Multiple sequence alignment - TraesCS5B01G394800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G394800 chr5B 100.000 4863 0 0 1 4863 572395555 572390693 0.000000e+00 8981.0
1 TraesCS5B01G394800 chr5B 83.612 299 41 7 2014 2309 100833237 100833530 1.720000e-69 274.0
2 TraesCS5B01G394800 chr5B 84.962 266 30 7 2333 2592 572392683 572392422 1.340000e-65 261.0
3 TraesCS5B01G394800 chr5B 84.962 266 30 7 2873 3134 572393223 572392964 1.340000e-65 261.0
4 TraesCS5B01G394800 chr5B 93.519 108 7 0 4756 4863 572364509 572364402 1.400000e-35 161.0
5 TraesCS5B01G394800 chr5B 96.552 87 1 2 704 790 687331444 687331360 5.070000e-30 143.0
6 TraesCS5B01G394800 chr5B 74.788 353 45 29 2606 2929 100833413 100833750 8.550000e-23 119.0
7 TraesCS5B01G394800 chr5B 93.478 46 2 1 365 410 630135965 630135921 3.140000e-07 67.6
8 TraesCS5B01G394800 chr5B 91.837 49 1 3 366 414 281174120 281174165 1.130000e-06 65.8
9 TraesCS5B01G394800 chr5A 91.985 1909 98 15 430 2333 585434928 585433070 0.000000e+00 2627.0
10 TraesCS5B01G394800 chr5A 89.402 1104 76 14 2333 3405 585432926 585431833 0.000000e+00 1352.0
11 TraesCS5B01G394800 chr5A 86.600 1000 55 40 3511 4480 585431594 585430644 0.000000e+00 1031.0
12 TraesCS5B01G394800 chr5A 80.675 533 61 17 2605 3106 585433211 585432690 4.600000e-100 375.0
13 TraesCS5B01G394800 chr5A 85.714 350 28 10 4514 4863 585430641 585430314 2.790000e-92 350.0
14 TraesCS5B01G394800 chr5A 88.272 162 11 6 4707 4863 585417291 585417133 2.310000e-43 187.0
15 TraesCS5B01G394800 chr5A 96.591 88 3 0 703 790 10954230 10954143 3.920000e-31 147.0
16 TraesCS5B01G394800 chr5A 95.506 89 3 1 702 790 2722774 2722687 1.820000e-29 141.0
17 TraesCS5B01G394800 chr5A 95.506 89 3 1 702 790 3086718 3086805 1.820000e-29 141.0
18 TraesCS5B01G394800 chr5A 84.211 57 6 3 2606 2659 134722018 134721962 9.000000e-03 52.8
19 TraesCS5B01G394800 chr5A 84.211 57 6 2 2606 2659 420346349 420346293 9.000000e-03 52.8
20 TraesCS5B01G394800 chr5D 88.451 1749 118 28 599 2329 465039191 465037509 0.000000e+00 2034.0
21 TraesCS5B01G394800 chr5D 87.016 801 46 29 3462 4243 465034853 465034092 0.000000e+00 850.0
22 TraesCS5B01G394800 chr5D 88.911 514 38 2 2892 3405 465035379 465034885 2.490000e-172 616.0
23 TraesCS5B01G394800 chr5D 85.861 488 41 9 2388 2851 465037315 465036832 1.220000e-135 494.0
24 TraesCS5B01G394800 chr5D 83.784 333 22 10 4545 4863 465031969 465031655 2.210000e-73 287.0
25 TraesCS5B01G394800 chr5D 76.377 563 69 38 2606 3134 465037645 465037113 1.350000e-60 244.0
26 TraesCS5B01G394800 chr5D 87.857 140 11 4 4730 4863 465012745 465012606 5.040000e-35 159.0
27 TraesCS5B01G394800 chr5D 89.600 125 11 2 4348 4471 465032119 465031996 1.810000e-34 158.0
28 TraesCS5B01G394800 chr5D 94.000 100 6 0 4764 4863 465022497 465022398 8.430000e-33 152.0
29 TraesCS5B01G394800 chr5D 95.556 90 2 2 706 794 6822761 6822673 5.070000e-30 143.0
30 TraesCS5B01G394800 chr5D 93.478 46 2 1 364 409 505817071 505817027 3.140000e-07 67.6
31 TraesCS5B01G394800 chr7A 83.923 311 40 8 2004 2309 616969628 616969933 6.160000e-74 289.0
32 TraesCS5B01G394800 chr6A 81.197 234 33 4 2049 2272 481047085 481047317 1.390000e-40 178.0
33 TraesCS5B01G394800 chr6A 83.871 62 7 3 2606 2664 586809518 586809579 6.800000e-04 56.5
34 TraesCS5B01G394800 chr4B 94.737 95 3 1 703 797 14343230 14343322 3.920000e-31 147.0
35 TraesCS5B01G394800 chr4B 100.000 38 0 0 364 401 652887529 652887566 2.430000e-08 71.3
36 TraesCS5B01G394800 chr2A 84.076 157 18 5 1583 1738 559612143 559611993 1.410000e-30 145.0
37 TraesCS5B01G394800 chr2A 84.211 57 6 3 2606 2659 707305769 707305713 9.000000e-03 52.8
38 TraesCS5B01G394800 chr4D 95.604 91 1 3 710 799 7904982 7905070 5.070000e-30 143.0
39 TraesCS5B01G394800 chr4D 92.000 50 4 0 1689 1738 291768030 291768079 2.430000e-08 71.3
40 TraesCS5B01G394800 chr4D 87.037 54 5 2 365 416 178577611 178577558 5.260000e-05 60.2
41 TraesCS5B01G394800 chr2B 85.294 102 9 3 1637 1738 512310155 512310060 3.100000e-17 100.0
42 TraesCS5B01G394800 chr7B 92.157 51 4 0 364 414 84246189 84246239 6.750000e-09 73.1
43 TraesCS5B01G394800 chr1A 100.000 37 0 0 364 400 448260271 448260235 8.730000e-08 69.4
44 TraesCS5B01G394800 chr4A 95.349 43 1 1 365 406 632619653 632619611 3.140000e-07 67.6
45 TraesCS5B01G394800 chr3B 95.238 42 2 0 364 405 741301431 741301472 3.140000e-07 67.6
46 TraesCS5B01G394800 chr3A 83.871 62 7 3 2606 2664 265925 265864 6.800000e-04 56.5
47 TraesCS5B01G394800 chr3A 86.275 51 4 3 2606 2653 311860572 311860622 9.000000e-03 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G394800 chr5B 572390693 572395555 4862 True 3167.666667 8981 89.974667 1 4863 3 chr5B.!!$R4 4862
1 TraesCS5B01G394800 chr5A 585430314 585434928 4614 True 1147.000000 2627 86.875200 430 4863 5 chr5A.!!$R6 4433
2 TraesCS5B01G394800 chr5D 465031655 465039191 7536 True 669.000000 2034 85.714286 599 4863 7 chr5D.!!$R5 4264

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
191 192 0.031449 CCAAACCGCCGTCAAACAAT 59.969 50.0 0.0 0.00 0.00 2.71 F
275 276 0.032403 TTTCGACCGTACACACCCTG 59.968 55.0 0.0 0.00 0.00 4.45 F
366 367 0.040067 GCGCCATGGAATTTCCGATC 60.040 55.0 18.4 0.00 40.17 3.69 F
799 806 0.108186 CTACAGGCGCCTTGTGATGA 60.108 55.0 30.6 12.05 0.00 2.92 F
1842 1871 0.895530 CGGTTCTTCTGCTCTACCCA 59.104 55.0 0.0 0.00 0.00 4.51 F
2131 2160 1.009829 CACAAGGGACGCTATTGAGC 58.990 55.0 0.0 0.00 46.00 4.26 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1842 1871 0.678366 AGTCGCTCGACATGACCTCT 60.678 55.000 22.18 0.0 46.76 3.69 R
2106 2135 0.970640 TAGCGTCCCTTGTGTAAGCA 59.029 50.000 0.00 0.0 32.40 3.91 R
2236 2265 4.051922 CCTGCCTCGTGACATTTAGATAC 58.948 47.826 0.00 0.0 0.00 2.24 R
2257 2286 4.537135 TGTATGAAGAGGTTGTGACTCC 57.463 45.455 0.00 0.0 35.58 3.85 R
3407 5035 0.963962 ACCGTGAATCACACCGTACT 59.036 50.000 14.24 0.0 45.73 2.73 R
3898 5693 0.328258 GCACCCTTAGCCTCTTCCAA 59.672 55.000 0.00 0.0 0.00 3.53 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 3.616956 ATCATCGGAAGACAAAGCTCA 57.383 42.857 0.00 0.00 46.97 4.26
23 24 2.688507 TCATCGGAAGACAAAGCTCAC 58.311 47.619 0.00 0.00 46.97 3.51
24 25 1.391485 CATCGGAAGACAAAGCTCACG 59.609 52.381 0.00 0.00 46.97 4.35
25 26 0.671796 TCGGAAGACAAAGCTCACGA 59.328 50.000 0.00 0.00 33.31 4.35
26 27 0.784778 CGGAAGACAAAGCTCACGAC 59.215 55.000 0.00 0.00 0.00 4.34
27 28 1.865865 GGAAGACAAAGCTCACGACA 58.134 50.000 0.00 0.00 0.00 4.35
28 29 1.795286 GGAAGACAAAGCTCACGACAG 59.205 52.381 0.00 0.00 0.00 3.51
29 30 2.545952 GGAAGACAAAGCTCACGACAGA 60.546 50.000 0.00 0.00 0.00 3.41
30 31 2.430546 AGACAAAGCTCACGACAGAG 57.569 50.000 0.00 0.00 38.68 3.35
31 32 1.957177 AGACAAAGCTCACGACAGAGA 59.043 47.619 8.13 0.00 37.87 3.10
32 33 2.362397 AGACAAAGCTCACGACAGAGAA 59.638 45.455 8.13 0.00 37.87 2.87
33 34 3.123804 GACAAAGCTCACGACAGAGAAA 58.876 45.455 8.13 0.00 37.87 2.52
34 35 2.866762 ACAAAGCTCACGACAGAGAAAC 59.133 45.455 8.13 0.00 37.87 2.78
35 36 3.126831 CAAAGCTCACGACAGAGAAACT 58.873 45.455 8.13 0.00 37.87 2.66
56 57 4.566004 CTGAAGTTCAGTCCCGTTATTCA 58.434 43.478 22.48 0.00 39.58 2.57
57 58 4.566004 TGAAGTTCAGTCCCGTTATTCAG 58.434 43.478 0.08 0.00 0.00 3.02
58 59 2.973945 AGTTCAGTCCCGTTATTCAGC 58.026 47.619 0.00 0.00 0.00 4.26
59 60 1.659098 GTTCAGTCCCGTTATTCAGCG 59.341 52.381 0.00 0.00 0.00 5.18
60 61 0.459585 TCAGTCCCGTTATTCAGCGC 60.460 55.000 0.00 0.00 0.00 5.92
61 62 1.518572 AGTCCCGTTATTCAGCGCG 60.519 57.895 0.00 0.00 0.00 6.86
62 63 2.202824 TCCCGTTATTCAGCGCGG 60.203 61.111 8.83 0.00 43.40 6.46
64 65 2.510691 CCGTTATTCAGCGCGGGT 60.511 61.111 8.83 0.00 40.45 5.28
65 66 2.701006 CGTTATTCAGCGCGGGTG 59.299 61.111 8.83 4.70 0.00 4.61
66 67 2.808958 CGTTATTCAGCGCGGGTGG 61.809 63.158 8.83 0.00 0.00 4.61
67 68 2.124901 TTATTCAGCGCGGGTGGG 60.125 61.111 8.83 0.00 0.00 4.61
68 69 3.690685 TTATTCAGCGCGGGTGGGG 62.691 63.158 8.83 0.00 0.00 4.96
79 80 4.295199 GGTGGGGAAAGCGGGGTT 62.295 66.667 0.00 0.00 0.00 4.11
80 81 2.758434 GTGGGGAAAGCGGGGTTA 59.242 61.111 0.00 0.00 0.00 2.85
81 82 1.075305 GTGGGGAAAGCGGGGTTAA 59.925 57.895 0.00 0.00 0.00 2.01
82 83 0.540133 GTGGGGAAAGCGGGGTTAAA 60.540 55.000 0.00 0.00 0.00 1.52
83 84 0.410270 TGGGGAAAGCGGGGTTAAAT 59.590 50.000 0.00 0.00 0.00 1.40
84 85 0.821517 GGGGAAAGCGGGGTTAAATG 59.178 55.000 0.00 0.00 0.00 2.32
85 86 0.174845 GGGAAAGCGGGGTTAAATGC 59.825 55.000 0.00 0.00 0.00 3.56
86 87 0.892063 GGAAAGCGGGGTTAAATGCA 59.108 50.000 0.00 0.00 0.00 3.96
87 88 1.135112 GGAAAGCGGGGTTAAATGCAG 60.135 52.381 0.00 0.00 0.00 4.41
88 89 1.544246 GAAAGCGGGGTTAAATGCAGT 59.456 47.619 0.00 0.00 0.00 4.40
89 90 1.627864 AAGCGGGGTTAAATGCAGTT 58.372 45.000 4.23 4.23 0.00 3.16
90 91 0.887933 AGCGGGGTTAAATGCAGTTG 59.112 50.000 10.14 0.00 0.00 3.16
91 92 0.108851 GCGGGGTTAAATGCAGTTGG 60.109 55.000 10.14 0.00 0.00 3.77
92 93 1.253100 CGGGGTTAAATGCAGTTGGT 58.747 50.000 10.14 0.00 0.00 3.67
93 94 1.067915 CGGGGTTAAATGCAGTTGGTG 60.068 52.381 10.14 0.00 0.00 4.17
94 95 1.275010 GGGGTTAAATGCAGTTGGTGG 59.725 52.381 10.14 0.00 0.00 4.61
95 96 1.967779 GGGTTAAATGCAGTTGGTGGT 59.032 47.619 10.14 0.00 0.00 4.16
96 97 2.029380 GGGTTAAATGCAGTTGGTGGTC 60.029 50.000 10.14 0.00 0.00 4.02
97 98 2.029380 GGTTAAATGCAGTTGGTGGTCC 60.029 50.000 10.14 0.00 0.00 4.46
98 99 1.529226 TAAATGCAGTTGGTGGTCCG 58.471 50.000 10.14 0.00 36.30 4.79
99 100 1.178534 AAATGCAGTTGGTGGTCCGG 61.179 55.000 0.00 0.00 36.30 5.14
100 101 3.567579 ATGCAGTTGGTGGTCCGGG 62.568 63.158 0.00 0.00 36.30 5.73
117 118 2.042230 GCCCCCTCCCGTCTTCTA 60.042 66.667 0.00 0.00 0.00 2.10
118 119 2.433146 GCCCCCTCCCGTCTTCTAC 61.433 68.421 0.00 0.00 0.00 2.59
119 120 1.761271 CCCCCTCCCGTCTTCTACC 60.761 68.421 0.00 0.00 0.00 3.18
120 121 1.761271 CCCCTCCCGTCTTCTACCC 60.761 68.421 0.00 0.00 0.00 3.69
121 122 2.125961 CCCTCCCGTCTTCTACCCG 61.126 68.421 0.00 0.00 0.00 5.28
122 123 2.783288 CCTCCCGTCTTCTACCCGC 61.783 68.421 0.00 0.00 0.00 6.13
123 124 1.753463 CTCCCGTCTTCTACCCGCT 60.753 63.158 0.00 0.00 0.00 5.52
124 125 1.726533 CTCCCGTCTTCTACCCGCTC 61.727 65.000 0.00 0.00 0.00 5.03
125 126 2.783288 CCCGTCTTCTACCCGCTCC 61.783 68.421 0.00 0.00 0.00 4.70
126 127 2.050350 CCGTCTTCTACCCGCTCCA 61.050 63.158 0.00 0.00 0.00 3.86
127 128 1.139095 CGTCTTCTACCCGCTCCAC 59.861 63.158 0.00 0.00 0.00 4.02
128 129 1.516423 GTCTTCTACCCGCTCCACC 59.484 63.158 0.00 0.00 0.00 4.61
129 130 1.684734 TCTTCTACCCGCTCCACCC 60.685 63.158 0.00 0.00 0.00 4.61
130 131 3.072468 TTCTACCCGCTCCACCCG 61.072 66.667 0.00 0.00 0.00 5.28
131 132 3.892104 TTCTACCCGCTCCACCCGT 62.892 63.158 0.00 0.00 0.00 5.28
132 133 3.387947 CTACCCGCTCCACCCGTT 61.388 66.667 0.00 0.00 0.00 4.44
133 134 2.037049 TACCCGCTCCACCCGTTA 59.963 61.111 0.00 0.00 0.00 3.18
134 135 2.288788 CTACCCGCTCCACCCGTTAC 62.289 65.000 0.00 0.00 0.00 2.50
135 136 4.462280 CCCGCTCCACCCGTTACC 62.462 72.222 0.00 0.00 0.00 2.85
