472468233 4067 True 1029.25 2935 89.10850 558 3649 4 chr5D.!!$R3 3091
4 TraesCS5B01G402700 chr5D 472568634 472571135 2501 False 563.00 682 81.22250 1109 2616 2 chr5D.!!$F2 1507
5 TraesCS5B01G402700 chr5D 472520501 472522567 2066 False 523.00 643 81.79000 1109 2534 2 chr5D.!!$F1 1425
6 TraesCS5B01G402700 chr5A 591991221 591994570 3349 True 1035.50 2702 92.93775 632 3655 4 chr5A.!!$R3 3023
7 TraesCS5B01G402700 chr5A 592034145 592036149 2004 False 491.00 612 80.85000 1105 2534 2 chr5A.!!$F1 1429
8 TraesCS5B01G402700 chr6A 431198240 431199094 854 False 832.00 832 84.63300 2819 3655 1 chr6A.!!$F2 836
9 TraesCS5B01G402700 chr6A 228532663 228533504 841 False 695.00 695 82.01200 2822 3643 1 chr6A.!!$F1 821
10 TraesCS5B01G402700 chr3D 554813126 554813942 816 False 691.00 691 82.40300 2854 3655 1 chr3D.!!$F2 801
11 TraesCS5B01G402700 chr3D 1728123 1728899 776 False 603.00 603 81.15400 2895 3651 1 chr3D.!!$F1 756
12 TraesCS5B01G402700 chr4B 184858081 184858930 849 False 569.00 569 79.32200 2827 3654 1 chr4B.!!$F1 827
13 TraesCS5B01G402700 chr6D 24755373 24756217 844 True 481.00 481 77.50600 2822 3655 1 chr6D.!!$R1 833
14 TraesCS5B01G402700 chr2D 153363959 153364586 627 True 462.00 462 80.53800 3045 3655 1 chr2D.!!$R1 610

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
277 278 0.031994 GGCCACAACCACATGTCAAC 59.968 55.0 0.00 0.0 0.00 3.18 F
421 422 0.035152 ATGCGCATTCAGTTGGAGGA 60.035 50.0 19.28 0.0 0.00 3.71 F
510 511 0.107214 TTTTGGAGGCGCTCATAGGG 60.107 55.0 7.64 0.0 31.08 3.53 F
1012 1056 0.110688 CAACGGCATGAACACTGTCG 60.111 55.0 0.00 0.0 46.60 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1920 1979 0.036105 TGCACAGAGCCATGATCGTT 60.036 50.000 0.0 0.0 44.83 3.85 R
2370 3802 0.535102 CTGAACTCCAACGGGTGCTT 60.535 55.000 0.0 0.0 34.93 3.91 R
2496 3928 2.594303 CAGCGTGCCCAGAACCAA 60.594 61.111 0.0 0.0 0.00 3.67 R
2795 4854 0.475044 TCACCTTAACCCCCACACAC 59.525 55.000 0.0 0.0 0.00 3.82 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 8.141268 TCTGACCAAAATTCAGATTACAAAACC 58.859 33.333 0.00 0.00 43.69 3.27
29 30 7.786030 TGACCAAAATTCAGATTACAAAACCA 58.214 30.769 0.00 0.00 0.00 3.67
30 31 8.428063 TGACCAAAATTCAGATTACAAAACCAT 58.572 29.630 0.00 0.00 0.00 3.55
31 32 8.606040 ACCAAAATTCAGATTACAAAACCATG 57.394 30.769 0.00 0.00 0.00 3.66
32 33 7.173047 ACCAAAATTCAGATTACAAAACCATGC 59.827 33.333 0.00 0.00 0.00 4.06
33 34 7.172875 CCAAAATTCAGATTACAAAACCATGCA 59.827 33.333 0.00 0.00 0.00 3.96
34 35 7.656707 AAATTCAGATTACAAAACCATGCAC 57.343 32.000 0.00 0.00 0.00 4.57
35 36 4.782019 TCAGATTACAAAACCATGCACC 57.218 40.909 0.00 0.00 0.00 5.01
36 37 3.509575 TCAGATTACAAAACCATGCACCC 59.490 43.478 0.00 0.00 0.00 4.61
37 38 2.831526 AGATTACAAAACCATGCACCCC 59.168 45.455 0.00 0.00 0.00 4.95
38 39 1.343069 TTACAAAACCATGCACCCCC 58.657 50.000 0.00 0.00 0.00 5.40
39 40 0.485099 TACAAAACCATGCACCCCCT 59.515 50.000 0.00 0.00 0.00 4.79
40 41 0.831711 ACAAAACCATGCACCCCCTC 60.832 55.000 0.00 0.00 0.00 4.30
41 42 1.229177 AAAACCATGCACCCCCTCC 60.229 57.895 0.00 0.00 0.00 4.30
42 43 2.029892 AAAACCATGCACCCCCTCCA 62.030 55.000 0.00 0.00 0.00 3.86
43 44 2.029892 AAACCATGCACCCCCTCCAA 62.030 55.000 0.00 0.00 0.00 3.53
44 45 1.814292 AACCATGCACCCCCTCCAAT 61.814 55.000 0.00 0.00 0.00 3.16
45 46 1.002017 CCATGCACCCCCTCCAATT 59.998 57.895 0.00 0.00 0.00 2.32
46 47 0.618393 CCATGCACCCCCTCCAATTT 60.618 55.000 0.00 0.00 0.00 1.82
47 48 1.278537 CATGCACCCCCTCCAATTTT 58.721 50.000 0.00 0.00 0.00 1.82
48 49 1.629861 CATGCACCCCCTCCAATTTTT 59.370 47.619 0.00 0.00 0.00 1.94
69 70 4.929819 TTTTTGGTAGAAACTGCTTCCC 57.070 40.909 0.00 0.00 34.21 3.97
70 71 2.178912 TTGGTAGAAACTGCTTCCCG 57.821 50.000 0.00 0.00 34.21 5.14
71 72 0.321298 TGGTAGAAACTGCTTCCCGC 60.321 55.000 0.00 0.00 34.21 6.13
72 73 0.036294 GGTAGAAACTGCTTCCCGCT 60.036 55.000 0.00 0.00 40.11 5.52
73 74 1.360820 GTAGAAACTGCTTCCCGCTC 58.639 55.000 0.00 0.00 40.11 5.03
74 75 0.108804 TAGAAACTGCTTCCCGCTCG 60.109 55.000 0.00 0.00 40.11 5.03
75 76 1.668151 GAAACTGCTTCCCGCTCGT 60.668 57.895 0.00 0.00 40.11 4.18
76 77 1.227853 AAACTGCTTCCCGCTCGTT 60.228 52.632 0.00 0.00 40.11 3.85
77 78 0.818040 AAACTGCTTCCCGCTCGTTT 60.818 50.000 0.00 0.00 37.78 3.60
78 79 0.034337 AACTGCTTCCCGCTCGTTTA 59.966 50.000 0.00 0.00 40.11 2.01
79 80 0.249398 ACTGCTTCCCGCTCGTTTAT 59.751 50.000 0.00 0.00 40.11 1.40
80 81 1.338769 ACTGCTTCCCGCTCGTTTATT 60.339 47.619 0.00 0.00 40.11 1.40
81 82 2.093869 ACTGCTTCCCGCTCGTTTATTA 60.094 45.455 0.00 0.00 40.11 0.98
82 83 2.273557 TGCTTCCCGCTCGTTTATTAC 58.726 47.619 0.00 0.00 40.11 1.89
83 84 2.093869 TGCTTCCCGCTCGTTTATTACT 60.094 45.455 0.00 0.00 40.11 2.24
84 85 2.284417 GCTTCCCGCTCGTTTATTACTG 59.716 50.000 0.00 0.00 35.14 2.74
85 86 2.589798 TCCCGCTCGTTTATTACTGG 57.410 50.000 0.00 0.00 0.00 4.00
86 87 1.137479 TCCCGCTCGTTTATTACTGGG 59.863 52.381 0.00 0.00 36.72 4.45
87 88 0.935196 CCGCTCGTTTATTACTGGGC 59.065 55.000 0.00 0.00 0.00 5.36
88 89 0.935196 CGCTCGTTTATTACTGGGCC 59.065 55.000 0.00 0.00 0.00 5.80
89 90 0.935196 GCTCGTTTATTACTGGGCCG 59.065 55.000 0.00 0.00 0.00 6.13
90 91 1.472026 GCTCGTTTATTACTGGGCCGA 60.472 52.381 0.00 0.00 0.00 5.54
91 92 2.805657 GCTCGTTTATTACTGGGCCGAT 60.806 50.000 0.00 0.00 0.00 4.18
92 93 3.057734 CTCGTTTATTACTGGGCCGATC 58.942 50.000 0.00 0.00 0.00 3.69
93 94 2.140717 CGTTTATTACTGGGCCGATCC 58.859 52.381 0.00 0.00 0.00 3.36
94 95 2.484065 CGTTTATTACTGGGCCGATCCA 60.484 50.000 0.00 0.00 36.21 3.41
95 96 3.547746 GTTTATTACTGGGCCGATCCAA 58.452 45.455 0.00 0.00 36.21 3.53
96 97 2.922740 TATTACTGGGCCGATCCAAC 57.077 50.000 0.00 0.00 36.21 3.77
97 98 0.916086 ATTACTGGGCCGATCCAACA 59.084 50.000 0.00 0.00 36.21 3.33
98 99 0.693622 TTACTGGGCCGATCCAACAA 59.306 50.000 0.00 0.00 36.21 2.83
99 100 0.693622 TACTGGGCCGATCCAACAAA 59.306 50.000 0.00 0.00 36.21 2.83
100 101 0.039618 ACTGGGCCGATCCAACAAAT 59.960 50.000 0.00 0.00 36.21 2.32
101 102 1.283613 ACTGGGCCGATCCAACAAATA 59.716 47.619 0.00 0.00 36.21 1.40
102 103 1.949525 CTGGGCCGATCCAACAAATAG 59.050 52.381 0.00 0.00 36.21 1.73
103 104 0.668535 GGGCCGATCCAACAAATAGC 59.331 55.000 0.00 0.00 36.21 2.97
104 105 1.680338 GGCCGATCCAACAAATAGCT 58.320 50.000 0.00 0.00 34.01 3.32
105 106 2.024414 GGCCGATCCAACAAATAGCTT 58.976 47.619 0.00 0.00 34.01 3.74
106 107 2.427095 GGCCGATCCAACAAATAGCTTT 59.573 45.455 0.00 0.00 34.01 3.51
107 108 3.119137 GGCCGATCCAACAAATAGCTTTT 60.119 43.478 0.00 0.00 34.01 2.27
108 109 3.859386 GCCGATCCAACAAATAGCTTTTG 59.141 43.478 15.42 15.42 35.64 2.44
120 121 3.834732 GCTTTTGCGAGTAGGAGGA 57.165 52.632 0.00 0.00 34.86 3.71
121 122 1.646189 GCTTTTGCGAGTAGGAGGAG 58.354 55.000 0.00 0.00 34.86 3.69
122 123 1.646189 CTTTTGCGAGTAGGAGGAGC 58.354 55.000 0.00 0.00 0.00 4.70
123 124 0.973632 TTTTGCGAGTAGGAGGAGCA 59.026 50.000 0.00 0.00 35.90 4.26
124 125 0.246635 TTTGCGAGTAGGAGGAGCAC 59.753 55.000 0.00 0.00 37.57 4.40
125 126 0.612174 TTGCGAGTAGGAGGAGCACT 60.612 55.000 0.00 0.00 37.57 4.40
126 127 1.032657 TGCGAGTAGGAGGAGCACTC 61.033 60.000 0.16 0.16 45.84 3.51
141 142 6.613153 GGAGCACTCCCATATAACTCTATT 57.387 41.667 5.30 0.00 43.94 1.73
