Multiple sequence alignment - TraesCS5B01G392200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G392200 chr5B 100.000 5319 0 0 1 5319 571181787 571187105 0.000000e+00 9823.0
1 TraesCS5B01G392200 chr5B 87.500 440 34 14 2950 3377 447877715 447877285 6.190000e-134 488.0
2 TraesCS5B01G392200 chr5B 79.167 216 40 3 1 212 706765522 706765736 1.540000e-30 145.0
3 TraesCS5B01G392200 chr5D 93.032 4320 208 53 211 4475 464086221 464090502 0.000000e+00 6224.0
4 TraesCS5B01G392200 chr5D 90.920 870 44 9 4476 5319 464090548 464091408 0.000000e+00 1136.0
5 TraesCS5B01G392200 chr5A 92.264 4072 172 58 462 4473 584513161 584517149 0.000000e+00 5642.0
6 TraesCS5B01G392200 chr5A 90.455 660 30 16 4680 5319 584517510 584518156 0.000000e+00 839.0
7 TraesCS5B01G392200 chr5A 80.660 212 34 6 1 208 340812093 340812301 1.980000e-34 158.0
8 TraesCS5B01G392200 chr5A 87.059 85 4 6 4476 4553 584517198 584517282 7.340000e-14 89.8
9 TraesCS5B01G392200 chr1B 90.678 944 48 19 922 1854 665427125 665426211 0.000000e+00 1219.0
10 TraesCS5B01G392200 chr1B 87.244 439 38 12 2950 3377 328504088 328504519 8.010000e-133 484.0
11 TraesCS5B01G392200 chr1B 81.604 212 39 0 1 212 480834639 480834850 5.470000e-40 176.0
12 TraesCS5B01G392200 chr4A 90.285 947 48 16 922 1854 672618395 672617479 0.000000e+00 1199.0
13 TraesCS5B01G392200 chr4A 89.757 947 52 19 922 1854 672580154 672579239 0.000000e+00 1170.0
14 TraesCS5B01G392200 chr4A 88.611 360 29 8 2558 2914 711818610 711818260 1.370000e-115 427.0
15 TraesCS5B01G392200 chr4A 88.611 360 29 8 2558 2914 711866695 711866345 1.370000e-115 427.0
16 TraesCS5B01G392200 chr4A 84.703 438 51 9 2950 3377 711867310 711866879 1.770000e-114 424.0
17 TraesCS5B01G392200 chr4A 86.379 301 29 7 3089 3377 675003216 675002916 8.600000e-83 318.0
18 TraesCS5B01G392200 chr4A 87.330 221 22 2 2950 3169 711818258 711818043 1.140000e-61 248.0
19 TraesCS5B01G392200 chr4A 86.878 221 23 6 2950 3169 711866343 711866128 5.320000e-60 243.0
20 TraesCS5B01G392200 chr3B 89.461 408 23 9 922 1318 787282941 787283339 1.030000e-136 497.0
21 TraesCS5B01G392200 chr3B 81.132 212 36 2 1 212 47265573 47265366 3.300000e-37 167.0
22 TraesCS5B01G392200 chr4B 87.643 437 40 7 2950 3377 524141749 524142180 3.700000e-136 496.0
23 TraesCS5B01G392200 chr4B 87.016 439 38 10 2950 3377 524140786 524141216 1.340000e-130 477.0
24 TraesCS5B01G392200 chr4B 91.246 297 23 3 2619 2914 524140490 524140784 8.300000e-108 401.0
25 TraesCS5B01G392200 chr4B 87.465 359 30 9 2559 2914 524141401 524141747 2.980000e-107 399.0
26 TraesCS5B01G392200 chr2B 86.499 437 45 5 2950 3377 651651093 651651524 8.070000e-128 468.0
27 TraesCS5B01G392200 chr2B 88.611 360 28 9 2558 2914 651651708 651652057 4.920000e-115 425.0
28 TraesCS5B01G392200 chr2B 90.909 297 24 3 2619 2914 651650797 651651091 3.860000e-106 396.0
29 TraesCS5B01G392200 chr2B 87.584 298 28 5 3089 3377 359279590 359279293 2.370000e-88 337.0
30 TraesCS5B01G392200 chr1A 85.355 437 50 8 2950 3377 590530164 590530595 1.760000e-119 440.0
31 TraesCS5B01G392200 chr1A 88.018 217 25 1 330 545 334088222 334088438 6.840000e-64 255.0
32 TraesCS5B01G392200 chr1A 80.282 213 41 1 1 212 458533511 458533723 5.510000e-35 159.0
33 TraesCS5B01G392200 chr1A 80.952 210 31 8 3 203 39358383 39358592 1.980000e-34 158.0
34 TraesCS5B01G392200 chr6B 88.301 359 30 8 2558 2914 187094147 187094495 2.290000e-113 420.0
35 TraesCS5B01G392200 chr2D 88.479 217 24 1 330 545 635072436 635072220 1.470000e-65 261.0
36 TraesCS5B01G392200 chr2D 80.841 214 30 5 1 204 556955699 556955911 1.980000e-34 158.0
37 TraesCS5B01G392200 chrUn 88.018 217 25 1 330 545 45096156 45096372 6.840000e-64 255.0
38 TraesCS5B01G392200 chrUn 88.018 217 25 1 330 545 416116893 416116677 6.840000e-64 255.0
39 TraesCS5B01G392200 chrUn 83.636 165 26 1 1 164 51420332 51420168 2.570000e-33 154.0
40 TraesCS5B01G392200 chr6A 88.018 217 25 1 330 545 155842003 155842219 6.840000e-64 255.0
41 TraesCS5B01G392200 chr3D 88.018 217 25 1 330 545 602894293 602894077 6.840000e-64 255.0
42 TraesCS5B01G392200 chr3A 88.018 217 25 1 330 545 66034915 66034699 6.840000e-64 255.0
43 TraesCS5B01G392200 chr1D 88.018 217 25 1 330 545 493799816 493800032 6.840000e-64 255.0
44 TraesCS5B01G392200 chr1D 82.353 221 30 3 1 212 357448306 357448526 3.270000e-42 183.0
45 TraesCS5B01G392200 chr7D 84.024 169 27 0 4 172 572800337 572800505 4.260000e-36 163.0
46 TraesCS5B01G392200 chr7D 92.157 51 4 0 5005 5055 535563344 535563394 7.390000e-09 73.1
47 TraesCS5B01G392200 chr7B 81.443 194 31 3 1 190 451365497 451365689 2.570000e-33 154.0
48 TraesCS5B01G392200 chr7B 95.455 44 2 0 5012 5055 577301658 577301701 2.660000e-08 71.3
49 TraesCS5B01G392200 chr7A 92.157 51 4 0 5005 5055 618117503 618117453 7.390000e-09 73.1
50 TraesCS5B01G392200 chr2A 89.286 56 6 0 5000 5055 406997487 406997432 2.660000e-08 71.3
51 TraesCS5B01G392200 chr2A 89.286 56 6 0 5000 5055 407125984 407125929 2.660000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G392200 chr5B 571181787 571187105 5318 False 9823.000000 9823 100.000000 1 5319 1 chr5B.!!$F1 5318
1 TraesCS5B01G392200 chr5D 464086221 464091408 5187 False 3680.000000 6224 91.976000 211 5319 2 chr5D.!!$F1 5108
2 TraesCS5B01G392200 chr5A 584513161 584518156 4995 False 2190.266667 5642 89.926000 462 5319 3 chr5A.!!$F2 4857
3 TraesCS5B01G392200 chr1B 665426211 665427125 914 True 1219.000000 1219 90.678000 922 1854 1 chr1B.!!$R1 932
