Multiple sequence alignment - TraesCS5B01G385500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G385500 chr5B 100.000 2332 0 0 835 3166 565099780 565097449 0.000000e+00 4307.0
1 TraesCS5B01G385500 chr5B 88.259 1712 127 24 923 2590 565154445 565152764 0.000000e+00 1980.0
2 TraesCS5B01G385500 chr5B 80.957 1150 193 20 1070 2212 565687281 565686151 0.000000e+00 887.0
3 TraesCS5B01G385500 chr5B 79.064 1261 209 41 1101 2335 565546631 565545400 0.000000e+00 815.0
4 TraesCS5B01G385500 chr5B 79.735 1130 214 9 1068 2190 565493152 565492031 0.000000e+00 804.0
5 TraesCS5B01G385500 chr5B 79.530 1021 177 23 1119 2135 565426224 565425232 0.000000e+00 699.0
6 TraesCS5B01G385500 chr5B 100.000 337 0 0 1 337 565100614 565100278 9.640000e-175 623.0
7 TraesCS5B01G385500 chr5B 77.661 667 133 13 1103 1761 565360868 565360210 2.960000e-105 392.0
8 TraesCS5B01G385500 chr5B 91.844 282 15 4 58 337 694031961 694031686 1.380000e-103 387.0
9 TraesCS5B01G385500 chr5B 88.214 280 23 6 60 337 610112093 610111822 3.050000e-85 326.0
10 TraesCS5B01G385500 chr5B 91.011 178 10 2 2585 2762 565152637 565152466 5.280000e-58 235.0
11 TraesCS5B01G385500 chr5B 97.802 91 2 0 1 91 144800265 144800355 1.180000e-34 158.0
12 TraesCS5B01G385500 chr5A 90.517 1624 93 23 856 2451 579399690 579401280 0.000000e+00 2089.0
13 TraesCS5B01G385500 chr5A 77.984 1131 227 16 1069 2190 580201313 580200196 0.000000e+00 689.0
14 TraesCS5B01G385500 chr5A 79.528 889 148 22 1013 1881 579242584 579243458 1.260000e-168 603.0
15 TraesCS5B01G385500 chr5A 86.538 208 28 0 1069 1276 580212978 580212771 2.460000e-56 230.0
16 TraesCS5B01G385500 chr5A 82.474 97 11 6 2806 2899 694880990 694880897 2.620000e-11 80.5
17 TraesCS5B01G385500 chr5A 94.737 38 2 0 2985 3022 579408816 579408853 3.410000e-05 60.2
18 TraesCS5B01G385500 chr5D 87.500 1296 138 11 866 2149 459931365 459930082 0.000000e+00 1474.0
19 TraesCS5B01G385500 chr5D 86.364 1298 152 10 970 2259 459959160 459957880 0.000000e+00 1393.0
20 TraesCS5B01G385500 chr5D 88.517 209 15 4 2281 2488 459930043 459929843 8.770000e-61 244.0
21 TraesCS5B01G385500 chr5D 91.018 167 15 0 1821 1987 459991334 459991168 3.180000e-55 226.0
22 TraesCS5B01G385500 chr5D 86.508 126 17 0 1141 1266 460065192 460065067 4.260000e-29 139.0
23 TraesCS5B01G385500 chr5D 83.333 96 14 2 2806 2899 219300051 219299956 1.560000e-13 87.9
24 TraesCS5B01G385500 chr3B 90.351 342 20 8 1 337 39924401 39924734 1.350000e-118 436.0
25 TraesCS5B01G385500 chr3B 90.780 282 18 2 58 337 42305803 42305528 1.390000e-98 370.0
26 TraesCS5B01G385500 chr3B 90.071 282 20 2 58 337 763253832 763254107 3.000000e-95 359.0
27 TraesCS5B01G385500 chr3B 90.106 283 19 4 58 337 781367581 781367305 3.000000e-95 359.0
28 TraesCS5B01G385500 chr3B 96.703 91 3 0 1 91 781367686 781367596 5.470000e-33 152.0
29 TraesCS5B01G385500 chr3B 95.604 91 4 0 1 91 795343035 795342945 2.540000e-31 147.0
30 TraesCS5B01G385500 chr7B 91.489 282 16 4 58 337 79381617 79381342 6.410000e-102 381.0
31 TraesCS5B01G385500 chr7B 91.000 100 9 0 1 100 79381722 79381623 5.510000e-28 135.0
32 TraesCS5B01G385500 chr6B 91.489 282 16 2 58 337 262271175 262271450 6.410000e-102 381.0
33 TraesCS5B01G385500 chr6B 96.703 91 3 0 1 91 262271022 262271112 5.470000e-33 152.0
34 TraesCS5B01G385500 chr1B 91.135 282 23 1 58 337 527379900 527380181 6.410000e-102 381.0
35 TraesCS5B01G385500 chr1B 94.949 99 5 0 1 99 527379813 527379911 4.230000e-34 156.0
36 TraesCS5B01G385500 chr6D 96.703 91 3 0 1 91 436097666 436097756 5.470000e-33 152.0
37 TraesCS5B01G385500 chr6D 85.393 89 8 5 2806 2891 145278190 145278104 1.560000e-13 87.9
38 TraesCS5B01G385500 chr6D 83.505 97 11 5 2806 2899 377642985 377642891 5.630000e-13 86.1
39 TraesCS5B01G385500 chr6D 84.270 89 10 4 2813 2899 283850992 283850906 2.020000e-12 84.2
40 TraesCS5B01G385500 chr4B 92.000 100 8 0 1 100 365618878 365618779 1.180000e-29 141.0
41 TraesCS5B01G385500 chr7D 84.536 97 10 5 2806 2899 274468218 274468124 1.210000e-14 91.6