136 137 3.697747 CCGCTCCACCCGTTACCA 61.698 66.667 0.00 0.00 0.00 3.25
137 138 2.582436 CGCTCCACCCGTTACCAT 59.418 61.111 0.00 0.00 0.00 3.55
138 139 1.813753 CGCTCCACCCGTTACCATG 60.814 63.158 0.00 0.00 0.00 3.66
139 140 2.112815 GCTCCACCCGTTACCATGC 61.113 63.158 0.00 0.00 0.00 4.06
140 141 1.451387 CTCCACCCGTTACCATGCC 60.451 63.158 0.00 0.00 0.00 4.40
141 142 2.822255 CCACCCGTTACCATGCCG 60.822 66.667 0.00 0.00 0.00 5.69
142 143 2.046700 CACCCGTTACCATGCCGT 60.047 61.111 0.00 0.00 0.00 5.68
143 144 1.673009 CACCCGTTACCATGCCGTT 60.673 57.895 0.00 0.00 0.00 4.44
144 145 1.073548 ACCCGTTACCATGCCGTTT 59.926 52.632 0.00 0.00 0.00 3.60
145 146 1.238625 ACCCGTTACCATGCCGTTTG 61.239 55.000 0.00 0.00 0.00 2.93
146 147 1.154112 CCGTTACCATGCCGTTTGC 60.154 57.895 0.00 0.00 41.77 3.68
156 157 2.550487 GCCGTTTGCACCTATCACA 58.450 52.632 0.00 0.00 40.77 3.58
157 158 0.878416 GCCGTTTGCACCTATCACAA 59.122 50.000 0.00 0.00 40.77 3.33
158 159 1.268352 GCCGTTTGCACCTATCACAAA 59.732 47.619 0.00 0.00 40.77 2.83
159 160 2.920647 GCCGTTTGCACCTATCACAAAC 60.921 50.000 7.57 7.57 46.06 2.93
161 162 3.619233 GTTTGCACCTATCACAAACGT 57.381 42.857 0.00 0.00 42.42 3.99
162 163 3.959943 GTTTGCACCTATCACAAACGTT 58.040 40.909 0.00 0.00 42.42 3.99
163 164 3.617540 TTGCACCTATCACAAACGTTG 57.382 42.857 0.00 0.00 0.00 4.10
164 165 2.839975 TGCACCTATCACAAACGTTGA 58.160 42.857 0.00 0.00 0.00 3.18
165 166 3.407698 TGCACCTATCACAAACGTTGAT 58.592 40.909 0.00 3.75 0.00 2.57
166 167 4.570930 TGCACCTATCACAAACGTTGATA 58.429 39.130 0.00 4.87 0.00 2.15
167 168 4.390603 TGCACCTATCACAAACGTTGATAC 59.609 41.667 0.00 0.00 0.00 2.24
168 169 4.390603 GCACCTATCACAAACGTTGATACA 59.609 41.667 0.00 0.00 0.00 2.29
169 170 5.445939 GCACCTATCACAAACGTTGATACAG 60.446 44.000 0.00 1.06 0.00 2.74
170 171 5.637810 CACCTATCACAAACGTTGATACAGT 59.362 40.000 0.00 1.67 0.00 3.55
171 172 6.809689 CACCTATCACAAACGTTGATACAGTA 59.190 38.462 0.00 0.00 0.00 2.74
172 173 6.810182 ACCTATCACAAACGTTGATACAGTAC 59.190 38.462 0.00 0.00 0.00 2.73
173 174 6.255020 CCTATCACAAACGTTGATACAGTACC 59.745 42.308 0.00 0.00 0.00 3.34
174 175 4.946445 TCACAAACGTTGATACAGTACCA 58.054 39.130 0.00 0.00 0.00 3.25
175 176 5.358090 TCACAAACGTTGATACAGTACCAA 58.642 37.500 0.00 0.00 0.00 3.67
176 177 5.816258 TCACAAACGTTGATACAGTACCAAA 59.184 36.000 0.00 0.00 0.00 3.28
177 178 5.905181 CACAAACGTTGATACAGTACCAAAC 59.095 40.000 0.00 0.00 0.00 2.93
178 179 5.007921 ACAAACGTTGATACAGTACCAAACC 59.992 40.000 0.00 0.00 0.00 3.27
179 180 3.319755 ACGTTGATACAGTACCAAACCG 58.680 45.455 0.00 0.00 0.00 4.44
180 181 2.093152 CGTTGATACAGTACCAAACCGC 59.907 50.000 0.00 0.00 0.00 5.68
181 182 2.389962 TGATACAGTACCAAACCGCC 57.610 50.000 0.00 0.00 0.00 6.13
182 183 1.283736 GATACAGTACCAAACCGCCG 58.716 55.000 0.00 0.00 0.00 6.46
183 184 0.609662 ATACAGTACCAAACCGCCGT 59.390 50.000 0.00 0.00 0.00 5.68
184 185 0.038343 TACAGTACCAAACCGCCGTC 60.038 55.000 0.00 0.00 0.00 4.79
185 186 1.301087 CAGTACCAAACCGCCGTCA 60.301 57.895 0.00 0.00 0.00 4.35
186 187 0.881159 CAGTACCAAACCGCCGTCAA 60.881 55.000 0.00 0.00 0.00 3.18
187 188 0.179051 AGTACCAAACCGCCGTCAAA 60.179 50.000 0.00 0.00 0.00 2.69
188 189 0.041047 GTACCAAACCGCCGTCAAAC 60.041 55.000 0.00 0.00 0.00 2.93
189 190 0.463295 TACCAAACCGCCGTCAAACA 60.463 50.000 0.00 0.00 0.00 2.83
190 191 1.313812 ACCAAACCGCCGTCAAACAA 61.314 50.000 0.00 0.00 0.00 2.83
191 192 0.031449 CCAAACCGCCGTCAAACAAT 59.969 50.000 0.00 0.00 0.00 2.71
192 193 1.127701 CAAACCGCCGTCAAACAATG 58.872 50.000 0.00 0.00 0.00 2.82
193 194 0.741915 AAACCGCCGTCAAACAATGT 59.258 45.000 0.00 0.00 0.00 2.71
194 195 0.309612 AACCGCCGTCAAACAATGTC 59.690 50.000 0.00 0.00 0.00 3.06
195 196 1.209127 CCGCCGTCAAACAATGTCC 59.791 57.895 0.00 0.00 0.00 4.02
196 197 1.234615 CCGCCGTCAAACAATGTCCT 61.235 55.000 0.00 0.00 0.00 3.85
197 198 0.165944 CGCCGTCAAACAATGTCCTC 59.834 55.000 0.00 0.00 0.00 3.71
198 199 1.234821 GCCGTCAAACAATGTCCTCA 58.765 50.000 0.00 0.00 0.00 3.86
199 200 1.606668 GCCGTCAAACAATGTCCTCAA 59.393 47.619 0.00 0.00 0.00 3.02
200 201 2.228822 GCCGTCAAACAATGTCCTCAAT 59.771 45.455 0.00 0.00 0.00 2.57
201 202 3.825308 CCGTCAAACAATGTCCTCAATG 58.175 45.455 0.00 0.00 0.00 2.82
202 203 3.253188 CCGTCAAACAATGTCCTCAATGT 59.747 43.478 0.00 0.00 39.08 2.71
203 204 4.466828 CGTCAAACAATGTCCTCAATGTC 58.533 43.478 0.00 0.00 36.78 3.06
204 205 4.613622 CGTCAAACAATGTCCTCAATGTCC 60.614 45.833 0.00 0.00 36.78 4.02
205 206 3.501828 TCAAACAATGTCCTCAATGTCCG 59.498 43.478 0.00 0.00 36.78 4.79
206 207 2.859165 ACAATGTCCTCAATGTCCGT 57.141 45.000 0.00 0.00 32.99 4.69
207 208 2.699954 ACAATGTCCTCAATGTCCGTC 58.300 47.619 0.00 0.00 32.99 4.79
208 209 2.303022 ACAATGTCCTCAATGTCCGTCT 59.697 45.455 0.00 0.00 32.99 4.18
209 210 2.674852 CAATGTCCTCAATGTCCGTCTG 59.325 50.000 0.00 0.00 0.00 3.51
210 211 0.037326 TGTCCTCAATGTCCGTCTGC 60.037 55.000 0.00 0.00 0.00 4.26
211 212 0.037326 GTCCTCAATGTCCGTCTGCA 60.037 55.000 0.00 0.00 0.00 4.41
212 213 0.904649 TCCTCAATGTCCGTCTGCAT 59.095 50.000 0.00 0.00 0.00 3.96
213 214 1.012086 CCTCAATGTCCGTCTGCATG 58.988 55.000 0.00 0.00 0.00 4.06
214 215 0.376152 CTCAATGTCCGTCTGCATGC 59.624 55.000 11.82 11.82 0.00 4.06
215 216 1.026182 TCAATGTCCGTCTGCATGCC 61.026 55.000 16.68 0.00 0.00 4.40
216 217 2.108514 AATGTCCGTCTGCATGCCG 61.109 57.895 16.68 9.39 0.00 5.69
217 218 2.803155 AATGTCCGTCTGCATGCCGT 62.803 55.000 16.68 0.00 0.00 5.68
218 219 3.490759 GTCCGTCTGCATGCCGTG 61.491 66.667 16.68 5.65 0.00 4.94
227 228 2.499520 CATGCCGTGCAAACGTCG 60.500 61.111 2.68 0.00 43.62 5.12
228 229 4.383602 ATGCCGTGCAAACGTCGC 62.384 61.111 2.68 3.08 43.62 5.19
233 234 4.383602 GTGCAAACGTCGCCGCAT 62.384 61.111 7.39 0.00 36.64 4.73
234 235 4.083600 TGCAAACGTCGCCGCATC 62.084 61.111 7.39 0.00 37.70 3.91
235 236 4.811761 GCAAACGTCGCCGCATCC 62.812 66.667 0.00 0.00 37.70 3.51
236 237 4.499023 CAAACGTCGCCGCATCCG 62.499 66.667 0.00 0.00 37.70 4.18
240 241 4.246206 CGTCGCCGCATCCGTCTA 62.246 66.667 0.00 0.00 0.00 2.59
241 242 2.353607 GTCGCCGCATCCGTCTAG 60.354 66.667 0.00 0.00 0.00 2.43
242 243 4.266070 TCGCCGCATCCGTCTAGC 62.266 66.667 0.00 0.00 0.00 3.42
243 244 4.569023 CGCCGCATCCGTCTAGCA 62.569 66.667 0.00 0.00 0.00 3.49
244 245 2.029666 GCCGCATCCGTCTAGCAT 59.970 61.111 0.00 0.00 0.00 3.79
245 246 1.289066 GCCGCATCCGTCTAGCATA 59.711 57.895 0.00 0.00 0.00 3.14
246 247 1.009389 GCCGCATCCGTCTAGCATAC 61.009 60.000 0.00 0.00 0.00 2.39
247 248 0.729478 CCGCATCCGTCTAGCATACG 60.729 60.000 0.00 0.00 40.01 3.06
248 249 1.337817 CGCATCCGTCTAGCATACGC 61.338 60.000 0.00 0.00 39.00 4.42
249 250 0.318699 GCATCCGTCTAGCATACGCA 60.319 55.000 0.00 0.00 42.27 5.24
250 251 1.670087 GCATCCGTCTAGCATACGCAT 60.670 52.381 0.00 0.00 42.27 4.73
251 252 2.677199 CATCCGTCTAGCATACGCATT 58.323 47.619 0.00 0.00 42.27 3.56
252 253 2.882927 TCCGTCTAGCATACGCATTT 57.117 45.000 0.00 0.00 42.27 2.32
253 254 3.994204 TCCGTCTAGCATACGCATTTA 57.006 42.857 0.00 0.00 42.27 1.40
254 255 4.310357 TCCGTCTAGCATACGCATTTAA 57.690 40.909 0.00 0.00 42.27 1.52
255 256 4.878439 TCCGTCTAGCATACGCATTTAAT 58.122 39.130 0.00 0.00 42.27 1.40
256 257 5.294356 TCCGTCTAGCATACGCATTTAATT 58.706 37.500 0.00 0.00 42.27 1.40
257 258 5.756347 TCCGTCTAGCATACGCATTTAATTT 59.244 36.000 0.00 0.00 42.27 1.82
258 259 6.259167 TCCGTCTAGCATACGCATTTAATTTT 59.741 34.615 0.00 0.00 42.27 1.82
259 260 6.573725 CCGTCTAGCATACGCATTTAATTTTC 59.426 38.462 0.00 0.00 42.27 2.29
260 261 6.297641 CGTCTAGCATACGCATTTAATTTTCG 59.702 38.462 0.00 0.00 42.27 3.46
261 262 7.342194 GTCTAGCATACGCATTTAATTTTCGA 58.658 34.615 0.00 0.00 42.27 3.71
262 263 7.318205 GTCTAGCATACGCATTTAATTTTCGAC 59.682 37.037 0.00 0.00 42.27 4.20
263 264 5.270853 AGCATACGCATTTAATTTTCGACC 58.729 37.500 0.00 0.00 42.27 4.79
264 265 4.144051 GCATACGCATTTAATTTTCGACCG 59.856 41.667 0.00 0.00 38.36 4.79
265 266 3.817148 ACGCATTTAATTTTCGACCGT 57.183 38.095 0.00 0.00 0.00 4.83
266 267 4.925061 ACGCATTTAATTTTCGACCGTA 57.075 36.364 0.00 0.00 0.00 4.02
267 268 4.640956 ACGCATTTAATTTTCGACCGTAC 58.359 39.130 0.00 0.00 0.00 3.67
268 269 4.152045 ACGCATTTAATTTTCGACCGTACA 59.848 37.500 0.00 0.00 0.00 2.90
269 270 4.489493 CGCATTTAATTTTCGACCGTACAC 59.511 41.667 0.00 0.00 0.00 2.90
270 271 5.383958 GCATTTAATTTTCGACCGTACACA 58.616 37.500 0.00 0.00 0.00 3.72
271 272 5.282076 GCATTTAATTTTCGACCGTACACAC 59.718 40.000 0.00 0.00 0.00 3.82
272 273 4.988708 TTAATTTTCGACCGTACACACC 57.011 40.909 0.00 0.00 0.00 4.16
273 274 1.799544 ATTTTCGACCGTACACACCC 58.200 50.000 0.00 0.00 0.00 4.61
274 275 0.752054 TTTTCGACCGTACACACCCT 59.248 50.000 0.00 0.00 0.00 4.34
275 276 0.032403 TTTCGACCGTACACACCCTG 59.968 55.000 0.00 0.00 0.00 4.45
276 277 1.108727 TTCGACCGTACACACCCTGT 61.109 55.000 0.00 0.00 36.82 4.00
277 278 0.250684 TCGACCGTACACACCCTGTA 60.251 55.000 0.00 0.00 33.91 2.74
284 285 1.176527 TACACACCCTGTACTACCGC 58.823 55.000 0.00 0.00 33.91 5.68
285 286 0.828762 ACACACCCTGTACTACCGCA 60.829 55.000 0.00 0.00 0.00 5.69
286 287 0.535335 CACACCCTGTACTACCGCAT 59.465 55.000 0.00 0.00 0.00 4.73
287 288 0.822164 ACACCCTGTACTACCGCATC 59.178 55.000 0.00 0.00 0.00 3.91
288 289 0.104304 CACCCTGTACTACCGCATCC 59.896 60.000 0.00 0.00 0.00 3.51
289 290 0.324923 ACCCTGTACTACCGCATCCA 60.325 55.000 0.00 0.00 0.00 3.41
290 291 0.389391 CCCTGTACTACCGCATCCAG 59.611 60.000 0.00 0.00 0.00 3.86
291 292 0.249489 CCTGTACTACCGCATCCAGC 60.249 60.000 0.00 0.00 40.87 4.85
292 293 0.459899 CTGTACTACCGCATCCAGCA 59.540 55.000 0.00 0.00 46.13 4.41
293 294 0.174845 TGTACTACCGCATCCAGCAC 59.825 55.000 0.00 0.00 46.13 4.40
294 295 0.174845 GTACTACCGCATCCAGCACA 59.825 55.000 0.00 0.00 46.13 4.57
295 296 1.119684 TACTACCGCATCCAGCACAT 58.880 50.000 0.00 0.00 46.13 3.21
296 297 0.179073 ACTACCGCATCCAGCACATC 60.179 55.000 0.00 0.00 46.13 3.06
297 298 0.105593 CTACCGCATCCAGCACATCT 59.894 55.000 0.00 0.00 46.13 2.90
298 299 0.104855 TACCGCATCCAGCACATCTC 59.895 55.000 0.00 0.00 46.13 2.75
299 300 1.145598 CCGCATCCAGCACATCTCT 59.854 57.895 0.00 0.00 46.13 3.10
300 301 0.879400 CCGCATCCAGCACATCTCTC 60.879 60.000 0.00 0.00 46.13 3.20
301 302 1.213733 CGCATCCAGCACATCTCTCG 61.214 60.000 0.00 0.00 46.13 4.04
302 303 0.179089 GCATCCAGCACATCTCTCGT 60.179 55.000 0.00 0.00 44.79 4.18
303 304 1.067669 GCATCCAGCACATCTCTCGTA 59.932 52.381 0.00 0.00 44.79 3.43
304 305 2.481969 GCATCCAGCACATCTCTCGTAA 60.482 50.000 0.00 0.00 44.79 3.18
305 306 2.941453 TCCAGCACATCTCTCGTAAC 57.059 50.000 0.00 0.00 0.00 2.50
306 307 1.476891 TCCAGCACATCTCTCGTAACC 59.523 52.381 0.00 0.00 0.00 2.85
307 308 1.550065 CAGCACATCTCTCGTAACCG 58.450 55.000 0.00 0.00 0.00 4.44
308 309 0.179134 AGCACATCTCTCGTAACCGC 60.179 55.000 0.00 0.00 0.00 5.68
309 310 0.179134 GCACATCTCTCGTAACCGCT 60.179 55.000 0.00 0.00 0.00 5.52
310 311 1.550065 CACATCTCTCGTAACCGCTG 58.450 55.000 0.00 0.00 0.00 5.18
311 312 0.456221 ACATCTCTCGTAACCGCTGG 59.544 55.000 0.00 0.00 0.00 4.85