4 TraesCS5B01G392200 chr4A 672617479 672618395 916 True 1199.000000 1199 90.285000 922 1854 1 chr4A.!!$R2 932
5 TraesCS5B01G392200 chr4A 672579239 672580154 915 True 1170.000000 1170 89.757000 922 1854 1 chr4A.!!$R1 932
6 TraesCS5B01G392200 chr4A 711866128 711867310 1182 True 364.666667 427 86.730667 2558 3377 3 chr4A.!!$R5 819
7 TraesCS5B01G392200 chr4A 711818043 711818610 567 True 337.500000 427 87.970500 2558 3169 2 chr4A.!!$R4 611
8 TraesCS5B01G392200 chr4B 524140490 524142180 1690 False 443.250000 496 88.342500 2559 3377 4 chr4B.!!$F1 818
9 TraesCS5B01G392200 chr2B 651650797 651652057 1260 False 429.666667 468 88.673000 2558 3377 3 chr2B.!!$F1 819

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
117 118 0.033796 CCACCAGCAGGAACCATGAT 60.034 55.000 0.35 0.0 38.69 2.45 F
207 208 0.039764 AGCTTTTTAGGGGAGGTGGC 59.960 55.000 0.00 0.0 0.00 5.01 F
1405 1435 0.102481 TTGCCTCTAGGATTCGCGAC 59.898 55.000 9.15 0.0 37.39 5.19 F
1643 1673 1.153086 GCAGAGGTATGTGGCCCTG 60.153 63.158 0.00 0.0 0.00 4.45 F
2270 2303 1.613630 TGGGGACAGGAAGAGAGGC 60.614 63.158 0.00 0.0 35.01 4.70 F
2923 3921 1.197036 GCTTGGGCTTGAAAGACGTAC 59.803 52.381 0.00 0.0 33.77 3.67 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1382 1412 0.249489 CGAATCCTAGAGGCAACGGG 60.249 60.000 0.00 0.0 46.39 5.28 R
2181 2214 0.438830 GATTCGTCCGTGTCAACAGC 59.561 55.000 0.00 0.0 0.00 4.40 R
2342 2375 1.894466 CATGCATTCCCAAAGTCCACA 59.106 47.619 0.00 0.0 0.00 4.17 R
2923 3921 2.352030 CCAGTAGCAACCAAACTGCATG 60.352 50.000 0.00 0.0 42.48 4.06 R
3980 5408 0.533491 CATCAAACCATGGGTGCTGG 59.467 55.000 18.09 0.3 35.34 4.85 R
4504 5980 0.036010 CCGGAAGACAGCCTCACAAT 60.036 55.000 0.00 0.0 0.00 2.71 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 5.208890 ACCTTATTCCATTTTTAGGGAGCC 58.791 41.667 0.00 0.00 34.02 4.70
24 25 4.278419 CCTTATTCCATTTTTAGGGAGCCG 59.722 45.833 0.00 0.00 34.02 5.52
26 27 0.395173 TCCATTTTTAGGGAGCCGCC 60.395 55.000 0.00 0.00 0.00 6.13
27 28 0.682855 CCATTTTTAGGGAGCCGCCA 60.683 55.000 0.00 0.00 38.95 5.69
28 29 0.455815 CATTTTTAGGGAGCCGCCAC 59.544 55.000 0.00 0.00 38.95 5.01
29 30 0.683179 ATTTTTAGGGAGCCGCCACC 60.683 55.000 0.00 0.00 38.95 4.61
30 31 3.615509 TTTTAGGGAGCCGCCACCG 62.616 63.158 0.00 0.00 38.95 4.94
42 43 3.382832 CCACCGCCTCGTCTTCCT 61.383 66.667 0.00 0.00 0.00 3.36
44 45 1.601419 CCACCGCCTCGTCTTCCTTA 61.601 60.000 0.00 0.00 0.00 2.69
45 46 0.179134 CACCGCCTCGTCTTCCTTAG 60.179 60.000 0.00 0.00 0.00 2.18
46 47 1.227002 CCGCCTCGTCTTCCTTAGC 60.227 63.158 0.00 0.00 0.00 3.09
47 48 1.511305 CGCCTCGTCTTCCTTAGCA 59.489 57.895 0.00 0.00 0.00 3.49
49 50 0.179097 GCCTCGTCTTCCTTAGCAGG 60.179 60.000 0.00 0.00 42.50 4.85
59 60 1.628846 TCCTTAGCAGGACAGAAACCC 59.371 52.381 0.00 0.00 45.20 4.11
60 61 1.630878 CCTTAGCAGGACAGAAACCCT 59.369 52.381 0.00 0.00 44.19 4.34
61 62 2.838202 CCTTAGCAGGACAGAAACCCTA 59.162 50.000 0.00 0.00 44.19 3.53
62 63 3.263425 CCTTAGCAGGACAGAAACCCTAA 59.737 47.826 0.00 0.00 44.19 2.69
63 64 2.861147 AGCAGGACAGAAACCCTAAC 57.139 50.000 0.00 0.00 0.00 2.34
64 65 2.054799 AGCAGGACAGAAACCCTAACA 58.945 47.619 0.00 0.00 0.00 2.41
65 66 2.441750 AGCAGGACAGAAACCCTAACAA 59.558 45.455 0.00 0.00 0.00 2.83
66 67 3.117663 AGCAGGACAGAAACCCTAACAAA 60.118 43.478 0.00 0.00 0.00 2.83
67 68 3.634910 GCAGGACAGAAACCCTAACAAAA 59.365 43.478 0.00 0.00 0.00 2.44
68 69 4.499188 GCAGGACAGAAACCCTAACAAAAC 60.499 45.833 0.00 0.00 0.00 2.43
69 70 4.887655 CAGGACAGAAACCCTAACAAAACT 59.112 41.667 0.00 0.00 0.00 2.66
70 71 5.008712 CAGGACAGAAACCCTAACAAAACTC 59.991 44.000 0.00 0.00 0.00 3.01
71 72 4.024302 GGACAGAAACCCTAACAAAACTCG 60.024 45.833 0.00 0.00 0.00 4.18
72 73 4.773013 ACAGAAACCCTAACAAAACTCGA 58.227 39.130 0.00 0.00 0.00 4.04
73 74 5.187687 ACAGAAACCCTAACAAAACTCGAA 58.812 37.500 0.00 0.00 0.00 3.71
74 75 5.296035 ACAGAAACCCTAACAAAACTCGAAG 59.704 40.000 0.00 0.00 0.00 3.79
75 76 5.526111 CAGAAACCCTAACAAAACTCGAAGA 59.474 40.000 0.00 0.00 0.00 2.87
76 77 6.037830 CAGAAACCCTAACAAAACTCGAAGAA 59.962 38.462 0.00 0.00 34.09 2.52
77 78 6.600427 AGAAACCCTAACAAAACTCGAAGAAA 59.400 34.615 0.00 0.00 34.09 2.52
78 79 6.373186 AACCCTAACAAAACTCGAAGAAAG 57.627 37.500 0.00 0.00 34.09 2.62
80 81 6.296803 ACCCTAACAAAACTCGAAGAAAGAT 58.703 36.000 0.00 0.00 34.09 2.40
81 82 6.427242 ACCCTAACAAAACTCGAAGAAAGATC 59.573 38.462 0.00 0.00 34.09 2.75
83 84 7.817962 CCCTAACAAAACTCGAAGAAAGATCTA 59.182 37.037 0.00 0.00 33.77 1.98
88 89 9.717892 ACAAAACTCGAAGAAAGATCTAAAAAC 57.282 29.630 0.00 0.00 33.77 2.43
89 90 8.883168 CAAAACTCGAAGAAAGATCTAAAAACG 58.117 33.333 0.00 0.41 33.77 3.60
90 91 6.707599 ACTCGAAGAAAGATCTAAAAACGG 57.292 37.500 0.00 0.00 33.77 4.44
91 92 6.453092 ACTCGAAGAAAGATCTAAAAACGGA 58.547 36.000 0.00 0.00 33.77 4.69
92 93 6.586844 ACTCGAAGAAAGATCTAAAAACGGAG 59.413 38.462 0.00 1.08 33.77 4.63
93 94 5.347907 TCGAAGAAAGATCTAAAAACGGAGC 59.652 40.000 0.00 0.00 33.77 4.70
94 95 5.446073 CGAAGAAAGATCTAAAAACGGAGCC 60.446 44.000 0.00 0.00 33.77 4.70
95 96 4.262617 AGAAAGATCTAAAAACGGAGCCC 58.737 43.478 0.00 0.00 32.88 5.19
97 98 3.545366 AGATCTAAAAACGGAGCCCTC 57.455 47.619 0.00 0.00 0.00 4.30
98 99 2.170817 AGATCTAAAAACGGAGCCCTCC 59.829 50.000 4.19 4.19 46.18 4.30
99 100 0.616891 TCTAAAAACGGAGCCCTCCC 59.383 55.000 8.68 0.00 46.96 4.30
100 101 0.326927 CTAAAAACGGAGCCCTCCCA 59.673 55.000 8.68 0.00 46.96 4.37
101 102 0.037160 TAAAAACGGAGCCCTCCCAC 59.963 55.000 8.68 0.00 46.96 4.61