142 143 7.010339 GGAGCACTCCCATATAACTCTATTT 57.990 40.000 5.30 0.00 43.94 1.40
143 144 7.454225 GGAGCACTCCCATATAACTCTATTTT 58.546 38.462 5.30 0.00 43.94 1.82
144 145 8.594550 GGAGCACTCCCATATAACTCTATTTTA 58.405 37.037 5.30 0.00 43.94 1.52
261 262 6.721704 AAGATCTATTTGATTTTGGAGGCC 57.278 37.500 0.00 0.00 35.14 5.19
262 263 5.769835 AGATCTATTTGATTTTGGAGGCCA 58.230 37.500 5.01 0.00 35.14 5.36
263 264 5.595952 AGATCTATTTGATTTTGGAGGCCAC 59.404 40.000 5.01 0.00 35.14 5.01
264 265 4.671831 TCTATTTGATTTTGGAGGCCACA 58.328 39.130 5.01 0.00 30.78 4.17
265 266 5.083122 TCTATTTGATTTTGGAGGCCACAA 58.917 37.500 5.01 7.23 30.78 3.33
266 267 3.467374 TTTGATTTTGGAGGCCACAAC 57.533 42.857 5.01 0.00 30.78 3.32
267 268 1.337118 TGATTTTGGAGGCCACAACC 58.663 50.000 5.01 3.18 30.78 3.77
268 269 1.337118 GATTTTGGAGGCCACAACCA 58.663 50.000 5.01 6.17 30.78 3.67
269 270 1.000843 GATTTTGGAGGCCACAACCAC 59.999 52.381 5.01 0.21 30.78 4.16
270 271 0.324738 TTTTGGAGGCCACAACCACA 60.325 50.000 5.01 0.00 30.78 4.17
271 272 0.105760 TTTGGAGGCCACAACCACAT 60.106 50.000 5.01 0.00 30.78 3.21
272 273 0.827089 TTGGAGGCCACAACCACATG 60.827 55.000 5.01 0.00 30.78 3.21
273 274 1.228552 GGAGGCCACAACCACATGT 60.229 57.895 5.01 0.00 0.00 3.21
274 275 1.244019 GGAGGCCACAACCACATGTC 61.244 60.000 5.01 0.00 0.00 3.06
275 276 0.537143 GAGGCCACAACCACATGTCA 60.537 55.000 5.01 0.00 0.00 3.58
276 277 0.106268 AGGCCACAACCACATGTCAA 60.106 50.000 5.01 0.00 0.00 3.18
277 278 0.031994 GGCCACAACCACATGTCAAC 59.968 55.000 0.00 0.00 0.00 3.18
278 279 0.743688 GCCACAACCACATGTCAACA 59.256 50.000 0.00 0.00 0.00 3.33
279 280 1.340889 GCCACAACCACATGTCAACAT 59.659 47.619 0.00 0.00 36.96 2.71
280 281 2.607771 GCCACAACCACATGTCAACATC 60.608 50.000 0.00 0.00 33.61 3.06
281 282 2.622470 CCACAACCACATGTCAACATCA 59.378 45.455 0.00 0.00 33.61 3.07
282 283 3.067883 CCACAACCACATGTCAACATCAA 59.932 43.478 0.00 0.00 33.61 2.57
283 284 4.441217 CCACAACCACATGTCAACATCAAA 60.441 41.667 0.00 0.00 33.61 2.69
284 285 5.107824 CACAACCACATGTCAACATCAAAA 58.892 37.500 0.00 0.00 33.61 2.44
285 286 5.754406 CACAACCACATGTCAACATCAAAAT 59.246 36.000 0.00 0.00 33.61 1.82
286 287 5.984926 ACAACCACATGTCAACATCAAAATC 59.015 36.000 0.00 0.00 33.61 2.17
287 288 5.138125 ACCACATGTCAACATCAAAATCC 57.862 39.130 0.00 0.00 33.61 3.01
288 289 4.588106 ACCACATGTCAACATCAAAATCCA 59.412 37.500 0.00 0.00 33.61 3.41
289 290 4.925054 CCACATGTCAACATCAAAATCCAC 59.075 41.667 0.00 0.00 33.61 4.02
290 291 5.509332 CCACATGTCAACATCAAAATCCACA 60.509 40.000 0.00 0.00 33.61 4.17
291 292 5.631929 CACATGTCAACATCAAAATCCACAG 59.368 40.000 0.00 0.00 33.61 3.66
292 293 4.241590 TGTCAACATCAAAATCCACAGC 57.758 40.909 0.00 0.00 0.00 4.40
293 294 3.236816 GTCAACATCAAAATCCACAGCG 58.763 45.455 0.00 0.00 0.00 5.18
294 295 3.058293 GTCAACATCAAAATCCACAGCGA 60.058 43.478 0.00 0.00 0.00 4.93
295 296 3.567585 TCAACATCAAAATCCACAGCGAA 59.432 39.130 0.00 0.00 0.00 4.70
296 297 3.559238 ACATCAAAATCCACAGCGAAC 57.441 42.857 0.00 0.00 0.00 3.95
297 298 2.228822 ACATCAAAATCCACAGCGAACC 59.771 45.455 0.00 0.00 0.00 3.62
298 299 1.974265 TCAAAATCCACAGCGAACCA 58.026 45.000 0.00 0.00 0.00 3.67
299 300 2.302260 TCAAAATCCACAGCGAACCAA 58.698 42.857 0.00 0.00 0.00 3.67
300 301 2.034053 TCAAAATCCACAGCGAACCAAC 59.966 45.455 0.00 0.00 0.00 3.77
301 302 0.958822 AAATCCACAGCGAACCAACC 59.041 50.000 0.00 0.00 0.00 3.77
302 303 0.110486 AATCCACAGCGAACCAACCT 59.890 50.000 0.00 0.00 0.00 3.50
303 304 0.606401 ATCCACAGCGAACCAACCTG 60.606 55.000 0.00 0.00 0.00 4.00
304 305 1.525995 CCACAGCGAACCAACCTGT 60.526 57.895 0.00 0.00 40.22 4.00
305 306 1.648720 CACAGCGAACCAACCTGTG 59.351 57.895 5.72 5.72 46.96 3.66
318 319 2.879103 ACCTGTGGTTGGATGGTTAG 57.121 50.000 0.00 0.00 27.29 2.34
319 320 2.344592 ACCTGTGGTTGGATGGTTAGA 58.655 47.619 0.00 0.00 27.29 2.10
320 321 2.305927 ACCTGTGGTTGGATGGTTAGAG 59.694 50.000 0.00 0.00 27.29 2.43
321 322 2.356125 CCTGTGGTTGGATGGTTAGAGG 60.356 54.545 0.00 0.00 0.00 3.69
322 323 1.633432 TGTGGTTGGATGGTTAGAGGG 59.367 52.381 0.00 0.00 0.00 4.30
323 324 1.913419 GTGGTTGGATGGTTAGAGGGA 59.087 52.381 0.00 0.00 0.00 4.20
324 325 1.913419 TGGTTGGATGGTTAGAGGGAC 59.087 52.381 0.00 0.00 0.00 4.46
326 327 2.092914 GGTTGGATGGTTAGAGGGACTG 60.093 54.545 0.00 0.00 41.55 3.51
327 328 2.572104 GTTGGATGGTTAGAGGGACTGT 59.428 50.000 0.00 0.00 41.55 3.55
328 329 2.187958 TGGATGGTTAGAGGGACTGTG 58.812 52.381 0.00 0.00 41.55 3.66
329 330 1.486726 GGATGGTTAGAGGGACTGTGG 59.513 57.143 0.00 0.00 41.55 4.17
330 331 2.188817 GATGGTTAGAGGGACTGTGGT 58.811 52.381 0.00 0.00 41.55 4.16
331 332 3.371965 GATGGTTAGAGGGACTGTGGTA 58.628 50.000 0.00 0.00 41.55 3.25
332 333 3.484953 TGGTTAGAGGGACTGTGGTAT 57.515 47.619 0.00 0.00 41.55 2.73
333 334 3.371965 TGGTTAGAGGGACTGTGGTATC 58.628 50.000 0.00 0.00 41.55 2.24
334 335 2.699321 GGTTAGAGGGACTGTGGTATCC 59.301 54.545 0.00 0.00 41.55 2.59
339 340 1.527370 GGACTGTGGTATCCCCAGC 59.473 63.158 0.00 0.00 46.45 4.85
340 341 1.527370 GACTGTGGTATCCCCAGCC 59.473 63.158 0.00 0.00 46.45 4.85
341 342 1.984288 GACTGTGGTATCCCCAGCCC 61.984 65.000 0.00 0.00 46.45 5.19
342 343 2.000701 CTGTGGTATCCCCAGCCCA 61.001 63.158 0.00 0.00 46.45 5.36
343 344 2.270874 CTGTGGTATCCCCAGCCCAC 62.271 65.000 0.00 0.00 46.45 4.61
344 345 2.694616 TGGTATCCCCAGCCCACC 60.695 66.667 0.00 0.00 38.72 4.61
345 346 2.694616 GGTATCCCCAGCCCACCA 60.695 66.667 0.00 0.00 0.00 4.17
346 347 2.757124 GGTATCCCCAGCCCACCAG 61.757 68.421 0.00 0.00 0.00 4.00
347 348 2.368192 TATCCCCAGCCCACCAGG 60.368 66.667 0.00 0.00 39.47 4.45
365 366 3.087370 AGGGTTTAAATCCTGGTGCTC 57.913 47.619 19.53 0.00 38.36 4.26
366 367 1.743394 GGGTTTAAATCCTGGTGCTCG 59.257 52.381 10.45 0.00 0.00 5.03
367 368 1.132453 GGTTTAAATCCTGGTGCTCGC 59.868 52.381 0.00 0.00 0.00 5.03
368 369 1.810151 GTTTAAATCCTGGTGCTCGCA 59.190 47.619 0.00 0.00 0.00 5.10
369 370 2.418368 TTAAATCCTGGTGCTCGCAT 57.582 45.000 0.00 0.00 0.00 4.73
370 371 2.418368 TAAATCCTGGTGCTCGCATT 57.582 45.000 0.00 0.00 0.00 3.56
371 372 1.549203 AAATCCTGGTGCTCGCATTT 58.451 45.000 0.00 0.00 0.00 2.32
372 373 2.418368 AATCCTGGTGCTCGCATTTA 57.582 45.000 0.00 0.00 0.00 1.40
373 374 2.645838 ATCCTGGTGCTCGCATTTAT 57.354 45.000 0.00 0.00 0.00 1.40
374 375 2.418368 TCCTGGTGCTCGCATTTATT 57.582 45.000 0.00 0.00 0.00 1.40
375 376 2.288666 TCCTGGTGCTCGCATTTATTC 58.711 47.619 0.00 0.00 0.00 1.75
376 377 1.334869 CCTGGTGCTCGCATTTATTCC 59.665 52.381 0.00 0.00 0.00 3.01
377 378 2.292267 CTGGTGCTCGCATTTATTCCT 58.708 47.619 0.00 0.00 0.00 3.36
378 379 2.016318 TGGTGCTCGCATTTATTCCTG 58.984 47.619 0.00 0.00 0.00 3.86
379 380 1.334869 GGTGCTCGCATTTATTCCTGG 59.665 52.381 0.00 0.00 0.00 4.45
380 381 2.288666 GTGCTCGCATTTATTCCTGGA 58.711 47.619 0.00 0.00 0.00 3.86
381 382 2.880890 GTGCTCGCATTTATTCCTGGAT 59.119 45.455 0.00 0.00 0.00 3.41
382 383 3.316308 GTGCTCGCATTTATTCCTGGATT 59.684 43.478 0.00 0.00 0.00 3.01
383 384 3.953612 TGCTCGCATTTATTCCTGGATTT 59.046 39.130 0.00 0.00 0.00 2.17
384 385 5.008613 GTGCTCGCATTTATTCCTGGATTTA 59.991 40.000 0.00 0.00 0.00 1.40
385 386 5.769662 TGCTCGCATTTATTCCTGGATTTAT 59.230 36.000 0.00 0.00 0.00 1.40