312 313 0.738975 CATCTCTCGTAACCGCTGGA 59.261 55.000 1.50 0.00 0.00 3.86
313 314 0.739561 ATCTCTCGTAACCGCTGGAC 59.260 55.000 1.50 0.00 0.00 4.02
314 315 1.226323 CTCTCGTAACCGCTGGACG 60.226 63.158 1.50 0.42 43.15 4.79
315 316 2.879462 CTCGTAACCGCTGGACGC 60.879 66.667 1.50 0.00 41.76 5.19
316 317 4.424566 TCGTAACCGCTGGACGCC 62.425 66.667 1.50 0.00 41.76 5.68
317 318 4.430765 CGTAACCGCTGGACGCCT 62.431 66.667 1.50 0.00 41.76 5.52
318 319 2.813908 GTAACCGCTGGACGCCTG 60.814 66.667 1.50 0.00 41.76 4.85
319 320 4.077184 TAACCGCTGGACGCCTGG 62.077 66.667 1.50 0.00 41.76 4.45
323 324 4.457496 CGCTGGACGCCTGGTGAT 62.457 66.667 15.34 0.00 34.21 3.06
324 325 2.900273 GCTGGACGCCTGGTGATA 59.100 61.111 15.34 0.00 0.00 2.15
325 326 1.521681 GCTGGACGCCTGGTGATAC 60.522 63.158 15.34 4.07 0.00 2.24
326 327 1.144057 CTGGACGCCTGGTGATACC 59.856 63.158 15.34 13.79 39.22 2.73
327 328 2.106332 GGACGCCTGGTGATACCG 59.894 66.667 15.34 0.45 42.58 4.02
328 329 2.718073 GGACGCCTGGTGATACCGT 61.718 63.158 15.34 4.19 42.58 4.83
329 330 1.518572 GACGCCTGGTGATACCGTG 60.519 63.158 15.34 0.00 42.58 4.94
330 331 1.940883 GACGCCTGGTGATACCGTGA 61.941 60.000 15.34 0.00 42.58 4.35
331 332 1.518572 CGCCTGGTGATACCGTGAC 60.519 63.158 0.00 0.00 42.58 3.67
332 333 1.153429 GCCTGGTGATACCGTGACC 60.153 63.158 0.00 0.00 42.58 4.02
333 334 1.895020 GCCTGGTGATACCGTGACCA 61.895 60.000 0.00 0.00 42.58 4.02
335 336 2.282827 TGGTGATACCGTGACCAGG 58.717 57.895 0.00 0.00 42.58 4.45
336 337 1.153429 GGTGATACCGTGACCAGGC 60.153 63.158 0.00 0.00 0.00 4.85
337 338 1.518572 GTGATACCGTGACCAGGCG 60.519 63.158 0.00 0.00 0.00 5.52
338 339 1.679641 TGATACCGTGACCAGGCGA 60.680 57.895 0.00 0.00 0.00 5.54
339 340 1.065928 GATACCGTGACCAGGCGAG 59.934 63.158 0.00 0.00 0.00 5.03
340 341 2.955751 GATACCGTGACCAGGCGAGC 62.956 65.000 0.00 0.00 0.00 5.03
359 360 3.202001 CGTCCGCGCCATGGAATT 61.202 61.111 18.40 0.00 37.23 2.17
360 361 2.760159 CGTCCGCGCCATGGAATTT 61.760 57.895 18.40 0.00 37.23 1.82
361 362 1.064134 GTCCGCGCCATGGAATTTC 59.936 57.895 18.40 0.00 37.23 2.17
362 363 2.118404 TCCGCGCCATGGAATTTCC 61.118 57.895 18.40 8.59 36.96 3.13
363 364 2.024588 CGCGCCATGGAATTTCCG 59.975 61.111 18.40 9.54 40.17 4.30
364 365 2.468670 CGCGCCATGGAATTTCCGA 61.469 57.895 18.40 1.01 40.17 4.55
365 366 1.785041 CGCGCCATGGAATTTCCGAT 61.785 55.000 18.40 3.25 40.17 4.18
366 367 0.040067 GCGCCATGGAATTTCCGATC 60.040 55.000 18.40 0.00 40.17 3.69
367 368 1.597742 CGCCATGGAATTTCCGATCT 58.402 50.000 18.40 0.00 40.17 2.75
368 369 2.766313 CGCCATGGAATTTCCGATCTA 58.234 47.619 18.40 0.00 40.17 1.98
369 370 3.138304 CGCCATGGAATTTCCGATCTAA 58.862 45.455 18.40 0.00 40.17 2.10
370 371 3.563808 CGCCATGGAATTTCCGATCTAAA 59.436 43.478 18.40 0.00 40.17 1.85
371 372 4.554723 CGCCATGGAATTTCCGATCTAAAC 60.555 45.833 18.40 0.00 40.17 2.01
372 373 4.554723 GCCATGGAATTTCCGATCTAAACG 60.555 45.833 18.40 0.00 40.17 3.60
373 374 4.527564 CATGGAATTTCCGATCTAAACGC 58.472 43.478 10.79 0.00 40.17 4.84
374 375 3.869065 TGGAATTTCCGATCTAAACGCT 58.131 40.909 10.79 0.00 40.17 5.07
375 376 3.869246 TGGAATTTCCGATCTAAACGCTC 59.131 43.478 10.79 0.00 40.17 5.03
376 377 4.120589 GGAATTTCCGATCTAAACGCTCT 58.879 43.478 0.00 0.00 0.00 4.09
377 378 4.571176 GGAATTTCCGATCTAAACGCTCTT 59.429 41.667 0.00 0.00 0.00 2.85
378 379 5.751990 GGAATTTCCGATCTAAACGCTCTTA 59.248 40.000 0.00 0.00 0.00 2.10
379 380 6.424207 GGAATTTCCGATCTAAACGCTCTTAT 59.576 38.462 0.00 0.00 0.00 1.73
380 381 7.597743 GGAATTTCCGATCTAAACGCTCTTATA 59.402 37.037 0.00 0.00 0.00 0.98
381 382 9.141400 GAATTTCCGATCTAAACGCTCTTATAT 57.859 33.333 0.00 0.00 0.00 0.86
382 383 9.490379 AATTTCCGATCTAAACGCTCTTATATT 57.510 29.630 0.00 0.00 0.00 1.28
384 385 9.622004 TTTCCGATCTAAACGCTCTTATATTAG 57.378 33.333 0.00 0.00 0.00 1.73
385 386 8.332996 TCCGATCTAAACGCTCTTATATTAGT 57.667 34.615 0.00 0.00 0.00 2.24
386 387 8.790718 TCCGATCTAAACGCTCTTATATTAGTT 58.209 33.333 0.00 0.00 0.00 2.24
387 388 9.408069 CCGATCTAAACGCTCTTATATTAGTTT 57.592 33.333 0.00 0.00 36.11 2.66
394 395 9.968870 AAACGCTCTTATATTAGTTTAGAGAGG 57.031 33.333 0.00 0.00 37.17 3.69
395 396 8.113173 ACGCTCTTATATTAGTTTAGAGAGGG 57.887 38.462 11.42 11.42 43.84 4.30
396 397 7.943447 ACGCTCTTATATTAGTTTAGAGAGGGA 59.057 37.037 17.60 0.00 42.07 4.20
397 398 8.455682 CGCTCTTATATTAGTTTAGAGAGGGAG 58.544 40.741 8.32 0.00 42.07 4.30
398 399 9.304335 GCTCTTATATTAGTTTAGAGAGGGAGT 57.696 37.037 0.00 0.00 35.48 3.85
403 404 6.969993 ATTAGTTTAGAGAGGGAGTAGCAG 57.030 41.667 0.00 0.00 0.00 4.24
404 405 4.325084 AGTTTAGAGAGGGAGTAGCAGT 57.675 45.455 0.00 0.00 0.00 4.40
405 406 4.679331 AGTTTAGAGAGGGAGTAGCAGTT 58.321 43.478 0.00 0.00 0.00 3.16
406 407 5.088026 AGTTTAGAGAGGGAGTAGCAGTTT 58.912 41.667 0.00 0.00 0.00 2.66
407 408 6.254522 AGTTTAGAGAGGGAGTAGCAGTTTA 58.745 40.000 0.00 0.00 0.00 2.01
408 409 6.898521 AGTTTAGAGAGGGAGTAGCAGTTTAT 59.101 38.462 0.00 0.00 0.00 1.40
409 410 8.060075 AGTTTAGAGAGGGAGTAGCAGTTTATA 58.940 37.037 0.00 0.00 0.00 0.98
410 411 8.693625 GTTTAGAGAGGGAGTAGCAGTTTATAA 58.306 37.037 0.00 0.00 0.00 0.98
411 412 9.435570 TTTAGAGAGGGAGTAGCAGTTTATAAT 57.564 33.333 0.00 0.00 0.00 1.28
435 436 6.823678 ATATCATCTTCGTTCACGTTTACC 57.176 37.500 0.00 0.00 40.80 2.85
443 444 2.658325 CGTTCACGTTTACCGGTTAGAG 59.342 50.000 15.04 5.23 42.24 2.43
451 452 0.179094 TACCGGTTAGAGCGCCAATG 60.179 55.000 15.04 0.00 37.85 2.82
452 453 1.449601 CCGGTTAGAGCGCCAATGT 60.450 57.895 2.29 0.00 37.85 2.71
483 484 0.597637 CCACGAGGCGTATGGATGTC 60.598 60.000 3.57 0.00 38.32 3.06
492 493 3.064820 GGCGTATGGATGTCGAAAAACAT 59.935 43.478 0.00 0.00 42.49 2.71
493 494 4.438200 GGCGTATGGATGTCGAAAAACATT 60.438 41.667 1.32 0.00 39.93 2.71
514 515 3.619233 TTTTACTGAAAACAGCTCGGC 57.381 42.857 0.00 0.00 29.38 5.54
526 527 2.437359 CTCGGCCCAAGAGCAAGG 60.437 66.667 0.00 0.00 0.00 3.61
539 540 4.796038 AGAGCAAGGGATGTTCAAAATG 57.204 40.909 0.00 0.00 41.36 2.32
580 583 0.469917 CCGGATAGCAACCCATCAGT 59.530 55.000 0.00 0.00 0.00 3.41
707 714 6.413783 AATTGTAGAAACCGACCCAAAAAT 57.586 33.333 0.00 0.00 0.00 1.82
713 720 8.422566 TGTAGAAACCGACCCAAAAATTAAAAT 58.577 29.630 0.00 0.00 0.00 1.82
796 803 2.047274 GCTACAGGCGCCTTGTGA 60.047 61.111 30.60 11.37 0.00 3.58
798 805 1.709147 GCTACAGGCGCCTTGTGATG 61.709 60.000 30.60 18.58 0.00 3.07
799 806 0.108186 CTACAGGCGCCTTGTGATGA 60.108 55.000 30.60 12.05 0.00 2.92
814 821 3.943381 TGTGATGAGAGATGCAATGGAAC 59.057 43.478 0.00 0.00 0.00 3.62
816 823 3.054213 TGATGAGAGATGCAATGGAACCA 60.054 43.478 0.00 0.00 0.00 3.67
828 835 4.152223 GCAATGGAACCATTTTAACACTGC 59.848 41.667 15.33 10.71 43.32 4.40
832 839 3.554129 GGAACCATTTTAACACTGCCACC 60.554 47.826 0.00 0.00 0.00 4.61
834 841 2.890945 ACCATTTTAACACTGCCACCTC 59.109 45.455 0.00 0.00 0.00 3.85
855 862 2.678324 GTAGATGCATCTACGGAAGCC 58.322 52.381 37.97 21.62 46.66 4.35
983 995 1.669115 CCACACCGAGAGCACCTTG 60.669 63.158 0.00 0.00 0.00 3.61
998 1010 3.234630 CTTGGTCCTTGGCCGACGA 62.235 63.158 0.00 0.00 0.00 4.20
1043 1055 4.779733 GGAGCCCCTGACGGAGGA 62.780 72.222 4.35 0.00 46.33 3.71
1370 1386 1.198178 CGCTCTAGATTACGCCTCTCC 59.802 57.143 0.00 0.00 0.00 3.71
1420 1436 2.667318 CGCCGTGTGATGTGTGACC 61.667 63.158 0.00 0.00 0.00 4.02
1638 1657 2.031333 GCAGCAAAGGTCTCTTCTGTTG 60.031 50.000 0.00 0.00 31.36 3.33
1639 1658 3.209410 CAGCAAAGGTCTCTTCTGTTGT 58.791 45.455 0.00 0.00 31.82 3.32
1640 1659 3.003068 CAGCAAAGGTCTCTTCTGTTGTG 59.997 47.826 0.00 0.00 31.82 3.33
1659 1678 7.227873 TGTTGTGAATTGGGAGTTGAGTATTA 58.772 34.615 0.00 0.00 0.00 0.98
1660 1679 7.888021 TGTTGTGAATTGGGAGTTGAGTATTAT 59.112 33.333 0.00 0.00 0.00 1.28
1661 1680 8.739972 GTTGTGAATTGGGAGTTGAGTATTATT 58.260 33.333 0.00 0.00 0.00 1.40
1662 1681 8.279970 TGTGAATTGGGAGTTGAGTATTATTG 57.720 34.615 0.00 0.00 0.00 1.90
1663 1682 7.339212 TGTGAATTGGGAGTTGAGTATTATTGG 59.661 37.037 0.00 0.00 0.00 3.16
1668 1687 6.591935 TGGGAGTTGAGTATTATTGGCTTAG 58.408 40.000 0.00 0.00 0.00 2.18
1842 1871 0.895530 CGGTTCTTCTGCTCTACCCA 59.104 55.000 0.00 0.00 0.00 4.51
1899 1928 3.058570 CGGAGACTGATATGTTCTCGGAG 60.059 52.174 0.00 0.00 32.02 4.63
1930 1959 8.089625 TGATCTCATATCCTTGGAAAGTTACA 57.910 34.615 0.00 0.00 44.25 2.41
1989 2018 7.828717 TGCATAGATACTTTCATCACAAAAGGA 59.171 33.333 0.00 0.00 37.91 3.36
2003 2032 5.072741 CACAAAAGGAAGAAGGAGGAATGA 58.927 41.667 0.00 0.00 0.00 2.57
2007 2036 7.613411 ACAAAAGGAAGAAGGAGGAATGAATAG 59.387 37.037 0.00 0.00 0.00 1.73
2012 2041 6.540551 GGAAGAAGGAGGAATGAATAGAACAC 59.459 42.308 0.00 0.00 0.00 3.32
2047 2076 8.250143 ACTTGGTTTCTTGAATTCCTGTTATT 57.750 30.769 2.27 0.00 0.00 1.40
2131 2160 1.009829 CACAAGGGACGCTATTGAGC 58.990 55.000 0.00 0.00 46.00 4.26
2236 2265 6.197276 CGCCTACAGATGATCAAATTTTCTG 58.803 40.000 17.74 17.74 39.70 3.02
2257 2286 4.682787 TGTATCTAAATGTCACGAGGCAG 58.317 43.478 0.00 0.00 0.00 4.85
2387 2564 4.220602 GGCCACATTCTGAAAATTGTAGGT 59.779 41.667 0.00 0.00 0.00 3.08
2388 2565 5.402398 GCCACATTCTGAAAATTGTAGGTC 58.598 41.667 0.00 0.00 0.00 3.85
2389 2566 5.622233 GCCACATTCTGAAAATTGTAGGTCC 60.622 44.000 0.00 0.00 0.00 4.46
2390 2567 5.711976 CCACATTCTGAAAATTGTAGGTCCT 59.288 40.000 0.00 0.00 0.00 3.85
2422 2602 2.758736 AGAAGTGGCAGACTCATGTC 57.241 50.000 0.00 0.00 43.22 3.06
2485 2665 6.762661 TCATCATTTTGATCATCGTTAGCAGA 59.237 34.615 0.00 0.00 34.28 4.26
2487 2667 7.376435 TCATTTTGATCATCGTTAGCAGAAA 57.624 32.000 0.00 0.00 0.00 2.52
2491 2671 7.841915 TTTGATCATCGTTAGCAGAAACATA 57.158 32.000 0.00 0.00 0.00 2.29
2537 2717 9.860898 ATCTTGAAATTTAACAAATCTGTAGGC 57.139 29.630 0.00 0.00 33.45 3.93
2562 2742 7.202016 TGTTTGCTCCTTCATTTACAACTAG 57.798 36.000 0.00 0.00 0.00 2.57
2649 2834 6.150140 GCACCTACAGATGTCAGATTTTCTTT 59.850 38.462 0.00 0.00 0.00 2.52
2660 2845 7.725251 TGTCAGATTTTCTTTTAAGTGGCATT 58.275 30.769 0.00 0.00 0.00 3.56
2664 2849 8.522830 CAGATTTTCTTTTAAGTGGCATTAGGA 58.477 33.333 0.00 0.00 0.00 2.94
2667 2852 7.589958 TTTCTTTTAAGTGGCATTAGGAACA 57.410 32.000 0.00 0.00 0.00 3.18
2682 2876 7.637229 CATTAGGAACATGCTTCATAGAACAG 58.363 38.462 0.00 0.00 0.00 3.16
2751 2945 9.912634 GACATTGTCCTTCTGATTTATTTTTCA 57.087 29.630 5.44 0.00 0.00 2.69
2752 2946 9.696917 ACATTGTCCTTCTGATTTATTTTTCAC 57.303 29.630 0.00 0.00 0.00 3.18
2808 3021 3.790126 ACTAAGTTTTGGGGGATGCAAT 58.210 40.909 0.00 0.00 0.00 3.56
2860 3076 7.994334 AGTAGTTAAGTGTTGTTGGTAAATGGA 59.006 33.333 0.00 0.00 0.00 3.41
2877 4505 8.515414 GGTAAATGGATTATCTGGCAATAGAAC 58.485 37.037 0.00 0.00 0.00 3.01
2878 4506 9.066892 GTAAATGGATTATCTGGCAATAGAACA 57.933 33.333 0.00 0.00 0.00 3.18
2890 4518 6.758254 TGGCAATAGAACATCGAGATGATAA 58.242 36.000 18.76 1.08 41.20 1.75
3002 4630 9.448294 GAGCTATTGACAATTCAGATTTCAATC 57.552 33.333 5.89 0.00 36.12 2.67
3030 4658 7.373778 TCATATTGATCAGCATTAGCATCAC 57.626 36.000 0.00 0.00 45.49 3.06
3031 4659 7.166167 TCATATTGATCAGCATTAGCATCACT 58.834 34.615 0.00 0.00 45.49 3.41
3045 4673 3.567164 AGCATCACTCAGTCCAGTTTTTG 59.433 43.478 0.00 0.00 0.00 2.44