102 103 2.708593 AAAAACGGAGCCCTCCCACC 62.709 60.000 8.68 0.00 46.96 4.61
110 111 2.935481 CCCTCCCACCAGCAGGAA 60.935 66.667 0.35 0.00 38.69 3.36
111 112 2.352805 CCTCCCACCAGCAGGAAC 59.647 66.667 0.35 0.00 38.69 3.62
114 115 1.852157 TCCCACCAGCAGGAACCAT 60.852 57.895 0.35 0.00 38.69 3.55
115 116 1.679977 CCCACCAGCAGGAACCATG 60.680 63.158 0.35 0.00 38.69 3.66
116 117 1.379916 CCACCAGCAGGAACCATGA 59.620 57.895 0.35 0.00 38.69 3.07
117 118 0.033796 CCACCAGCAGGAACCATGAT 60.034 55.000 0.35 0.00 38.69 2.45
118 119 1.386533 CACCAGCAGGAACCATGATC 58.613 55.000 0.35 0.00 38.69 2.92
119 120 0.257039 ACCAGCAGGAACCATGATCC 59.743 55.000 0.35 8.93 38.69 3.36
120 121 0.256752 CCAGCAGGAACCATGATCCA 59.743 55.000 16.80 0.00 39.55 3.41
121 122 1.386533 CAGCAGGAACCATGATCCAC 58.613 55.000 16.80 10.01 39.55 4.02
122 123 1.064906 CAGCAGGAACCATGATCCACT 60.065 52.381 16.80 11.65 39.55 4.00
123 124 1.211457 AGCAGGAACCATGATCCACTC 59.789 52.381 16.80 7.52 39.55 3.51
124 125 1.211457 GCAGGAACCATGATCCACTCT 59.789 52.381 16.80 0.00 39.55 3.24
125 126 2.915349 CAGGAACCATGATCCACTCTG 58.085 52.381 16.80 5.55 39.55 3.35
126 127 2.238144 CAGGAACCATGATCCACTCTGT 59.762 50.000 16.80 0.00 39.55 3.41
127 128 2.915604 AGGAACCATGATCCACTCTGTT 59.084 45.455 16.80 0.00 39.55 3.16
128 129 3.054802 AGGAACCATGATCCACTCTGTTC 60.055 47.826 16.80 8.23 39.55 3.18
129 130 3.274288 GAACCATGATCCACTCTGTTCC 58.726 50.000 0.00 0.00 0.00 3.62
130 131 1.561542 ACCATGATCCACTCTGTTCCC 59.438 52.381 0.00 0.00 0.00 3.97
131 132 1.561076 CCATGATCCACTCTGTTCCCA 59.439 52.381 0.00 0.00 0.00 4.37
132 133 2.174210 CCATGATCCACTCTGTTCCCAT 59.826 50.000 0.00 0.00 0.00 4.00
133 134 3.211865 CATGATCCACTCTGTTCCCATG 58.788 50.000 0.00 0.00 0.00 3.66
135 136 2.237143 TGATCCACTCTGTTCCCATGAC 59.763 50.000 0.00 0.00 0.00 3.06
136 137 2.030027 TCCACTCTGTTCCCATGACT 57.970 50.000 0.00 0.00 0.00 3.41
137 138 1.902508 TCCACTCTGTTCCCATGACTC 59.097 52.381 0.00 0.00 0.00 3.36
138 139 1.905215 CCACTCTGTTCCCATGACTCT 59.095 52.381 0.00 0.00 0.00 3.24
139 140 3.099905 CCACTCTGTTCCCATGACTCTA 58.900 50.000 0.00 0.00 0.00 2.43
140 141 3.118956 CCACTCTGTTCCCATGACTCTAC 60.119 52.174 0.00 0.00 0.00 2.59
141 142 2.755655 ACTCTGTTCCCATGACTCTACG 59.244 50.000 0.00 0.00 0.00 3.51
142 143 2.099921 CTCTGTTCCCATGACTCTACGG 59.900 54.545 0.00 0.00 0.00 4.02
143 144 0.535335 TGTTCCCATGACTCTACGGC 59.465 55.000 0.00 0.00 0.00 5.68
144 145 0.179081 GTTCCCATGACTCTACGGCC 60.179 60.000 0.00 0.00 0.00 6.13
145 146 1.672854 TTCCCATGACTCTACGGCCG 61.673 60.000 26.86 26.86 0.00 6.13
146 147 2.279517 CCATGACTCTACGGCCGC 60.280 66.667 28.58 8.37 0.00 6.53
147 148 2.494445 CATGACTCTACGGCCGCA 59.506 61.111 28.58 12.87 0.00 5.69
148 149 1.589993 CATGACTCTACGGCCGCAG 60.590 63.158 28.58 23.96 0.00 5.18
161 162 3.443925 CGCAGGAGACGAGGCAGA 61.444 66.667 0.00 0.00 0.00 4.26
162 163 2.183046 GCAGGAGACGAGGCAGAC 59.817 66.667 0.00 0.00 0.00 3.51
163 164 2.888863 CAGGAGACGAGGCAGACC 59.111 66.667 0.00 0.00 0.00 3.85
164 165 1.979155 CAGGAGACGAGGCAGACCA 60.979 63.158 0.00 0.00 39.06 4.02
165 166 1.979693 AGGAGACGAGGCAGACCAC 60.980 63.158 0.00 0.00 39.06 4.16
166 167 2.574399 GAGACGAGGCAGACCACC 59.426 66.667 0.00 0.00 39.06 4.61
167 168 3.343788 GAGACGAGGCAGACCACCG 62.344 68.421 0.00 0.00 39.06 4.94
168 169 3.371063 GACGAGGCAGACCACCGA 61.371 66.667 0.00 0.00 39.06 4.69
169 170 3.628280 GACGAGGCAGACCACCGAC 62.628 68.421 0.00 0.00 39.06 4.79
171 172 4.436998 GAGGCAGACCACCGACGG 62.437 72.222 13.61 13.61 39.06 4.79
174 175 4.436998 GCAGACCACCGACGGGAG 62.437 72.222 20.00 11.40 36.97 4.30
179 180 4.323477 CCACCGACGGGAGGCAAA 62.323 66.667 20.00 0.00 37.24 3.68
182 183 2.345991 CCGACGGGAGGCAAAGAA 59.654 61.111 5.81 0.00 38.29 2.52
183 184 1.302192 CCGACGGGAGGCAAAGAAA 60.302 57.895 5.81 0.00 38.29 2.52
184 185 1.574702 CCGACGGGAGGCAAAGAAAC 61.575 60.000 5.81 0.00 38.29 2.78
185 186 1.574702 CGACGGGAGGCAAAGAAACC 61.575 60.000 0.00 0.00 38.29 3.27
186 187 1.228459 ACGGGAGGCAAAGAAACCC 60.228 57.895 0.00 0.00 37.42 4.11
187 188 1.074951 CGGGAGGCAAAGAAACCCT 59.925 57.895 0.00 0.00 38.51 4.34
188 189 0.326927 CGGGAGGCAAAGAAACCCTA 59.673 55.000 0.00 0.00 38.51 3.53
189 190 1.679032 CGGGAGGCAAAGAAACCCTAG 60.679 57.143 0.00 0.00 38.51 3.02
190 191 1.464734 GGAGGCAAAGAAACCCTAGC 58.535 55.000 0.00 0.00 0.00 3.42
191 192 1.004862 GGAGGCAAAGAAACCCTAGCT 59.995 52.381 0.00 0.00 0.00 3.32
192 193 2.555448 GGAGGCAAAGAAACCCTAGCTT 60.555 50.000 0.00 0.00 0.00 3.74
193 194 3.157881 GAGGCAAAGAAACCCTAGCTTT 58.842 45.455 0.00 0.00 32.46 3.51
196 197 5.144832 AGGCAAAGAAACCCTAGCTTTTTA 58.855 37.500 0.00 0.00 30.00 1.52
197 198 5.243954 AGGCAAAGAAACCCTAGCTTTTTAG 59.756 40.000 0.00 0.00 30.00 1.85
198 199 5.470368 GCAAAGAAACCCTAGCTTTTTAGG 58.530 41.667 0.00 0.00 39.99 2.69
205 206 3.283259 CCTAGCTTTTTAGGGGAGGTG 57.717 52.381 0.00 0.00 37.20 4.00
206 207 2.092375 CCTAGCTTTTTAGGGGAGGTGG 60.092 54.545 0.00 0.00 37.20 4.61
207 208 0.039764 AGCTTTTTAGGGGAGGTGGC 59.960 55.000 0.00 0.00 0.00 5.01
208 209 1.313091 GCTTTTTAGGGGAGGTGGCG 61.313 60.000 0.00 0.00 0.00 5.69
209 210 0.679960 CTTTTTAGGGGAGGTGGCGG 60.680 60.000 0.00 0.00 0.00 6.13
243 244 4.035675 GGACTTTAGCCTCATGCATACAAC 59.964 45.833 0.00 0.00 44.83 3.32
244 245 4.588899 ACTTTAGCCTCATGCATACAACA 58.411 39.130 0.00 0.00 44.83 3.33
276 277 6.334202 ACACCAATGTTCAAACAAACGTATT 58.666 32.000 0.00 0.00 43.03 1.89
344 345 7.621991 ACTTGCGATTTGTATCTATCTTTTCG 58.378 34.615 0.00 0.00 0.00 3.46