386 387 6.265196 TGCTCGCATTTATTCCTGGATTTATT 59.735 34.615 0.00 0.00 0.00 1.40
387 388 7.147976 GCTCGCATTTATTCCTGGATTTATTT 58.852 34.615 0.00 0.00 0.00 1.40
388 389 7.653311 GCTCGCATTTATTCCTGGATTTATTTT 59.347 33.333 0.00 0.00 0.00 1.82
391 392 9.410556 CGCATTTATTCCTGGATTTATTTTAGG 57.589 33.333 0.00 0.00 0.00 2.69
398 399 7.817418 TCCTGGATTTATTTTAGGATTTCGG 57.183 36.000 0.00 0.00 32.85 4.30
399 400 6.775629 TCCTGGATTTATTTTAGGATTTCGGG 59.224 38.462 0.00 0.00 32.85 5.14
400 401 6.399639 TGGATTTATTTTAGGATTTCGGGC 57.600 37.500 0.00 0.00 0.00 6.13
401 402 5.894393 TGGATTTATTTTAGGATTTCGGGCA 59.106 36.000 0.00 0.00 0.00 5.36
402 403 6.381420 TGGATTTATTTTAGGATTTCGGGCAA 59.619 34.615 0.00 0.00 0.00 4.52
403 404 7.070571 TGGATTTATTTTAGGATTTCGGGCAAT 59.929 33.333 0.00 0.00 0.00 3.56
404 405 7.384932 GGATTTATTTTAGGATTTCGGGCAATG 59.615 37.037 0.00 0.00 0.00 2.82
405 406 3.518634 TTTTAGGATTTCGGGCAATGC 57.481 42.857 0.00 0.00 0.00 3.56
406 407 1.021202 TTAGGATTTCGGGCAATGCG 58.979 50.000 0.00 0.00 30.14 4.73
407 408 1.444119 TAGGATTTCGGGCAATGCGC 61.444 55.000 12.54 12.54 41.28 6.09
408 409 2.489285 GATTTCGGGCAATGCGCA 59.511 55.556 21.79 14.96 45.17 6.09
409 410 1.066257 GATTTCGGGCAATGCGCAT 59.934 52.632 19.28 19.28 45.17 4.73
410 411 0.528249 GATTTCGGGCAATGCGCATT 60.528 50.000 29.36 29.36 45.17 3.56
411 412 0.528249 ATTTCGGGCAATGCGCATTC 60.528 50.000 31.88 23.96 45.17 2.67
412 413 1.871126 TTTCGGGCAATGCGCATTCA 61.871 50.000 31.88 11.35 45.17 2.57
413 414 2.268988 TTCGGGCAATGCGCATTCAG 62.269 55.000 31.88 22.37 45.17 3.02
414 415 2.887360 GGGCAATGCGCATTCAGT 59.113 55.556 31.88 9.84 45.17 3.41
415 416 1.216178 GGGCAATGCGCATTCAGTT 59.784 52.632 31.88 10.28 45.17 3.16
416 417 1.079875 GGGCAATGCGCATTCAGTTG 61.080 55.000 31.88 22.67 45.17 3.16
417 418 1.079875 GGCAATGCGCATTCAGTTGG 61.080 55.000 31.88 20.24 45.17 3.77
418 419 0.109179 GCAATGCGCATTCAGTTGGA 60.109 50.000 31.88 0.00 41.79 3.53
419 420 1.904144 CAATGCGCATTCAGTTGGAG 58.096 50.000 31.88 14.87 0.00 3.86
420 421 0.813184 AATGCGCATTCAGTTGGAGG 59.187 50.000 29.36 0.00 0.00 4.30
421 422 0.035152 ATGCGCATTCAGTTGGAGGA 60.035 50.000 19.28 0.00 0.00 3.71
422 423 0.674581 TGCGCATTCAGTTGGAGGAG 60.675 55.000 5.66 0.00 0.00 3.69
423 424 0.391661 GCGCATTCAGTTGGAGGAGA 60.392 55.000 0.30 0.00 0.00 3.71
424 425 1.363744 CGCATTCAGTTGGAGGAGAC 58.636 55.000 0.00 0.00 0.00 3.36
425 426 1.363744 GCATTCAGTTGGAGGAGACG 58.636 55.000 0.00 0.00 0.00 4.18
426 427 1.338200 GCATTCAGTTGGAGGAGACGT 60.338 52.381 0.00 0.00 0.00 4.34
427 428 2.872038 GCATTCAGTTGGAGGAGACGTT 60.872 50.000 0.00 0.00 0.00 3.99
428 429 2.814280 TTCAGTTGGAGGAGACGTTC 57.186 50.000 0.00 0.00 0.00 3.95
449 450 4.526770 TCGATGACGAGACGCCTA 57.473 55.556 0.00 0.00 43.81 3.93
450 451 2.012237 TCGATGACGAGACGCCTAC 58.988 57.895 0.00 0.00 43.81 3.18
451 452 1.367782 CGATGACGAGACGCCTACG 60.368 63.158 0.00 0.00 43.40 3.51
452 453 1.009900 GATGACGAGACGCCTACGG 60.010 63.158 0.00 0.00 46.04 4.02
453 454 1.712977 GATGACGAGACGCCTACGGT 61.713 60.000 0.00 0.00 46.04 4.83
454 455 1.989966 ATGACGAGACGCCTACGGTG 61.990 60.000 0.00 0.00 46.04 4.94
455 456 3.392595 GACGAGACGCCTACGGTGG 62.393 68.421 0.00 0.00 46.04 4.61
464 465 3.818586 CCTACGGTGGCTTCGTAAA 57.181 52.632 12.25 0.00 41.62 2.01
465 466 2.304751 CCTACGGTGGCTTCGTAAAT 57.695 50.000 12.25 0.00 41.62 1.40
466 467 2.199236 CCTACGGTGGCTTCGTAAATC 58.801 52.381 12.25 0.00 41.62 2.17
467 468 2.159142 CCTACGGTGGCTTCGTAAATCT 60.159 50.000 12.25 0.00 41.62 2.40
468 469 2.005971 ACGGTGGCTTCGTAAATCTC 57.994 50.000 4.10 0.00 39.22 2.75
469 470 1.274167 ACGGTGGCTTCGTAAATCTCA 59.726 47.619 4.10 0.00 39.22 3.27
470 471 2.289195 ACGGTGGCTTCGTAAATCTCAA 60.289 45.455 4.10 0.00 39.22 3.02
471 472 2.348666 CGGTGGCTTCGTAAATCTCAAG 59.651 50.000 0.00 0.00 0.00 3.02
472 473 3.596214 GGTGGCTTCGTAAATCTCAAGA 58.404 45.455 0.00 0.00 0.00 3.02
473 474 4.192317 GGTGGCTTCGTAAATCTCAAGAT 58.808 43.478 0.00 0.00 36.07 2.40
474 475 4.034510 GGTGGCTTCGTAAATCTCAAGATG 59.965 45.833 0.00 0.00 34.49 2.90
475 476 4.870426 GTGGCTTCGTAAATCTCAAGATGA 59.130 41.667 0.00 0.00 34.49 2.92
476 477 5.525378 GTGGCTTCGTAAATCTCAAGATGAT 59.475 40.000 0.00 0.00 34.49 2.45
477 478 6.701841 GTGGCTTCGTAAATCTCAAGATGATA 59.298 38.462 0.00 0.00 34.49 2.15
478 479 7.386299 GTGGCTTCGTAAATCTCAAGATGATAT 59.614 37.037 0.00 0.00 34.49 1.63
479 480 7.386025 TGGCTTCGTAAATCTCAAGATGATATG 59.614 37.037 0.00 0.00 34.49 1.78
480 481 7.232994 GCTTCGTAAATCTCAAGATGATATGC 58.767 38.462 0.00 0.00 34.49 3.14
481 482 7.623089 GCTTCGTAAATCTCAAGATGATATGCC 60.623 40.741 0.00 0.00 34.49 4.40
482 483 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
483 484 5.062683 CGTAAATCTCAAGATGATATGCCGG 59.937 44.000 0.00 0.00 34.49 6.13
484 485 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
485 486 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
486 487 2.028658 TCTCAAGATGATATGCCGGCTC 60.029 50.000 29.70 17.89 0.00 4.70
487 488 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
488 489 2.104622 TCAAGATGATATGCCGGCTCAA 59.895 45.455 29.70 13.42 0.00 3.02
489 490 3.079578 CAAGATGATATGCCGGCTCAAT 58.920 45.455 29.70 17.87 0.00 2.57
490 491 2.983229 AGATGATATGCCGGCTCAATC 58.017 47.619 29.70 24.84 0.00 2.67
491 492 2.570752 AGATGATATGCCGGCTCAATCT 59.429 45.455 29.70 22.78 0.00 2.40
492 493 2.936919 TGATATGCCGGCTCAATCTT 57.063 45.000 29.70 4.14 0.00 2.40
493 494 3.213206 TGATATGCCGGCTCAATCTTT 57.787 42.857 29.70 3.35 0.00 2.52
494 495 3.554934 TGATATGCCGGCTCAATCTTTT 58.445 40.909 29.70 1.60 0.00 2.27
495 496 3.316029 TGATATGCCGGCTCAATCTTTTG 59.684 43.478 29.70 0.00 0.00 2.44
496 497 0.819582 ATGCCGGCTCAATCTTTTGG 59.180 50.000 29.70 0.00 33.44 3.28
497 498 0.251121 TGCCGGCTCAATCTTTTGGA 60.251 50.000 29.70 0.00 33.44 3.53
498 499 0.453390 GCCGGCTCAATCTTTTGGAG 59.547 55.000 22.15 0.00 33.44 3.86
499 500 1.098050 CCGGCTCAATCTTTTGGAGG 58.902 55.000 0.00 0.00 33.44 4.30
500 501 0.453390 CGGCTCAATCTTTTGGAGGC 59.547 55.000 0.00 0.00 34.85 4.70
501 502 0.453390 GGCTCAATCTTTTGGAGGCG 59.547 55.000 0.00 0.00 33.44 5.52
502 503 0.179153 GCTCAATCTTTTGGAGGCGC 60.179 55.000 0.00 0.00 33.44 6.53
503 504 1.457346 CTCAATCTTTTGGAGGCGCT 58.543 50.000 7.64 0.00 33.44 5.92
504 505 1.399791 CTCAATCTTTTGGAGGCGCTC 59.600 52.381 7.64 2.45 33.44 5.03
505 506 1.167851 CAATCTTTTGGAGGCGCTCA 58.832 50.000 7.64 0.28 31.08 4.26
506 507 1.747355 CAATCTTTTGGAGGCGCTCAT 59.253 47.619 7.64 0.00 31.08 2.90
507 508 2.945008 CAATCTTTTGGAGGCGCTCATA 59.055 45.455 7.64 0.00 31.08 2.15
508 509 2.315925 TCTTTTGGAGGCGCTCATAG 57.684 50.000 7.64 5.07 31.08 2.23
509 510 1.134401 TCTTTTGGAGGCGCTCATAGG 60.134 52.381 7.64 0.14 31.08 2.57
510 511 0.107214 TTTTGGAGGCGCTCATAGGG 60.107 55.000 7.64 0.00 31.08 3.53
511 512 1.271840 TTTGGAGGCGCTCATAGGGT 61.272 55.000 7.64 0.00 31.08 4.34
512 513 1.271840 TTGGAGGCGCTCATAGGGTT 61.272 55.000 7.64 0.00 31.08 4.11
513 514 0.397957 TGGAGGCGCTCATAGGGTTA 60.398 55.000 7.64 0.00 31.08 2.85
514 515 0.318762 GGAGGCGCTCATAGGGTTAG 59.681 60.000 7.64 0.00 31.08 2.34
515 516 0.318762 GAGGCGCTCATAGGGTTAGG 59.681 60.000 7.64 0.00 0.00 2.69