3059 4687 8.966868 AGTCCAGTTTTTGAAGTTATCTTGAAA 58.033 29.630 0.00 0.00 35.62 2.69
3103 4731 6.942532 TTTGCTCTTTCATTCACAACTAGT 57.057 33.333 0.00 0.00 0.00 2.57
3145 4773 2.155924 GTCAGTACTTTGACGCAGCTTC 59.844 50.000 0.00 0.00 38.23 3.86
3180 4808 7.530426 AACTTTCTAGTTCCATTTCATTGCT 57.470 32.000 0.00 0.00 40.60 3.91
3181 4809 7.150783 ACTTTCTAGTTCCATTTCATTGCTC 57.849 36.000 0.00 0.00 0.00 4.26
3198 4826 4.551702 TGCTCTGCTGGTTAACTGATTA 57.448 40.909 5.42 0.00 0.00 1.75
3210 4838 9.740239 CTGGTTAACTGATTATTCCATTTGATG 57.260 33.333 5.42 0.00 29.89 3.07
3242 4870 3.834726 TGGCACACCGTTTTCCAG 58.165 55.556 0.00 0.00 39.70 3.86
3358 4986 1.983691 AGGGCAGCACAGCTATATCAT 59.016 47.619 0.00 0.00 36.40 2.45
3369 4997 8.249638 AGCACAGCTATATCATCAAGTATGTAG 58.750 37.037 0.00 0.00 36.99 2.74
3415 5043 7.700505 TCTCTACATTTACATACAGTACGGTG 58.299 38.462 9.06 0.00 30.91 4.94
3416 5044 7.337689 TCTCTACATTTACATACAGTACGGTGT 59.662 37.037 9.06 0.00 30.91 4.16
3417 5045 7.252708 TCTACATTTACATACAGTACGGTGTG 58.747 38.462 18.58 18.58 36.16 3.82
3419 5047 6.636705 ACATTTACATACAGTACGGTGTGAT 58.363 36.000 25.02 13.80 34.43 3.06
3420 5048 7.101054 ACATTTACATACAGTACGGTGTGATT 58.899 34.615 25.02 9.79 34.43 2.57
3421 5049 7.277098 ACATTTACATACAGTACGGTGTGATTC 59.723 37.037 25.02 0.00 34.43 2.52
3422 5050 4.794278 ACATACAGTACGGTGTGATTCA 57.206 40.909 25.02 0.00 34.43 2.57
3423 5051 4.491676 ACATACAGTACGGTGTGATTCAC 58.508 43.478 25.02 9.93 45.47 3.18
3432 5060 0.721718 GTGTGATTCACGGTGCTAGC 59.278 55.000 8.10 8.10 37.14 3.42
3433 5061 0.320050 TGTGATTCACGGTGCTAGCA 59.680 50.000 14.93 14.93 37.14 3.49
3434 5062 1.066215 TGTGATTCACGGTGCTAGCAT 60.066 47.619 22.51 1.84 37.14 3.79
3435 5063 2.009774 GTGATTCACGGTGCTAGCATT 58.990 47.619 22.51 5.61 0.00 3.56
3436 5064 2.030946 GTGATTCACGGTGCTAGCATTC 59.969 50.000 22.51 15.12 0.00 2.67
3437 5065 2.093500 TGATTCACGGTGCTAGCATTCT 60.093 45.455 22.51 2.74 0.00 2.40
3438 5066 2.010145 TTCACGGTGCTAGCATTCTC 57.990 50.000 22.51 7.67 0.00 2.87
3439 5067 1.186200 TCACGGTGCTAGCATTCTCT 58.814 50.000 22.51 0.00 0.00 3.10
3440 5068 1.550524 TCACGGTGCTAGCATTCTCTT 59.449 47.619 22.51 2.31 0.00 2.85
3441 5069 2.028112 TCACGGTGCTAGCATTCTCTTT 60.028 45.455 22.51 0.00 0.00 2.52
3442 5070 2.744202 CACGGTGCTAGCATTCTCTTTT 59.256 45.455 22.51 0.00 0.00 2.27
3443 5071 3.189287 CACGGTGCTAGCATTCTCTTTTT 59.811 43.478 22.51 0.00 0.00 1.94
3444 5072 3.437049 ACGGTGCTAGCATTCTCTTTTTC 59.563 43.478 22.51 3.24 0.00 2.29
3445 5073 3.484229 CGGTGCTAGCATTCTCTTTTTCG 60.484 47.826 22.51 8.29 0.00 3.46
3446 5074 3.684788 GGTGCTAGCATTCTCTTTTTCGA 59.315 43.478 22.51 0.00 0.00 3.71
3447 5075 4.154195 GGTGCTAGCATTCTCTTTTTCGAA 59.846 41.667 22.51 0.00 0.00 3.71
3448 5076 5.334879 GGTGCTAGCATTCTCTTTTTCGAAA 60.335 40.000 22.51 6.47 0.00 3.46
3449 5077 5.565638 GTGCTAGCATTCTCTTTTTCGAAAC 59.434 40.000 22.51 0.00 0.00 2.78
3450 5078 5.470098 TGCTAGCATTCTCTTTTTCGAAACT 59.530 36.000 14.93 3.69 0.00 2.66
3451 5079 6.017109 TGCTAGCATTCTCTTTTTCGAAACTT 60.017 34.615 14.93 0.00 0.00 2.66
3452 5080 6.521477 GCTAGCATTCTCTTTTTCGAAACTTC 59.479 38.462 10.79 0.00 0.00 3.01
3453 5081 6.625873 AGCATTCTCTTTTTCGAAACTTCT 57.374 33.333 10.79 0.00 0.00 2.85
3454 5082 7.730364 AGCATTCTCTTTTTCGAAACTTCTA 57.270 32.000 10.79 0.00 0.00 2.10
3455 5083 8.154649 AGCATTCTCTTTTTCGAAACTTCTAA 57.845 30.769 10.79 0.74 0.00 2.10
3456 5084 8.787852 AGCATTCTCTTTTTCGAAACTTCTAAT 58.212 29.630 10.79 5.72 0.00 1.73
3457 5085 8.844690 GCATTCTCTTTTTCGAAACTTCTAATG 58.155 33.333 10.79 16.96 0.00 1.90
3468 5096 6.256539 TCGAAACTTCTAATGATGCTGTGATC 59.743 38.462 0.00 0.00 0.00 2.92
3477 5105 3.538591 TGATGCTGTGATCCTGTCAATC 58.461 45.455 0.00 0.00 38.90 2.67
3482 5110 3.196463 CTGTGATCCTGTCAATCTCAGC 58.804 50.000 4.47 0.00 37.70 4.26
3489 5279 4.507710 TCCTGTCAATCTCAGCATGTAAC 58.492 43.478 0.00 0.00 37.40 2.50
3499 5289 9.223099 CAATCTCAGCATGTAACATATCCAATA 57.777 33.333 0.00 0.00 37.40 1.90
3505 5295 8.393366 CAGCATGTAACATATCCAATATGCTAC 58.607 37.037 0.00 11.13 45.66 3.58
3506 5296 8.324306 AGCATGTAACATATCCAATATGCTACT 58.676 33.333 15.89 5.25 45.59 2.57
3507 5297 9.599866 GCATGTAACATATCCAATATGCTACTA 57.400 33.333 15.89 7.77 45.05 1.82
3539 5329 5.300969 ACTACATTTACTGCAACATGCTG 57.699 39.130 7.55 7.55 45.31 4.41
3682 5472 4.999950 CAGCATAAAGACTACATCATCCCC 59.000 45.833 0.00 0.00 0.00 4.81
3700 5490 1.445582 CGCTGTACCTGGTCCGTTC 60.446 63.158 0.63 0.00 0.00 3.95
3713 5503 0.534203 TCCGTTCCTTCAACCTGTGC 60.534 55.000 0.00 0.00 0.00 4.57
3721 5511 4.072131 TCCTTCAACCTGTGCATACTTTC 58.928 43.478 0.00 0.00 0.00 2.62
3722 5512 3.820467 CCTTCAACCTGTGCATACTTTCA 59.180 43.478 0.00 0.00 0.00 2.69
3728 5518 4.655963 ACCTGTGCATACTTTCACATTCT 58.344 39.130 0.00 0.00 41.69 2.40
3749 5541 7.987268 TTCTTACGTATAGAATGCTTGACAG 57.013 36.000 12.97 0.00 0.00 3.51
3751 5543 7.544622 TCTTACGTATAGAATGCTTGACAGTT 58.455 34.615 0.00 0.00 0.00 3.16
3768 5560 7.094508 TGACAGTTTTCAGTGCAAATAAGAA 57.905 32.000 0.00 0.00 0.00 2.52
3786 5578 4.591321 AGAACTCCCATTAATTCCTGCA 57.409 40.909 0.00 0.00 0.00 4.41
3814 5606 5.102313 GTGTTCTTTGTGGTTTCAAGGAAG 58.898 41.667 4.68 0.00 41.53 3.46
3864 5656 3.078837 GGAATTGGTCTTTGCCGTAGAA 58.921 45.455 0.00 0.00 0.00 2.10
3874 5666 0.670546 TGCCGTAGAAGCTGCAGTTC 60.671 55.000 16.64 16.58 0.00 3.01
3895 5690 7.604164 CAGTTCAGTAGTTCAGTTCACCATATT 59.396 37.037 0.00 0.00 0.00 1.28
3896 5691 7.819900 AGTTCAGTAGTTCAGTTCACCATATTC 59.180 37.037 0.00 0.00 0.00 1.75
3897 5692 6.330278 TCAGTAGTTCAGTTCACCATATTCG 58.670 40.000 0.00 0.00 0.00 3.34
3898 5693 6.071560 TCAGTAGTTCAGTTCACCATATTCGT 60.072 38.462 0.00 0.00 0.00 3.85
3923 5718 0.250510 GAGGCTAAGGGTGCTATGGC 60.251 60.000 0.00 0.00 39.26 4.40
3925 5720 1.709994 GGCTAAGGGTGCTATGGCCT 61.710 60.000 3.32 0.00 37.74 5.19
3926 5721 1.056660 GCTAAGGGTGCTATGGCCTA 58.943 55.000 3.32 0.00 37.74 3.93
3927 5722 1.630878 GCTAAGGGTGCTATGGCCTAT 59.369 52.381 3.32 0.00 37.74 2.57
3928 5723 2.616510 GCTAAGGGTGCTATGGCCTATG 60.617 54.545 3.32 0.00 37.74 2.23
3929 5724 0.773644 AAGGGTGCTATGGCCTATGG 59.226 55.000 3.32 0.00 37.74 2.74
4021 5817 7.118825 TGAGAGAAGATGAGTTGTGCTTAATTG 59.881 37.037 0.00 0.00 0.00 2.32
4041 5837 1.388547 GCACTTGTGTGTCTCCCAAA 58.611 50.000 2.61 0.00 45.44 3.28
4055 5853 1.286553 TCCCAAAGTTCCAACCACTGT 59.713 47.619 0.00 0.00 0.00 3.55
4058 5856 3.430236 CCCAAAGTTCCAACCACTGTTTC 60.430 47.826 0.00 0.00 30.42 2.78
4063 5861 2.404923 TCCAACCACTGTTTCGTTGA 57.595 45.000 11.66 0.02 39.36 3.18
4065 5863 2.616376 TCCAACCACTGTTTCGTTGATG 59.384 45.455 11.66 0.52 39.36 3.07
4067 5865 0.951558 ACCACTGTTTCGTTGATGGC 59.048 50.000 0.00 0.00 0.00 4.40
4069 5867 1.197721 CCACTGTTTCGTTGATGGCTC 59.802 52.381 0.00 0.00 0.00 4.70
4070 5868 1.872952 CACTGTTTCGTTGATGGCTCA 59.127 47.619 0.00 0.00 0.00 4.26
4071 5869 2.096069 CACTGTTTCGTTGATGGCTCAG 60.096 50.000 0.00 0.00 31.68 3.35
4081 5896 1.207791 GATGGCTCAGGAGGGAGAAA 58.792 55.000 0.00 0.00 37.05 2.52
4145 5960 5.122711 GGCATGATTGAACTTTTTGGGATTG 59.877 40.000 0.00 0.00 0.00 2.67
4146 5961 5.702209 GCATGATTGAACTTTTTGGGATTGT 59.298 36.000 0.00 0.00 0.00 2.71
4147 5962 6.128472 GCATGATTGAACTTTTTGGGATTGTC 60.128 38.462 0.00 0.00 0.00 3.18
4148 5963 6.477053 TGATTGAACTTTTTGGGATTGTCA 57.523 33.333 0.00 0.00 0.00 3.58
4149 5964 7.065120 TGATTGAACTTTTTGGGATTGTCAT 57.935 32.000 0.00 0.00 0.00 3.06
4150 5965 6.930164 TGATTGAACTTTTTGGGATTGTCATG 59.070 34.615 0.00 0.00 0.00 3.07
4151 5966 6.477053 TTGAACTTTTTGGGATTGTCATGA 57.523 33.333 0.00 0.00 0.00 3.07
4152 5967 6.669125 TGAACTTTTTGGGATTGTCATGAT 57.331 33.333 0.00 0.00 0.00 2.45
4153 5968 6.690530 TGAACTTTTTGGGATTGTCATGATC 58.309 36.000 0.00 0.00 0.00 2.92
4154 5969 6.267242 TGAACTTTTTGGGATTGTCATGATCA 59.733 34.615 0.00 0.00 0.00 2.92
4155 5970 6.862469 ACTTTTTGGGATTGTCATGATCAT 57.138 33.333 1.18 1.18 0.00 2.45
4156 5971 7.959658 ACTTTTTGGGATTGTCATGATCATA 57.040 32.000 8.15 0.00 0.00 2.15
4157 5972 8.543293 ACTTTTTGGGATTGTCATGATCATAT 57.457 30.769 8.15 0.00 0.00 1.78
4158 5973 9.645128 ACTTTTTGGGATTGTCATGATCATATA 57.355 29.630 8.15 0.00 0.00 0.86
4182 5997 0.254178 CCTGCTGTTCTGTATGCCCT 59.746 55.000 0.00 0.00 0.00 5.19
4195 6013 6.291377 TCTGTATGCCCTGAATACTGATTTC 58.709 40.000 0.00 0.00 35.08 2.17
4202 6020 3.185188 CCTGAATACTGATTTCGATGCGG 59.815 47.826 0.00 0.00 0.00 5.69
4251 6069 6.589907 GGGCATGATTTAACTTTTTGGTACTG 59.410 38.462 0.00 0.00 0.00 2.74
4253 6071 6.868339 GCATGATTTAACTTTTTGGTACTGCT 59.132 34.615 0.00 0.00 0.00 4.24
4254 6072 7.062255 GCATGATTTAACTTTTTGGTACTGCTC 59.938 37.037 0.00 0.00 0.00 4.26
4255 6073 6.977213 TGATTTAACTTTTTGGTACTGCTCC 58.023 36.000 0.00 0.00 0.00 4.70
4257 6075 2.287977 ACTTTTTGGTACTGCTCCCC 57.712 50.000 0.00 0.00 0.00 4.81
4260 6078 0.250553 TTTTGGTACTGCTCCCCGTG 60.251 55.000 0.00 0.00 0.00 4.94
4261 6079 1.122632 TTTGGTACTGCTCCCCGTGA 61.123 55.000 0.00 0.00 0.00 4.35
4262 6080 1.122632 TTGGTACTGCTCCCCGTGAA 61.123 55.000 0.00 0.00 0.00 3.18
4265 6083 0.527817 GTACTGCTCCCCGTGAATCG 60.528 60.000 0.00 0.00 39.52 3.34
4268 6086 2.225791 CTGCTCCCCGTGAATCGTGA 62.226 60.000 0.00 0.00 37.94 4.35
4270 6088 0.387929 GCTCCCCGTGAATCGTGATA 59.612 55.000 0.00 0.00 37.94 2.15
4271 6089 1.000955 GCTCCCCGTGAATCGTGATAT 59.999 52.381 0.00 0.00 37.94 1.63
4272 6090 2.548067 GCTCCCCGTGAATCGTGATATT 60.548 50.000 0.00 0.00 37.94 1.28
4273 6091 3.318017 CTCCCCGTGAATCGTGATATTC 58.682 50.000 0.00 0.00 37.94 1.75
4275 6093 3.323691 TCCCCGTGAATCGTGATATTCAT 59.676 43.478 2.89 0.00 45.13 2.57
4276 6094 3.679980 CCCCGTGAATCGTGATATTCATC 59.320 47.826 2.89 0.00 45.13 2.92
4279 6097 4.386954 CCGTGAATCGTGATATTCATCCTG 59.613 45.833 2.89 0.00 45.13 3.86
4315 8001 1.069432 CGGTCGGTATCAGTATCACGG 60.069 57.143 0.00 0.00 0.00 4.94
4322 8008 3.244078 GGTATCAGTATCACGGCATCCAA 60.244 47.826 0.00 0.00 0.00 3.53
4326 8012 0.818040 GTATCACGGCATCCAACCCC 60.818 60.000 0.00 0.00 0.00 4.95
4327 8013 1.275421 TATCACGGCATCCAACCCCA 61.275 55.000 0.00 0.00 0.00 4.96
4328 8014 2.837031 ATCACGGCATCCAACCCCAC 62.837 60.000 0.00 0.00 0.00 4.61
4329 8015 3.575247 ACGGCATCCAACCCCACA 61.575 61.111 0.00 0.00 0.00 4.17
4330 8016 2.044053 CGGCATCCAACCCCACAT 60.044 61.111 0.00 0.00 0.00 3.21
4331 8017 1.225983 CGGCATCCAACCCCACATA 59.774 57.895 0.00 0.00 0.00 2.29
4332 8018 0.178992 CGGCATCCAACCCCACATAT 60.179 55.000 0.00 0.00 0.00 1.78
4338 8024 4.655963 CATCCAACCCCACATATAAGAGG 58.344 47.826 0.00 0.00 0.00 3.69
4366 8052 2.203280 TGGTGCGTTGGGACTTGG 60.203 61.111 0.00 0.00 34.50 3.61
4368 8054 2.983592 GTGCGTTGGGACTTGGGG 60.984 66.667 0.00 0.00 0.00 4.96
4480 8172 4.085517 GCGCAACGAAGACAAGATATCTAC 60.086 45.833 5.46 1.28 0.00 2.59
4481 8173 4.144902 CGCAACGAAGACAAGATATCTACG 59.855 45.833 5.46 3.09 0.00 3.51
4482 8174 4.085517 GCAACGAAGACAAGATATCTACGC 60.086 45.833 5.46 0.00 0.00 4.42