42 TraesCS5B01G385500 chr1D 84.783 92 10 4 2810 2899 47526563 47526652 4.350000e-14 89.8
43 TraesCS5B01G385500 chr3D 83.871 93 10 5 2810 2899 41968575 41968665 2.020000e-12 84.2
44 TraesCS5B01G385500 chr2D 81.443 97 12 5 2806 2899 299052647 299052740 1.220000e-09 75.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G385500 chr5B 565097449 565100614 3165 True 2465.0 4307 100.0000 1 3166 2 chr5B.!!$R8 3165
1 TraesCS5B01G385500 chr5B 565152466 565154445 1979 True 1107.5 1980 89.6350 923 2762 2 chr5B.!!$R9 1839
2 TraesCS5B01G385500 chr5B 565686151 565687281 1130 True 887.0 887 80.9570 1070 2212 1 chr5B.!!$R5 1142
3 TraesCS5B01G385500 chr5B 565545400 565546631 1231 True 815.0 815 79.0640 1101 2335 1 chr5B.!!$R4 1234
4 TraesCS5B01G385500 chr5B 565492031 565493152 1121 True 804.0 804 79.7350 1068 2190 1 chr5B.!!$R3 1122
5 TraesCS5B01G385500 chr5B 565425232 565426224 992 True 699.0 699 79.5300 1119 2135 1 chr5B.!!$R2 1016
6 TraesCS5B01G385500 chr5B 565360210 565360868 658 True 392.0 392 77.6610 1103 1761 1 chr5B.!!$R1 658
7 TraesCS5B01G385500 chr5A 579399690 579401280 1590 False 2089.0 2089 90.5170 856 2451 1 chr5A.!!$F2 1595
8 TraesCS5B01G385500 chr5A 580200196 580201313 1117 True 689.0 689 77.9840 1069 2190 1 chr5A.!!$R1 1121
9 TraesCS5B01G385500 chr5A 579242584 579243458 874 False 603.0 603 79.5280 1013 1881 1 chr5A.!!$F1 868
10 TraesCS5B01G385500 chr5D 459957880 459959160 1280 True 1393.0 1393 86.3640 970 2259 1 chr5D.!!$R2 1289
11 TraesCS5B01G385500 chr5D 459929843 459931365 1522 True 859.0 1474 88.0085 866 2488 2 chr5D.!!$R5 1622

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
288 289 0.179145 ATCACGTACTTCTTCGGCGG 60.179 55.0 7.21 0.0 0.0 6.13 F
1027 1049 0.609131 CAAAACCCTCGCCCTCACAT 60.609 55.0 0.00 0.0 0.0 3.21 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1123 1151 0.596083 CGCTAGCGACAATGGAGGAG 60.596 60.0 32.98 0.0 42.83 3.69 R
2917 3157 0.033642 GCCTATCTTCTGTACGGGCC 59.966 60.0 0.85 0.0 32.86 5.80 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 3.793144 CCGACGCTTTGCTGGCTC 61.793 66.667 0.00 0.00 0.00 4.70
22 23 3.793144 CGACGCTTTGCTGGCTCC 61.793 66.667 0.00 0.00 0.00 4.70
23 24 2.669569 GACGCTTTGCTGGCTCCA 60.670 61.111 0.00 0.00 0.00 3.86
24 25 2.670934 ACGCTTTGCTGGCTCCAG 60.671 61.111 11.47 11.47 46.15 3.86
25 26 3.437795 CGCTTTGCTGGCTCCAGG 61.438 66.667 16.89 2.28 43.77 4.45
26 27 3.066814 GCTTTGCTGGCTCCAGGG 61.067 66.667 16.89 0.00 43.77 4.45
27 28 3.066814 CTTTGCTGGCTCCAGGGC 61.067 66.667 16.89 5.71 43.77 5.19
51 52 2.203351 GGATGCCCGGGTGGATTC 60.203 66.667 24.63 11.66 37.49 2.52
52 53 2.595095 GATGCCCGGGTGGATTCA 59.405 61.111 24.63 10.90 37.49 2.57
53 54 1.151450 GATGCCCGGGTGGATTCAT 59.849 57.895 24.63 15.77 37.49 2.57
54 55 0.890996 GATGCCCGGGTGGATTCATC 60.891 60.000 24.63 20.27 37.49 2.92
55 56 1.644437 ATGCCCGGGTGGATTCATCA 61.644 55.000 24.63 8.38 37.49 3.07
56 57 1.151450 GCCCGGGTGGATTCATCAT 59.849 57.895 24.63 0.00 37.49 2.45
57 58 0.890996 GCCCGGGTGGATTCATCATC 60.891 60.000 24.63 0.00 37.49 2.92
58 59 0.603707 CCCGGGTGGATTCATCATCG 60.604 60.000 14.18 0.00 37.49 3.84
59 60 1.230635 CCGGGTGGATTCATCATCGC 61.231 60.000 0.00 0.00 37.49 4.58
60 61 1.230635 CGGGTGGATTCATCATCGCC 61.231 60.000 0.00 0.00 31.73 5.54
61 62 1.230635 GGGTGGATTCATCATCGCCG 61.231 60.000 0.00 0.00 31.60 6.46
62 63 1.571460 GTGGATTCATCATCGCCGC 59.429 57.895 0.00 0.00 31.73 6.53
63 64 1.955663 TGGATTCATCATCGCCGCG 60.956 57.895 6.39 6.39 31.73 6.46
64 65 2.171940 GATTCATCATCGCCGCGC 59.828 61.111 8.21 0.00 0.00 6.86
107 108 4.809496 CATGCGCTCCCTGGCCTT 62.809 66.667 9.73 0.00 0.00 4.35
108 109 4.496336 ATGCGCTCCCTGGCCTTC 62.496 66.667 9.73 0.00 0.00 3.46
110 111 4.416738 GCGCTCCCTGGCCTTCTT 62.417 66.667 3.32 0.00 0.00 2.52
111 112 2.437359 CGCTCCCTGGCCTTCTTG 60.437 66.667 3.32 0.00 0.00 3.02
112 113 2.044551 GCTCCCTGGCCTTCTTGG 60.045 66.667 3.32 0.00 39.35 3.61
121 122 3.369921 CCTTCTTGGCCCTGTTGC 58.630 61.111 0.00 0.00 0.00 4.17