347 348 6.537301 TGCGATTTGTATCTATCTTTTCGGTT 59.463 34.615 0.00 0.00 0.00 4.44
355 356 8.358148 TGTATCTATCTTTTCGGTTAGATCACC 58.642 37.037 0.00 0.00 34.25 4.02
362 363 4.920640 TTCGGTTAGATCACCTCATCTC 57.079 45.455 0.00 0.00 34.75 2.75
365 366 4.339530 TCGGTTAGATCACCTCATCTCAAG 59.660 45.833 0.00 0.00 34.75 3.02
381 382 2.866156 CTCAAGCGCGGAATCTTATGAA 59.134 45.455 8.83 0.00 0.00 2.57
384 385 2.146342 AGCGCGGAATCTTATGAATGG 58.854 47.619 8.83 0.00 0.00 3.16
388 389 3.125829 CGCGGAATCTTATGAATGGATGG 59.874 47.826 0.00 0.00 0.00 3.51
404 405 7.449395 TGAATGGATGGGAAACTATGATGATTC 59.551 37.037 0.00 0.00 0.00 2.52
426 427 6.839124 TCATAGATCTGCAAATGTTGGTTT 57.161 33.333 5.18 0.00 0.00 3.27
427 428 7.936496 TCATAGATCTGCAAATGTTGGTTTA 57.064 32.000 5.18 0.00 0.00 2.01
429 430 7.392953 TCATAGATCTGCAAATGTTGGTTTACA 59.607 33.333 5.18 0.00 0.00 2.41
431 432 5.769662 AGATCTGCAAATGTTGGTTTACAGA 59.230 36.000 0.00 5.15 42.52 3.41
433 434 3.976169 TGCAAATGTTGGTTTACAGAGC 58.024 40.909 0.00 0.00 0.00 4.09
434 435 3.382865 TGCAAATGTTGGTTTACAGAGCA 59.617 39.130 0.00 0.00 33.53 4.26
435 436 4.142071 TGCAAATGTTGGTTTACAGAGCAA 60.142 37.500 0.00 0.00 33.24 3.91
440 441 0.605319 TGGTTTACAGAGCAAGGCCG 60.605 55.000 0.00 0.00 0.00 6.13
460 461 1.959282 GGGATGTGAGGATTGCATTCC 59.041 52.381 18.11 18.11 35.90 3.01
473 474 4.603989 TTGCATTCCTCAAAAAGCATCA 57.396 36.364 0.00 0.00 33.62 3.07
507 508 2.575805 AGGGAGAAAGCAGAAACCAG 57.424 50.000 0.00 0.00 0.00 4.00
560 561 2.291605 GCAATTCAAGGGTTAGGAGGGT 60.292 50.000 0.00 0.00 0.00 4.34
567 568 2.488836 AGGGTTAGGAGGGTGGTTATG 58.511 52.381 0.00 0.00 0.00 1.90
570 571 1.844497 GTTAGGAGGGTGGTTATGCCT 59.156 52.381 0.00 0.00 38.35 4.75
574 575 2.124411 GGAGGGTGGTTATGCCTCTAA 58.876 52.381 0.00 0.00 38.35 2.10
598 599 4.356492 TCCTCCTAGTCCATCAGAGATCAT 59.644 45.833 0.00 0.00 0.00 2.45
683 686 4.563337 CAGGATGCATATGGTGTCTTTG 57.437 45.455 0.00 0.00 0.00 2.77
686 689 3.947196 GGATGCATATGGTGTCTTTGTCA 59.053 43.478 0.00 0.00 0.00 3.58
687 690 4.398988 GGATGCATATGGTGTCTTTGTCAA 59.601 41.667 0.00 0.00 0.00 3.18
823 835 9.030452 ACATTGCAAAGGATTAATTAGTGGTAA 57.970 29.630 1.71 0.00 0.00 2.85
1345 1374 2.126071 CCACTCCGTACGTGCTGG 60.126 66.667 15.21 10.83 0.00 4.85
1375 1404 1.753078 GCCCCGAAATCCCCTGTTC 60.753 63.158 0.00 0.00 0.00 3.18
1382 1412 2.423538 CGAAATCCCCTGTTCAATCACC 59.576 50.000 0.00 0.00 0.00 4.02
1392 1422 0.608035 TTCAATCACCCCGTTGCCTC 60.608 55.000 0.00 0.00 0.00 4.70
1405 1435 0.102481 TTGCCTCTAGGATTCGCGAC 59.898 55.000 9.15 0.00 37.39 5.19
1420 1450 3.597255 TCGCGACGAAGATATCTAGGAT 58.403 45.455 3.71 0.00 31.06 3.24
1421 1451 4.001652 TCGCGACGAAGATATCTAGGATT 58.998 43.478 3.71 0.00 31.06 3.01
1422 1452 4.454847 TCGCGACGAAGATATCTAGGATTT 59.545 41.667 3.71 0.00 31.06 2.17
1423 1453 5.048921 TCGCGACGAAGATATCTAGGATTTT 60.049 40.000 3.71 0.00 31.06 1.82
1424 1454 5.629849 CGCGACGAAGATATCTAGGATTTTT 59.370 40.000 5.46 0.00 0.00 1.94
1518 1548 5.750352 AAATGCCAAGTCCATTTCTCATT 57.250 34.783 0.00 0.00 38.19 2.57
1580 1610 3.997681 GAGTTTACTCCTCTTGGTTCAGC 59.002 47.826 0.00 0.00 37.02 4.26
1581 1611 3.391296 AGTTTACTCCTCTTGGTTCAGCA 59.609 43.478 0.00 0.00 34.23 4.41
1582 1612 3.402628 TTACTCCTCTTGGTTCAGCAC 57.597 47.619 0.00 0.00 34.23 4.40
1583 1613 1.428869 ACTCCTCTTGGTTCAGCACT 58.571 50.000 0.00 0.00 34.23 4.40
1643 1673 1.153086 GCAGAGGTATGTGGCCCTG 60.153 63.158 0.00 0.00 0.00 4.45
1949 1982 2.285220 CGAGCTTTCCATTATCCACACG 59.715 50.000 0.00 0.00 0.00 4.49
2181 2214 3.766691 GCAATGGGGCAGTGGCAG 61.767 66.667 19.48 3.70 43.71 4.85
2195 2228 2.607892 GGCAGCTGTTGACACGGAC 61.608 63.158 16.64 0.00 33.76 4.79
2217 2250 6.295575 GGACGAATCAGATGATAAGGGAGATT 60.296 42.308 0.00 0.00 33.73 2.40
2270 2303 1.613630 TGGGGACAGGAAGAGAGGC 60.614 63.158 0.00 0.00 35.01 4.70
2354 2387 2.554032 CTGTAAGCTTGTGGACTTTGGG 59.446 50.000 9.86 0.00 0.00 4.12
2635 2669 9.787435 TGTACTCTGTTTATGACCTGTTAAATT 57.213 29.630 0.00 0.00 0.00 1.82
2690 2724 2.231235 TCGCAATCAACAGCTGACTCTA 59.769 45.455 23.35 0.83 36.69 2.43
2876 3874 7.597743 TCTCTTCTGGTTTTAGTTAAGCGTAAG 59.402 37.037 0.00 0.00 43.44 2.34
2923 3921 1.197036 GCTTGGGCTTGAAAGACGTAC 59.803 52.381 0.00 0.00 33.77 3.67
2948 3946 1.202891 AGTTTGGTTGCTACTGGGACC 60.203 52.381 0.00 0.00 0.00 4.46
3026 4030 5.450818 AAGACACCCATTTATTCCAGCTA 57.549 39.130 0.00 0.00 0.00 3.32
3029 4033 5.103940 AGACACCCATTTATTCCAGCTACAT 60.104 40.000 0.00 0.00 0.00 2.29
3131 4143 9.389755 TCATTTTAATCATGAAATAGTCACCGA 57.610 29.630 0.00 0.00 39.72 4.69
3138 4151 2.159421 TGAAATAGTCACCGACGCTCTC 60.159 50.000 0.00 0.00 37.67 3.20
3192 4213 5.157067 GCCTCTTGAATTTGTGCTAACTTC 58.843 41.667 0.00 0.00 0.00 3.01
3282 4303 7.136119 TGTTTAATAAAGTCACTTTGGCTTCG 58.864 34.615 13.39 0.00 42.19 3.79
3383 4404 8.299570 ACTAAATCCTTTATGCTGTTTGTTCTG 58.700 33.333 0.00 0.00 0.00 3.02
3386 4407 4.278170 TCCTTTATGCTGTTTGTTCTGGTG 59.722 41.667 0.00 0.00 0.00 4.17
3525 4935 7.648142 TGATTGTCAACCATGAAACTTAGTTC 58.352 34.615 0.00 0.00 37.30 3.01
3527 4937 4.513692 TGTCAACCATGAAACTTAGTTCGG 59.486 41.667 0.00 0.00 37.30 4.30
3533 4943 4.083484 CCATGAAACTTAGTTCGGAACACC 60.083 45.833 21.86 0.00 0.00 4.16
3650 5078 2.042831 GCAGGATCACCTTGCGCTT 61.043 57.895 9.73 0.00 45.36 4.68
3714 5142 6.183360 GGTGTTTGCATTTTCCTTTTTAAGCA 60.183 34.615 0.00 0.00 0.00 3.91
3751 5179 8.428186 TTGTTCGTAGTTTTGTGATATATCCC 57.572 34.615 10.25 0.00 0.00 3.85