4483 8175 4.895224 ACGAAGACAAGATATCTACGCA 57.105 40.909 5.46 0.00 0.00 5.24
4484 8176 4.599047 ACGAAGACAAGATATCTACGCAC 58.401 43.478 5.46 0.00 0.00 5.34
4485 8177 3.975670 CGAAGACAAGATATCTACGCACC 59.024 47.826 5.46 0.00 0.00 5.01
4486 8178 3.627732 AGACAAGATATCTACGCACCG 57.372 47.619 5.46 0.00 0.00 4.94
4487 8179 2.052157 GACAAGATATCTACGCACCGC 58.948 52.381 5.46 0.00 0.00 5.68
4488 8180 1.407618 ACAAGATATCTACGCACCGCA 59.592 47.619 5.46 0.00 0.00 5.69
4489 8181 1.787155 CAAGATATCTACGCACCGCAC 59.213 52.381 5.46 0.00 0.00 5.34
4490 8182 0.314302 AGATATCTACGCACCGCACC 59.686 55.000 2.53 0.00 0.00 5.01
4491 8183 1.002250 GATATCTACGCACCGCACCG 61.002 60.000 0.00 0.00 0.00 4.94
4492 8184 3.761445 TATCTACGCACCGCACCGC 62.761 63.158 0.00 0.00 0.00 5.68
4517 8209 2.178521 CGCACCGAGCTACGAGTT 59.821 61.111 7.07 0.00 45.77 3.01
4523 8215 1.336609 ACCGAGCTACGAGTTGAAACC 60.337 52.381 7.07 0.00 45.77 3.27
4531 8223 3.249973 GAGTTGAAACCCGCCGTGC 62.250 63.158 0.00 0.00 0.00 5.34
4537 8229 4.524318 AACCCGCCGTGCCTATCG 62.524 66.667 0.00 0.00 0.00 2.92
4590 8282 1.077915 CGCGTTTATTACCACCCGTT 58.922 50.000 0.00 0.00 0.00 4.44
4604 8296 3.857157 ACCCGTTGGTGCTGATATATT 57.143 42.857 0.00 0.00 45.58 1.28
4611 8303 5.120830 CGTTGGTGCTGATATATTTAGGAGC 59.879 44.000 11.88 11.88 0.00 4.70
4612 8304 5.165961 TGGTGCTGATATATTTAGGAGCC 57.834 43.478 14.48 9.58 30.60 4.70
4613 8305 4.597075 TGGTGCTGATATATTTAGGAGCCA 59.403 41.667 14.48 11.19 30.60 4.75
4614 8306 5.073008 TGGTGCTGATATATTTAGGAGCCAA 59.927 40.000 14.48 1.09 30.60 4.52
4615 8307 5.645497 GGTGCTGATATATTTAGGAGCCAAG 59.355 44.000 9.15 0.00 0.00 3.61
4621 8313 2.603075 ATTTAGGAGCCAAGCCAACA 57.397 45.000 0.00 0.00 0.00 3.33
4622 8314 1.909700 TTTAGGAGCCAAGCCAACAG 58.090 50.000 0.00 0.00 0.00 3.16
4650 8348 2.807045 CGCTCGAGGCTGTGTCAC 60.807 66.667 15.58 0.00 39.13 3.67
4651 8349 2.653702 GCTCGAGGCTGTGTCACT 59.346 61.111 15.58 0.00 38.06 3.41
4652 8350 1.445238 GCTCGAGGCTGTGTCACTC 60.445 63.158 15.58 0.00 38.06 3.51
4653 8351 1.959848 CTCGAGGCTGTGTCACTCA 59.040 57.895 3.91 0.00 0.00 3.41
4654 8352 0.387878 CTCGAGGCTGTGTCACTCAC 60.388 60.000 3.91 0.00 46.31 3.51
4666 8364 3.066900 GTGTCACTCACAGTGTCAGTACT 59.933 47.826 0.00 0.00 46.03 2.73
4676 8374 5.455056 CAGTGTCAGTACTGGTCTTACTT 57.545 43.478 22.48 3.76 43.35 2.24
4678 8376 4.215827 AGTGTCAGTACTGGTCTTACTTCG 59.784 45.833 22.48 0.00 0.00 3.79
4679 8377 4.214971 GTGTCAGTACTGGTCTTACTTCGA 59.785 45.833 22.48 0.00 0.00 3.71
4680 8378 4.454847 TGTCAGTACTGGTCTTACTTCGAG 59.545 45.833 22.48 0.00 0.00 4.04
4681 8379 4.455190 GTCAGTACTGGTCTTACTTCGAGT 59.545 45.833 22.48 0.00 0.00 4.18
4784 8503 1.296715 GACGATGAAGGTGGTGGCT 59.703 57.895 0.00 0.00 0.00 4.75
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.053145 GTGAGCTTTGTCTTCCGATGATAT 58.947 41.667 0.00 0.00 0.00 1.63
1 2 4.433615 GTGAGCTTTGTCTTCCGATGATA 58.566 43.478 0.00 0.00 0.00 2.15
2 3 3.265791 GTGAGCTTTGTCTTCCGATGAT 58.734 45.455 0.00 0.00 0.00 2.45
3 4 2.688507 GTGAGCTTTGTCTTCCGATGA 58.311 47.619 0.00 0.00 0.00 2.92
4 5 1.391485 CGTGAGCTTTGTCTTCCGATG 59.609 52.381 0.00 0.00 0.00 3.84
5 6 1.272490 TCGTGAGCTTTGTCTTCCGAT 59.728 47.619 0.00 0.00 0.00 4.18
6 7 0.671796 TCGTGAGCTTTGTCTTCCGA 59.328 50.000 0.00 0.00 0.00 4.55
7 8 0.784778 GTCGTGAGCTTTGTCTTCCG 59.215 55.000 0.00 0.00 0.00 4.30
8 9 1.795286 CTGTCGTGAGCTTTGTCTTCC 59.205 52.381 0.00 0.00 0.00 3.46
9 10 2.728839 CTCTGTCGTGAGCTTTGTCTTC 59.271 50.000 0.00 0.00 0.00 2.87
10 11 2.362397 TCTCTGTCGTGAGCTTTGTCTT 59.638 45.455 0.00 0.00 34.29 3.01
11 12 1.957177 TCTCTGTCGTGAGCTTTGTCT 59.043 47.619 0.00 0.00 34.29 3.41
12 13 2.423926 TCTCTGTCGTGAGCTTTGTC 57.576 50.000 0.00 0.00 34.29 3.18
13 14 2.866762 GTTTCTCTGTCGTGAGCTTTGT 59.133 45.455 0.00 0.00 34.29 2.83
14 15 3.060003 CAGTTTCTCTGTCGTGAGCTTTG 60.060 47.826 0.00 0.00 39.17 2.77
15 16 3.126831 CAGTTTCTCTGTCGTGAGCTTT 58.873 45.455 0.00 0.00 39.17 3.51
16 17 2.362397 TCAGTTTCTCTGTCGTGAGCTT 59.638 45.455 0.00 0.00 43.97 3.74
17 18 1.957177 TCAGTTTCTCTGTCGTGAGCT 59.043 47.619 0.00 0.00 43.97 4.09
18 19 2.423926 TCAGTTTCTCTGTCGTGAGC 57.576 50.000 0.00 0.00 43.97 4.26
19 20 3.971150 ACTTCAGTTTCTCTGTCGTGAG 58.029 45.455 0.00 0.00 43.97 3.51
20 21 4.142249 TGAACTTCAGTTTCTCTGTCGTGA 60.142 41.667 0.00 0.00 43.97 4.35
21 22 4.112634 TGAACTTCAGTTTCTCTGTCGTG 58.887 43.478 0.00 0.00 43.97 4.35
22 23 4.363999 CTGAACTTCAGTTTCTCTGTCGT 58.636 43.478 10.27 0.00 43.97 4.34
23 24 4.963237 CTGAACTTCAGTTTCTCTGTCG 57.037 45.455 10.27 0.00 43.97 4.35
35 36 4.566004 CTGAATAACGGGACTGAACTTCA 58.434 43.478 0.00 0.00 0.00 3.02
36 37 3.371285 GCTGAATAACGGGACTGAACTTC 59.629 47.826 0.00 0.00 0.00 3.01
37 38 3.335579 GCTGAATAACGGGACTGAACTT 58.664 45.455 0.00 0.00 0.00 2.66
38 39 2.674177 CGCTGAATAACGGGACTGAACT 60.674 50.000 0.00 0.00 0.00 3.01
39 40 1.659098 CGCTGAATAACGGGACTGAAC 59.341 52.381 0.00 0.00 0.00 3.18
40 41 2.004583 CGCTGAATAACGGGACTGAA 57.995 50.000 0.00 0.00 0.00 3.02
41 42 0.459585 GCGCTGAATAACGGGACTGA 60.460 55.000 0.00 0.00 0.00 3.41
42 43 1.752501 CGCGCTGAATAACGGGACTG 61.753 60.000 5.56 0.00 44.04 3.51
43 44 1.518572 CGCGCTGAATAACGGGACT 60.519 57.895 5.56 0.00 44.04 3.85
44 45 2.522638 CCGCGCTGAATAACGGGAC 61.523 63.158 5.56 0.00 44.04 4.46
45 46 2.202824 CCGCGCTGAATAACGGGA 60.203 61.111 5.56 0.00 44.04 5.14
47 48 2.510691 ACCCGCGCTGAATAACGG 60.511 61.111 5.56 0.00 45.21 4.44
48 49 2.701006 CACCCGCGCTGAATAACG 59.299 61.111 5.56 0.00 0.00 3.18
49 50 2.469516 CCCACCCGCGCTGAATAAC 61.470 63.158 5.56 0.00 0.00 1.89
50 51 2.124901 CCCACCCGCGCTGAATAA 60.125 61.111 5.56 0.00 0.00 1.40
51 52 4.169696 CCCCACCCGCGCTGAATA 62.170 66.667 5.56 0.00 0.00 1.75
62 63 2.429235 TTAACCCCGCTTTCCCCACC 62.429 60.000 0.00 0.00 0.00 4.61
63 64 0.540133 TTTAACCCCGCTTTCCCCAC 60.540 55.000 0.00 0.00 0.00 4.61
64 65 0.410270 ATTTAACCCCGCTTTCCCCA 59.590 50.000 0.00 0.00 0.00 4.96
65 66 0.821517 CATTTAACCCCGCTTTCCCC 59.178 55.000 0.00 0.00 0.00 4.81
66 67 0.174845 GCATTTAACCCCGCTTTCCC 59.825 55.000 0.00 0.00 0.00 3.97
67 68 0.892063 TGCATTTAACCCCGCTTTCC 59.108 50.000 0.00 0.00 0.00 3.13
68 69 1.544246 ACTGCATTTAACCCCGCTTTC 59.456 47.619 0.00 0.00 0.00 2.62
69 70 1.627864 ACTGCATTTAACCCCGCTTT 58.372 45.000 0.00 0.00 0.00 3.51
70 71 1.272212 CAACTGCATTTAACCCCGCTT 59.728 47.619 0.00 0.00 0.00 4.68
71 72 0.887933 CAACTGCATTTAACCCCGCT 59.112 50.000 0.00 0.00 0.00 5.52
72 73 0.108851 CCAACTGCATTTAACCCCGC 60.109 55.000 0.00 0.00 0.00 6.13
73 74 1.067915 CACCAACTGCATTTAACCCCG 60.068 52.381 0.00 0.00 0.00 5.73
74 75 1.275010 CCACCAACTGCATTTAACCCC 59.725 52.381 0.00 0.00 0.00 4.95
75 76 1.967779 ACCACCAACTGCATTTAACCC 59.032 47.619 0.00 0.00 0.00 4.11
76 77 2.029380 GGACCACCAACTGCATTTAACC 60.029 50.000 0.00 0.00 35.97 2.85
77 78 2.351350 CGGACCACCAACTGCATTTAAC 60.351 50.000 0.00 0.00 35.59 2.01
78 79 1.883275 CGGACCACCAACTGCATTTAA 59.117 47.619 0.00 0.00 35.59 1.52
79 80 1.529226 CGGACCACCAACTGCATTTA 58.471 50.000 0.00 0.00 35.59 1.40
80 81 1.178534 CCGGACCACCAACTGCATTT 61.179 55.000 0.00 0.00 35.59 2.32
81 82 1.603455 CCGGACCACCAACTGCATT 60.603 57.895 0.00 0.00 35.59 3.56
82 83 2.034066 CCGGACCACCAACTGCAT 59.966 61.111 0.00 0.00 35.59 3.96
83 84 4.263572 CCCGGACCACCAACTGCA 62.264 66.667 0.73 0.00 35.59 4.41
99 100 3.691297 TAGAAGACGGGAGGGGGCC 62.691 68.421 0.00 0.00 0.00 5.80
100 101 2.042230 TAGAAGACGGGAGGGGGC 60.042 66.667 0.00 0.00 0.00 5.80
101 102 1.761271 GGTAGAAGACGGGAGGGGG 60.761 68.421 0.00 0.00 0.00 5.40
102 103 1.761271 GGGTAGAAGACGGGAGGGG 60.761 68.421 0.00 0.00 0.00 4.79
103 104 2.125961 CGGGTAGAAGACGGGAGGG 61.126 68.421 0.00 0.00 0.00 4.30
104 105 2.783288 GCGGGTAGAAGACGGGAGG 61.783 68.421 0.00 0.00 0.00 4.30
105 106 1.726533 GAGCGGGTAGAAGACGGGAG 61.727 65.000 0.00 0.00 0.00 4.30
106 107 1.751927 GAGCGGGTAGAAGACGGGA 60.752 63.158 0.00 0.00 0.00 5.14
107 108 2.783288 GGAGCGGGTAGAAGACGGG 61.783 68.421 0.00 0.00 0.00 5.28
108 109 2.050350 TGGAGCGGGTAGAAGACGG 61.050 63.158 0.00 0.00 0.00 4.79
109 110 1.139095 GTGGAGCGGGTAGAAGACG 59.861 63.158 0.00 0.00 0.00 4.18
110 111 1.516423 GGTGGAGCGGGTAGAAGAC 59.484 63.158 0.00 0.00 0.00 3.01
111 112 1.684734 GGGTGGAGCGGGTAGAAGA 60.685 63.158 0.00 0.00 0.00 2.87
112 113 2.901042 GGGTGGAGCGGGTAGAAG 59.099 66.667 0.00 0.00 0.00 2.85
113 114 3.072468 CGGGTGGAGCGGGTAGAA 61.072 66.667 0.00 0.00 0.00 2.10
114 115 2.497792 TAACGGGTGGAGCGGGTAGA 62.498 60.000 0.00 0.00 0.00 2.59
115 116 2.053865 TAACGGGTGGAGCGGGTAG 61.054 63.158 0.00 0.00 0.00 3.18
116 117 2.037049 TAACGGGTGGAGCGGGTA 59.963 61.111 0.00 0.00 0.00 3.69
117 118 3.698820 GTAACGGGTGGAGCGGGT 61.699 66.667 0.00 0.00 0.00 5.28
118 119 4.462280 GGTAACGGGTGGAGCGGG 62.462 72.222 0.00 0.00 0.00 6.13
119 120 3.026431 ATGGTAACGGGTGGAGCGG 62.026 63.158 0.00 0.00 42.51 5.52
120 121 1.813753 CATGGTAACGGGTGGAGCG 60.814 63.158 0.00 0.00 42.51 5.03
121 122 2.112815 GCATGGTAACGGGTGGAGC 61.113 63.158 0.00 0.00 42.51 4.70
122 123 1.451387 GGCATGGTAACGGGTGGAG 60.451 63.158 0.00 0.00 42.51 3.86
123 124 2.672295 GGCATGGTAACGGGTGGA 59.328 61.111 0.00 0.00 42.51 4.02
124 125 2.822255 CGGCATGGTAACGGGTGG 60.822 66.667 0.00 0.00 42.51 4.61
125 126 1.238625 AAACGGCATGGTAACGGGTG 61.239 55.000 0.00 0.00 42.51 4.61
126 127 1.073548 AAACGGCATGGTAACGGGT 59.926 52.632 0.00 0.00 42.51 5.28
127 128 1.504446 CAAACGGCATGGTAACGGG 59.496 57.895 0.00 0.00 42.51 5.28
128 129 1.154112 GCAAACGGCATGGTAACGG 60.154 57.895 0.00 0.00 43.97 4.44
129 130 4.450955 GCAAACGGCATGGTAACG 57.549 55.556 0.00 0.00 43.97 3.18
138 139 0.878416 TTGTGATAGGTGCAAACGGC 59.122 50.000 0.00 0.00 45.13 5.68
139 140 2.928694 GTTTGTGATAGGTGCAAACGG 58.071 47.619 0.00 0.00 41.28 4.44
141 142 3.619233 ACGTTTGTGATAGGTGCAAAC 57.381 42.857 8.72 8.72 44.77 2.93
142 143 3.628032 TCAACGTTTGTGATAGGTGCAAA 59.372 39.130 0.00 0.00 0.00 3.68
143 144 3.206964 TCAACGTTTGTGATAGGTGCAA 58.793 40.909 0.00 0.00 0.00 4.08
144 145 2.839975 TCAACGTTTGTGATAGGTGCA 58.160 42.857 0.00 0.00 0.00 4.57
145 146 4.390603 TGTATCAACGTTTGTGATAGGTGC 59.609 41.667 8.36 0.00 0.00 5.01
146 147 5.637810 ACTGTATCAACGTTTGTGATAGGTG 59.362 40.000 8.36 5.36 0.00 4.00
147 148 5.790593 ACTGTATCAACGTTTGTGATAGGT 58.209 37.500 8.36 8.00 0.00 3.08
148 149 6.255020 GGTACTGTATCAACGTTTGTGATAGG 59.745 42.308 8.36 7.51 0.00 2.57
149 150 6.809689 TGGTACTGTATCAACGTTTGTGATAG 59.190 38.462 8.36 3.59 0.00 2.08
150 151 6.689554 TGGTACTGTATCAACGTTTGTGATA 58.310 36.000 0.00 0.59 0.00 2.15
151 152 5.543714 TGGTACTGTATCAACGTTTGTGAT 58.456 37.500 0.00 1.72 0.00 3.06
152 153 4.946445 TGGTACTGTATCAACGTTTGTGA 58.054 39.130 0.00 0.00 0.00 3.58
153 154 5.660629 TTGGTACTGTATCAACGTTTGTG 57.339 39.130 9.37 0.00 0.00 3.33
154 155 5.007921 GGTTTGGTACTGTATCAACGTTTGT 59.992 40.000 12.82 0.00 0.00 2.83
155 156 5.445845 GGTTTGGTACTGTATCAACGTTTG 58.554 41.667 12.82 0.00 0.00 2.93
156 157 4.211794 CGGTTTGGTACTGTATCAACGTTT 59.788 41.667 12.82 0.00 0.00 3.60