122 123 2.629656 CCTTCTTGGCCCTGTTGCG 61.630 63.158 0.00 0.00 0.00 4.85
123 124 3.273080 CTTCTTGGCCCTGTTGCGC 62.273 63.158 0.00 0.00 0.00 6.09
131 132 4.988598 CCTGTTGCGCCTGTCGGT 62.989 66.667 4.18 0.00 38.94 4.69
132 133 3.716006 CTGTTGCGCCTGTCGGTG 61.716 66.667 4.18 0.00 43.83 4.94
141 142 3.991051 CTGTCGGTGGTGACGGCT 61.991 66.667 0.00 0.00 41.87 5.52
142 143 3.515316 CTGTCGGTGGTGACGGCTT 62.515 63.158 0.00 0.00 41.87 4.35
143 144 2.737376 GTCGGTGGTGACGGCTTC 60.737 66.667 0.00 0.00 32.37 3.86
144 145 3.998672 TCGGTGGTGACGGCTTCC 61.999 66.667 0.00 0.00 0.00 3.46
157 158 4.473520 CTTCCCGGCGCTCCACAT 62.474 66.667 7.64 0.00 0.00 3.21
158 159 4.467084 TTCCCGGCGCTCCACATC 62.467 66.667 7.64 0.00 0.00 3.06
165 166 2.892425 CGCTCCACATCCGCCTTC 60.892 66.667 0.00 0.00 0.00 3.46
166 167 2.514824 GCTCCACATCCGCCTTCC 60.515 66.667 0.00 0.00 0.00 3.46
167 168 2.989639 CTCCACATCCGCCTTCCA 59.010 61.111 0.00 0.00 0.00 3.53
168 169 1.450312 CTCCACATCCGCCTTCCAC 60.450 63.158 0.00 0.00 0.00 4.02
169 170 1.903877 CTCCACATCCGCCTTCCACT 61.904 60.000 0.00 0.00 0.00 4.00
170 171 1.450312 CCACATCCGCCTTCCACTC 60.450 63.158 0.00 0.00 0.00 3.51
171 172 1.811266 CACATCCGCCTTCCACTCG 60.811 63.158 0.00 0.00 0.00 4.18
172 173 2.202932 CATCCGCCTTCCACTCGG 60.203 66.667 0.00 0.00 44.16 4.63
173 174 4.162690 ATCCGCCTTCCACTCGGC 62.163 66.667 0.00 0.00 42.65 5.54
177 178 3.423154 GCCTTCCACTCGGCGTTG 61.423 66.667 6.85 5.48 36.45 4.10
178 179 2.742372 CCTTCCACTCGGCGTTGG 60.742 66.667 19.86 19.86 0.00 3.77
179 180 2.342279 CTTCCACTCGGCGTTGGA 59.658 61.111 23.09 23.09 0.00 3.53
180 181 2.027625 CTTCCACTCGGCGTTGGAC 61.028 63.158 25.54 0.00 0.00 4.02
181 182 2.709125 CTTCCACTCGGCGTTGGACA 62.709 60.000 25.54 17.55 0.00 4.02
182 183 2.047274 CCACTCGGCGTTGGACAT 60.047 61.111 20.88 0.00 0.00 3.06
183 184 2.390599 CCACTCGGCGTTGGACATG 61.391 63.158 20.88 0.00 0.00 3.21
184 185 2.742372 ACTCGGCGTTGGACATGC 60.742 61.111 6.85 0.00 36.56 4.06
185 186 2.434884 CTCGGCGTTGGACATGCT 60.435 61.111 6.85 0.00 37.58 3.79
186 187 2.741985 TCGGCGTTGGACATGCTG 60.742 61.111 6.85 0.88 44.41 4.41
187 188 3.803082 CGGCGTTGGACATGCTGG 61.803 66.667 0.00 0.00 39.85 4.85
188 189 3.443045 GGCGTTGGACATGCTGGG 61.443 66.667 0.00 0.00 37.58 4.45
189 190 3.443045 GCGTTGGACATGCTGGGG 61.443 66.667 0.00 0.00 34.13 4.96
190 191 2.751436 CGTTGGACATGCTGGGGG 60.751 66.667 0.00 0.00 0.00 5.40
219 220 3.071580 CGGAGCTAGGCTTCCTTTG 57.928 57.895 0.00 0.00 39.88 2.77
220 221 1.092345 CGGAGCTAGGCTTCCTTTGC 61.092 60.000 0.00 0.00 39.88 3.68
221 222 0.254462 GGAGCTAGGCTTCCTTTGCT 59.746 55.000 11.06 11.06 41.95 3.91
222 223 1.340502 GGAGCTAGGCTTCCTTTGCTT 60.341 52.381 12.05 0.00 40.37 3.91
223 224 2.441410 GAGCTAGGCTTCCTTTGCTTT 58.559 47.619 12.05 0.00 40.37 3.51
224 225 2.163211 GAGCTAGGCTTCCTTTGCTTTG 59.837 50.000 12.05 0.00 40.37 2.77
225 226 1.203287 GCTAGGCTTCCTTTGCTTTGG 59.797 52.381 0.00 0.00 34.61 3.28
226 227 1.203287 CTAGGCTTCCTTTGCTTTGGC 59.797 52.381 0.00 0.00 34.61 4.52
227 228 0.470645 AGGCTTCCTTTGCTTTGGCT 60.471 50.000 0.00 0.00 39.59 4.75
228 229 0.394192 GGCTTCCTTTGCTTTGGCTT 59.606 50.000 0.00 0.00 39.59 4.35
229 230 1.606480 GGCTTCCTTTGCTTTGGCTTC 60.606 52.381 0.00 0.00 39.59 3.86
230 231 1.932156 GCTTCCTTTGCTTTGGCTTCG 60.932 52.381 0.00 0.00 39.59 3.79
231 232 0.673437 TTCCTTTGCTTTGGCTTCGG 59.327 50.000 0.00 0.00 39.59 4.30
232 233 1.373371 CCTTTGCTTTGGCTTCGGC 60.373 57.895 0.00 0.00 39.59 5.54
233 234 1.730547 CTTTGCTTTGGCTTCGGCG 60.731 57.895 0.00 0.00 42.91 6.46
234 235 3.206211 TTTGCTTTGGCTTCGGCGG 62.206 57.895 7.21 0.00 42.91 6.13
279 280 3.186047 GCGCGGCATCACGTACTT 61.186 61.111 8.83 0.00 35.98 2.24
280 281 2.995482 CGCGGCATCACGTACTTC 59.005 61.111 0.00 0.00 35.98 3.01
281 282 1.516386 CGCGGCATCACGTACTTCT 60.516 57.895 0.00 0.00 35.98 2.85
282 283 1.076533 CGCGGCATCACGTACTTCTT 61.077 55.000 0.00 0.00 35.98 2.52
283 284 0.645868 GCGGCATCACGTACTTCTTC 59.354 55.000 0.00 0.00 35.98 2.87
284 285 0.914551 CGGCATCACGTACTTCTTCG 59.085 55.000 0.00 0.00 0.00 3.79