516 517 1.301795 GGCGCTCATAGGGTTAGGC 60.302 63.158 7.64 0.00 0.00 3.93
517 518 1.749033 GCGCTCATAGGGTTAGGCT 59.251 57.895 0.00 0.00 0.00 4.58
518 519 0.601311 GCGCTCATAGGGTTAGGCTG 60.601 60.000 0.00 0.00 0.00 4.85
519 520 0.753262 CGCTCATAGGGTTAGGCTGT 59.247 55.000 0.00 0.00 0.00 4.40
520 521 1.539065 CGCTCATAGGGTTAGGCTGTG 60.539 57.143 0.00 0.00 0.00 3.66
521 522 1.811941 GCTCATAGGGTTAGGCTGTGC 60.812 57.143 0.00 0.00 0.00 4.57
522 523 0.464036 TCATAGGGTTAGGCTGTGCG 59.536 55.000 0.00 0.00 0.00 5.34
523 524 0.178068 CATAGGGTTAGGCTGTGCGT 59.822 55.000 0.00 0.00 0.00 5.24
524 525 0.178068 ATAGGGTTAGGCTGTGCGTG 59.822 55.000 0.00 0.00 0.00 5.34
525 526 1.189524 TAGGGTTAGGCTGTGCGTGT 61.190 55.000 0.00 0.00 0.00 4.49
526 527 2.325082 GGGTTAGGCTGTGCGTGTG 61.325 63.158 0.00 0.00 0.00 3.82
527 528 2.556287 GTTAGGCTGTGCGTGTGC 59.444 61.111 0.00 0.00 43.20 4.57
538 539 2.763248 CGTGTGCGCGTCTGTAAG 59.237 61.111 8.43 0.00 0.00 2.34
539 540 1.728074 CGTGTGCGCGTCTGTAAGA 60.728 57.895 8.43 0.00 43.69 2.10
556 557 7.920738 TCTGTAAGAAAGAAAAGCTGAAGAAC 58.079 34.615 0.00 0.00 42.31 3.01
561 562 2.868899 AGAAAAGCTGAAGAACCCCTG 58.131 47.619 0.00 0.00 0.00 4.45
566 567 3.356529 AGCTGAAGAACCCCTGTATTG 57.643 47.619 0.00 0.00 0.00 1.90
587 588 4.359105 TGTTAAGACCAGCCCAGTAGTAT 58.641 43.478 0.00 0.00 0.00 2.12
598 601 1.964223 CCAGTAGTATCCGCATGTCCT 59.036 52.381 0.00 0.00 0.00 3.85
599 602 2.365617 CCAGTAGTATCCGCATGTCCTT 59.634 50.000 0.00 0.00 0.00 3.36
602 605 4.982916 CAGTAGTATCCGCATGTCCTTAAC 59.017 45.833 0.00 0.00 0.00 2.01
604 607 4.060038 AGTATCCGCATGTCCTTAACAG 57.940 45.455 0.00 0.00 42.37 3.16
605 608 3.451178 AGTATCCGCATGTCCTTAACAGT 59.549 43.478 0.00 0.00 42.37 3.55
608 614 2.829720 TCCGCATGTCCTTAACAGTAGT 59.170 45.455 0.00 0.00 42.37 2.73
616 622 7.275123 GCATGTCCTTAACAGTAGTAGTACAAC 59.725 40.741 10.33 0.00 42.37 3.32
625 631 5.407387 ACAGTAGTAGTACAACCGCAATTTG 59.593 40.000 10.33 0.00 0.00 2.32
678 684 1.802960 CGATGATCCCAAGCACATAGC 59.197 52.381 0.00 0.00 46.19 2.97
709 715 3.840124 AAGTTTCTCCTCGTTTGTCCT 57.160 42.857 0.00 0.00 0.00 3.85
710 716 3.113260 AGTTTCTCCTCGTTTGTCCTG 57.887 47.619 0.00 0.00 0.00 3.86
711 717 2.143925 GTTTCTCCTCGTTTGTCCTGG 58.856 52.381 0.00 0.00 0.00 4.45
712 718 0.685097 TTCTCCTCGTTTGTCCTGGG 59.315 55.000 0.00 0.00 0.00 4.45
713 719 1.376037 CTCCTCGTTTGTCCTGGGC 60.376 63.158 0.00 0.00 0.00 5.36
714 720 1.831652 CTCCTCGTTTGTCCTGGGCT 61.832 60.000 0.00 0.00 0.00 5.19
715 721 0.543410 TCCTCGTTTGTCCTGGGCTA 60.543 55.000 0.00 0.00 0.00 3.93
716 722 0.391263 CCTCGTTTGTCCTGGGCTAC 60.391 60.000 0.00 0.00 0.00 3.58
717 723 0.736325 CTCGTTTGTCCTGGGCTACG 60.736 60.000 16.64 16.64 0.00 3.51
718 724 1.005394 CGTTTGTCCTGGGCTACGT 60.005 57.895 15.18 0.00 0.00 3.57
719 725 0.601841 CGTTTGTCCTGGGCTACGTT 60.602 55.000 15.18 0.00 0.00 3.99
720 726 1.601166 GTTTGTCCTGGGCTACGTTT 58.399 50.000 0.00 0.00 0.00 3.60
721 727 1.951602 GTTTGTCCTGGGCTACGTTTT 59.048 47.619 0.00 0.00 0.00 2.43
722 728 2.351706 TTGTCCTGGGCTACGTTTTT 57.648 45.000 0.00 0.00 0.00 1.94
755 761 3.433173 GGTCCTGGGCTACGTTAATTGAT 60.433 47.826 0.00 0.00 0.00 2.57
756 762 3.808174 GTCCTGGGCTACGTTAATTGATC 59.192 47.826 0.00 0.00 0.00 2.92
800 807 2.310538 GTTAGGATGGGAATGCCTTGG 58.689 52.381 0.00 0.00 33.28 3.61
906 913 3.063045 GGCTTCGTATCCAAAACTTACGG 59.937 47.826 0.00 0.00 35.19 4.02
925 969 3.262420 CGGGCCAAATTATATCGAGGAG 58.738 50.000 4.39 0.00 0.00 3.69
965 1009 1.270094 ACAAGCCACTGAATCGAACGA 60.270 47.619 0.00 0.00 0.00 3.85
1012 1056 0.110688 CAACGGCATGAACACTGTCG 60.111 55.000 0.00 0.00 46.60 4.35
1053 1097 2.151202 GCCCTTTTCGTCTTCATCACA 58.849 47.619 0.00 0.00 0.00 3.58
1311 1358 2.181021 GACGTCACCTTCGCCGAT 59.819 61.111 11.55 0.00 0.00 4.18
1545 1598 2.669569 GCGCTGGTGGAGCTCAAA 60.670 61.111 17.19 0.00 46.64 2.69
1668 1721 1.609320 GCACAGGAGTTCAAGGAGTCC 60.609 57.143 0.00 0.00 39.08 3.85
1740 1793 1.217244 GGTGCTACGGTGGTTCGAT 59.783 57.895 0.00 0.00 0.00 3.59
1776 1829 2.034879 CAAGATCGTGGCTGCGGTT 61.035 57.895 0.02 0.00 0.00 4.44
1798 1851 3.379445 GGAGGGACGCGTTCCTGA 61.379 66.667 43.05 0.00 45.09 3.86
1915 1974 0.180642 AGAGCCGGAGATCTACACGA 59.819 55.000 5.05 0.00 0.00 4.35
1920 1979 2.673043 GCCGGAGATCTACACGAACAAA 60.673 50.000 5.05 0.00 0.00 2.83
1922 1981 3.367025 CCGGAGATCTACACGAACAAAAC 59.633 47.826 5.61 0.00 0.00 2.43
1945 2004 1.491754 TCATGGCTCTGTGCATGGTAT 59.508 47.619 3.96 0.00 45.15 2.73
1964 2603 2.659016 CGCTTCCAGCTCACTCCA 59.341 61.111 0.00 0.00 39.60 3.86
1983 2625 5.596361 ACTCCATATCGTCTTTCACTCTCAT 59.404 40.000 0.00 0.00 0.00 2.90
2217 3649 3.417275 CTCGGCTACCTCCACTGCG 62.417 68.421 0.00 0.00 0.00 5.18
2370 3802 2.692368 GGGACCCTGAGGCATGGA 60.692 66.667 2.09 0.00 36.11 3.41
2666 4098 4.394712 GGACTGTGACCGCTGGGG 62.395 72.222 9.49 9.49 43.62 4.96
2731 4424 0.398696 TTTCCTCCAGCACGCCTTAA 59.601 50.000 0.00 0.00 0.00 1.85
2820 4906 3.023832 GTGGGGGTTAAGGTGAATGATG 58.976 50.000 0.00 0.00 0.00 3.07
2889 4976 5.347620 AGTTACGGATATGTTGGCAGTTA 57.652 39.130 0.00 0.00 0.00 2.24
2892 4979 6.482308 AGTTACGGATATGTTGGCAGTTATTC 59.518 38.462 0.00 0.00 0.00 1.75
2954 5041 1.818555 GCATCTTTGTGGATGGGGC 59.181 57.895 6.60 0.00 42.21 5.80
2976 5063 4.565166 GCAGTGTTCATACTACAATACGCA 59.435 41.667 0.00 0.00 0.00 5.24
2996 5103 5.585844 ACGCAGATGACACATATTTTCATGA 59.414 36.000 0.00 0.00 29.93 3.07
3001 5108 9.069078 CAGATGACACATATTTTCATGAAACAC 57.931 33.333 20.35 7.65 29.93 3.32
3007 5114 8.134895 ACACATATTTTCATGAAACACGTTCTT 58.865 29.630 20.35 0.00 37.13 2.52
3014 5121 5.164233 TCATGAAACACGTTCTTGCAAAAA 58.836 33.333 0.00 0.00 39.89 1.94
3015 5122 5.288232 TCATGAAACACGTTCTTGCAAAAAG 59.712 36.000 0.00 3.47 39.89 2.27
3135 5244 4.273148 AGGAACAAGACGCTTACAGATT 57.727 40.909 0.00 0.00 0.00 2.40
3181 5290 3.052338 CCCTACCTTCCAGTTACCTAGGA 60.052 52.174 17.98 0.00 0.00 2.94
3185 5294 6.494146 CCTACCTTCCAGTTACCTAGGAATAG 59.506 46.154 17.98 0.81 40.39 1.73
3324 5456 4.811555 TTGTCGATGTTCCTCTTGTTTG 57.188 40.909 0.00 0.00 0.00 2.93
3345 5477 8.607713 TGTTTGTCTTTGAAATACCTATAGGGA 58.392 33.333 22.91 15.67 40.27 4.20
3629 6337 4.130118 GACCTAATGATTCGCCATTCTGT 58.870 43.478 0.00 0.00 37.81 3.41
3644 6352 5.631481 GCCATTCTGTAAGGGGTTAATGAGA 60.631 44.000 0.00 0.00 37.03 3.27
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
3 4 7.925483 TGGTTTTGTAATCTGAATTTTGGTCAG 59.075 33.333 0.00 0.00 43.28 3.51
4 5 7.786030 TGGTTTTGTAATCTGAATTTTGGTCA 58.214 30.769 0.00 0.00 0.00 4.02
5 6 8.711457 CATGGTTTTGTAATCTGAATTTTGGTC 58.289 33.333 0.00 0.00 0.00 4.02
6 7 7.173047 GCATGGTTTTGTAATCTGAATTTTGGT 59.827 33.333 0.00 0.00 0.00 3.67
7 8 7.172875 TGCATGGTTTTGTAATCTGAATTTTGG 59.827 33.333 0.00 0.00 0.00 3.28
8 9 8.011106 GTGCATGGTTTTGTAATCTGAATTTTG 58.989 33.333 0.00 0.00 0.00 2.44
9 10 7.173047 GGTGCATGGTTTTGTAATCTGAATTTT 59.827 33.333 0.00 0.00 0.00 1.82
10 11 6.650390 GGTGCATGGTTTTGTAATCTGAATTT 59.350 34.615 0.00 0.00 0.00 1.82
11 12 6.165577 GGTGCATGGTTTTGTAATCTGAATT 58.834 36.000 0.00 0.00 0.00 2.17
12 13 5.337491 GGGTGCATGGTTTTGTAATCTGAAT 60.337 40.000 0.00 0.00 0.00 2.57