157 158 3.742369 CGGTTTGGTACTGTATCAACGTT 59.258 43.478 12.82 0.00 0.00 3.99
158 159 3.319755 CGGTTTGGTACTGTATCAACGT 58.680 45.455 12.82 0.00 0.00 3.99
159 160 2.093152 GCGGTTTGGTACTGTATCAACG 59.907 50.000 12.82 14.35 35.43 4.10
160 161 2.417586 GGCGGTTTGGTACTGTATCAAC 59.582 50.000 12.82 8.46 35.43 3.18
161 162 2.702261 GGCGGTTTGGTACTGTATCAA 58.298 47.619 9.37 9.37 35.43 2.57
162 163 1.404449 CGGCGGTTTGGTACTGTATCA 60.404 52.381 0.00 0.00 35.43 2.15
163 164 1.283736 CGGCGGTTTGGTACTGTATC 58.716 55.000 0.00 0.00 35.43 2.24
164 165 0.609662 ACGGCGGTTTGGTACTGTAT 59.390 50.000 13.24 0.00 35.43 2.29
165 166 0.038343 GACGGCGGTTTGGTACTGTA 60.038 55.000 13.24 0.00 35.43 2.74
166 167 1.301165 GACGGCGGTTTGGTACTGT 60.301 57.895 13.24 0.00 35.43 3.55
167 168 0.881159 TTGACGGCGGTTTGGTACTG 60.881 55.000 13.24 0.00 36.13 2.74
168 169 0.179051 TTTGACGGCGGTTTGGTACT 60.179 50.000 13.24 0.00 0.00 2.73
169 170 0.041047 GTTTGACGGCGGTTTGGTAC 60.041 55.000 13.24 0.00 0.00 3.34
170 171 0.463295 TGTTTGACGGCGGTTTGGTA 60.463 50.000 13.24 0.00 0.00 3.25
171 172 1.313812 TTGTTTGACGGCGGTTTGGT 61.314 50.000 13.24 0.00 0.00 3.67
172 173 0.031449 ATTGTTTGACGGCGGTTTGG 59.969 50.000 13.24 0.00 0.00 3.28
173 174 1.127701 CATTGTTTGACGGCGGTTTG 58.872 50.000 13.24 0.00 0.00 2.93
174 175 0.741915 ACATTGTTTGACGGCGGTTT 59.258 45.000 13.24 0.00 0.00 3.27
175 176 0.309612 GACATTGTTTGACGGCGGTT 59.690 50.000 13.24 0.00 0.00 4.44
176 177 1.512156 GGACATTGTTTGACGGCGGT 61.512 55.000 13.24 0.00 0.00 5.68
177 178 1.209127 GGACATTGTTTGACGGCGG 59.791 57.895 13.24 0.00 0.00 6.13
178 179 0.165944 GAGGACATTGTTTGACGGCG 59.834 55.000 4.80 4.80 0.00 6.46
179 180 1.234821 TGAGGACATTGTTTGACGGC 58.765 50.000 0.00 0.00 0.00 5.68
180 181 3.253188 ACATTGAGGACATTGTTTGACGG 59.747 43.478 0.00 0.00 37.33 4.79
181 182 4.466828 GACATTGAGGACATTGTTTGACG 58.533 43.478 0.00 0.00 39.60 4.35
182 183 4.613622 CGGACATTGAGGACATTGTTTGAC 60.614 45.833 0.00 0.00 39.60 3.18
183 184 3.501828 CGGACATTGAGGACATTGTTTGA 59.498 43.478 0.00 0.00 39.60 2.69
184 185 3.253188 ACGGACATTGAGGACATTGTTTG 59.747 43.478 0.00 0.00 39.60 2.93
185 186 3.486383 ACGGACATTGAGGACATTGTTT 58.514 40.909 0.00 0.00 39.60 2.83
186 187 3.074412 GACGGACATTGAGGACATTGTT 58.926 45.455 0.00 0.00 39.60 2.83
187 188 2.303022 AGACGGACATTGAGGACATTGT 59.697 45.455 0.00 0.00 41.34 2.71
188 189 2.674852 CAGACGGACATTGAGGACATTG 59.325 50.000 0.00 0.00 34.71 2.82
189 190 2.936993 GCAGACGGACATTGAGGACATT 60.937 50.000 0.00 0.00 0.00 2.71
190 191 1.406069 GCAGACGGACATTGAGGACAT 60.406 52.381 0.00 0.00 0.00 3.06
191 192 0.037326 GCAGACGGACATTGAGGACA 60.037 55.000 0.00 0.00 0.00 4.02
192 193 0.037326 TGCAGACGGACATTGAGGAC 60.037 55.000 0.00 0.00 0.00 3.85
193 194 0.904649 ATGCAGACGGACATTGAGGA 59.095 50.000 0.00 0.00 0.00 3.71
194 195 1.012086 CATGCAGACGGACATTGAGG 58.988 55.000 0.00 0.00 0.00 3.86
195 196 0.376152 GCATGCAGACGGACATTGAG 59.624 55.000 14.21 0.00 0.00 3.02
196 197 1.026182 GGCATGCAGACGGACATTGA 61.026 55.000 21.36 0.00 0.00 2.57
197 198 1.430632 GGCATGCAGACGGACATTG 59.569 57.895 21.36 0.00 0.00 2.82
198 199 3.909662 GGCATGCAGACGGACATT 58.090 55.556 21.36 0.00 0.00 2.71
224 225 2.353607 CTAGACGGATGCGGCGAC 60.354 66.667 12.98 2.02 0.00 5.19
225 226 4.266070 GCTAGACGGATGCGGCGA 62.266 66.667 12.98 2.55 0.00 5.54
226 227 2.472232 TATGCTAGACGGATGCGGCG 62.472 60.000 12.44 0.51 0.00 6.46
227 228 1.009389 GTATGCTAGACGGATGCGGC 61.009 60.000 12.44 8.38 0.00 6.53
228 229 0.729478 CGTATGCTAGACGGATGCGG 60.729 60.000 12.44 0.00 43.65 5.69
229 230 2.713303 CGTATGCTAGACGGATGCG 58.287 57.895 4.58 4.58 42.19 4.73
230 231 0.318699 TGCGTATGCTAGACGGATGC 60.319 55.000 8.69 0.00 43.34 3.91
231 232 3.865700 TGCGTATGCTAGACGGATG 57.134 52.632 8.69 0.00 43.34 3.51
233 234 2.882927 AAATGCGTATGCTAGACGGA 57.117 45.000 8.69 0.00 44.87 4.69
234 235 5.591643 AATTAAATGCGTATGCTAGACGG 57.408 39.130 8.69 0.00 43.34 4.79
235 236 6.297641 CGAAAATTAAATGCGTATGCTAGACG 59.702 38.462 8.69 0.00 43.34 4.18
236 237 7.318205 GTCGAAAATTAAATGCGTATGCTAGAC 59.682 37.037 8.69 0.00 43.34 2.59
237 238 7.342194 GTCGAAAATTAAATGCGTATGCTAGA 58.658 34.615 8.69 0.00 43.34 2.43
238 239 6.573725 GGTCGAAAATTAAATGCGTATGCTAG 59.426 38.462 8.69 0.00 43.34 3.42
239 240 6.423862 GGTCGAAAATTAAATGCGTATGCTA 58.576 36.000 8.69 0.00 43.34 3.49
240 241 5.270853 GGTCGAAAATTAAATGCGTATGCT 58.729 37.500 8.69 0.00 43.34 3.79
241 242 4.144051 CGGTCGAAAATTAAATGCGTATGC 59.856 41.667 0.00 0.00 43.20 3.14
242 243 5.260140 ACGGTCGAAAATTAAATGCGTATG 58.740 37.500 0.00 0.00 0.00 2.39
243 244 5.473796 ACGGTCGAAAATTAAATGCGTAT 57.526 34.783 0.00 0.00 0.00 3.06
244 245 4.925061 ACGGTCGAAAATTAAATGCGTA 57.075 36.364 0.00 0.00 0.00 4.42
245 246 3.817148 ACGGTCGAAAATTAAATGCGT 57.183 38.095 0.00 0.00 0.00 5.24
246 247 4.489493 GTGTACGGTCGAAAATTAAATGCG 59.511 41.667 0.00 0.00 0.00 4.73
247 248 5.282076 GTGTGTACGGTCGAAAATTAAATGC 59.718 40.000 0.00 0.00 0.00 3.56
248 249 5.791480 GGTGTGTACGGTCGAAAATTAAATG 59.209 40.000 0.00 0.00 0.00 2.32
249 250 5.106594 GGGTGTGTACGGTCGAAAATTAAAT 60.107 40.000 0.00 0.00 0.00 1.40
250 251 4.213059 GGGTGTGTACGGTCGAAAATTAAA 59.787 41.667 0.00 0.00 0.00 1.52
251 252 3.745458 GGGTGTGTACGGTCGAAAATTAA 59.255 43.478 0.00 0.00 0.00 1.40
252 253 3.006752 AGGGTGTGTACGGTCGAAAATTA 59.993 43.478 0.00 0.00 0.00 1.40
253 254 2.145536 GGGTGTGTACGGTCGAAAATT 58.854 47.619 0.00 0.00 0.00 1.82
254 255 1.345415 AGGGTGTGTACGGTCGAAAAT 59.655 47.619 0.00 0.00 0.00 1.82
255 256 0.752054 AGGGTGTGTACGGTCGAAAA 59.248 50.000 0.00 0.00 0.00 2.29
256 257 0.032403 CAGGGTGTGTACGGTCGAAA 59.968 55.000 0.00 0.00 0.00 3.46
257 258 1.108727 ACAGGGTGTGTACGGTCGAA 61.109 55.000 0.00 0.00 37.75 3.71
258 259 0.250684 TACAGGGTGTGTACGGTCGA 60.251 55.000 0.00 0.00 40.94 4.20
259 260 2.256391 TACAGGGTGTGTACGGTCG 58.744 57.895 0.00 0.00 40.94 4.79
265 266 1.176527 GCGGTAGTACAGGGTGTGTA 58.823 55.000 2.06 0.00 40.94 2.90
266 267 0.828762 TGCGGTAGTACAGGGTGTGT 60.829 55.000 2.06 0.00 43.86 3.72
267 268 0.535335 ATGCGGTAGTACAGGGTGTG 59.465 55.000 2.06 0.00 0.00 3.82
268 269 0.822164 GATGCGGTAGTACAGGGTGT 59.178 55.000 2.06 0.00 0.00 4.16
269 270 0.104304 GGATGCGGTAGTACAGGGTG 59.896 60.000 2.06 0.00 0.00 4.61
270 271 0.324923 TGGATGCGGTAGTACAGGGT 60.325 55.000 2.06 0.00 0.00 4.34
271 272 0.389391 CTGGATGCGGTAGTACAGGG 59.611 60.000 2.06 0.00 0.00 4.45
272 273 0.249489 GCTGGATGCGGTAGTACAGG 60.249 60.000 2.06 0.00 0.00 4.00
273 274 0.459899 TGCTGGATGCGGTAGTACAG 59.540 55.000 2.06 0.00 46.63 2.74
274 275 0.174845 GTGCTGGATGCGGTAGTACA 59.825 55.000 2.06 0.00 46.63 2.90
275 276 0.174845 TGTGCTGGATGCGGTAGTAC 59.825 55.000 0.00 0.00 46.63 2.73
276 277 1.068588 GATGTGCTGGATGCGGTAGTA 59.931 52.381 0.00 0.00 46.63 1.82
277 278 0.179073 GATGTGCTGGATGCGGTAGT 60.179 55.000 0.00 0.00 46.63 2.73
278 279 0.105593 AGATGTGCTGGATGCGGTAG 59.894 55.000 0.00 0.00 46.63 3.18
279 280 0.104855 GAGATGTGCTGGATGCGGTA 59.895 55.000 0.00 0.00 46.63 4.02
280 281 1.153289 GAGATGTGCTGGATGCGGT 60.153 57.895 0.00 0.00 46.63 5.68
281 282 0.879400 GAGAGATGTGCTGGATGCGG 60.879 60.000 0.00 0.00 46.63 5.69
282 283 1.213733 CGAGAGATGTGCTGGATGCG 61.214 60.000 0.00 0.00 46.63 4.73
283 284 0.179089 ACGAGAGATGTGCTGGATGC 60.179 55.000 0.00 0.00 43.25 3.91
284 285 3.119291 GTTACGAGAGATGTGCTGGATG 58.881 50.000 0.00 0.00 0.00 3.51
285 286 2.101582 GGTTACGAGAGATGTGCTGGAT 59.898 50.000 0.00 0.00 0.00 3.41
286 287 1.476891 GGTTACGAGAGATGTGCTGGA 59.523 52.381 0.00 0.00 0.00 3.86
287 288 1.799181 CGGTTACGAGAGATGTGCTGG 60.799 57.143 0.00 0.00 44.60 4.85
288 289 1.550065 CGGTTACGAGAGATGTGCTG 58.450 55.000 0.00 0.00 44.60 4.41
289 290 0.179134 GCGGTTACGAGAGATGTGCT 60.179 55.000 0.00 0.00 44.60 4.40
290 291 0.179134 AGCGGTTACGAGAGATGTGC 60.179 55.000 0.00 0.00 44.60 4.57
291 292 1.550065 CAGCGGTTACGAGAGATGTG 58.450 55.000 0.00 0.00 44.60 3.21
292 293 0.456221 CCAGCGGTTACGAGAGATGT 59.544 55.000 0.00 0.00 44.60 3.06
293 294 0.738975 TCCAGCGGTTACGAGAGATG 59.261 55.000 0.00 0.00 44.60 2.90
294 295 0.739561 GTCCAGCGGTTACGAGAGAT 59.260 55.000 0.00 0.00 44.60 2.75
295 296 1.642037 CGTCCAGCGGTTACGAGAGA 61.642 60.000 12.56 0.00 44.60 3.10
296 297 1.226323 CGTCCAGCGGTTACGAGAG 60.226 63.158 12.56 0.00 44.60 3.20
297 298 2.872557 CGTCCAGCGGTTACGAGA 59.127 61.111 12.56 0.00 44.60 4.04
298 299 2.879462 GCGTCCAGCGGTTACGAG 60.879 66.667 19.93 0.00 44.60 4.18
307 308 2.925162 GGTATCACCAGGCGTCCAGC 62.925 65.000 0.00 0.00 41.18 4.85
308 309 1.144057 GGTATCACCAGGCGTCCAG 59.856 63.158 0.00 0.00 38.42 3.86
309 310 2.717044 CGGTATCACCAGGCGTCCA 61.717 63.158 0.00 0.00 38.47 4.02
310 311 2.106332 CGGTATCACCAGGCGTCC 59.894 66.667 0.00 0.00 38.47 4.79
311 312 1.518572 CACGGTATCACCAGGCGTC 60.519 63.158 0.00 0.00 38.47 5.19
312 313 1.980232 TCACGGTATCACCAGGCGT 60.980 57.895 0.00 0.00 38.47 5.68
313 314 1.518572 GTCACGGTATCACCAGGCG 60.519 63.158 0.00 0.00 38.47 5.52
314 315 1.153429 GGTCACGGTATCACCAGGC 60.153 63.158 0.00 0.00 38.47 4.85
315 316 2.282827 TGGTCACGGTATCACCAGG 58.717 57.895 2.49 0.00 38.47 4.45
317 318 1.895020 GCCTGGTCACGGTATCACCA 61.895 60.000 0.00 5.84 38.47 4.17
318 319 1.153429 GCCTGGTCACGGTATCACC 60.153 63.158 0.00 0.00 34.05 4.02
319 320 1.518572 CGCCTGGTCACGGTATCAC 60.519 63.158 0.00 0.00 0.00 3.06
320 321 1.663379 CTCGCCTGGTCACGGTATCA 61.663 60.000 0.00 0.00 0.00 2.15
321 322 1.065928 CTCGCCTGGTCACGGTATC 59.934 63.158 0.00 0.00 0.00 2.24
322 323 3.077519 GCTCGCCTGGTCACGGTAT 62.078 63.158 0.00 0.00 0.00 2.73
323 324 3.755628 GCTCGCCTGGTCACGGTA 61.756 66.667 0.00 0.00 0.00 4.02
342 343 2.646799 GAAATTCCATGGCGCGGACG 62.647 60.000 8.83 0.00 44.07 4.79
343 344 1.064134 GAAATTCCATGGCGCGGAC 59.936 57.895 8.83 0.00 30.29 4.79
344 345 2.118404 GGAAATTCCATGGCGCGGA 61.118 57.895 8.83 0.00 36.28 5.54
345 346 2.412937 GGAAATTCCATGGCGCGG 59.587 61.111 8.83 0.00 36.28 6.46
346 347 1.785041 ATCGGAAATTCCATGGCGCG 61.785 55.000 13.04 0.00 35.91 6.86
347 348 0.040067 GATCGGAAATTCCATGGCGC 60.040 55.000 13.04 0.00 35.91 6.53
348 349 1.597742 AGATCGGAAATTCCATGGCG 58.402 50.000 13.04 3.59 35.91 5.69
349 350 4.554723 CGTTTAGATCGGAAATTCCATGGC 60.555 45.833 13.04 0.00 35.91 4.40
350 351 4.554723 GCGTTTAGATCGGAAATTCCATGG 60.555 45.833 13.04 4.97 35.91 3.66
351 352 4.273480 AGCGTTTAGATCGGAAATTCCATG 59.727 41.667 13.04 0.00 35.91 3.66
352 353 4.451900 AGCGTTTAGATCGGAAATTCCAT 58.548 39.130 13.04 4.87 35.91 3.41
353 354 3.869065 AGCGTTTAGATCGGAAATTCCA 58.131 40.909 13.04 0.00 35.91 3.53
354 355 4.120589 AGAGCGTTTAGATCGGAAATTCC 58.879 43.478 0.99 0.99 40.85 3.01
355 356 5.720261 AAGAGCGTTTAGATCGGAAATTC 57.280 39.130 0.04 0.00 40.85 2.17
356 357 9.490379 AATATAAGAGCGTTTAGATCGGAAATT 57.510 29.630 0.04 0.00 40.85 1.82
358 359 9.622004 CTAATATAAGAGCGTTTAGATCGGAAA 57.378 33.333 0.00 0.00 40.85 3.13
359 360 8.790718 ACTAATATAAGAGCGTTTAGATCGGAA 58.209 33.333 0.00 0.00 40.85 4.30