3754 5182 8.548721 GTTCGTAGTTTTGTGATATATCCCAAG 58.451 37.037 10.25 0.00 0.00 3.61
3765 5193 7.228507 TGTGATATATCCCAAGTTGAATTTCCG 59.771 37.037 10.25 0.00 0.00 4.30
3794 5222 2.516225 GCCTTGGGTGGCCGATAC 60.516 66.667 0.00 0.00 46.82 2.24
3968 5396 1.226717 CGAGAAGCGTCCTACAGCC 60.227 63.158 0.00 0.00 34.64 4.85
3980 5408 1.079819 TACAGCCGCTCAGTTGCTC 60.080 57.895 0.00 0.00 31.77 4.26
4004 5432 2.204748 CCCATGGTTTGATGCTGGG 58.795 57.895 11.73 0.00 40.59 4.45
4040 5468 3.233980 AGAGTGCTGGCGGACACA 61.234 61.111 18.56 0.00 39.30 3.72
4159 5587 1.673168 GGCGCTTCTTCATCCAAGAT 58.327 50.000 7.64 0.00 41.02 2.40
4255 5683 2.501261 GTCTACAAGGCTCGGGTTTTT 58.499 47.619 0.00 0.00 0.00 1.94
4259 5687 0.031994 CAAGGCTCGGGTTTTTGGTG 59.968 55.000 0.00 0.00 0.00 4.17
4328 5757 5.243060 TGTGATGTGTTAGGATATCTACCCG 59.757 44.000 2.05 0.00 0.00 5.28
4457 5886 8.846943 TCTTTTGTACTATCAGAATCTGCAAA 57.153 30.769 5.18 6.40 0.00 3.68
4485 5961 6.882610 TTTGAATTGTTAGATGTGTGAGCT 57.117 33.333 0.00 0.00 0.00 4.09
4498 5974 0.666577 GTGAGCTACGTGAAAGGCGT 60.667 55.000 0.00 0.00 45.11 5.68
4504 5980 0.104487 TACGTGAAAGGCGTTGTGGA 59.896 50.000 0.00 0.00 42.85 4.02
4554 6037 7.816031 CCTGAGATACTTTTTACTGTCGGTTAA 59.184 37.037 0.00 0.00 0.00 2.01
4555 6038 8.524870 TGAGATACTTTTTACTGTCGGTTAAC 57.475 34.615 0.00 0.00 0.00 2.01
4557 6040 7.444299 AGATACTTTTTACTGTCGGTTAACCA 58.556 34.615 24.14 8.89 35.14 3.67
4558 6041 8.098912 AGATACTTTTTACTGTCGGTTAACCAT 58.901 33.333 24.14 4.85 35.14 3.55
4560 6043 9.723601 ATACTTTTTACTGTCGGTTAACCATAA 57.276 29.630 24.14 10.83 35.14 1.90
4561 6044 8.091385 ACTTTTTACTGTCGGTTAACCATAAG 57.909 34.615 24.14 18.04 35.14 1.73
4566 6049 4.992951 ACTGTCGGTTAACCATAAGTTCAC 59.007 41.667 24.14 7.52 40.05 3.18
4568 6051 5.232463 TGTCGGTTAACCATAAGTTCACTC 58.768 41.667 24.14 0.00 40.05 3.51
4573 6056 5.246307 GTTAACCATAAGTTCACTCTGGCT 58.754 41.667 7.96 0.93 40.05 4.75
4579 6180 5.525378 CCATAAGTTCACTCTGGCTGTATTC 59.475 44.000 0.00 0.00 0.00 1.75
4586 6187 4.118410 CACTCTGGCTGTATTCTGCTAAG 58.882 47.826 1.48 1.00 38.34 2.18
4588 6189 4.653341 ACTCTGGCTGTATTCTGCTAAGAT 59.347 41.667 1.48 0.00 38.34 2.40
4589 6190 5.207110 TCTGGCTGTATTCTGCTAAGATC 57.793 43.478 1.48 0.00 38.34 2.75
4590 6191 3.982475 TGGCTGTATTCTGCTAAGATCG 58.018 45.455 1.48 0.00 38.34 3.69
4591 6192 3.636764 TGGCTGTATTCTGCTAAGATCGA 59.363 43.478 0.00 0.00 38.34 3.59
4592 6193 4.099419 TGGCTGTATTCTGCTAAGATCGAA 59.901 41.667 0.00 0.00 38.34 3.71
4593 6194 5.221521 TGGCTGTATTCTGCTAAGATCGAAT 60.222 40.000 0.00 0.00 38.34 3.34
4605 6211 6.646653 TGCTAAGATCGAATAATAAGGTGCTG 59.353 38.462 0.00 0.00 0.00 4.41
4627 6234 6.516527 GCTGATTGTGTTTGGGTAATTTGAGA 60.517 38.462 0.00 0.00 0.00 3.27
4659 6266 2.278596 CTACGCCCGGTGATGTCG 60.279 66.667 4.58 0.00 0.00 4.35
4680 6287 8.357796 TGTCGATCAAAATGATATCTTCACTC 57.642 34.615 3.98 0.00 37.20 3.51
4681 6288 8.200120 TGTCGATCAAAATGATATCTTCACTCT 58.800 33.333 3.98 0.00 37.20 3.24
4696 6303 7.351414 TCTTCACTCTAATGAATGTTCAACG 57.649 36.000 0.00 0.00 41.13 4.10
4727 6335 5.277601 GCGTTTGCAGAGTAATCTTAACA 57.722 39.130 0.00 0.00 42.15 2.41
4779 6391 2.103388 GTTTGTGTACAAAACGACGCC 58.897 47.619 11.38 0.00 46.08 5.68
5064 6695 4.760047 ATCGCCGTCCACCTGCAC 62.760 66.667 0.00 0.00 0.00 4.57
5082 6713 1.683385 CACACAGACAGAGGAGACACA 59.317 52.381 0.00 0.00 0.00 3.72
5096 6727 1.134907 AGACACAAACGGACGAACACT 60.135 47.619 0.00 0.00 0.00 3.55
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.208890 GGCTCCCTAAAAATGGAATAAGGT 58.791 41.667 0.00 0.00 0.00 3.50
2 3 4.261614 GCGGCTCCCTAAAAATGGAATAAG 60.262 45.833 0.00 0.00 0.00 1.73
3 4 3.634910 GCGGCTCCCTAAAAATGGAATAA 59.365 43.478 0.00 0.00 0.00 1.40
4 5 3.219281 GCGGCTCCCTAAAAATGGAATA 58.781 45.455 0.00 0.00 0.00 1.75
6 7 1.470051 GCGGCTCCCTAAAAATGGAA 58.530 50.000 0.00 0.00 0.00 3.53
8 9 0.682855 TGGCGGCTCCCTAAAAATGG 60.683 55.000 11.43 0.00 0.00 3.16
9 10 0.455815 GTGGCGGCTCCCTAAAAATG 59.544 55.000 11.43 0.00 0.00 2.32
10 11 0.683179 GGTGGCGGCTCCCTAAAAAT 60.683 55.000 18.61 0.00 0.00 1.82
11 12 1.303806 GGTGGCGGCTCCCTAAAAA 60.304 57.895 18.61 0.00 0.00 1.94
12 13 2.353573 GGTGGCGGCTCCCTAAAA 59.646 61.111 18.61 0.00 0.00 1.52
13 14 4.090588 CGGTGGCGGCTCCCTAAA 62.091 66.667 22.62 0.00 0.00 1.85
26 27 0.179134 CTAAGGAAGACGAGGCGGTG 60.179 60.000 0.00 0.00 0.00 4.94
27 28 1.946475 GCTAAGGAAGACGAGGCGGT 61.946 60.000 0.00 0.00 0.00 5.68
28 29 1.227002 GCTAAGGAAGACGAGGCGG 60.227 63.158 0.00 0.00 0.00 6.13
29 30 0.526524 CTGCTAAGGAAGACGAGGCG 60.527 60.000 0.00 0.00 0.00 5.52
30 31 3.354131 CTGCTAAGGAAGACGAGGC 57.646 57.895 0.00 0.00 0.00 4.70
40 41 1.630878 AGGGTTTCTGTCCTGCTAAGG 59.369 52.381 0.00 0.00 46.06 2.69
41 42 4.254492 GTTAGGGTTTCTGTCCTGCTAAG 58.746 47.826 0.00 0.00 34.75 2.18
42 43 3.649023 TGTTAGGGTTTCTGTCCTGCTAA 59.351 43.478 0.00 0.00 34.75 3.09
44 45 2.054799 TGTTAGGGTTTCTGTCCTGCT 58.945 47.619 0.00 0.00 34.75 4.24
45 46 2.561478 TGTTAGGGTTTCTGTCCTGC 57.439 50.000 0.00 0.00 34.75 4.85
46 47 4.887655 AGTTTTGTTAGGGTTTCTGTCCTG 59.112 41.667 0.00 0.00 34.75 3.86
47 48 5.125367 AGTTTTGTTAGGGTTTCTGTCCT 57.875 39.130 0.00 0.00 37.18 3.85
49 50 4.812626 TCGAGTTTTGTTAGGGTTTCTGTC 59.187 41.667 0.00 0.00 0.00 3.51
50 51 4.773013 TCGAGTTTTGTTAGGGTTTCTGT 58.227 39.130 0.00 0.00 0.00 3.41
51 52 5.526111 TCTTCGAGTTTTGTTAGGGTTTCTG 59.474 40.000 0.00 0.00 0.00 3.02
52 53 5.677567 TCTTCGAGTTTTGTTAGGGTTTCT 58.322 37.500 0.00 0.00 0.00 2.52
53 54 5.996669 TCTTCGAGTTTTGTTAGGGTTTC 57.003 39.130 0.00 0.00 0.00 2.78