285 286 1.278238 GGCATCACGTACTTCTTCGG 58.722 55.000 0.00 0.00 0.00 4.30
286 287 0.645868 GCATCACGTACTTCTTCGGC 59.354 55.000 0.00 0.00 0.00 5.54
287 288 0.914551 CATCACGTACTTCTTCGGCG 59.085 55.000 0.00 0.00 0.00 6.46
288 289 0.179145 ATCACGTACTTCTTCGGCGG 60.179 55.000 7.21 0.00 0.00 6.13
289 290 2.126189 ACGTACTTCTTCGGCGGC 60.126 61.111 7.21 0.00 0.00 6.53
290 291 2.126228 CGTACTTCTTCGGCGGCA 60.126 61.111 10.53 0.00 0.00 5.69
291 292 1.518572 CGTACTTCTTCGGCGGCAT 60.519 57.895 10.53 0.00 0.00 4.40
292 293 1.752501 CGTACTTCTTCGGCGGCATG 61.753 60.000 10.53 0.00 0.00 4.06
293 294 1.153449 TACTTCTTCGGCGGCATGG 60.153 57.895 10.53 0.00 0.00 3.66
294 295 3.880846 CTTCTTCGGCGGCATGGC 61.881 66.667 9.69 9.69 40.44 4.40
316 317 4.410400 GGAACGGCAGGGGTGGAG 62.410 72.222 0.00 0.00 0.00 3.86
317 318 4.410400 GAACGGCAGGGGTGGAGG 62.410 72.222 0.00 0.00 0.00 4.30
324 325 4.617595 AGGGGTGGAGGCAGGGTT 62.618 66.667 0.00 0.00 0.00 4.11
325 326 3.590574 GGGGTGGAGGCAGGGTTT 61.591 66.667 0.00 0.00 0.00 3.27
326 327 2.283173 GGGTGGAGGCAGGGTTTG 60.283 66.667 0.00 0.00 0.00 2.93
327 328 2.283173 GGTGGAGGCAGGGTTTGG 60.283 66.667 0.00 0.00 0.00 3.28
335 336 3.646715 CAGGGTTTGGCGGGAGGA 61.647 66.667 0.00 0.00 0.00 3.71
336 337 2.856988 AGGGTTTGGCGGGAGGAA 60.857 61.111 0.00 0.00 0.00 3.36
859 860 2.342650 GCGGCTGCATTGGGAAGAA 61.343 57.895 14.08 0.00 42.15 2.52
860 861 1.508088 CGGCTGCATTGGGAAGAAC 59.492 57.895 0.50 0.00 0.00 3.01
882 883 5.663456 ACTTGGTTACTTTACGACAAGTGA 58.337 37.500 12.42 3.76 44.61 3.41
883 884 6.108015 ACTTGGTTACTTTACGACAAGTGAA 58.892 36.000 12.42 3.29 44.61 3.18
892 893 7.536855 ACTTTACGACAAGTGAAGGAGTATAG 58.463 38.462 7.51 0.00 46.88 1.31
904 905 2.829720 AGGAGTATAGCACGTGTTTCCA 59.170 45.455 18.38 0.00 0.00 3.53
915 916 3.020984 ACGTGTTTCCATGTCCAAAACT 58.979 40.909 0.00 0.00 35.97 2.66
921 922 7.863375 CGTGTTTCCATGTCCAAAACTATTTTA 59.137 33.333 9.94 0.00 34.69 1.52
937 946 7.733402 ACTATTTTACTTTTCTGGCACGTAA 57.267 32.000 0.00 0.00 0.00 3.18
952 965 1.701545 CGTAAATGCATGGGCGTCGT 61.702 55.000 0.00 0.00 45.35 4.34
1007 1029 4.716287 CCATCCAAAACCCTGGTCATAAAT 59.284 41.667 0.00 0.00 37.74 1.40
1027 1049 0.609131 CAAAACCCTCGCCCTCACAT 60.609 55.000 0.00 0.00 0.00 3.21
1063 1085 2.396747 TACCGAATCGATCACGCCGG 62.397 60.000 3.36 16.13 44.69 6.13
1132 1160 2.990479 GTGTCCGCCTCCTCCATT 59.010 61.111 0.00 0.00 0.00 3.16
1480 1533 7.060421 GGGGATATGGTAAGTTCATCAAAAGA 58.940 38.462 0.00 0.00 0.00 2.52
1664 1717 3.064958 CGCTGATGTCGAGTTCCTAGTTA 59.935 47.826 0.00 0.00 0.00 2.24
1778 1831 5.450688 GCCACCAAAAATGCCATACGTATAA 60.451 40.000 7.96 0.00 0.00 0.98
1852 1919 0.304705 CGTTGCCGGATATGAAGCAC 59.695 55.000 5.05 0.00 34.37 4.40
1925 1992 3.907260 TTGGCGAGGCTGAAGCTGG 62.907 63.158 0.00 0.00 41.70 4.85
2155 2222 4.070581 CAAGGTTGTAGCTTGTTGATCG 57.929 45.455 9.76 0.00 45.69 3.69
2156 2223 3.678056 AGGTTGTAGCTTGTTGATCGA 57.322 42.857 0.00 0.00 0.00 3.59
2164 2231 1.471676 GCTTGTTGATCGACTCGGGAT 60.472 52.381 14.27 0.00 0.00 3.85
2236 2303 2.937469 TGGCAGGTGCAATTTTATCG 57.063 45.000 4.01 0.00 44.36 2.92
2247 2314 7.120579 AGGTGCAATTTTATCGAGAATGTTACA 59.879 33.333 0.00 0.00 0.00 2.41
2248 2315 7.915397 GGTGCAATTTTATCGAGAATGTTACAT 59.085 33.333 0.00 0.00 0.00 2.29
2272 2351 3.829601 GGACTCTGGAATCTGGATACGAT 59.170 47.826 0.00 0.00 42.51 3.73
2273 2352 4.082463 GGACTCTGGAATCTGGATACGATC 60.082 50.000 0.00 0.00 42.51 3.69
2275 2354 5.882040 ACTCTGGAATCTGGATACGATCTA 58.118 41.667 0.00 0.00 42.51 1.98
2277 2356 6.951198 ACTCTGGAATCTGGATACGATCTAAT 59.049 38.462 0.00 0.00 42.51 1.73
2454 2545 5.284582 AGATGGAGGTTTAGTTCAGGAGAT 58.715 41.667 0.00 0.00 0.00 2.75
2455 2546 6.444704 AGATGGAGGTTTAGTTCAGGAGATA 58.555 40.000 0.00 0.00 0.00 1.98
2456 2547 7.079048 AGATGGAGGTTTAGTTCAGGAGATAT 58.921 38.462 0.00 0.00 0.00 1.63
2485 2576 5.417580 AGTCTTTTCAGCTAGTACCTCTCTG 59.582 44.000 0.00 0.00 0.00 3.35
2513 2604 4.455533 TCTTCATTGCTTCGTACAATTGCT 59.544 37.500 5.05 0.00 35.58 3.91