13 14 4.021544 GGGTGCATGGTTTTGTAATCTGAA 60.022 41.667 0.00 0.00 0.00 3.02
14 15 3.509575 GGGTGCATGGTTTTGTAATCTGA 59.490 43.478 0.00 0.00 0.00 3.27
15 16 3.368323 GGGGTGCATGGTTTTGTAATCTG 60.368 47.826 0.00 0.00 0.00 2.90
16 17 2.831526 GGGGTGCATGGTTTTGTAATCT 59.168 45.455 0.00 0.00 0.00 2.40
17 18 2.093711 GGGGGTGCATGGTTTTGTAATC 60.094 50.000 0.00 0.00 0.00 1.75
18 19 1.905894 GGGGGTGCATGGTTTTGTAAT 59.094 47.619 0.00 0.00 0.00 1.89
19 20 1.133009 AGGGGGTGCATGGTTTTGTAA 60.133 47.619 0.00 0.00 0.00 2.41
20 21 0.485099 AGGGGGTGCATGGTTTTGTA 59.515 50.000 0.00 0.00 0.00 2.41
21 22 0.831711 GAGGGGGTGCATGGTTTTGT 60.832 55.000 0.00 0.00 0.00 2.83
22 23 1.543944 GGAGGGGGTGCATGGTTTTG 61.544 60.000 0.00 0.00 0.00 2.44
23 24 1.229177 GGAGGGGGTGCATGGTTTT 60.229 57.895 0.00 0.00 0.00 2.43
24 25 2.029892 TTGGAGGGGGTGCATGGTTT 62.030 55.000 0.00 0.00 0.00 3.27
25 26 1.814292 ATTGGAGGGGGTGCATGGTT 61.814 55.000 0.00 0.00 0.00 3.67
26 27 1.814292 AATTGGAGGGGGTGCATGGT 61.814 55.000 0.00 0.00 0.00 3.55
27 28 0.618393 AAATTGGAGGGGGTGCATGG 60.618 55.000 0.00 0.00 0.00 3.66
28 29 1.278537 AAAATTGGAGGGGGTGCATG 58.721 50.000 0.00 0.00 0.00 4.06
29 30 2.043307 AAAAATTGGAGGGGGTGCAT 57.957 45.000 0.00 0.00 0.00 3.96
30 31 3.567902 AAAAATTGGAGGGGGTGCA 57.432 47.368 0.00 0.00 0.00 4.57
48 49 3.316868 CGGGAAGCAGTTTCTACCAAAAA 59.683 43.478 0.00 0.00 36.03 1.94
49 50 2.882137 CGGGAAGCAGTTTCTACCAAAA 59.118 45.455 0.00 0.00 36.03 2.44
50 51 2.500229 CGGGAAGCAGTTTCTACCAAA 58.500 47.619 0.00 0.00 36.03 3.28
51 52 2.178912 CGGGAAGCAGTTTCTACCAA 57.821 50.000 0.00 0.00 36.03 3.67
52 53 3.927555 CGGGAAGCAGTTTCTACCA 57.072 52.632 0.00 0.00 36.03 3.25
64 65 2.864343 CCAGTAATAAACGAGCGGGAAG 59.136 50.000 0.00 0.00 0.00 3.46
65 66 2.419021 CCCAGTAATAAACGAGCGGGAA 60.419 50.000 0.00 0.00 32.80 3.97
66 67 1.137479 CCCAGTAATAAACGAGCGGGA 59.863 52.381 0.00 0.00 32.80 5.14
67 68 1.578583 CCCAGTAATAAACGAGCGGG 58.421 55.000 0.00 0.00 0.00 6.13
68 69 0.935196 GCCCAGTAATAAACGAGCGG 59.065 55.000 0.00 0.00 0.00 5.52
69 70 0.935196 GGCCCAGTAATAAACGAGCG 59.065 55.000 0.00 0.00 0.00 5.03
70 71 0.935196 CGGCCCAGTAATAAACGAGC 59.065 55.000 0.00 0.00 0.00 5.03
71 72 2.589798 TCGGCCCAGTAATAAACGAG 57.410 50.000 0.00 0.00 0.00 4.18
72 73 2.224113 GGATCGGCCCAGTAATAAACGA 60.224 50.000 0.00 0.00 0.00 3.85
73 74 2.140717 GGATCGGCCCAGTAATAAACG 58.859 52.381 0.00 0.00 0.00 3.60
74 75 3.202829 TGGATCGGCCCAGTAATAAAC 57.797 47.619 0.00 0.00 34.97 2.01
75 76 3.054287 TGTTGGATCGGCCCAGTAATAAA 60.054 43.478 0.00 0.00 37.53 1.40
76 77 2.506231 TGTTGGATCGGCCCAGTAATAA 59.494 45.455 0.00 0.00 37.53 1.40
77 78 2.120312 TGTTGGATCGGCCCAGTAATA 58.880 47.619 0.00 0.00 37.53 0.98
78 79 0.916086 TGTTGGATCGGCCCAGTAAT 59.084 50.000 0.00 0.00 37.53 1.89
79 80 0.693622 TTGTTGGATCGGCCCAGTAA 59.306 50.000 0.00 0.00 37.53 2.24
80 81 0.693622 TTTGTTGGATCGGCCCAGTA 59.306 50.000 0.00 0.00 37.53 2.74
81 82 0.039618 ATTTGTTGGATCGGCCCAGT 59.960 50.000 0.00 0.00 37.53 4.00
82 83 1.949525 CTATTTGTTGGATCGGCCCAG 59.050 52.381 0.00 0.00 37.53 4.45
83 84 2.021723 GCTATTTGTTGGATCGGCCCA 61.022 52.381 0.00 0.00 34.97 5.36
84 85 0.668535 GCTATTTGTTGGATCGGCCC 59.331 55.000 0.00 0.00 34.97 5.80
85 86 1.680338 AGCTATTTGTTGGATCGGCC 58.320 50.000 0.00 0.00 37.10 6.13
86 87 3.782889 AAAGCTATTTGTTGGATCGGC 57.217 42.857 0.00 0.00 0.00 5.54
87 88 3.859386 GCAAAAGCTATTTGTTGGATCGG 59.141 43.478 17.10 0.00 0.00 4.18
88 89 3.543494 CGCAAAAGCTATTTGTTGGATCG 59.457 43.478 17.10 10.40 0.00 3.69
89 90 4.732784 TCGCAAAAGCTATTTGTTGGATC 58.267 39.130 17.10 0.00 0.00 3.36
90 91 4.218417 ACTCGCAAAAGCTATTTGTTGGAT 59.782 37.500 17.10 3.95 0.00 3.41
91 92 3.568007 ACTCGCAAAAGCTATTTGTTGGA 59.432 39.130 17.10 12.78 0.00 3.53
92 93 3.900941 ACTCGCAAAAGCTATTTGTTGG 58.099 40.909 17.10 11.76 0.00 3.77
93 94 5.088739 CCTACTCGCAAAAGCTATTTGTTG 58.911 41.667 17.10 12.41 0.00 3.33
94 95 5.001232 TCCTACTCGCAAAAGCTATTTGTT 58.999 37.500 17.10 0.00 0.00 2.83
95 96 4.575885 TCCTACTCGCAAAAGCTATTTGT 58.424 39.130 17.10 5.79 0.00 2.83
96 97 4.034510 CCTCCTACTCGCAAAAGCTATTTG 59.965 45.833 13.66 13.66 0.00 2.32
97 98 4.081087 TCCTCCTACTCGCAAAAGCTATTT 60.081 41.667 0.00 0.00 0.00 1.40
98 99 3.451178 TCCTCCTACTCGCAAAAGCTATT 59.549 43.478 0.00 0.00 0.00 1.73
99 100 3.031736 TCCTCCTACTCGCAAAAGCTAT 58.968 45.455 0.00 0.00 0.00 2.97
100 101 2.427453 CTCCTCCTACTCGCAAAAGCTA 59.573 50.000 0.00 0.00 0.00 3.32
101 102 1.205893 CTCCTCCTACTCGCAAAAGCT 59.794 52.381 0.00 0.00 0.00 3.74
102 103 1.646189 CTCCTCCTACTCGCAAAAGC 58.354 55.000 0.00 0.00 0.00 3.51
103 104 1.066858 TGCTCCTCCTACTCGCAAAAG 60.067 52.381 0.00 0.00 0.00 2.27
104 105 0.973632 TGCTCCTCCTACTCGCAAAA 59.026 50.000 0.00 0.00 0.00 2.44
105 106 0.246635 GTGCTCCTCCTACTCGCAAA 59.753 55.000 0.00 0.00 31.77 3.68
106 107 0.612174 AGTGCTCCTCCTACTCGCAA 60.612 55.000 0.00 0.00 31.77 4.85
107 108 1.000771 AGTGCTCCTCCTACTCGCA 60.001 57.895 0.00 0.00 0.00 5.10
108 109 1.731093 GAGTGCTCCTCCTACTCGC 59.269 63.158 0.00 0.00 33.79 5.03
235 236 8.043113 GGCCTCCAAAATCAAATAGATCTTTTT 58.957 33.333 0.00 2.41 35.39 1.94
236 237 7.180766 TGGCCTCCAAAATCAAATAGATCTTTT 59.819 33.333 3.32 0.00 35.39 2.27
237 238 6.669154 TGGCCTCCAAAATCAAATAGATCTTT 59.331 34.615 3.32 0.00 35.39 2.52
238 239 6.097412 GTGGCCTCCAAAATCAAATAGATCTT 59.903 38.462 3.32 0.00 32.93 2.40
239 240 5.595952 GTGGCCTCCAAAATCAAATAGATCT 59.404 40.000 3.32 0.00 32.93 2.75
240 241 5.360714 TGTGGCCTCCAAAATCAAATAGATC 59.639 40.000 3.32 0.00 32.93 2.75
241 242 5.271598 TGTGGCCTCCAAAATCAAATAGAT 58.728 37.500 3.32 0.00 34.80 1.98
242 243 4.671831 TGTGGCCTCCAAAATCAAATAGA 58.328 39.130 3.32 0.00 34.18 1.98
243 244 5.170748 GTTGTGGCCTCCAAAATCAAATAG 58.829 41.667 3.32 0.00 32.85 1.73
244 245 4.020662 GGTTGTGGCCTCCAAAATCAAATA 60.021 41.667 3.32 0.00 32.35 1.40
245 246 3.244526 GGTTGTGGCCTCCAAAATCAAAT 60.245 43.478 3.32 0.00 32.35 2.32
246 247 2.103941 GGTTGTGGCCTCCAAAATCAAA 59.896 45.455 3.32 0.00 32.35 2.69
247 248 1.691434 GGTTGTGGCCTCCAAAATCAA 59.309 47.619 3.32 0.00 32.35 2.57
248 249 1.337118 GGTTGTGGCCTCCAAAATCA 58.663 50.000 3.32 0.00 32.35 2.57
249 250 1.000843 GTGGTTGTGGCCTCCAAAATC 59.999 52.381 3.32 1.82 32.85 2.17
250 251 1.047801 GTGGTTGTGGCCTCCAAAAT 58.952 50.000 3.32 0.00 32.85 1.82
251 252 0.324738 TGTGGTTGTGGCCTCCAAAA 60.325 50.000 3.32 0.00 34.18 2.44
252 253 0.105760 ATGTGGTTGTGGCCTCCAAA 60.106 50.000 3.32 3.17 34.18 3.28
253 254 0.827089 CATGTGGTTGTGGCCTCCAA 60.827 55.000 3.32 4.06 34.18 3.53
254 255 1.228521 CATGTGGTTGTGGCCTCCA 60.229 57.895 3.32 4.81 0.00 3.86
255 256 1.228552 ACATGTGGTTGTGGCCTCC 60.229 57.895 3.32 1.89 0.00 4.30
256 257 0.537143 TGACATGTGGTTGTGGCCTC 60.537 55.000 1.15 0.00 0.00 4.70
257 258 0.106268 TTGACATGTGGTTGTGGCCT 60.106 50.000 1.15 0.00 0.00 5.19
258 259 0.031994 GTTGACATGTGGTTGTGGCC 59.968 55.000 1.15 0.00 0.00 5.36
259 260 0.743688 TGTTGACATGTGGTTGTGGC 59.256 50.000 1.15 0.00 0.00 5.01
260 261 2.622470 TGATGTTGACATGTGGTTGTGG 59.378 45.455 1.15 0.00 36.57 4.17
261 262 3.986442 TGATGTTGACATGTGGTTGTG 57.014 42.857 1.15 0.00 36.57 3.33
262 263 4.998671 TTTGATGTTGACATGTGGTTGT 57.001 36.364 1.15 0.00 36.57 3.32