55 56 6.117488 TCTTTCTTCGAGTTTTGTTAGGGTT 58.883 36.000 0.00 0.00 0.00 4.11
56 57 5.677567 TCTTTCTTCGAGTTTTGTTAGGGT 58.322 37.500 0.00 0.00 0.00 4.34
57 58 6.651225 AGATCTTTCTTCGAGTTTTGTTAGGG 59.349 38.462 0.00 0.00 0.00 3.53
58 59 7.659652 AGATCTTTCTTCGAGTTTTGTTAGG 57.340 36.000 0.00 0.00 0.00 2.69
62 63 9.717892 GTTTTTAGATCTTTCTTCGAGTTTTGT 57.282 29.630 0.00 0.00 33.17 2.83
63 64 8.883168 CGTTTTTAGATCTTTCTTCGAGTTTTG 58.117 33.333 0.00 0.00 33.17 2.44
64 65 8.068380 CCGTTTTTAGATCTTTCTTCGAGTTTT 58.932 33.333 0.00 0.00 33.17 2.43
65 66 7.440255 TCCGTTTTTAGATCTTTCTTCGAGTTT 59.560 33.333 0.00 0.00 33.17 2.66
66 67 6.927381 TCCGTTTTTAGATCTTTCTTCGAGTT 59.073 34.615 0.00 0.00 33.17 3.01
67 68 6.453092 TCCGTTTTTAGATCTTTCTTCGAGT 58.547 36.000 0.00 0.00 33.17 4.18
68 69 6.454450 GCTCCGTTTTTAGATCTTTCTTCGAG 60.454 42.308 0.00 0.02 33.17 4.04
69 70 5.347907 GCTCCGTTTTTAGATCTTTCTTCGA 59.652 40.000 0.00 0.00 33.17 3.71
70 71 5.446073 GGCTCCGTTTTTAGATCTTTCTTCG 60.446 44.000 0.00 1.56 33.17 3.79
71 72 5.163744 GGGCTCCGTTTTTAGATCTTTCTTC 60.164 44.000 0.00 0.00 33.17 2.87
72 73 4.700692 GGGCTCCGTTTTTAGATCTTTCTT 59.299 41.667 0.00 0.00 33.17 2.52
73 74 4.019231 AGGGCTCCGTTTTTAGATCTTTCT 60.019 41.667 0.00 0.00 35.90 2.52
74 75 4.262617 AGGGCTCCGTTTTTAGATCTTTC 58.737 43.478 0.00 0.00 0.00 2.62
75 76 4.262617 GAGGGCTCCGTTTTTAGATCTTT 58.737 43.478 0.00 0.00 0.00 2.52
76 77 3.370633 GGAGGGCTCCGTTTTTAGATCTT 60.371 47.826 0.00 0.00 40.36 2.40
77 78 2.170817 GGAGGGCTCCGTTTTTAGATCT 59.829 50.000 0.00 0.00 40.36 2.75
78 79 2.562635 GGAGGGCTCCGTTTTTAGATC 58.437 52.381 0.00 0.00 40.36 2.75
90 91 4.106925 CTGCTGGTGGGAGGGCTC 62.107 72.222 0.00 0.00 0.00 4.70
95 96 1.856539 ATGGTTCCTGCTGGTGGGAG 61.857 60.000 9.73 0.00 32.80 4.30
97 98 1.679977 CATGGTTCCTGCTGGTGGG 60.680 63.158 9.73 0.00 34.23 4.61
98 99 0.033796 ATCATGGTTCCTGCTGGTGG 60.034 55.000 9.73 0.00 34.23 4.61
99 100 1.386533 GATCATGGTTCCTGCTGGTG 58.613 55.000 9.73 0.16 34.23 4.17
100 101 0.257039 GGATCATGGTTCCTGCTGGT 59.743 55.000 9.73 0.00 34.23 4.00
101 102 0.256752 TGGATCATGGTTCCTGCTGG 59.743 55.000 14.33 2.58 34.17 4.85
102 103 1.064906 AGTGGATCATGGTTCCTGCTG 60.065 52.381 14.33 0.00 34.17 4.41
104 105 1.211457 AGAGTGGATCATGGTTCCTGC 59.789 52.381 14.33 8.84 34.17 4.85
105 106 2.238144 ACAGAGTGGATCATGGTTCCTG 59.762 50.000 14.33 3.03 34.17 3.86
108 109 3.274288 GGAACAGAGTGGATCATGGTTC 58.726 50.000 0.00 0.00 36.13 3.62
110 111 1.561542 GGGAACAGAGTGGATCATGGT 59.438 52.381 0.00 0.00 0.00 3.55
111 112 1.561076 TGGGAACAGAGTGGATCATGG 59.439 52.381 0.00 0.00 35.01 3.66
125 126 0.179081 GGCCGTAGAGTCATGGGAAC 60.179 60.000 0.00 0.00 0.00 3.62
126 127 1.672854 CGGCCGTAGAGTCATGGGAA 61.673 60.000 19.50 0.00 0.00 3.97
127 128 2.125326 CGGCCGTAGAGTCATGGGA 61.125 63.158 19.50 0.00 0.00 4.37
128 129 2.417516 CGGCCGTAGAGTCATGGG 59.582 66.667 19.50 0.00 0.00 4.00
129 130 2.279517 GCGGCCGTAGAGTCATGG 60.280 66.667 28.70 0.00 0.00 3.66
130 131 1.589993 CTGCGGCCGTAGAGTCATG 60.590 63.158 36.37 9.86 0.00 3.07
131 132 2.786495 CCTGCGGCCGTAGAGTCAT 61.786 63.158 40.08 0.00 0.00 3.06
132 133 3.449227 CCTGCGGCCGTAGAGTCA 61.449 66.667 40.08 21.39 0.00 3.41
133 134 3.127352 CTCCTGCGGCCGTAGAGTC 62.127 68.421 40.08 17.73 0.00 3.36
135 136 2.829003 TCTCCTGCGGCCGTAGAG 60.829 66.667 40.08 32.02 0.00 2.43
136 137 3.138798 GTCTCCTGCGGCCGTAGA 61.139 66.667 40.08 26.40 0.00 2.59
137 138 4.554363 CGTCTCCTGCGGCCGTAG 62.554 72.222 33.36 33.36 0.00 3.51
143 144 4.504916 CTGCCTCGTCTCCTGCGG 62.505 72.222 0.00 0.00 0.00 5.69
144 145 3.443925 TCTGCCTCGTCTCCTGCG 61.444 66.667 0.00 0.00 0.00 5.18
145 146 2.183046 GTCTGCCTCGTCTCCTGC 59.817 66.667 0.00 0.00 0.00 4.85
146 147 1.979155 TGGTCTGCCTCGTCTCCTG 60.979 63.158 0.00 0.00 35.27 3.86
147 148 1.979693 GTGGTCTGCCTCGTCTCCT 60.980 63.158 0.00 0.00 35.27 3.69
148 149 2.574399 GTGGTCTGCCTCGTCTCC 59.426 66.667 0.00 0.00 35.27 3.71
149 150 2.574399 GGTGGTCTGCCTCGTCTC 59.426 66.667 0.00 0.00 35.27 3.36
150 151 3.374402 CGGTGGTCTGCCTCGTCT 61.374 66.667 0.00 0.00 35.27 4.18
151 152 3.371063 TCGGTGGTCTGCCTCGTC 61.371 66.667 0.00 0.00 35.13 4.20
152 153 3.681835 GTCGGTGGTCTGCCTCGT 61.682 66.667 0.00 0.00 35.13 4.18
153 154 4.778415 CGTCGGTGGTCTGCCTCG 62.778 72.222 0.00 0.00 35.27 4.63
154 155 4.436998 CCGTCGGTGGTCTGCCTC 62.437 72.222 2.08 0.00 35.27 4.70
157 158 4.436998 CTCCCGTCGGTGGTCTGC 62.437 72.222 11.06 0.00 0.00 4.26
158 159 3.760035 CCTCCCGTCGGTGGTCTG 61.760 72.222 11.06 0.00 37.92 3.51
162 163 4.323477 TTTGCCTCCCGTCGGTGG 62.323 66.667 11.06 12.90 44.47 4.61
163 164 2.725203 TTCTTTGCCTCCCGTCGGTG 62.725 60.000 11.06 1.77 0.00 4.94
164 165 2.047213 TTTCTTTGCCTCCCGTCGGT 62.047 55.000 11.06 0.00 0.00 4.69
165 166 1.302192 TTTCTTTGCCTCCCGTCGG 60.302 57.895 3.60 3.60 0.00 4.79
166 167 1.574702 GGTTTCTTTGCCTCCCGTCG 61.575 60.000 0.00 0.00 0.00 5.12
167 168 1.241990 GGGTTTCTTTGCCTCCCGTC 61.242 60.000 0.00 0.00 0.00 4.79
168 169 1.228459 GGGTTTCTTTGCCTCCCGT 60.228 57.895 0.00 0.00 0.00 5.28
169 170 0.326927 TAGGGTTTCTTTGCCTCCCG 59.673 55.000 0.00 0.00 42.57 5.14
171 172 1.004862 AGCTAGGGTTTCTTTGCCTCC 59.995 52.381 0.00 0.00 0.00 4.30
172 173 2.498644 AGCTAGGGTTTCTTTGCCTC 57.501 50.000 0.00 0.00 0.00 4.70
174 175 4.336889 AAAAAGCTAGGGTTTCTTTGCC 57.663 40.909 0.00 0.00 31.82 4.52
175 176 5.470368 CCTAAAAAGCTAGGGTTTCTTTGC 58.530 41.667 0.00 0.00 35.67 3.68