360 361 8.332996 ACTAATATAAGAGCGTTTAGATCGGA 57.667 34.615 0.00 0.00 40.85 4.55
361 362 8.967552 AACTAATATAAGAGCGTTTAGATCGG 57.032 34.615 0.00 0.00 40.85 4.18
368 369 9.968870 CCTCTCTAAACTAATATAAGAGCGTTT 57.031 33.333 0.00 0.00 34.89 3.60
369 370 8.578151 CCCTCTCTAAACTAATATAAGAGCGTT 58.422 37.037 0.00 0.00 34.89 4.84
370 371 7.943447 TCCCTCTCTAAACTAATATAAGAGCGT 59.057 37.037 0.00 0.00 34.89 5.07
371 372 8.338072 TCCCTCTCTAAACTAATATAAGAGCG 57.662 38.462 0.00 0.00 34.89 5.03
372 373 9.304335 ACTCCCTCTCTAAACTAATATAAGAGC 57.696 37.037 0.00 0.00 34.89 4.09
377 378 9.742144 CTGCTACTCCCTCTCTAAACTAATATA 57.258 37.037 0.00 0.00 0.00 0.86
378 379 8.228905 ACTGCTACTCCCTCTCTAAACTAATAT 58.771 37.037 0.00 0.00 0.00 1.28
379 380 7.584532 ACTGCTACTCCCTCTCTAAACTAATA 58.415 38.462 0.00 0.00 0.00 0.98
380 381 6.436890 ACTGCTACTCCCTCTCTAAACTAAT 58.563 40.000 0.00 0.00 0.00 1.73
381 382 5.828871 ACTGCTACTCCCTCTCTAAACTAA 58.171 41.667 0.00 0.00 0.00 2.24
382 383 5.453866 ACTGCTACTCCCTCTCTAAACTA 57.546 43.478 0.00 0.00 0.00 2.24
383 384 4.325084 ACTGCTACTCCCTCTCTAAACT 57.675 45.455 0.00 0.00 0.00 2.66
384 385 5.408880 AAACTGCTACTCCCTCTCTAAAC 57.591 43.478 0.00 0.00 0.00 2.01
385 386 8.834004 TTATAAACTGCTACTCCCTCTCTAAA 57.166 34.615 0.00 0.00 0.00 1.85
409 410 8.975439 GGTAAACGTGAACGAAGATGATATATT 58.025 33.333 10.26 0.00 43.02 1.28
410 411 7.325338 CGGTAAACGTGAACGAAGATGATATAT 59.675 37.037 10.26 0.00 43.02 0.86
411 412 6.634035 CGGTAAACGTGAACGAAGATGATATA 59.366 38.462 10.26 0.00 43.02 0.86
412 413 5.457799 CGGTAAACGTGAACGAAGATGATAT 59.542 40.000 10.26 0.00 43.02 1.63
413 414 4.794762 CGGTAAACGTGAACGAAGATGATA 59.205 41.667 10.26 0.00 43.02 2.15
414 415 3.611113 CGGTAAACGTGAACGAAGATGAT 59.389 43.478 10.26 0.00 43.02 2.45
415 416 2.981805 CGGTAAACGTGAACGAAGATGA 59.018 45.455 10.26 0.00 43.02 2.92
416 417 2.091588 CCGGTAAACGTGAACGAAGATG 59.908 50.000 10.26 0.00 43.02 2.90
417 418 2.288395 ACCGGTAAACGTGAACGAAGAT 60.288 45.455 4.49 0.00 43.02 2.40
418 419 1.066908 ACCGGTAAACGTGAACGAAGA 59.933 47.619 4.49 0.00 43.02 2.87
419 420 1.490621 ACCGGTAAACGTGAACGAAG 58.509 50.000 4.49 0.00 43.02 3.79
420 421 1.933247 AACCGGTAAACGTGAACGAA 58.067 45.000 8.00 0.00 43.02 3.85
421 422 2.292016 TCTAACCGGTAAACGTGAACGA 59.708 45.455 8.00 0.00 43.02 3.85
422 423 2.658325 CTCTAACCGGTAAACGTGAACG 59.342 50.000 8.00 0.40 46.33 3.95
423 424 2.409715 GCTCTAACCGGTAAACGTGAAC 59.590 50.000 8.00 0.00 42.24 3.18
424 425 2.676076 GCTCTAACCGGTAAACGTGAA 58.324 47.619 8.00 0.00 42.24 3.18
425 426 1.401409 CGCTCTAACCGGTAAACGTGA 60.401 52.381 8.00 0.00 42.24 4.35
426 427 0.986992 CGCTCTAACCGGTAAACGTG 59.013 55.000 8.00 0.00 42.24 4.49
427 428 0.733909 GCGCTCTAACCGGTAAACGT 60.734 55.000 8.00 0.00 42.24 3.99
428 429 1.416050 GGCGCTCTAACCGGTAAACG 61.416 60.000 8.00 9.36 43.80 3.60
435 436 0.802494 AAACATTGGCGCTCTAACCG 59.198 50.000 7.64 0.00 0.00 4.44
466 467 1.099295 TCGACATCCATACGCCTCGT 61.099 55.000 0.00 0.00 44.35 4.18
472 473 7.561237 AAAAATGTTTTTCGACATCCATACG 57.439 32.000 0.00 0.00 39.25 3.06
514 515 1.272092 TGAACATCCCTTGCTCTTGGG 60.272 52.381 0.00 0.00 44.66 4.12
550 551 5.449999 GGGTTGCTATCCGGATTTACTTTTG 60.450 44.000 24.71 0.00 0.00 2.44
555 556 3.202829 TGGGTTGCTATCCGGATTTAC 57.797 47.619 24.71 14.66 0.00 2.01
556 557 3.392947 TGATGGGTTGCTATCCGGATTTA 59.607 43.478 24.71 4.17 0.00 1.40
559 560 1.349026 CTGATGGGTTGCTATCCGGAT 59.651 52.381 22.95 22.95 0.00 4.18
580 583 6.183361 TGGTACCACTGAAGGAAAATGAACTA 60.183 38.462 11.60 0.00 0.00 2.24
615 618 6.248420 CGAGTGGTATTTTGCACTAATTTTCG 59.752 38.462 0.00 0.00 0.00 3.46
686 693 5.855740 AATTTTTGGGTCGGTTTCTACAA 57.144 34.783 0.00 0.00 0.00 2.41
695 702 6.527089 GCGTTAATTTTAATTTTTGGGTCGG 58.473 36.000 0.00 0.00 0.00 4.79
707 714 3.374678 CCTACCTGGCGCGTTAATTTTAA 59.625 43.478 8.43 0.00 0.00 1.52
713 720 2.580276 CCCTACCTGGCGCGTTAA 59.420 61.111 8.43 0.00 0.00 2.01
796 803 3.657398 TGGTTCCATTGCATCTCTCAT 57.343 42.857 0.00 0.00 0.00 2.90
798 805 4.996788 AAATGGTTCCATTGCATCTCTC 57.003 40.909 16.42 0.00 36.84 3.20
799 806 6.211184 TGTTAAAATGGTTCCATTGCATCTCT 59.789 34.615 16.42 0.00 36.84 3.10
814 821 2.095263 CGAGGTGGCAGTGTTAAAATGG 60.095 50.000 0.00 0.00 0.00 3.16
816 823 2.858745 ACGAGGTGGCAGTGTTAAAAT 58.141 42.857 0.00 0.00 0.00 1.82
828 835 3.290308 GTAGATGCATCTACGAGGTGG 57.710 52.381 37.97 0.00 46.66 4.61
855 862 2.161609 GGTTTGTGCTCCGTCCAAATAG 59.838 50.000 0.00 0.00 31.44 1.73
968 980 1.374758 GACCAAGGTGCTCTCGGTG 60.375 63.158 0.00 0.00 0.00 4.94
983 995 3.310860 ATGTCGTCGGCCAAGGACC 62.311 63.158 13.74 0.00 34.04 4.46
984 996 2.100631 CATGTCGTCGGCCAAGGAC 61.101 63.158 9.63 9.63 35.22 3.85
985 997 2.264480 CATGTCGTCGGCCAAGGA 59.736 61.111 2.24 0.00 0.00 3.36
998 1010 2.827190 CCATCAGCAGCGCCATGT 60.827 61.111 2.29 0.00 0.00 3.21
1043 1055 3.382832 CCAGGTCGGCCTTCTCGT 61.383 66.667 5.38 0.00 44.18 4.18
1064 1076 3.957535 CCTTGATGGCGGCGATGC 61.958 66.667 12.98 0.00 0.00 3.91
1305 1317 2.285743 AGGTTGGAGGGGGAGAGC 60.286 66.667 0.00 0.00 0.00 4.09
1346 1358 2.698432 GCGTAATCTAGAGCGCGCG 61.698 63.158 28.44 28.44 40.46 6.86
1347 1359 3.139261 GCGTAATCTAGAGCGCGC 58.861 61.111 26.66 26.66 40.46 6.86
1350 1362 1.198178 GGAGAGGCGTAATCTAGAGCG 59.802 57.143 0.00 4.27 0.00 5.03
1351 1363 2.227865 CAGGAGAGGCGTAATCTAGAGC 59.772 54.545 0.00 0.00 0.00 4.09
1352 1364 2.227865 GCAGGAGAGGCGTAATCTAGAG 59.772 54.545 0.00 0.00 0.00 2.43
1353 1365 2.158593 AGCAGGAGAGGCGTAATCTAGA 60.159 50.000 0.00 0.00 36.08 2.43
1370 1386 3.504863 CAAATCCGACAAATTGGAGCAG 58.495 45.455 0.00 0.00 42.11 4.24
1420 1436 3.188786 GCGCCTGGCTACACGAAG 61.189 66.667 17.92 0.00 39.11 3.79
1638 1657 7.682021 GCCAATAATACTCAACTCCCAATTCAC 60.682 40.741 0.00 0.00 0.00 3.18
1639 1658 6.321181 GCCAATAATACTCAACTCCCAATTCA 59.679 38.462 0.00 0.00 0.00 2.57
1640 1659 6.547510 AGCCAATAATACTCAACTCCCAATTC 59.452 38.462 0.00 0.00 0.00 2.17
1659 1678 4.079253 ACATCGGAAAACACTAAGCCAAT 58.921 39.130 0.00 0.00 0.00 3.16
1660 1679 3.252215 CACATCGGAAAACACTAAGCCAA 59.748 43.478 0.00 0.00 0.00 4.52
1661 1680 2.811431 CACATCGGAAAACACTAAGCCA 59.189 45.455 0.00 0.00 0.00 4.75
1662 1681 2.812011 ACACATCGGAAAACACTAAGCC 59.188 45.455 0.00 0.00 0.00 4.35
1663 1682 3.250040 ACACACATCGGAAAACACTAAGC 59.750 43.478 0.00 0.00 0.00 3.09
1668 1687 3.896648 ATCACACACATCGGAAAACAC 57.103 42.857 0.00 0.00 0.00 3.32
1761 1790 2.722201 CCCGGTCAGCTCCTGGTAC 61.722 68.421 0.00 0.00 31.51 3.34
1824 1853 2.167487 CTCTGGGTAGAGCAGAAGAACC 59.833 54.545 0.00 0.00 43.62 3.62
1842 1871 0.678366 AGTCGCTCGACATGACCTCT 60.678 55.000 22.18 0.00 46.76 3.69
1899 1928 4.070716 CCAAGGATATGAGATCAAGGTGC 58.929 47.826 0.00 0.00 0.00 5.01
1957 1986 9.143631 TGTGATGAAAGTATCTATGCATATTCG 57.856 33.333 6.92 0.00 0.00 3.34
1987 2016 6.540551 GTGTTCTATTCATTCCTCCTTCTTCC 59.459 42.308 0.00 0.00 0.00 3.46
1989 2018 7.020827 TGTGTTCTATTCATTCCTCCTTCTT 57.979 36.000 0.00 0.00 0.00 2.52
2003 2032 9.959721 AACCAAGTAATGTATCTGTGTTCTATT 57.040 29.630 0.00 0.00 0.00 1.73
2007 2036 8.324163 AGAAACCAAGTAATGTATCTGTGTTC 57.676 34.615 0.00 0.00 0.00 3.18
2047 2076 9.996554 TTCTGAGAACATGTTTGATAGTTAAGA 57.003 29.630 13.36 3.83 0.00 2.10
2106 2135 0.970640 TAGCGTCCCTTGTGTAAGCA 59.029 50.000 0.00 0.00 32.40 3.91
2131 2160 6.910433 GTGTGTAAACAAACCTGACAATACAG 59.090 38.462 0.00 0.00 37.61 2.74
2236 2265 4.051922 CCTGCCTCGTGACATTTAGATAC 58.948 47.826 0.00 0.00 0.00 2.24
2257 2286 4.537135 TGTATGAAGAGGTTGTGACTCC 57.463 45.455 0.00 0.00 35.58 3.85
2387 2564 6.551601 TGCCACTTCTAAAATTGGTAAAAGGA 59.448 34.615 0.00 0.00 37.49 3.36
2388 2565 6.754193 TGCCACTTCTAAAATTGGTAAAAGG 58.246 36.000 0.00 0.00 37.49 3.11
2389 2566 7.595130 GTCTGCCACTTCTAAAATTGGTAAAAG 59.405 37.037 0.00 0.00 37.49 2.27
2390 2567 7.286775 AGTCTGCCACTTCTAAAATTGGTAAAA 59.713 33.333 0.00 0.00 37.49 1.52
2422 2602 9.780413 GAATTTTCAATAGCTCCTAGTTTTCTG 57.220 33.333 0.00 0.00 0.00 3.02
2485 2665 7.404671 ACTTCAAAAACTGGACTGTATGTTT 57.595 32.000 0.00 0.00 34.59 2.83
2487 2667 8.691661 ATAACTTCAAAAACTGGACTGTATGT 57.308 30.769 0.00 0.00 0.00 2.29
2491 2671 7.556275 TCAAGATAACTTCAAAAACTGGACTGT 59.444 33.333 0.00 0.00 33.70 3.55
2537 2717 6.076981 AGTTGTAAATGAAGGAGCAAACAG 57.923 37.500 0.00 0.00 0.00 3.16
2636 2821 9.346725 CTAATGCCACTTAAAAGAAAATCTGAC 57.653 33.333 0.00 0.00 0.00 3.51
2649 2834 4.981806 GCATGTTCCTAATGCCACTTAA 57.018 40.909 0.00 0.00 43.78 1.85
2660 2845 6.299805 ACTGTTCTATGAAGCATGTTCCTA 57.700 37.500 0.00 0.00 0.00 2.94
2664 2849 8.165239 TGTTTTACTGTTCTATGAAGCATGTT 57.835 30.769 0.00 0.00 0.00 2.71
2667 2852 8.507249 GTTCTGTTTTACTGTTCTATGAAGCAT 58.493 33.333 0.00 0.00 0.00 3.79
2682 2876 4.757149 AGAGGCATCAGTGTTCTGTTTTAC 59.243 41.667 0.00 0.00 41.91 2.01
2779 2990 5.209659 TCCCCCAAAACTTAGTAGCAAAAA 58.790 37.500 0.00 0.00 0.00 1.94
2860 3076 6.997655 TCTCGATGTTCTATTGCCAGATAAT 58.002 36.000 0.00 0.00 0.00 1.28
2877 4505 5.647658 AGAGGCTAGAGTTATCATCTCGATG 59.352 44.000 0.00 0.45 40.09 3.84
2878 4506 5.647658 CAGAGGCTAGAGTTATCATCTCGAT 59.352 44.000 0.00 0.00 37.07 3.59
3002 4630 8.678593 ATGCTAATGCTGATCAATATGATAGG 57.321 34.615 0.00 0.00 37.37 2.57
3010 4638 5.374071 TGAGTGATGCTAATGCTGATCAAT 58.626 37.500 0.00 0.00 40.48 2.57
3018 4646 2.871022 CTGGACTGAGTGATGCTAATGC 59.129 50.000 0.00 0.00 40.20 3.56
3030 4658 7.736447 AGATAACTTCAAAAACTGGACTGAG 57.264 36.000 0.00 0.00 0.00 3.35
3031 4659 7.773224 TCAAGATAACTTCAAAAACTGGACTGA 59.227 33.333 0.00 0.00 33.70 3.41
3059 4687 9.341078 AGCAAAAATCCTACAAATTTGTGAAAT 57.659 25.926 29.72 17.70 42.31 2.17
3070 4698 7.867403 GTGAATGAAAGAGCAAAAATCCTACAA 59.133 33.333 0.00 0.00 0.00 2.41
3103 4731 8.318412 ACTGACAATGGTATGTTGACTGTAATA 58.682 33.333 0.00 0.00 34.06 0.98
3138 4766 5.635417 AAGTTTTTCTATCCTGAAGCTGC 57.365 39.130 0.00 0.00 0.00 5.25
3145 4773 8.848474 TGGAACTAGAAAGTTTTTCTATCCTG 57.152 34.615 20.79 10.73 46.09 3.86
3168 4796 1.822990 ACCAGCAGAGCAATGAAATGG 59.177 47.619 0.00 0.00 0.00 3.16
3175 4803 3.423539 TCAGTTAACCAGCAGAGCAAT 57.576 42.857 0.88 0.00 0.00 3.56
3180 4808 6.061022 TGGAATAATCAGTTAACCAGCAGA 57.939 37.500 0.88 0.00 31.50 4.26
3181 4809 6.949352 ATGGAATAATCAGTTAACCAGCAG 57.051 37.500 0.88 0.00 35.44 4.24
3198 4826 3.635373 CAGCCTAGTGCATCAAATGGAAT 59.365 43.478 0.00 0.00 44.83 3.01
3210 4838 1.821332 GCCATCACCAGCCTAGTGC 60.821 63.158 0.00 0.00 41.71 4.40
3387 5015 9.577110 CCGTACTGTATGTAAATGTAGAGAAAA 57.423 33.333 6.31 0.00 32.25 2.29
3396 5024 7.276878 TGAATCACACCGTACTGTATGTAAATG 59.723 37.037 6.31 2.42 32.25 2.32
3405 5033 1.336517 CCGTGAATCACACCGTACTGT 60.337 52.381 14.24 0.00 45.73 3.55
3406 5034 1.336517 ACCGTGAATCACACCGTACTG 60.337 52.381 14.24 0.00 45.73 2.74
3407 5035 0.963962 ACCGTGAATCACACCGTACT 59.036 50.000 14.24 0.00 45.73 2.73
3412 5040 1.359848 CTAGCACCGTGAATCACACC 58.640 55.000 14.24 0.00 45.73 4.16
3415 5043 1.656652 ATGCTAGCACCGTGAATCAC 58.343 50.000 22.07 2.75 0.00 3.06