263 264 5.406175 GGATTTTGATGTTGACATGTGGTTG 59.594 40.000 1.15 0.00 36.57 3.77
264 265 5.070180 TGGATTTTGATGTTGACATGTGGTT 59.930 36.000 1.15 0.00 36.57 3.67
265 266 4.588106 TGGATTTTGATGTTGACATGTGGT 59.412 37.500 1.15 0.00 36.57 4.16
266 267 4.925054 GTGGATTTTGATGTTGACATGTGG 59.075 41.667 1.15 0.00 36.57 4.17
267 268 5.530712 TGTGGATTTTGATGTTGACATGTG 58.469 37.500 1.15 0.00 36.57 3.21
268 269 5.775686 CTGTGGATTTTGATGTTGACATGT 58.224 37.500 0.00 0.00 36.57 3.21
269 270 4.624024 GCTGTGGATTTTGATGTTGACATG 59.376 41.667 0.57 0.00 36.57 3.21
270 271 4.616604 CGCTGTGGATTTTGATGTTGACAT 60.617 41.667 0.00 0.00 39.70 3.06
271 272 3.304592 CGCTGTGGATTTTGATGTTGACA 60.305 43.478 0.00 0.00 0.00 3.58
272 273 3.058293 TCGCTGTGGATTTTGATGTTGAC 60.058 43.478 0.00 0.00 0.00 3.18
273 274 3.145286 TCGCTGTGGATTTTGATGTTGA 58.855 40.909 0.00 0.00 0.00 3.18
274 275 3.557577 TCGCTGTGGATTTTGATGTTG 57.442 42.857 0.00 0.00 0.00 3.33
275 276 3.305335 GGTTCGCTGTGGATTTTGATGTT 60.305 43.478 0.00 0.00 0.00 2.71
276 277 2.228822 GGTTCGCTGTGGATTTTGATGT 59.771 45.455 0.00 0.00 0.00 3.06
277 278 2.228582 TGGTTCGCTGTGGATTTTGATG 59.771 45.455 0.00 0.00 0.00 3.07
278 279 2.513753 TGGTTCGCTGTGGATTTTGAT 58.486 42.857 0.00 0.00 0.00 2.57
279 280 1.974265 TGGTTCGCTGTGGATTTTGA 58.026 45.000 0.00 0.00 0.00 2.69
280 281 2.393764 GTTGGTTCGCTGTGGATTTTG 58.606 47.619 0.00 0.00 0.00 2.44
281 282 1.339929 GGTTGGTTCGCTGTGGATTTT 59.660 47.619 0.00 0.00 0.00 1.82
282 283 0.958822 GGTTGGTTCGCTGTGGATTT 59.041 50.000 0.00 0.00 0.00 2.17
283 284 0.110486 AGGTTGGTTCGCTGTGGATT 59.890 50.000 0.00 0.00 0.00 3.01
284 285 0.606401 CAGGTTGGTTCGCTGTGGAT 60.606 55.000 0.00 0.00 0.00 3.41
285 286 1.227823 CAGGTTGGTTCGCTGTGGA 60.228 57.895 0.00 0.00 0.00 4.02
286 287 1.525995 ACAGGTTGGTTCGCTGTGG 60.526 57.895 0.00 0.00 0.00 4.17
287 288 1.648720 CACAGGTTGGTTCGCTGTG 59.351 57.895 0.00 0.00 39.22 3.66
288 289 1.525995 CCACAGGTTGGTTCGCTGT 60.526 57.895 0.00 0.00 41.10 4.40
289 290 3.343972 CCACAGGTTGGTTCGCTG 58.656 61.111 0.00 0.00 41.10 5.18
299 300 2.305927 CTCTAACCATCCAACCACAGGT 59.694 50.000 0.00 0.00 37.65 4.00
300 301 2.356125 CCTCTAACCATCCAACCACAGG 60.356 54.545 0.00 0.00 0.00 4.00
301 302 2.356125 CCCTCTAACCATCCAACCACAG 60.356 54.545 0.00 0.00 0.00 3.66
302 303 1.633432 CCCTCTAACCATCCAACCACA 59.367 52.381 0.00 0.00 0.00 4.17
303 304 1.913419 TCCCTCTAACCATCCAACCAC 59.087 52.381 0.00 0.00 0.00 4.16
304 305 1.913419 GTCCCTCTAACCATCCAACCA 59.087 52.381 0.00 0.00 0.00 3.67
305 306 2.092914 CAGTCCCTCTAACCATCCAACC 60.093 54.545 0.00 0.00 0.00 3.77
306 307 2.572104 ACAGTCCCTCTAACCATCCAAC 59.428 50.000 0.00 0.00 0.00 3.77
307 308 2.571653 CACAGTCCCTCTAACCATCCAA 59.428 50.000 0.00 0.00 0.00 3.53
308 309 2.187958 CACAGTCCCTCTAACCATCCA 58.812 52.381 0.00 0.00 0.00 3.41
309 310 1.486726 CCACAGTCCCTCTAACCATCC 59.513 57.143 0.00 0.00 0.00 3.51
310 311 2.188817 ACCACAGTCCCTCTAACCATC 58.811 52.381 0.00 0.00 0.00 3.51
311 312 2.344093 ACCACAGTCCCTCTAACCAT 57.656 50.000 0.00 0.00 0.00 3.55
312 313 3.371965 GATACCACAGTCCCTCTAACCA 58.628 50.000 0.00 0.00 0.00 3.67
313 314 2.699321 GGATACCACAGTCCCTCTAACC 59.301 54.545 0.00 0.00 0.00 2.85
329 330 2.757124 CCTGGTGGGCTGGGGATAC 61.757 68.421 0.00 0.00 0.00 2.24
330 331 2.368192 CCTGGTGGGCTGGGGATA 60.368 66.667 0.00 0.00 0.00 2.59
345 346 2.618045 CGAGCACCAGGATTTAAACCCT 60.618 50.000 0.00 0.00 0.00 4.34
346 347 1.743394 CGAGCACCAGGATTTAAACCC 59.257 52.381 0.00 0.00 0.00 4.11
347 348 1.132453 GCGAGCACCAGGATTTAAACC 59.868 52.381 0.00 0.00 0.00 3.27
348 349 1.810151 TGCGAGCACCAGGATTTAAAC 59.190 47.619 0.00 0.00 0.00 2.01
349 350 2.192664 TGCGAGCACCAGGATTTAAA 57.807 45.000 0.00 0.00 0.00 1.52
350 351 2.418368 ATGCGAGCACCAGGATTTAA 57.582 45.000 0.00 0.00 0.00 1.52
351 352 2.418368 AATGCGAGCACCAGGATTTA 57.582 45.000 0.00 0.00 0.00 1.40
352 353 1.549203 AAATGCGAGCACCAGGATTT 58.451 45.000 0.00 0.00 34.37 2.17
353 354 2.418368 TAAATGCGAGCACCAGGATT 57.582 45.000 0.00 0.00 0.00 3.01
354 355 2.645838 ATAAATGCGAGCACCAGGAT 57.354 45.000 0.00 0.00 0.00 3.24
355 356 2.288666 GAATAAATGCGAGCACCAGGA 58.711 47.619 0.00 0.00 0.00 3.86
356 357 1.334869 GGAATAAATGCGAGCACCAGG 59.665 52.381 0.00 0.00 0.00 4.45
357 358 2.032550 CAGGAATAAATGCGAGCACCAG 59.967 50.000 0.00 0.00 0.00 4.00
358 359 2.016318 CAGGAATAAATGCGAGCACCA 58.984 47.619 0.00 0.00 0.00 4.17
359 360 1.334869 CCAGGAATAAATGCGAGCACC 59.665 52.381 0.00 0.00 0.00 5.01
360 361 2.288666 TCCAGGAATAAATGCGAGCAC 58.711 47.619 0.00 0.00 0.00 4.40
361 362 2.708216 TCCAGGAATAAATGCGAGCA 57.292 45.000 0.00 0.00 0.00 4.26
362 363 4.574599 AAATCCAGGAATAAATGCGAGC 57.425 40.909 0.00 0.00 0.00 5.03
365 366 9.410556 CCTAAAATAAATCCAGGAATAAATGCG 57.589 33.333 0.00 0.00 0.00 4.73
372 373 8.860088 CCGAAATCCTAAAATAAATCCAGGAAT 58.140 33.333 0.00 0.00 38.82 3.01
373 374 7.286775 CCCGAAATCCTAAAATAAATCCAGGAA 59.713 37.037 0.00 0.00 38.82 3.36
374 375 6.775629 CCCGAAATCCTAAAATAAATCCAGGA 59.224 38.462 0.00 0.00 39.63 3.86
375 376 6.516693 GCCCGAAATCCTAAAATAAATCCAGG 60.517 42.308 0.00 0.00 0.00 4.45
376 377 6.040391 TGCCCGAAATCCTAAAATAAATCCAG 59.960 38.462 0.00 0.00 0.00 3.86
377 378 5.894393 TGCCCGAAATCCTAAAATAAATCCA 59.106 36.000 0.00 0.00 0.00 3.41
378 379 6.399639 TGCCCGAAATCCTAAAATAAATCC 57.600 37.500 0.00 0.00 0.00 3.01
379 380 7.095649 GCATTGCCCGAAATCCTAAAATAAATC 60.096 37.037 0.00 0.00 0.00 2.17
380 381 6.705825 GCATTGCCCGAAATCCTAAAATAAAT 59.294 34.615 0.00 0.00 0.00 1.40
381 382 6.045955 GCATTGCCCGAAATCCTAAAATAAA 58.954 36.000 0.00 0.00 0.00 1.40
382 383 5.596845 GCATTGCCCGAAATCCTAAAATAA 58.403 37.500 0.00 0.00 0.00 1.40
383 384 4.261405 CGCATTGCCCGAAATCCTAAAATA 60.261 41.667 2.41 0.00 0.00 1.40
384 385 3.490761 CGCATTGCCCGAAATCCTAAAAT 60.491 43.478 2.41 0.00 0.00 1.82
385 386 2.159310 CGCATTGCCCGAAATCCTAAAA 60.159 45.455 2.41 0.00 0.00 1.52
386 387 1.403679 CGCATTGCCCGAAATCCTAAA 59.596 47.619 2.41 0.00 0.00 1.85
387 388 1.021202 CGCATTGCCCGAAATCCTAA 58.979 50.000 2.41 0.00 0.00 2.69
388 389 1.444119 GCGCATTGCCCGAAATCCTA 61.444 55.000 0.30 0.00 37.76 2.94
389 390 2.774799 GCGCATTGCCCGAAATCCT 61.775 57.895 0.30 0.00 37.76 3.24
390 391 2.278792 GCGCATTGCCCGAAATCC 60.279 61.111 0.30 0.00 37.76 3.01
391 392 0.528249 AATGCGCATTGCCCGAAATC 60.528 50.000 33.48 0.00 45.60 2.17
392 393 0.528249 GAATGCGCATTGCCCGAAAT 60.528 50.000 38.34 13.06 45.60 2.17
393 394 1.153862 GAATGCGCATTGCCCGAAA 60.154 52.632 38.34 0.00 45.60 3.46
394 395 2.268988 CTGAATGCGCATTGCCCGAA 62.269 55.000 38.34 15.71 45.60 4.30
395 396 2.749441 TGAATGCGCATTGCCCGA 60.749 55.556 38.34 14.66 45.60 5.14
396 397 2.278336 CTGAATGCGCATTGCCCG 60.278 61.111 38.34 18.09 45.60 6.13
397 398 1.079875 CAACTGAATGCGCATTGCCC 61.080 55.000 38.34 24.29 45.60 5.36
398 399 1.079875 CCAACTGAATGCGCATTGCC 61.080 55.000 38.34 24.99 45.60 4.52
399 400 0.109179 TCCAACTGAATGCGCATTGC 60.109 50.000 38.34 27.21 46.70 3.56
400 401 1.468565 CCTCCAACTGAATGCGCATTG 60.469 52.381 38.34 26.52 0.00 2.82
401 402 0.813184 CCTCCAACTGAATGCGCATT 59.187 50.000 34.41 34.41 0.00 3.56
402 403 0.035152 TCCTCCAACTGAATGCGCAT 60.035 50.000 19.28 19.28 0.00 4.73