185 186 2.092375 CCACCTCCCCTAAAAAGCTAGG 60.092 54.545 0.00 0.00 38.61 3.02
186 187 2.684038 GCCACCTCCCCTAAAAAGCTAG 60.684 54.545 0.00 0.00 0.00 3.42
187 188 1.283905 GCCACCTCCCCTAAAAAGCTA 59.716 52.381 0.00 0.00 0.00 3.32
188 189 0.039764 GCCACCTCCCCTAAAAAGCT 59.960 55.000 0.00 0.00 0.00 3.74
189 190 1.313091 CGCCACCTCCCCTAAAAAGC 61.313 60.000 0.00 0.00 0.00 3.51
190 191 0.679960 CCGCCACCTCCCCTAAAAAG 60.680 60.000 0.00 0.00 0.00 2.27
191 192 1.381076 CCGCCACCTCCCCTAAAAA 59.619 57.895 0.00 0.00 0.00 1.94
192 193 3.083386 CCGCCACCTCCCCTAAAA 58.917 61.111 0.00 0.00 0.00 1.52
193 194 3.723922 GCCGCCACCTCCCCTAAA 61.724 66.667 0.00 0.00 0.00 1.85
198 199 4.864334 CATGAGCCGCCACCTCCC 62.864 72.222 0.00 0.00 0.00 4.30
202 203 2.045926 ACTTCATGAGCCGCCACC 60.046 61.111 0.00 0.00 0.00 4.61
203 204 2.401766 CCACTTCATGAGCCGCCAC 61.402 63.158 0.00 0.00 0.00 5.01
204 205 2.046023 CCACTTCATGAGCCGCCA 60.046 61.111 0.00 0.00 0.00 5.69
205 206 2.109126 GTCCACTTCATGAGCCGCC 61.109 63.158 0.00 0.00 0.00 6.13
206 207 0.674895 AAGTCCACTTCATGAGCCGC 60.675 55.000 0.00 0.00 0.00 6.53
207 208 1.813513 AAAGTCCACTTCATGAGCCG 58.186 50.000 0.00 0.00 34.61 5.52
208 209 2.680339 GCTAAAGTCCACTTCATGAGCC 59.320 50.000 0.00 0.00 34.61 4.70
209 210 2.680339 GGCTAAAGTCCACTTCATGAGC 59.320 50.000 0.00 0.78 34.61 4.26
276 277 6.017026 TGCAAAAATTATGTTGTACCTCGTGA 60.017 34.615 0.00 0.00 0.00 4.35
344 345 4.376146 GCTTGAGATGAGGTGATCTAACC 58.624 47.826 0.00 0.00 40.85 2.85
347 348 2.035193 GCGCTTGAGATGAGGTGATCTA 59.965 50.000 0.00 0.00 32.57 1.98
355 356 0.857935 GATTCCGCGCTTGAGATGAG 59.142 55.000 5.56 0.00 0.00 2.90
362 363 3.548587 CATTCATAAGATTCCGCGCTTG 58.451 45.455 5.56 0.00 0.00 4.01
365 366 2.143122 TCCATTCATAAGATTCCGCGC 58.857 47.619 0.00 0.00 0.00 6.86
381 382 6.855667 TGAATCATCATAGTTTCCCATCCAT 58.144 36.000 0.00 0.00 0.00 3.41
404 405 7.537715 TGTAAACCAACATTTGCAGATCTATG 58.462 34.615 0.00 0.00 31.58 2.23
413 414 3.976169 TGCTCTGTAAACCAACATTTGC 58.024 40.909 0.00 0.00 0.00 3.68
426 427 1.689233 ATCCCGGCCTTGCTCTGTA 60.689 57.895 0.00 0.00 0.00 2.74
427 428 3.011517 ATCCCGGCCTTGCTCTGT 61.012 61.111 0.00 0.00 0.00 3.41
429 430 3.011517 ACATCCCGGCCTTGCTCT 61.012 61.111 0.00 0.00 0.00 4.09
431 432 3.329889 TCACATCCCGGCCTTGCT 61.330 61.111 0.00 0.00 0.00 3.91
433 434 1.987807 ATCCTCACATCCCGGCCTTG 61.988 60.000 0.00 0.00 0.00 3.61
434 435 1.281925 AATCCTCACATCCCGGCCTT 61.282 55.000 0.00 0.00 0.00 4.35
435 436 1.694169 AATCCTCACATCCCGGCCT 60.694 57.895 0.00 0.00 0.00 5.19
440 441 1.959282 GGAATGCAATCCTCACATCCC 59.041 52.381 13.89 0.00 36.50 3.85
460 461 7.424001 GGAAAGAGGATATGATGCTTTTTGAG 58.576 38.462 1.99 0.00 35.67 3.02
473 474 5.705175 TTCTCCCTAGGGAAAGAGGATAT 57.295 43.478 30.59 0.00 44.66 1.63
507 508 3.665190 AGATCGAACCTCCACTTGTTTC 58.335 45.455 0.00 0.00 0.00 2.78
560 561 3.941629 AGGAGGATTAGAGGCATAACCA 58.058 45.455 0.00 0.00 43.14 3.67
567 568 3.246416 TGGACTAGGAGGATTAGAGGC 57.754 52.381 0.00 0.00 0.00 4.70
570 571 5.613116 TCTCTGATGGACTAGGAGGATTAGA 59.387 44.000 0.00 0.00 0.00 2.10
574 575 4.356492 TGATCTCTGATGGACTAGGAGGAT 59.644 45.833 0.00 0.00 0.00 3.24
664 667 3.947196 TGACAAAGACACCATATGCATCC 59.053 43.478 0.19 0.00 0.00 3.51
687 690 9.449719 ACCTTCGTGAAATTGAAATAGTAAGAT 57.550 29.630 0.00 0.00 0.00 2.40
744 754 0.712380 AATCTGTGGCCCAGGGAATT 59.288 50.000 10.89 9.85 41.83 2.17
745 755 1.496429 CTAATCTGTGGCCCAGGGAAT 59.504 52.381 10.89 5.16 41.83 3.01
746 756 0.918983 CTAATCTGTGGCCCAGGGAA 59.081 55.000 10.89 0.00 41.83 3.97
747 757 0.253160 ACTAATCTGTGGCCCAGGGA 60.253 55.000 10.89 4.65 41.83 4.20
749 759 2.505819 ACTAACTAATCTGTGGCCCAGG 59.494 50.000 17.89 7.30 41.83 4.45
750 760 3.452627 AGACTAACTAATCTGTGGCCCAG 59.547 47.826 13.43 13.43 42.97 4.45
751 761 3.197766 CAGACTAACTAATCTGTGGCCCA 59.802 47.826 0.00 0.00 38.03 5.36
795 806 7.818930 ACCACTAATTAATCCTTTGCAATGTTG 59.181 33.333 0.00 0.00 0.00 3.33
797 808 7.480760 ACCACTAATTAATCCTTTGCAATGT 57.519 32.000 0.00 0.00 0.00 2.71
958 974 1.838073 CTTTCTGGTGGGTAGGCCGT 61.838 60.000 0.00 0.00 34.97 5.68
959 975 1.078426 CTTTCTGGTGGGTAGGCCG 60.078 63.158 0.00 0.00 34.97 6.13
960 976 1.378646 GCTTTCTGGTGGGTAGGCC 60.379 63.158 0.00 0.00 0.00 5.19
961 977 1.745489 CGCTTTCTGGTGGGTAGGC 60.745 63.158 0.00 0.00 0.00 3.93
962 978 1.078426 CCGCTTTCTGGTGGGTAGG 60.078 63.158 0.00 0.00 33.59 3.18
963 979 1.745489 GCCGCTTTCTGGTGGGTAG 60.745 63.158 0.00 0.00 37.35 3.18
964 980 2.349755 GCCGCTTTCTGGTGGGTA 59.650 61.111 0.00 0.00 37.35 3.69
1360 1389 2.423538 GTGATTGAACAGGGGATTTCGG 59.576 50.000 0.00 0.00 0.00 4.30
1375 1404 0.251916 TAGAGGCAACGGGGTGATTG 59.748 55.000 0.00 0.00 46.39 2.67
1382 1412 0.249489 CGAATCCTAGAGGCAACGGG 60.249 60.000 0.00 0.00 46.39 5.28
1392 1422 2.690173 ATCTTCGTCGCGAATCCTAG 57.310 50.000 12.06 4.45 44.85 3.02
1424 1454 3.248363 CGCTGCATCCAGATCGATAAAAA 59.752 43.478 0.00 0.00 41.77 1.94
1425 1455 2.802247 CGCTGCATCCAGATCGATAAAA 59.198 45.455 0.00 0.00 41.77 1.52
1426 1456 2.407090 CGCTGCATCCAGATCGATAAA 58.593 47.619 0.00 0.00 41.77 1.40
1427 1457 1.337167 CCGCTGCATCCAGATCGATAA 60.337 52.381 0.00 0.00 41.77 1.75
1580 1610 2.281276 TGGACAGCAGCAGCAGTG 60.281 61.111 3.31 0.00 40.89 3.66
1581 1611 2.032223 CTGGACAGCAGCAGCAGT 59.968 61.111 3.17 0.03 43.74 4.40
1582 1612 2.032223 ACTGGACAGCAGCAGCAG 59.968 61.111 3.17 0.00 45.49 4.24
1583 1613 2.281276 CACTGGACAGCAGCAGCA 60.281 61.111 3.17 0.00 45.49 4.41
1643 1673 1.669115 TGCGCTCTTCTGCACCTTC 60.669 57.895 9.73 0.00 35.90 3.46