2546 2654 2.486472 CCTGACTTCTGTTCAGGCAT 57.514 50.000 5.48 0.00 43.58 4.40
2548 2656 1.998315 CTGACTTCTGTTCAGGCATCG 59.002 52.381 0.00 0.00 0.00 3.84
2552 2660 1.998315 CTTCTGTTCAGGCATCGTCTG 59.002 52.381 0.00 0.00 36.50 3.51
2575 2683 4.640771 TCACTCTTTAGCAGGTTTGGAT 57.359 40.909 0.00 0.00 0.00 3.41
2583 2691 7.500992 TCTTTAGCAGGTTTGGATAGACTATG 58.499 38.462 0.00 0.00 0.00 2.23
2626 2866 5.269505 TGTGGTTTTGGGAATTACTGTTG 57.730 39.130 0.00 0.00 0.00 3.33
2635 2875 3.572255 GGGAATTACTGTTGTTGGCTTCA 59.428 43.478 0.00 0.00 0.00 3.02
2636 2876 4.220602 GGGAATTACTGTTGTTGGCTTCAT 59.779 41.667 0.00 0.00 0.00 2.57
2645 2885 7.056635 ACTGTTGTTGGCTTCATATATAGCTT 58.943 34.615 7.30 0.00 37.54 3.74
2648 2888 7.173218 TGTTGTTGGCTTCATATATAGCTTAGC 59.827 37.037 7.30 0.00 37.54 3.09
2671 2911 7.433680 AGCTCAAGTTTTTACCCAAATGTTAG 58.566 34.615 0.00 0.00 0.00 2.34
2691 2931 8.338072 TGTTAGTAAACAAGGTTTCTGTTTGA 57.662 30.769 10.40 0.00 42.60 2.69
2741 2981 9.736414 ATATCTGAATCACAAATTAGGATCCAG 57.264 33.333 15.82 0.00 0.00 3.86
2753 2993 8.742777 CAAATTAGGATCCAGAATTGAACTGAA 58.257 33.333 19.82 0.00 37.54 3.02
2754 2994 8.517062 AATTAGGATCCAGAATTGAACTGAAG 57.483 34.615 15.82 0.00 37.54 3.02
2788 3028 9.582223 GTCTTTTGTTTAGTCTAGAATTGAACG 57.418 33.333 0.00 0.00 0.00 3.95
2789 3029 8.770828 TCTTTTGTTTAGTCTAGAATTGAACGG 58.229 33.333 0.00 0.00 0.00 4.44
2790 3030 7.429636 TTTGTTTAGTCTAGAATTGAACGGG 57.570 36.000 0.00 0.00 0.00 5.28
2791 3031 6.349243 TGTTTAGTCTAGAATTGAACGGGA 57.651 37.500 0.00 0.00 0.00 5.14
2792 3032 6.395629 TGTTTAGTCTAGAATTGAACGGGAG 58.604 40.000 0.00 0.00 0.00 4.30
2794 3034 7.177216 TGTTTAGTCTAGAATTGAACGGGAGTA 59.823 37.037 0.00 0.00 46.69 2.59
2795 3035 7.707624 TTAGTCTAGAATTGAACGGGAGTAA 57.292 36.000 0.00 0.00 46.69 2.24
2796 3036 5.963594 AGTCTAGAATTGAACGGGAGTAAC 58.036 41.667 0.00 0.00 46.69 2.50
2797 3037 4.797349 GTCTAGAATTGAACGGGAGTAACG 59.203 45.833 0.00 0.00 46.69 3.18
2798 3038 2.344025 AGAATTGAACGGGAGTAACGC 58.656 47.619 0.00 0.00 46.69 4.84
2805 3045 2.652530 GGGAGTAACGCGACCACA 59.347 61.111 15.93 0.00 0.00 4.17
2806 3046 1.005867 GGGAGTAACGCGACCACAA 60.006 57.895 15.93 0.00 0.00 3.33
2807 3047 0.600782 GGGAGTAACGCGACCACAAA 60.601 55.000 15.93 0.00 0.00 2.83
2808 3048 0.788391 GGAGTAACGCGACCACAAAG 59.212 55.000 15.93 0.00 0.00 2.77
2809 3049 1.494824 GAGTAACGCGACCACAAAGT 58.505 50.000 15.93 0.00 0.00 2.66
2810 3050 1.862827 GAGTAACGCGACCACAAAGTT 59.137 47.619 15.93 0.00 0.00 2.66
2811 3051 1.862827 AGTAACGCGACCACAAAGTTC 59.137 47.619 15.93 0.00 0.00 3.01
2812 3052 1.862827 GTAACGCGACCACAAAGTTCT 59.137 47.619 15.93 0.00 0.00 3.01
2813 3053 1.375551 AACGCGACCACAAAGTTCTT 58.624 45.000 15.93 0.00 0.00 2.52
2814 3054 2.228138 ACGCGACCACAAAGTTCTTA 57.772 45.000 15.93 0.00 0.00 2.10
2815 3055 2.762745 ACGCGACCACAAAGTTCTTAT 58.237 42.857 15.93 0.00 0.00 1.73
2816 3056 2.478894 ACGCGACCACAAAGTTCTTATG 59.521 45.455 15.93 0.00 0.00 1.90
2817 3057 2.478894 CGCGACCACAAAGTTCTTATGT 59.521 45.455 0.00 0.00 0.00 2.29
2818 3058 3.676172 CGCGACCACAAAGTTCTTATGTA 59.324 43.478 0.00 0.00 0.00 2.29
2819 3059 4.433805 CGCGACCACAAAGTTCTTATGTAC 60.434 45.833 0.00 0.00 0.00 2.90
2820 3060 4.689345 GCGACCACAAAGTTCTTATGTACT 59.311 41.667 0.00 0.00 0.00 2.73
2821 3061 5.163982 GCGACCACAAAGTTCTTATGTACTC 60.164 44.000 0.00 0.00 0.00 2.59
2822 3062 5.347907 CGACCACAAAGTTCTTATGTACTCC 59.652 44.000 0.00 0.00 0.00 3.85
2823 3063 5.557866 ACCACAAAGTTCTTATGTACTCCC 58.442 41.667 0.00 0.00 0.00 4.30
2824 3064 5.309806 ACCACAAAGTTCTTATGTACTCCCT 59.690 40.000 0.00 0.00 0.00 4.20
2825 3065 5.875359 CCACAAAGTTCTTATGTACTCCCTC 59.125 44.000 0.00 0.00 0.00 4.30
2826 3066 5.875359 CACAAAGTTCTTATGTACTCCCTCC 59.125 44.000 0.00 0.00 0.00 4.30
2827 3067 5.546499 ACAAAGTTCTTATGTACTCCCTCCA 59.454 40.000 0.00 0.00 0.00 3.86
2828 3068 6.215636 ACAAAGTTCTTATGTACTCCCTCCAT 59.784 38.462 0.00 0.00 0.00 3.41
2829 3069 6.487299 AAGTTCTTATGTACTCCCTCCATC 57.513 41.667 0.00 0.00 0.00 3.51