403 404 0.674581 CTCCTCCAACTGAATGCGCA 60.675 55.000 14.96 14.96 0.00 6.09
404 405 0.391661 TCTCCTCCAACTGAATGCGC 60.392 55.000 0.00 0.00 0.00 6.09
405 406 1.363744 GTCTCCTCCAACTGAATGCG 58.636 55.000 0.00 0.00 0.00 4.73
406 407 1.338200 ACGTCTCCTCCAACTGAATGC 60.338 52.381 0.00 0.00 0.00 3.56
407 408 2.751166 ACGTCTCCTCCAACTGAATG 57.249 50.000 0.00 0.00 0.00 2.67
408 409 2.028020 GGAACGTCTCCTCCAACTGAAT 60.028 50.000 8.87 0.00 41.61 2.57
409 410 1.343465 GGAACGTCTCCTCCAACTGAA 59.657 52.381 8.87 0.00 41.61 3.02
410 411 0.966920 GGAACGTCTCCTCCAACTGA 59.033 55.000 8.87 0.00 41.61 3.41
411 412 0.037232 GGGAACGTCTCCTCCAACTG 60.037 60.000 13.94 0.00 44.68 3.16
412 413 2.363297 GGGAACGTCTCCTCCAACT 58.637 57.895 13.94 0.00 44.68 3.16
431 432 0.316032 GTAGGCGTCTCGTCATCGAC 60.316 60.000 0.00 0.00 41.35 4.20
432 433 1.759293 CGTAGGCGTCTCGTCATCGA 61.759 60.000 0.00 0.00 44.12 3.59
433 434 1.367782 CGTAGGCGTCTCGTCATCG 60.368 63.158 0.00 0.00 32.13 3.84
434 435 1.009900 CCGTAGGCGTCTCGTCATC 60.010 63.158 0.00 0.00 46.14 2.92
435 436 3.108343 CCGTAGGCGTCTCGTCAT 58.892 61.111 0.00 0.00 46.14 3.06
447 448 3.114065 GAGATTTACGAAGCCACCGTAG 58.886 50.000 0.00 0.00 42.42 3.51
448 449 2.492881 TGAGATTTACGAAGCCACCGTA 59.507 45.455 0.00 0.00 40.95 4.02
449 450 1.274167 TGAGATTTACGAAGCCACCGT 59.726 47.619 0.00 0.00 43.26 4.83
450 451 2.004583 TGAGATTTACGAAGCCACCG 57.995 50.000 0.00 0.00 0.00 4.94
451 452 3.596214 TCTTGAGATTTACGAAGCCACC 58.404 45.455 0.00 0.00 0.00 4.61
452 453 4.870426 TCATCTTGAGATTTACGAAGCCAC 59.130 41.667 0.00 0.00 31.21 5.01
453 454 5.084818 TCATCTTGAGATTTACGAAGCCA 57.915 39.130 0.00 0.00 31.21 4.75
454 455 7.623089 GCATATCATCTTGAGATTTACGAAGCC 60.623 40.741 0.00 0.00 31.21 4.35
455 456 7.232994 GCATATCATCTTGAGATTTACGAAGC 58.767 38.462 0.00 0.00 31.21 3.86
456 457 7.411264 CGGCATATCATCTTGAGATTTACGAAG 60.411 40.741 0.00 0.00 31.21 3.79
457 458 6.366061 CGGCATATCATCTTGAGATTTACGAA 59.634 38.462 0.00 0.00 31.21 3.85
458 459 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
459 460 5.062683 CCGGCATATCATCTTGAGATTTACG 59.937 44.000 0.00 0.00 31.21 3.18
460 461 5.163814 GCCGGCATATCATCTTGAGATTTAC 60.164 44.000 24.80 0.00 31.21 2.01
461 462 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
462 463 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
463 464 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
464 465 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
465 466 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
466 467 2.289257 TGAGCCGGCATATCATCTTGAG 60.289 50.000 31.54 0.00 0.00 3.02
467 468 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
468 469 2.174363 TGAGCCGGCATATCATCTTG 57.826 50.000 31.54 0.00 0.00 3.02
469 470 2.936919 TTGAGCCGGCATATCATCTT 57.063 45.000 31.54 3.33 0.00 2.40
470 471 2.570752 AGATTGAGCCGGCATATCATCT 59.429 45.455 31.54 22.33 0.00 2.90
471 472 2.983229 AGATTGAGCCGGCATATCATC 58.017 47.619 31.54 20.52 0.00 2.92
472 473 3.430042 AAGATTGAGCCGGCATATCAT 57.570 42.857 31.54 17.14 0.00 2.45
473 474 2.936919 AAGATTGAGCCGGCATATCA 57.063 45.000 31.54 21.33 0.00 2.15
474 475 3.304928 CCAAAAGATTGAGCCGGCATATC 60.305 47.826 31.54 25.17 38.94 1.63
475 476 2.624838 CCAAAAGATTGAGCCGGCATAT 59.375 45.455 31.54 18.37 38.94 1.78
476 477 2.023673 CCAAAAGATTGAGCCGGCATA 58.976 47.619 31.54 14.63 38.94 3.14
477 478 0.819582 CCAAAAGATTGAGCCGGCAT 59.180 50.000 31.54 14.27 38.94 4.40
478 479 0.251121 TCCAAAAGATTGAGCCGGCA 60.251 50.000 31.54 8.70 38.94 5.69
479 480 0.453390 CTCCAAAAGATTGAGCCGGC 59.547 55.000 21.89 21.89 38.94 6.13
480 481 1.098050 CCTCCAAAAGATTGAGCCGG 58.902 55.000 0.00 0.00 38.94 6.13
481 482 0.453390 GCCTCCAAAAGATTGAGCCG 59.547 55.000 0.00 0.00 38.94 5.52
482 483 0.453390 CGCCTCCAAAAGATTGAGCC 59.547 55.000 0.00 0.00 38.94 4.70
483 484 0.179153 GCGCCTCCAAAAGATTGAGC 60.179 55.000 0.00 0.00 38.94 4.26
484 485 1.399791 GAGCGCCTCCAAAAGATTGAG 59.600 52.381 2.29 0.00 38.94 3.02
485 486 1.271325 TGAGCGCCTCCAAAAGATTGA 60.271 47.619 2.29 0.00 38.94 2.57
486 487 1.167851 TGAGCGCCTCCAAAAGATTG 58.832 50.000 2.29 0.00 36.25 2.67
487 488 2.134789 ATGAGCGCCTCCAAAAGATT 57.865 45.000 2.29 0.00 0.00 2.40
488 489 2.486191 CCTATGAGCGCCTCCAAAAGAT 60.486 50.000 2.29 0.00 0.00 2.40
489 490 1.134401 CCTATGAGCGCCTCCAAAAGA 60.134 52.381 2.29 0.00 0.00 2.52
490 491 1.303309 CCTATGAGCGCCTCCAAAAG 58.697 55.000 2.29 2.61 0.00 2.27
491 492 0.107214 CCCTATGAGCGCCTCCAAAA 60.107 55.000 2.29 0.00 0.00 2.44
492 493 1.271840 ACCCTATGAGCGCCTCCAAA 61.272 55.000 2.29 0.00 0.00 3.28
493 494 1.271840 AACCCTATGAGCGCCTCCAA 61.272 55.000 2.29 0.00 0.00 3.53
494 495 0.397957 TAACCCTATGAGCGCCTCCA 60.398 55.000 2.29 0.00 0.00 3.86
495 496 0.318762 CTAACCCTATGAGCGCCTCC 59.681 60.000 2.29 0.00 0.00 4.30
496 497 0.318762 CCTAACCCTATGAGCGCCTC 59.681 60.000 2.29 1.22 0.00 4.70
497 498 1.759459 GCCTAACCCTATGAGCGCCT 61.759 60.000 2.29 0.00 0.00 5.52
498 499 1.301795 GCCTAACCCTATGAGCGCC 60.302 63.158 2.29 0.00 0.00 6.53
499 500 0.601311 CAGCCTAACCCTATGAGCGC 60.601 60.000 0.00 0.00 0.00 5.92
500 501 0.753262 ACAGCCTAACCCTATGAGCG 59.247 55.000 0.00 0.00 0.00 5.03
501 502 1.811941 GCACAGCCTAACCCTATGAGC 60.812 57.143 0.00 0.00 0.00 4.26
502 503 1.539065 CGCACAGCCTAACCCTATGAG 60.539 57.143 0.00 0.00 0.00 2.90
503 504 0.464036 CGCACAGCCTAACCCTATGA 59.536 55.000 0.00 0.00 0.00 2.15
504 505 0.178068 ACGCACAGCCTAACCCTATG 59.822 55.000 0.00 0.00 0.00 2.23
505 506 0.178068 CACGCACAGCCTAACCCTAT 59.822 55.000 0.00 0.00 0.00 2.57
506 507 1.189524 ACACGCACAGCCTAACCCTA 61.190 55.000 0.00 0.00 0.00 3.53
507 508 2.347490 CACGCACAGCCTAACCCT 59.653 61.111 0.00 0.00 0.00 4.34
508 509 2.032071 ACACGCACAGCCTAACCC 59.968 61.111 0.00 0.00 0.00 4.11
509 510 2.966309 GCACACGCACAGCCTAACC 61.966 63.158 0.00 0.00 38.36 2.85
510 511 2.556287 GCACACGCACAGCCTAAC 59.444 61.111 0.00 0.00 38.36 2.34
511 512 3.041351 CGCACACGCACAGCCTAA 61.041 61.111 0.00 0.00 38.40 2.69
521 522 1.272784 TTCTTACAGACGCGCACACG 61.273 55.000 5.73 0.00 44.07 4.49
522 523 0.856641 TTTCTTACAGACGCGCACAC 59.143 50.000 5.73 0.00 0.00 3.82
523 524 1.136690 CTTTCTTACAGACGCGCACA 58.863 50.000 5.73 0.00 0.00 4.57
524 525 1.415374 TCTTTCTTACAGACGCGCAC 58.585 50.000 5.73 0.00 0.00 5.34
525 526 2.143008 TTCTTTCTTACAGACGCGCA 57.857 45.000 5.73 0.00 0.00 6.09
526 527 3.470562 CTTTTCTTTCTTACAGACGCGC 58.529 45.455 5.73 0.00 0.00 6.86
527 528 3.184581 AGCTTTTCTTTCTTACAGACGCG 59.815 43.478 3.53 3.53 0.00 6.01
528 529 4.211374 TCAGCTTTTCTTTCTTACAGACGC 59.789 41.667 0.00 0.00 0.00 5.19
529 530 5.907197 TCAGCTTTTCTTTCTTACAGACG 57.093 39.130 0.00 0.00 0.00 4.18
530 531 7.484035 TCTTCAGCTTTTCTTTCTTACAGAC 57.516 36.000 0.00 0.00 0.00 3.51
531 532 7.012421 GGTTCTTCAGCTTTTCTTTCTTACAGA 59.988 37.037 0.00 0.00 0.00 3.41
532 533 7.135467 GGTTCTTCAGCTTTTCTTTCTTACAG 58.865 38.462 0.00 0.00 0.00 2.74
533 534 6.039382 GGGTTCTTCAGCTTTTCTTTCTTACA 59.961 38.462 0.00 0.00 0.00 2.41
534 535 6.439599 GGGTTCTTCAGCTTTTCTTTCTTAC 58.560 40.000 0.00 0.00 0.00 2.34
535 536 5.535030 GGGGTTCTTCAGCTTTTCTTTCTTA 59.465 40.000 0.00 0.00 0.00 2.10