1949 1982 6.315891 GCAATATATTCTCAGGCTTCAGATCC 59.684 42.308 0.00 0.00 0.00 3.36
2086 2119 1.115467 CCTGGTGAGGCCACTACTAG 58.885 60.000 5.01 7.97 43.61 2.57
2087 2120 0.708209 TCCTGGTGAGGCCACTACTA 59.292 55.000 5.01 0.00 43.61 1.82
2181 2214 0.438830 GATTCGTCCGTGTCAACAGC 59.561 55.000 0.00 0.00 0.00 4.40
2195 2228 7.157347 TCAAATCTCCCTTATCATCTGATTCG 58.843 38.462 0.00 0.00 36.05 3.34
2217 2250 2.224744 TGCCCTCATTTGCTGTACTCAA 60.225 45.455 0.00 0.00 0.00 3.02
2336 2369 3.586470 TTCCCAAAGTCCACAAGCTTA 57.414 42.857 0.00 0.00 0.00 3.09
2342 2375 1.894466 CATGCATTCCCAAAGTCCACA 59.106 47.619 0.00 0.00 0.00 4.17
2354 2387 3.747193 CTTGTACGTCCAACATGCATTC 58.253 45.455 0.00 0.00 0.00 2.67
2690 2724 4.904251 AGAGTGCTGGAATGTAGGTATCAT 59.096 41.667 0.00 0.00 0.00 2.45
2876 3874 8.295288 CCAGCTATCATTAAAAGATTGGTGATC 58.705 37.037 23.16 0.00 44.00 2.92
2923 3921 2.352030 CCAGTAGCAACCAAACTGCATG 60.352 50.000 0.00 0.00 42.48 4.06
2948 3946 2.672651 TGGGCCATGACTTGTGCG 60.673 61.111 0.00 0.00 0.00 5.34
3131 4143 2.740981 CAGAAATTGCAAGAGAGAGCGT 59.259 45.455 4.94 0.00 0.00 5.07
3138 4151 8.653338 CATAATTGTTTCCAGAAATTGCAAGAG 58.347 33.333 4.94 0.00 32.36 2.85
3251 4272 8.487176 CCAAAGTGACTTTATTAAACATGTTGC 58.513 33.333 12.82 0.00 31.96 4.17
3525 4935 8.723311 TCTACTTTTAATTTGTATGGTGTTCCG 58.277 33.333 0.00 0.00 36.30 4.30
3587 5015 9.007901 AGAATGAACTCCAAAATGAGAGTAAAG 57.992 33.333 0.00 0.00 42.48 1.85
3650 5078 6.470278 CATCATTCCAAGTAGCTCCATCATA 58.530 40.000 0.00 0.00 0.00 2.15
3746 5174 6.041069 ACAAAACGGAAATTCAACTTGGGATA 59.959 34.615 0.00 0.00 0.00 2.59
3751 5179 8.479280 CAATCTACAAAACGGAAATTCAACTTG 58.521 33.333 0.00 0.00 0.00 3.16
3754 5182 6.128929 GGCAATCTACAAAACGGAAATTCAAC 60.129 38.462 0.00 0.00 0.00 3.18
3765 5193 3.306019 CCACCCAAGGCAATCTACAAAAC 60.306 47.826 0.00 0.00 0.00 2.43
3794 5222 3.822996 ACGATTGAAGTAGTCACGTGAG 58.177 45.455 20.73 4.93 37.51 3.51
3980 5408 0.533491 CATCAAACCATGGGTGCTGG 59.467 55.000 18.09 0.30 35.34 4.85
4139 5567 0.740868 TCTTGGATGAAGAAGCGCCG 60.741 55.000 2.29 0.00 37.78 6.46
4159 5587 1.965414 TGCTTGGGGATCCTTCACTA 58.035 50.000 12.58 0.00 0.00 2.74
4199 5627 4.567159 CACTTCTTAGAAGGCGTACCATTC 59.433 45.833 23.72 1.89 39.06 2.67
4255 5683 2.306805 ACTCATGGAGCAATCTTCACCA 59.693 45.455 0.00 0.00 28.73 4.17
4328 5757 2.671888 GGCCTACTACTCTTTTTCGCAC 59.328 50.000 0.00 0.00 0.00 5.34
4470 5899 4.092771 TCACGTAGCTCACACATCTAAC 57.907 45.455 0.00 0.00 0.00 2.34
4471 5900 4.776795 TTCACGTAGCTCACACATCTAA 57.223 40.909 0.00 0.00 0.00 2.10
4473 5902 3.579709 CTTTCACGTAGCTCACACATCT 58.420 45.455 0.00 0.00 0.00 2.90
4474 5903 2.668457 CCTTTCACGTAGCTCACACATC 59.332 50.000 0.00 0.00 0.00 3.06
4478 5954 0.666274 CGCCTTTCACGTAGCTCACA 60.666 55.000 0.00 0.00 0.00 3.58
4483 5959 0.110823 CACAACGCCTTTCACGTAGC 60.111 55.000 0.00 0.00 44.30 3.58
4485 5961 0.104487 TCCACAACGCCTTTCACGTA 59.896 50.000 0.00 0.00 44.30 3.57
4498 5974 1.421268 AGACAGCCTCACAATCCACAA 59.579 47.619 0.00 0.00 0.00 3.33
4504 5980 0.036010 CCGGAAGACAGCCTCACAAT 60.036 55.000 0.00 0.00 0.00 2.71
4554 6037 2.639839 ACAGCCAGAGTGAACTTATGGT 59.360 45.455 13.91 3.02 36.24 3.55
4555 6038 3.340814 ACAGCCAGAGTGAACTTATGG 57.659 47.619 9.99 9.99 36.66 2.74
4557 6040 6.344500 CAGAATACAGCCAGAGTGAACTTAT 58.656 40.000 0.00 0.00 0.00 1.73
4558 6041 5.724328 CAGAATACAGCCAGAGTGAACTTA 58.276 41.667 0.00 0.00 0.00 2.24
4560 6043 3.618507 GCAGAATACAGCCAGAGTGAACT 60.619 47.826 0.00 0.00 0.00 3.01
4561 6044 2.675348 GCAGAATACAGCCAGAGTGAAC 59.325 50.000 0.00 0.00 0.00 3.18
4566 6049 4.662468 TCTTAGCAGAATACAGCCAGAG 57.338 45.455 0.00 0.00 0.00 3.35
4568 6051 3.986572 CGATCTTAGCAGAATACAGCCAG 59.013 47.826 0.00 0.00 30.76 4.85
4579 6180 6.870965 AGCACCTTATTATTCGATCTTAGCAG 59.129 38.462 0.00 0.00 0.00 4.24
4586 6187 7.041780 ACACAATCAGCACCTTATTATTCGATC 60.042 37.037 0.00 0.00 0.00 3.69
4588 6189 6.112734 ACACAATCAGCACCTTATTATTCGA 58.887 36.000 0.00 0.00 0.00 3.71
4589 6190 6.363577 ACACAATCAGCACCTTATTATTCG 57.636 37.500 0.00 0.00 0.00 3.34
4590 6191 7.489113 CCAAACACAATCAGCACCTTATTATTC 59.511 37.037 0.00 0.00 0.00 1.75
4591 6192 7.322664 CCAAACACAATCAGCACCTTATTATT 58.677 34.615 0.00 0.00 0.00 1.40
4592 6193 6.127366 CCCAAACACAATCAGCACCTTATTAT 60.127 38.462 0.00 0.00 0.00 1.28
4593 6194 5.184864 CCCAAACACAATCAGCACCTTATTA 59.815 40.000 0.00 0.00 0.00 0.98
4605 6211 7.329226 CACATCTCAAATTACCCAAACACAATC 59.671 37.037 0.00 0.00 0.00 2.67
4680 6287 4.154015 TGGAGTGCGTTGAACATTCATTAG 59.846 41.667 0.00 0.00 37.00 1.73
4681 6288 4.068599 TGGAGTGCGTTGAACATTCATTA 58.931 39.130 0.00 0.00 37.00 1.90
4688 6295 1.948508 GCATGGAGTGCGTTGAACA 59.051 52.632 0.00 0.00 45.23 3.18
4727 6335 2.496679 TAGCCTAGCCCCAGAATTCT 57.503 50.000 0.88 0.88 0.00 2.40
4757 6365 3.162068 GCGTCGTTTTGTACACAAACAA 58.838 40.909 22.17 10.32 44.56 2.83
4799 6411 1.777878 TCTACCAAGAACCCTTTGCCA 59.222 47.619 0.00 0.00 0.00 4.92
5064 6695 3.126831 GTTTGTGTCTCCTCTGTCTGTG 58.873 50.000 0.00 0.00 0.00 3.66
5082 6713 1.854126 CGTAACAGTGTTCGTCCGTTT 59.146 47.619 12.82 0.00 0.00 3.60
5112 6743 1.573829 GAGATCGCGTGGTTTTGCCA 61.574 55.000 5.77 0.00 46.95 4.92
5145 6776 1.228657 GCCTTTCTCTTTCACGCCGT 61.229 55.000 0.00 0.00 0.00 5.68
5256 6887 3.744719 CTTCGACTCCACCGCGGA 61.745 66.667 35.90 8.90 43.61 5.54
5257 6888 3.277211 TTCTTCGACTCCACCGCGG 62.277 63.158 26.86 26.86 0.00 6.46


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.