2830 3070 4.902448 AGTTCTTATGTACTCCCTCCATCC 59.098 45.833 0.00 0.00 0.00 3.51
2831 3071 3.858135 TCTTATGTACTCCCTCCATCCC 58.142 50.000 0.00 0.00 0.00 3.85
2832 3072 3.208922 TCTTATGTACTCCCTCCATCCCA 59.791 47.826 0.00 0.00 0.00 4.37
2833 3073 2.823460 ATGTACTCCCTCCATCCCAT 57.177 50.000 0.00 0.00 0.00 4.00
2834 3074 3.943269 ATGTACTCCCTCCATCCCATA 57.057 47.619 0.00 0.00 0.00 2.74
2835 3075 3.717507 TGTACTCCCTCCATCCCATAA 57.282 47.619 0.00 0.00 0.00 1.90
2836 3076 4.228237 TGTACTCCCTCCATCCCATAAT 57.772 45.455 0.00 0.00 0.00 1.28
2837 3077 5.363124 TGTACTCCCTCCATCCCATAATA 57.637 43.478 0.00 0.00 0.00 0.98
2838 3078 5.927465 TGTACTCCCTCCATCCCATAATAT 58.073 41.667 0.00 0.00 0.00 1.28
2839 3079 7.063801 TGTACTCCCTCCATCCCATAATATA 57.936 40.000 0.00 0.00 0.00 0.86
2840 3080 7.492552 TGTACTCCCTCCATCCCATAATATAA 58.507 38.462 0.00 0.00 0.00 0.98
2841 3081 7.964867 TGTACTCCCTCCATCCCATAATATAAA 59.035 37.037 0.00 0.00 0.00 1.40
2842 3082 9.004231 GTACTCCCTCCATCCCATAATATAAAT 57.996 37.037 0.00 0.00 0.00 1.40
2843 3083 7.876371 ACTCCCTCCATCCCATAATATAAATG 58.124 38.462 0.00 0.00 0.00 2.32
2844 3084 7.465563 ACTCCCTCCATCCCATAATATAAATGT 59.534 37.037 0.00 0.00 0.00 2.71
2845 3085 8.941639 TCCCTCCATCCCATAATATAAATGTA 57.058 34.615 0.00 0.00 0.00 2.29
2846 3086 9.533068 TCCCTCCATCCCATAATATAAATGTAT 57.467 33.333 0.00 0.00 0.00 2.29
2862 3102 6.385649 AAATGTATTTTCGACACCAGTGTT 57.614 33.333 4.68 0.00 45.05 3.32
2863 3103 5.607119 ATGTATTTTCGACACCAGTGTTC 57.393 39.130 4.68 0.00 45.05 3.18
2864 3104 4.699637 TGTATTTTCGACACCAGTGTTCT 58.300 39.130 4.68 0.00 45.05 3.01
2865 3105 4.509970 TGTATTTTCGACACCAGTGTTCTG 59.490 41.667 4.68 0.00 45.05 3.02
2866 3106 2.684001 TTTCGACACCAGTGTTCTGT 57.316 45.000 4.68 0.00 45.05 3.41
2867 3107 3.804786 TTTCGACACCAGTGTTCTGTA 57.195 42.857 4.68 0.00 45.05 2.74
2868 3108 3.804786 TTCGACACCAGTGTTCTGTAA 57.195 42.857 4.68 0.00 45.05 2.41
2869 3109 3.804786 TCGACACCAGTGTTCTGTAAA 57.195 42.857 4.68 0.00 45.05 2.01
2870 3110 4.126208 TCGACACCAGTGTTCTGTAAAA 57.874 40.909 4.68 0.00 45.05 1.52
2871 3111 4.699637 TCGACACCAGTGTTCTGTAAAAT 58.300 39.130 4.68 0.00 45.05 1.82
2872 3112 5.845103 TCGACACCAGTGTTCTGTAAAATA 58.155 37.500 4.68 0.00 45.05 1.40
2873 3113 6.460781 TCGACACCAGTGTTCTGTAAAATAT 58.539 36.000 4.68 0.00 45.05 1.28
2874 3114 6.367695 TCGACACCAGTGTTCTGTAAAATATG 59.632 38.462 4.68 0.00 45.05 1.78
2875 3115 6.254281 ACACCAGTGTTCTGTAAAATATGC 57.746 37.500 0.00 0.00 41.83 3.14
2876 3116 6.003950 ACACCAGTGTTCTGTAAAATATGCT 58.996 36.000 0.00 0.00 41.83 3.79
2877 3117 6.149474 ACACCAGTGTTCTGTAAAATATGCTC 59.851 38.462 0.00 0.00 41.83 4.26
2878 3118 6.372659 CACCAGTGTTCTGTAAAATATGCTCT 59.627 38.462 0.00 0.00 39.82 4.09
2879 3119 6.942576 ACCAGTGTTCTGTAAAATATGCTCTT 59.057 34.615 0.00 0.00 39.82 2.85
2880 3120 8.100791 ACCAGTGTTCTGTAAAATATGCTCTTA 58.899 33.333 0.00 0.00 39.82 2.10
2881 3121 9.113838 CCAGTGTTCTGTAAAATATGCTCTTAT 57.886 33.333 0.00 0.00 39.82 1.73
2897 3137 7.921041 TGCTCTTATATTATGGGATAGAGGG 57.079 40.000 0.00 0.00 0.00 4.30
2898 3138 7.662083 TGCTCTTATATTATGGGATAGAGGGA 58.338 38.462 0.00 0.00 0.00 4.20
2899 3139 8.129001 TGCTCTTATATTATGGGATAGAGGGAA 58.871 37.037 0.00 0.00 0.00 3.97
2900 3140 9.165057 GCTCTTATATTATGGGATAGAGGGAAT 57.835 37.037 0.00 0.00 0.00 3.01
2912 3152 9.393786 TGGGATAGAGGGAATTATATATAAGCC 57.606 37.037 10.79 12.92 0.00 4.35
2913 3153 9.393786 GGGATAGAGGGAATTATATATAAGCCA 57.606 37.037 20.38 7.78 0.00 4.75
2918 3158 8.552296 AGAGGGAATTATATATAAGCCACAAGG 58.448 37.037 20.38 0.00 38.23 3.61
2928 3168 3.065306 CCACAAGGCCCGTACAGA 58.935 61.111 0.00 0.00 0.00 3.41
2929 3169 1.373435 CCACAAGGCCCGTACAGAA 59.627 57.895 0.00 0.00 0.00 3.02
2930 3170 0.673644 CCACAAGGCCCGTACAGAAG 60.674 60.000 0.00 0.00 0.00 2.85
2931 3171 0.320374 CACAAGGCCCGTACAGAAGA 59.680 55.000 0.00 0.00 0.00 2.87
2932 3172 1.066143 CACAAGGCCCGTACAGAAGAT 60.066 52.381 0.00 0.00 0.00 2.40
2933 3173 2.167693 CACAAGGCCCGTACAGAAGATA 59.832 50.000 0.00 0.00 0.00 1.98