3416 5044 2.093500 AGAATGCTAGCACCGTGAATCA 60.093 45.455 22.07 0.00 0.00 2.57
3417 5045 2.541762 GAGAATGCTAGCACCGTGAATC 59.458 50.000 22.07 9.65 0.00 2.52
3419 5047 1.550524 AGAGAATGCTAGCACCGTGAA 59.449 47.619 22.07 0.00 0.00 3.18
3420 5048 1.186200 AGAGAATGCTAGCACCGTGA 58.814 50.000 22.07 0.00 0.00 4.35
3421 5049 2.015736 AAGAGAATGCTAGCACCGTG 57.984 50.000 22.07 0.00 0.00 4.94
3422 5050 2.770164 AAAGAGAATGCTAGCACCGT 57.230 45.000 22.07 8.47 0.00 4.83
3423 5051 3.484229 CGAAAAAGAGAATGCTAGCACCG 60.484 47.826 22.07 6.98 0.00 4.94
3425 5053 4.928661 TCGAAAAAGAGAATGCTAGCAC 57.071 40.909 22.07 8.58 0.00 4.40
3426 5054 5.470098 AGTTTCGAAAAAGAGAATGCTAGCA 59.530 36.000 21.85 21.85 0.00 3.49
3427 5055 5.932661 AGTTTCGAAAAAGAGAATGCTAGC 58.067 37.500 13.10 8.10 0.00 3.42
3428 5056 7.801752 AGAAGTTTCGAAAAAGAGAATGCTAG 58.198 34.615 13.10 0.00 0.00 3.42
3429 5057 7.730364 AGAAGTTTCGAAAAAGAGAATGCTA 57.270 32.000 13.10 0.00 0.00 3.49
3430 5058 6.625873 AGAAGTTTCGAAAAAGAGAATGCT 57.374 33.333 13.10 0.00 0.00 3.79
3435 5063 8.230486 GCATCATTAGAAGTTTCGAAAAAGAGA 58.770 33.333 13.10 6.01 0.00 3.10
3436 5064 8.233190 AGCATCATTAGAAGTTTCGAAAAAGAG 58.767 33.333 13.10 0.85 0.00 2.85
3437 5065 8.017373 CAGCATCATTAGAAGTTTCGAAAAAGA 58.983 33.333 13.10 0.00 0.00 2.52
3438 5066 7.805071 ACAGCATCATTAGAAGTTTCGAAAAAG 59.195 33.333 13.10 0.00 0.00 2.27
3439 5067 7.591057 CACAGCATCATTAGAAGTTTCGAAAAA 59.409 33.333 13.10 3.13 0.00 1.94
3440 5068 7.041440 TCACAGCATCATTAGAAGTTTCGAAAA 60.041 33.333 13.10 0.00 0.00 2.29
3441 5069 6.426633 TCACAGCATCATTAGAAGTTTCGAAA 59.573 34.615 6.47 6.47 0.00 3.46
3442 5070 5.931724 TCACAGCATCATTAGAAGTTTCGAA 59.068 36.000 0.00 0.00 0.00 3.71
3443 5071 5.478407 TCACAGCATCATTAGAAGTTTCGA 58.522 37.500 0.00 0.00 0.00 3.71
3444 5072 5.784750 TCACAGCATCATTAGAAGTTTCG 57.215 39.130 0.00 0.00 0.00 3.46
3445 5073 6.541641 AGGATCACAGCATCATTAGAAGTTTC 59.458 38.462 0.00 0.00 0.00 2.78
3446 5074 6.318144 CAGGATCACAGCATCATTAGAAGTTT 59.682 38.462 0.00 0.00 0.00 2.66
3447 5075 5.821470 CAGGATCACAGCATCATTAGAAGTT 59.179 40.000 0.00 0.00 0.00 2.66
3448 5076 5.104610 ACAGGATCACAGCATCATTAGAAGT 60.105 40.000 0.00 0.00 0.00 3.01
3449 5077 5.366460 ACAGGATCACAGCATCATTAGAAG 58.634 41.667 0.00 0.00 0.00 2.85
3450 5078 5.104817 TGACAGGATCACAGCATCATTAGAA 60.105 40.000 0.00 0.00 29.99 2.10
3451 5079 4.406649 TGACAGGATCACAGCATCATTAGA 59.593 41.667 0.00 0.00 29.99 2.10
3452 5080 4.700700 TGACAGGATCACAGCATCATTAG 58.299 43.478 0.00 0.00 29.99 1.73
3453 5081 4.758773 TGACAGGATCACAGCATCATTA 57.241 40.909 0.00 0.00 29.99 1.90
3454 5082 3.639672 TGACAGGATCACAGCATCATT 57.360 42.857 0.00 0.00 29.99 2.57
3455 5083 3.639672 TTGACAGGATCACAGCATCAT 57.360 42.857 0.00 0.00 36.92 2.45
3456 5084 3.199289 AGATTGACAGGATCACAGCATCA 59.801 43.478 0.00 0.00 36.92 3.07
3457 5085 3.806380 AGATTGACAGGATCACAGCATC 58.194 45.455 0.00 0.00 36.92 3.91
3458 5086 3.199289 TGAGATTGACAGGATCACAGCAT 59.801 43.478 0.00 0.00 36.92 3.79
3459 5087 2.568509 TGAGATTGACAGGATCACAGCA 59.431 45.455 0.00 0.00 36.92 4.41
3460 5088 3.196463 CTGAGATTGACAGGATCACAGC 58.804 50.000 0.00 0.00 36.92 4.40
3468 5096 4.256110 TGTTACATGCTGAGATTGACAGG 58.744 43.478 0.00 0.00 36.09 4.00
3477 5105 7.336176 AGCATATTGGATATGTTACATGCTGAG 59.664 37.037 8.26 0.00 44.45 3.35
3505 5295 6.419413 GCAGTAAATGTAGTTCTGCTAGCTAG 59.581 42.308 16.84 16.84 45.14 3.42
3506 5296 6.273825 GCAGTAAATGTAGTTCTGCTAGCTA 58.726 40.000 17.23 0.72 45.14 3.32
3507 5297 5.112686 GCAGTAAATGTAGTTCTGCTAGCT 58.887 41.667 17.23 0.00 45.14 3.32
3508 5298 5.396750 GCAGTAAATGTAGTTCTGCTAGC 57.603 43.478 8.10 8.10 45.14 3.42
3539 5329 2.869801 TGCAGCATAGCAACGTTATACC 59.130 45.455 0.00 0.00 42.46 2.73
3682 5472 1.445582 GAACGGACCAGGTACAGCG 60.446 63.158 1.62 0.00 0.00 5.18
3700 5490 3.820467 TGAAAGTATGCACAGGTTGAAGG 59.180 43.478 0.00 0.00 0.00 3.46
3728 5518 8.542497 AAAACTGTCAAGCATTCTATACGTAA 57.458 30.769 0.00 0.00 0.00 3.18
3749 5541 5.920840 GGGAGTTCTTATTTGCACTGAAAAC 59.079 40.000 0.00 0.00 0.00 2.43
3751 5543 5.136828 TGGGAGTTCTTATTTGCACTGAAA 58.863 37.500 0.00 0.00 0.00 2.69
3768 5560 2.961062 GCATGCAGGAATTAATGGGAGT 59.039 45.455 14.21 0.00 0.00 3.85
3786 5578 3.446873 TGAAACCACAAAGAACACTGCAT 59.553 39.130 0.00 0.00 0.00 3.96
3874 5666 6.100004 ACGAATATGGTGAACTGAACTACTG 58.900 40.000 0.00 0.00 0.00 2.74
3895 5690 0.902531 CCCTTAGCCTCTTCCAACGA 59.097 55.000 0.00 0.00 0.00 3.85
3896 5691 0.613777 ACCCTTAGCCTCTTCCAACG 59.386 55.000 0.00 0.00 0.00 4.10
3897 5692 1.950954 GCACCCTTAGCCTCTTCCAAC 60.951 57.143 0.00 0.00 0.00 3.77
3898 5693 0.328258 GCACCCTTAGCCTCTTCCAA 59.672 55.000 0.00 0.00 0.00 3.53
3923 5718 7.730672 TCTCTTTCCTGATCATATCCATAGG 57.269 40.000 0.00 0.00 0.00 2.57
3925 5720 7.457218 AGCTTCTCTTTCCTGATCATATCCATA 59.543 37.037 0.00 0.00 0.00 2.74
3926 5721 6.272792 AGCTTCTCTTTCCTGATCATATCCAT 59.727 38.462 0.00 0.00 0.00 3.41
3927 5722 5.605908 AGCTTCTCTTTCCTGATCATATCCA 59.394 40.000 0.00 0.00 0.00 3.41
3928 5723 5.933463 CAGCTTCTCTTTCCTGATCATATCC 59.067 44.000 0.00 0.00 0.00 2.59
3929 5724 5.933463 CCAGCTTCTCTTTCCTGATCATATC 59.067 44.000 0.00 0.00 0.00 1.63
4036 5832 1.775385 ACAGTGGTTGGAACTTTGGG 58.225 50.000 0.00 0.00 0.00 4.12
4037 5833 3.733684 CGAAACAGTGGTTGGAACTTTGG 60.734 47.826 0.00 0.00 37.30 3.28
4041 5837 2.413310 ACGAAACAGTGGTTGGAACT 57.587 45.000 10.16 0.00 37.30 3.01
4055 5853 1.339055 CCTCCTGAGCCATCAACGAAA 60.339 52.381 0.00 0.00 34.23 3.46
4058 5856 1.153289 CCCTCCTGAGCCATCAACG 60.153 63.158 0.00 0.00 34.23 4.10
4063 5861 0.915364 GTTTCTCCCTCCTGAGCCAT 59.085 55.000 0.00 0.00 32.22 4.40
4065 5863 0.693049 TTGTTTCTCCCTCCTGAGCC 59.307 55.000 0.00 0.00 32.22 4.70
4067 5865 1.338200 CGGTTGTTTCTCCCTCCTGAG 60.338 57.143 0.00 0.00 0.00 3.35
4069 5867 0.685097 TCGGTTGTTTCTCCCTCCTG 59.315 55.000 0.00 0.00 0.00 3.86
4070 5868 1.430992 TTCGGTTGTTTCTCCCTCCT 58.569 50.000 0.00 0.00 0.00 3.69
4071 5869 2.491675 ATTCGGTTGTTTCTCCCTCC 57.508 50.000 0.00 0.00 0.00 4.30
4081 5896 5.446143 TGAAAAGTTGCATATTCGGTTGT 57.554 34.783 0.00 0.00 0.00 3.32
4149 5964 9.259832 ACAGAACAGCAGGTATATATATGATCA 57.740 33.333 5.44 0.00 0.00 2.92
4153 5968 9.254133 GCATACAGAACAGCAGGTATATATATG 57.746 37.037 5.44 0.00 0.00 1.78
4154 5969 8.424918 GGCATACAGAACAGCAGGTATATATAT 58.575 37.037 0.00 0.00 0.00 0.86
4155 5970 7.147724 GGGCATACAGAACAGCAGGTATATATA 60.148 40.741 0.00 0.00 0.00 0.86
4156 5971 6.352222 GGGCATACAGAACAGCAGGTATATAT 60.352 42.308 0.00 0.00 0.00 0.86
4157 5972 5.046591 GGGCATACAGAACAGCAGGTATATA 60.047 44.000 0.00 0.00 0.00 0.86
4158 5973 4.263068 GGGCATACAGAACAGCAGGTATAT 60.263 45.833 0.00 0.00 0.00 0.86
4159 5974 3.071023 GGGCATACAGAACAGCAGGTATA 59.929 47.826 0.00 0.00 0.00 1.47
4164 5979 1.065926 TCAGGGCATACAGAACAGCAG 60.066 52.381 0.00 0.00 0.00 4.24
4182 5997 3.792401 ACCGCATCGAAATCAGTATTCA 58.208 40.909 0.00 0.00 0.00 2.57
4195 6013 3.463533 TTGAACAACATAACCGCATCG 57.536 42.857 0.00 0.00 0.00 3.84
4202 6020 8.760569 CCCACAACTAAAATTGAACAACATAAC 58.239 33.333 0.00 0.00 33.57 1.89
4251 6069 0.387929 TATCACGATTCACGGGGAGC 59.612 55.000 0.00 0.00 46.40 4.70
4253 6071 2.696187 TGAATATCACGATTCACGGGGA 59.304 45.455 0.00 0.00 46.40 4.81
4254 6072 3.106242 TGAATATCACGATTCACGGGG 57.894 47.619 0.00 0.00 46.40 5.73
4255 6073 3.679980 GGATGAATATCACGATTCACGGG 59.320 47.826 1.14 0.00 46.00 5.28
4257 6075 4.386954 CCAGGATGAATATCACGATTCACG 59.613 45.833 1.14 0.00 46.00 4.35
4260 6078 5.641209 CCTTCCAGGATGAATATCACGATTC 59.359 44.000 3.79 0.00 39.69 2.52
4261 6079 5.072329 ACCTTCCAGGATGAATATCACGATT 59.928 40.000 3.79 0.00 39.69 3.34
4262 6080 4.594920 ACCTTCCAGGATGAATATCACGAT 59.405 41.667 3.79 0.00 39.69 3.73
4265 6083 5.684704 TGAACCTTCCAGGATGAATATCAC 58.315 41.667 3.79 0.00 39.69 3.06
4268 6086 6.776887 AGATGAACCTTCCAGGATGAATAT 57.223 37.500 3.79 0.00 39.69 1.28
4270 6088 5.193325 AGAAGATGAACCTTCCAGGATGAAT 59.807 40.000 3.79 0.00 42.58 2.57
4271 6089 4.537688 AGAAGATGAACCTTCCAGGATGAA 59.462 41.667 3.79 0.00 42.58 2.57
4272 6090 4.107072 AGAAGATGAACCTTCCAGGATGA 58.893 43.478 3.79 0.00 42.58 2.92
4273 6091 4.450053 GAGAAGATGAACCTTCCAGGATG 58.550 47.826 0.00 0.00 42.58 3.51
4275 6093 2.497675 CGAGAAGATGAACCTTCCAGGA 59.502 50.000 0.00 0.00 42.58 3.86
4276 6094 2.419297 CCGAGAAGATGAACCTTCCAGG 60.419 54.545 0.00 0.00 42.58 4.45
4279 6097 2.735762 CGACCGAGAAGATGAACCTTCC 60.736 54.545 0.00 0.00 42.58 3.46
4315 8001 4.074970 CTCTTATATGTGGGGTTGGATGC 58.925 47.826 0.00 0.00 0.00 3.91
4322 8008 2.527057 TCCTCCCTCTTATATGTGGGGT 59.473 50.000 20.11 0.00 40.23 4.95
4326 8012 3.057174 GCGTCTCCTCCCTCTTATATGTG 60.057 52.174 0.00 0.00 0.00 3.21
4327 8013 3.158676 GCGTCTCCTCCCTCTTATATGT 58.841 50.000 0.00 0.00 0.00 2.29
4328 8014 3.192422 CAGCGTCTCCTCCCTCTTATATG 59.808 52.174 0.00 0.00 0.00 1.78
4329 8015 3.426615 CAGCGTCTCCTCCCTCTTATAT 58.573 50.000 0.00 0.00 0.00 0.86
4330 8016 2.489255 CCAGCGTCTCCTCCCTCTTATA 60.489 54.545 0.00 0.00 0.00 0.98
4331 8017 1.698506 CAGCGTCTCCTCCCTCTTAT 58.301 55.000 0.00 0.00 0.00 1.73
4332 8018 0.395862 CCAGCGTCTCCTCCCTCTTA 60.396 60.000 0.00 0.00 0.00 2.10
4517 8209 2.862674 GATAGGCACGGCGGGTTTCA 62.863 60.000 12.27 0.00 0.00 2.69
4590 8282 4.597075 TGGCTCCTAAATATATCAGCACCA 59.403 41.667 0.00 0.00 0.00 4.17
4596 8288 5.841267 TGGCTTGGCTCCTAAATATATCA 57.159 39.130 0.00 0.00 0.00 2.15
4602 8294 2.225117 ACTGTTGGCTTGGCTCCTAAAT 60.225 45.455 0.00 0.00 0.00 1.40
4604 8296 0.771127 ACTGTTGGCTTGGCTCCTAA 59.229 50.000 0.00 0.00 0.00 2.69
4611 8303 0.518636 CACATCGACTGTTGGCTTGG 59.481 55.000 0.00 0.00 35.29 3.61
4612 8304 0.110056 GCACATCGACTGTTGGCTTG 60.110 55.000 0.00 0.00 35.29 4.01
4613 8305 0.250467 AGCACATCGACTGTTGGCTT 60.250 50.000 0.00 0.00 35.29 4.35
4614 8306 0.671781 GAGCACATCGACTGTTGGCT 60.672 55.000 10.43 10.43 35.29 4.75
4615 8307 1.790387 GAGCACATCGACTGTTGGC 59.210 57.895 0.00 0.00 35.29 4.52
4650 8348 2.887783 AGACCAGTACTGACACTGTGAG 59.112 50.000 24.68 6.45 43.68 3.51
4651 8349 2.945456 AGACCAGTACTGACACTGTGA 58.055 47.619 24.68 0.00 43.68 3.58
4652 8350 3.735237 AAGACCAGTACTGACACTGTG 57.265 47.619 24.68 6.19 43.68 3.66
4653 8351 4.471548 AGTAAGACCAGTACTGACACTGT 58.528 43.478 24.68 12.69 43.68 3.55
4654 8352 5.455056 AAGTAAGACCAGTACTGACACTG 57.545 43.478 24.68 9.38 44.60 3.66
4666 8364 3.483421 TCACTCACTCGAAGTAAGACCA 58.517 45.455 0.00 0.00 0.00 4.02
4675 8373 1.402852 CGATGCCTTCACTCACTCGAA 60.403 52.381 0.00 0.00 0.00 3.71
4676 8374 0.171231 CGATGCCTTCACTCACTCGA 59.829 55.000 0.00 0.00 0.00 4.04
4678 8376 1.067565 TGACGATGCCTTCACTCACTC 60.068 52.381 0.00 0.00 0.00 3.51
4679 8377 0.969149 TGACGATGCCTTCACTCACT 59.031 50.000 0.00 0.00 0.00 3.41
4680 8378 1.662629 CATGACGATGCCTTCACTCAC 59.337 52.381 0.00 0.00 0.00 3.51
4681 8379 1.405933 CCATGACGATGCCTTCACTCA 60.406 52.381 0.00 0.00 0.00 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.