536 537 4.342378 GGGGTTCTTCAGCTTTTCTTTCTT 59.658 41.667 0.00 0.00 0.00 2.52
537 538 3.891977 GGGGTTCTTCAGCTTTTCTTTCT 59.108 43.478 0.00 0.00 0.00 2.52
538 539 3.891977 AGGGGTTCTTCAGCTTTTCTTTC 59.108 43.478 0.00 0.00 0.00 2.62
539 540 3.638627 CAGGGGTTCTTCAGCTTTTCTTT 59.361 43.478 0.00 0.00 0.00 2.52
540 541 3.225940 CAGGGGTTCTTCAGCTTTTCTT 58.774 45.455 0.00 0.00 0.00 2.52
541 542 2.175715 ACAGGGGTTCTTCAGCTTTTCT 59.824 45.455 0.00 0.00 0.00 2.52
542 543 2.587522 ACAGGGGTTCTTCAGCTTTTC 58.412 47.619 0.00 0.00 0.00 2.29
543 544 2.755952 ACAGGGGTTCTTCAGCTTTT 57.244 45.000 0.00 0.00 0.00 2.27
544 545 4.082125 CAATACAGGGGTTCTTCAGCTTT 58.918 43.478 0.00 0.00 0.00 3.51
545 546 3.074538 ACAATACAGGGGTTCTTCAGCTT 59.925 43.478 0.00 0.00 0.00 3.74
546 547 2.644798 ACAATACAGGGGTTCTTCAGCT 59.355 45.455 0.00 0.00 0.00 4.24
547 548 3.073274 ACAATACAGGGGTTCTTCAGC 57.927 47.619 0.00 0.00 0.00 4.26
548 549 6.371825 GTCTTAACAATACAGGGGTTCTTCAG 59.628 42.308 0.00 0.00 0.00 3.02
549 550 6.235664 GTCTTAACAATACAGGGGTTCTTCA 58.764 40.000 0.00 0.00 0.00 3.02
550 551 5.646793 GGTCTTAACAATACAGGGGTTCTTC 59.353 44.000 0.00 0.00 0.00 2.87
551 552 5.073965 TGGTCTTAACAATACAGGGGTTCTT 59.926 40.000 0.00 0.00 0.00 2.52
552 553 4.600111 TGGTCTTAACAATACAGGGGTTCT 59.400 41.667 0.00 0.00 0.00 3.01
553 554 4.913784 TGGTCTTAACAATACAGGGGTTC 58.086 43.478 0.00 0.00 0.00 3.62
554 555 4.809691 GCTGGTCTTAACAATACAGGGGTT 60.810 45.833 0.00 0.00 0.00 4.11
555 556 3.308188 GCTGGTCTTAACAATACAGGGGT 60.308 47.826 0.00 0.00 0.00 4.95
556 557 3.279434 GCTGGTCTTAACAATACAGGGG 58.721 50.000 0.00 0.00 0.00 4.79
561 562 3.951663 ACTGGGCTGGTCTTAACAATAC 58.048 45.455 0.00 0.00 0.00 1.89
566 567 4.202233 GGATACTACTGGGCTGGTCTTAAC 60.202 50.000 0.00 0.00 0.00 2.01
587 588 2.829720 ACTACTGTTAAGGACATGCGGA 59.170 45.455 0.00 0.00 37.69 5.54
598 601 5.703978 TGCGGTTGTACTACTACTGTTAA 57.296 39.130 7.38 0.00 33.68 2.01
599 602 5.703978 TTGCGGTTGTACTACTACTGTTA 57.296 39.130 7.38 0.35 33.68 2.41
602 605 5.163893 CCAAATTGCGGTTGTACTACTACTG 60.164 44.000 7.38 5.51 34.16 2.74
604 607 4.931002 TCCAAATTGCGGTTGTACTACTAC 59.069 41.667 7.38 1.14 0.00 2.73
605 608 4.931002 GTCCAAATTGCGGTTGTACTACTA 59.069 41.667 7.38 0.00 0.00 1.82
608 614 3.749088 CAGTCCAAATTGCGGTTGTACTA 59.251 43.478 0.00 0.00 0.00 1.82
616 622 2.749076 TGATCTTCAGTCCAAATTGCGG 59.251 45.455 0.00 0.00 0.00 5.69
625 631 3.760684 AGCAAACCATTGATCTTCAGTCC 59.239 43.478 0.00 0.00 38.94 3.85
678 684 4.565022 GAGGAGAAACTTTGAGACTGGAG 58.435 47.826 0.00 0.00 0.00 3.86
723 729 1.857777 CCCAGGACCCCCTCAAAAA 59.142 57.895 0.00 0.00 42.02 1.94
724 730 2.852281 GCCCAGGACCCCCTCAAAA 61.852 63.158 0.00 0.00 42.02 2.44
725 731 2.424989 TAGCCCAGGACCCCCTCAAA 62.425 60.000 0.00 0.00 42.02 2.69
726 732 2.887846 TAGCCCAGGACCCCCTCAA 61.888 63.158 0.00 0.00 42.02 3.02
727 733 3.289211 TAGCCCAGGACCCCCTCA 61.289 66.667 0.00 0.00 42.02 3.86
728 734 2.768769 GTAGCCCAGGACCCCCTC 60.769 72.222 0.00 0.00 42.02 4.30
729 735 4.798682 CGTAGCCCAGGACCCCCT 62.799 72.222 0.00 0.00 45.74 4.79
731 737 1.266867 TTAACGTAGCCCAGGACCCC 61.267 60.000 0.00 0.00 0.00 4.95
732 738 0.835276 ATTAACGTAGCCCAGGACCC 59.165 55.000 0.00 0.00 0.00 4.46
733 739 2.093341 TCAATTAACGTAGCCCAGGACC 60.093 50.000 0.00 0.00 0.00 4.46
734 740 3.255969 TCAATTAACGTAGCCCAGGAC 57.744 47.619 0.00 0.00 0.00 3.85
735 741 3.709653 AGATCAATTAACGTAGCCCAGGA 59.290 43.478 0.00 0.00 0.00 3.86
736 742 3.809832 CAGATCAATTAACGTAGCCCAGG 59.190 47.826 0.00 0.00 0.00 4.45
737 743 4.442706 ACAGATCAATTAACGTAGCCCAG 58.557 43.478 0.00 0.00 0.00 4.45
755 761 1.470805 CGCCAATACGTCATGGACAGA 60.471 52.381 20.43 0.00 39.12 3.41
756 762 0.930310 CGCCAATACGTCATGGACAG 59.070 55.000 20.43 8.93 39.12 3.51
906 913 3.944087 AGCTCCTCGATATAATTTGGCC 58.056 45.455 0.00 0.00 0.00 5.36
925 969 6.237463 GCTTGTTTGCGTGGTATTTTATAAGC 60.237 38.462 0.00 0.00 0.00 3.09
939 983 1.001378 GATTCAGTGGCTTGTTTGCGT 60.001 47.619 0.00 0.00 0.00 5.24
965 1009 1.003003 GAAGGAGCAGAGCTGGTTTCT 59.997 52.381 3.49 2.77 39.88 2.52
1029 1073 1.964373 GAAGACGAAAAGGGCGGCA 60.964 57.895 12.47 0.00 39.80 5.69
1127 1174 3.154473 CGAGGAAGGGGATGGCGA 61.154 66.667 0.00 0.00 0.00 5.54
1267 1314 4.400961 GAAGCACTCCCTGGCGCT 62.401 66.667 7.64 0.00 35.90 5.92
1740 1793 1.593209 GTTCCTCACGCCGAACACA 60.593 57.895 0.00 0.00 38.58 3.72
1776 1829 2.678934 AACGCGTCCCTCCTGCTA 60.679 61.111 14.44 0.00 0.00 3.49
1844 1897 1.658686 GCTCTTCTTCTCGCCCTCGA 61.659 60.000 0.00 0.00 43.28 4.04
1915 1974 3.058016 CACAGAGCCATGATCGTTTTGTT 60.058 43.478 0.00 0.00 0.00 2.83
1920 1979 0.036105 TGCACAGAGCCATGATCGTT 60.036 50.000 0.00 0.00 44.83 3.85
1922 1981 0.586802 CATGCACAGAGCCATGATCG 59.413 55.000 0.00 0.00 44.83 3.69
1955 2029 3.799420 GTGAAAGACGATATGGAGTGAGC 59.201 47.826 0.00 0.00 0.00 4.26
1964 2603 6.207810 GGGACTATGAGAGTGAAAGACGATAT 59.792 42.308 0.00 0.00 39.06 1.63
1983 2625 1.203262 AGGTTGGTAGCAGTGGGACTA 60.203 52.381 0.00 0.00 0.00 2.59
2217 3649 1.439644 GGAGGGTCTCGCTGATGAC 59.560 63.158 0.00 0.00 0.00 3.06
2360 3792 2.356278 GGGTGCTTCCATGCCTCA 59.644 61.111 0.00 0.00 38.11 3.86
2362 3794 3.210012 AACGGGTGCTTCCATGCCT 62.210 57.895 0.00 0.00 38.11 4.75
2366 3798 1.002134 CTCCAACGGGTGCTTCCAT 60.002 57.895 0.00 0.00 38.11 3.41
2370 3802 0.535102 CTGAACTCCAACGGGTGCTT 60.535 55.000 0.00 0.00 34.93 3.91
2496 3928 2.594303 CAGCGTGCCCAGAACCAA 60.594 61.111 0.00 0.00 0.00 3.67
2731 4424 2.625737 CTCATCGAACCACTTCATGCT 58.374 47.619 0.00 0.00 0.00 3.79
2790 4849 0.553819 TTAACCCCCACACACTGCTT 59.446 50.000 0.00 0.00 0.00 3.91
2793 4852 0.476771 ACCTTAACCCCCACACACTG 59.523 55.000 0.00 0.00 0.00 3.66
2794 4853 0.476771 CACCTTAACCCCCACACACT 59.523 55.000 0.00 0.00 0.00 3.55
2795 4854 0.475044 TCACCTTAACCCCCACACAC 59.525 55.000 0.00 0.00 0.00 3.82
2796 4855 1.223501 TTCACCTTAACCCCCACACA 58.776 50.000 0.00 0.00 0.00 3.72
2820 4906 1.483004 GTCACCCTCTCTTAAGCCCTC 59.517 57.143 0.00 0.00 0.00 4.30
2871 4958 3.807622 CGAATAACTGCCAACATATCCGT 59.192 43.478 0.00 0.00 0.00 4.69
2954 5041 6.033966 TCTGCGTATTGTAGTATGAACACTG 58.966 40.000 0.00 0.00 0.00 3.66
2976 5063 7.964559 CGTGTTTCATGAAAATATGTGTCATCT 59.035 33.333 22.07 0.00 29.49 2.90
2996 5103 5.945155 TCTACTTTTTGCAAGAACGTGTTT 58.055 33.333 0.00 0.00 0.00 2.83
3001 5108 8.948853 TCATATTTCTACTTTTTGCAAGAACG 57.051 30.769 0.00 0.00 0.00 3.95
3007 5114 9.231297 ACTAGCTTCATATTTCTACTTTTTGCA 57.769 29.630 0.00 0.00 0.00 4.08
3048 5155 9.675464 AGTTAATTTTCAGTCCCGACAATTATA 57.325 29.630 0.00 0.00 0.00 0.98
3050 5157 7.989416 AGTTAATTTTCAGTCCCGACAATTA 57.011 32.000 0.00 0.00 0.00 1.40
3135 5244 6.152661 GGAACCCATTTCACATCTGAATAACA 59.847 38.462 0.00 0.00 36.26 2.41
3185 5294 8.651391 TTGGATAATTTGTGATGATGAATTGC 57.349 30.769 0.00 0.00 0.00 3.56
3264 5393 0.675522 ATTAACACAAGTCGGCCCCG 60.676 55.000 0.00 0.00 41.35 5.73
3324 5456 9.930693 CTGTATCCCTATAGGTATTTCAAAGAC 57.069 37.037 17.72 1.63 36.75 3.01
3345 5477 8.740906 TCGATAGAAGTCAAGTCTTTTCTGTAT 58.259 33.333 7.87 0.00 46.15 2.29
3541 6248 8.860780 ATTATGCAAAATTTGTACCCATGTTT 57.139 26.923 7.60 0.00 0.00 2.83


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.