2934 3174 2.431057 ACAAGGCCCGTACAGAAGATAG 59.569 50.000 0.00 0.00 0.00 2.08
2935 3175 1.705873 AGGCCCGTACAGAAGATAGG 58.294 55.000 0.00 0.00 0.00 2.57
2936 3176 0.033642 GGCCCGTACAGAAGATAGGC 59.966 60.000 0.00 0.00 38.21 3.93
2937 3177 0.033642 GCCCGTACAGAAGATAGGCC 59.966 60.000 0.00 0.00 32.68 5.19
2938 3178 1.410004 CCCGTACAGAAGATAGGCCA 58.590 55.000 5.01 0.00 0.00 5.36
2939 3179 1.068741 CCCGTACAGAAGATAGGCCAC 59.931 57.143 5.01 0.00 0.00 5.01
2940 3180 1.068741 CCGTACAGAAGATAGGCCACC 59.931 57.143 5.01 0.00 0.00 4.61
2941 3181 1.068741 CGTACAGAAGATAGGCCACCC 59.931 57.143 5.01 0.00 0.00 4.61
2942 3182 2.116238 GTACAGAAGATAGGCCACCCA 58.884 52.381 5.01 0.00 0.00 4.51
2943 3183 1.668826 ACAGAAGATAGGCCACCCAA 58.331 50.000 5.01 0.00 0.00 4.12
2944 3184 2.208872 ACAGAAGATAGGCCACCCAAT 58.791 47.619 5.01 0.00 0.00 3.16
2945 3185 3.393687 ACAGAAGATAGGCCACCCAATA 58.606 45.455 5.01 0.00 0.00 1.90
2946 3186 3.785887 ACAGAAGATAGGCCACCCAATAA 59.214 43.478 5.01 0.00 0.00 1.40
2947 3187 4.141390 ACAGAAGATAGGCCACCCAATAAG 60.141 45.833 5.01 0.00 0.00 1.73
2948 3188 4.047883 AGAAGATAGGCCACCCAATAAGT 58.952 43.478 5.01 0.00 0.00 2.24
2949 3189 3.864789 AGATAGGCCACCCAATAAGTG 57.135 47.619 5.01 0.00 34.91 3.16
2950 3190 2.158608 AGATAGGCCACCCAATAAGTGC 60.159 50.000 5.01 0.00 33.75 4.40
2951 3191 0.995803 TAGGCCACCCAATAAGTGCA 59.004 50.000 5.01 0.00 33.75 4.57
2952 3192 0.611896 AGGCCACCCAATAAGTGCAC 60.612 55.000 9.40 9.40 33.75 4.57
2953 3193 0.611896 GGCCACCCAATAAGTGCACT 60.612 55.000 15.25 15.25 33.75 4.40
2954 3194 1.340600 GGCCACCCAATAAGTGCACTA 60.341 52.381 22.01 9.11 33.75 2.74
2955 3195 2.017049 GCCACCCAATAAGTGCACTAG 58.983 52.381 22.01 10.46 33.75 2.57
2956 3196 2.017049 CCACCCAATAAGTGCACTAGC 58.983 52.381 22.01 0.00 42.57 3.42
2957 3197 2.356125 CCACCCAATAAGTGCACTAGCT 60.356 50.000 22.01 7.35 42.74 3.32
2958 3198 2.679837 CACCCAATAAGTGCACTAGCTG 59.320 50.000 22.01 16.27 42.74 4.24
2959 3199 2.571653 ACCCAATAAGTGCACTAGCTGA 59.428 45.455 22.01 3.75 42.74 4.26
2960 3200 3.200825 ACCCAATAAGTGCACTAGCTGAT 59.799 43.478 22.01 5.66 42.74 2.90
2961 3201 3.812053 CCCAATAAGTGCACTAGCTGATC 59.188 47.826 22.01 0.00 42.74 2.92
2962 3202 4.445453 CCAATAAGTGCACTAGCTGATCA 58.555 43.478 22.01 0.00 42.74 2.92
2963 3203 5.061853 CCAATAAGTGCACTAGCTGATCAT 58.938 41.667 22.01 3.16 42.74 2.45
2964 3204 6.226052 CCAATAAGTGCACTAGCTGATCATA 58.774 40.000 22.01 5.64 42.74 2.15
2965 3205 6.877855 CCAATAAGTGCACTAGCTGATCATAT 59.122 38.462 22.01 7.92 42.74 1.78
2966 3206 8.037166 CCAATAAGTGCACTAGCTGATCATATA 58.963 37.037 22.01 4.27 42.74 0.86
2967 3207 9.428097 CAATAAGTGCACTAGCTGATCATATAA 57.572 33.333 22.01 0.00 42.74 0.98
2968 3208 9.650539 AATAAGTGCACTAGCTGATCATATAAG 57.349 33.333 22.01 0.00 42.74 1.73
2969 3209 6.035368 AGTGCACTAGCTGATCATATAAGG 57.965 41.667 20.16 0.00 42.74 2.69
2970 3210 4.629200 GTGCACTAGCTGATCATATAAGGC 59.371 45.833 10.32 0.00 42.74 4.35
2971 3211 4.529769 TGCACTAGCTGATCATATAAGGCT 59.470 41.667 9.51 9.51 42.74 4.58
2972 3212 5.012458 TGCACTAGCTGATCATATAAGGCTT 59.988 40.000 9.81 4.58 42.74 4.35
2973 3213 5.580297 GCACTAGCTGATCATATAAGGCTTC 59.420 44.000 1.30 0.00 37.91 3.86
2974 3214 5.804473 CACTAGCTGATCATATAAGGCTTCG 59.196 44.000 1.30 5.39 0.00 3.79
2975 3215 5.712446 ACTAGCTGATCATATAAGGCTTCGA 59.288 40.000 1.30 0.00 0.00 3.71
2976 3216 5.674052 AGCTGATCATATAAGGCTTCGAT 57.326 39.130 1.30 1.91 0.00 3.59
2977 3217 6.047511 AGCTGATCATATAAGGCTTCGATT 57.952 37.500 1.30 0.00 0.00 3.34
2978 3218 6.471146 AGCTGATCATATAAGGCTTCGATTT 58.529 36.000 1.30 0.00 0.00 2.17
2979 3219 6.370994 AGCTGATCATATAAGGCTTCGATTTG 59.629 38.462 1.30 0.00 0.00 2.32
2980 3220 6.402983 GCTGATCATATAAGGCTTCGATTTGG 60.403 42.308 1.30 0.00 0.00 3.28
2981 3221 5.412594 TGATCATATAAGGCTTCGATTTGGC 59.587 40.000 1.30 0.00 0.00 4.52
2982 3222 4.713553 TCATATAAGGCTTCGATTTGGCA 58.286 39.130 1.30 0.00 0.00 4.92
2983 3223 5.129634 TCATATAAGGCTTCGATTTGGCAA 58.870 37.500 1.30 0.00 0.00 4.52
2984 3224 5.239306 TCATATAAGGCTTCGATTTGGCAAG 59.761 40.000 1.30 0.00 0.00 4.01
2985 3225 1.620822 AAGGCTTCGATTTGGCAAGT 58.379 45.000 0.00 0.00 0.00 3.16
2986 3226 1.168714 AGGCTTCGATTTGGCAAGTC 58.831 50.000 12.28 12.28 0.00 3.01
2987 3227 0.171231 GGCTTCGATTTGGCAAGTCC 59.829 55.000 15.93 3.16 0.00 3.85
2988 3228 0.881118 GCTTCGATTTGGCAAGTCCA 59.119 50.000 15.93 1.47 44.85 4.02
3002 3242 7.894753 TGGCAAGTCCAAATGATATTATTCA 57.105 32.000 0.00 0.00 43.21 2.57
3003 3243 7.715657 TGGCAAGTCCAAATGATATTATTCAC 58.284 34.615 0.00 0.00 43.21 3.18
3004 3244 7.560991 TGGCAAGTCCAAATGATATTATTCACT 59.439 33.333 0.00 0.00 43.21 3.41
3005 3245 9.066892 GGCAAGTCCAAATGATATTATTCACTA 57.933 33.333 0.00 0.00 34.01 2.74
3047 3287 9.914131 GCCTAGTCCATAATGAAAAATTAATCC 57.086 33.333 0.00 0.00 0.00 3.01
3061 3301 9.150348 GAAAAATTAATCCATAAATATGCCCCG 57.850 33.333 0.00 0.00 32.40 5.73
3062 3302 8.429237 AAAATTAATCCATAAATATGCCCCGA 57.571 30.769 0.00 0.00 32.40 5.14
3063 3303 8.429237 AAATTAATCCATAAATATGCCCCGAA 57.571 30.769 0.00 0.00 32.40 4.30
3064 3304 8.429237 AATTAATCCATAAATATGCCCCGAAA 57.571 30.769 0.00 0.00 32.40 3.46
3065 3305 7.841282 TTAATCCATAAATATGCCCCGAAAA 57.159 32.000 0.00 0.00 32.40 2.29
3066 3306 6.739331 AATCCATAAATATGCCCCGAAAAA 57.261 33.333 0.00 0.00 32.40 1.94
3067 3307 5.523438 TCCATAAATATGCCCCGAAAAAC 57.477 39.130 0.00 0.00 32.40 2.43
3068 3308 5.205056 TCCATAAATATGCCCCGAAAAACT 58.795 37.500 0.00 0.00 32.40 2.66
3069 3309 6.366340 TCCATAAATATGCCCCGAAAAACTA 58.634 36.000 0.00 0.00 32.40 2.24
3070 3310 6.834451 TCCATAAATATGCCCCGAAAAACTAA 59.166 34.615 0.00 0.00 32.40 2.24
3071 3311 7.507616 TCCATAAATATGCCCCGAAAAACTAAT 59.492 33.333 0.00 0.00 32.40 1.73
3072 3312 7.812669 CCATAAATATGCCCCGAAAAACTAATC 59.187 37.037 0.00 0.00 32.40 1.75
3073 3313 5.784578 AATATGCCCCGAAAAACTAATCC 57.215 39.130 0.00 0.00 0.00 3.01
3074 3314 2.588464 TGCCCCGAAAAACTAATCCA 57.412 45.000 0.00 0.00 0.00 3.41
3075 3315 3.094484 TGCCCCGAAAAACTAATCCAT 57.906 42.857 0.00 0.00 0.00 3.41
3076 3316 4.237976 TGCCCCGAAAAACTAATCCATA 57.762 40.909 0.00 0.00 0.00 2.74
3077 3317 4.798882 TGCCCCGAAAAACTAATCCATAT 58.201 39.130 0.00 0.00 0.00 1.78
3078 3318 5.942961 TGCCCCGAAAAACTAATCCATATA 58.057 37.500 0.00 0.00 0.00 0.86
3079 3319 6.548321 TGCCCCGAAAAACTAATCCATATAT 58.452 36.000 0.00 0.00 0.00 0.86
3080 3320 7.691213 TGCCCCGAAAAACTAATCCATATATA 58.309 34.615 0.00 0.00 0.00 0.86
3081 3321 8.333235 TGCCCCGAAAAACTAATCCATATATAT 58.667 33.333 0.00 0.00 0.00 0.86
3082 3322 9.841295 GCCCCGAAAAACTAATCCATATATATA 57.159 33.333 0.00 0.00 0.00 0.86
3115 3355 5.505173 CGAAGCATGGAGGAAACAATATT 57.495 39.130 0.00 0.00 0.00 1.28
3116 3356 6.618287 CGAAGCATGGAGGAAACAATATTA 57.382 37.500 0.00 0.00 0.00 0.98
3117 3357 7.026631 CGAAGCATGGAGGAAACAATATTAA 57.973 36.000 0.00 0.00 0.00 1.40
3118 3358 7.651808 CGAAGCATGGAGGAAACAATATTAAT 58.348 34.615 0.00 0.00 0.00 1.40
3119 3359 8.783093 CGAAGCATGGAGGAAACAATATTAATA 58.217 33.333 0.00 0.00 0.00 0.98
3120 3360 9.899226 GAAGCATGGAGGAAACAATATTAATAC 57.101 33.333 0.00 0.00 0.00 1.89
3121 3361 9.646522 AAGCATGGAGGAAACAATATTAATACT 57.353 29.630 0.00 0.00 0.00 2.12
3126 3366 9.555727 TGGAGGAAACAATATTAATACTAGCAC 57.444 33.333 0.00 0.00 0.00 4.40
3127 3367 9.780186 GGAGGAAACAATATTAATACTAGCACT 57.220 33.333 0.00 0.00 0.00 4.40
3142 3382 5.784177 ACTAGCACTAATAATCCATCCACG 58.216 41.667 0.00 0.00 0.00 4.94
3143 3383 4.008074 AGCACTAATAATCCATCCACGG 57.992 45.455 0.00 0.00 0.00 4.94
3144 3384 3.074412 GCACTAATAATCCATCCACGGG 58.926 50.000 0.00 0.00 0.00 5.28
3145 3385 3.244422 GCACTAATAATCCATCCACGGGA 60.244 47.826 0.00 0.00 39.14 5.14
3146 3386 4.745478 GCACTAATAATCCATCCACGGGAA 60.745 45.833 0.00 0.00 38.09 3.97
3147 3387 4.997395 CACTAATAATCCATCCACGGGAAG 59.003 45.833 0.00 0.00 38.09 3.46
3148 3388 2.568623 ATAATCCATCCACGGGAAGC 57.431 50.000 0.00 0.00 38.09 3.86
3149 3389 1.208706 TAATCCATCCACGGGAAGCA 58.791 50.000 0.00 0.00 38.09 3.91
3150 3390 0.107017 AATCCATCCACGGGAAGCAG 60.107 55.000 0.00 0.00 38.09 4.24
3151 3391 1.987807 ATCCATCCACGGGAAGCAGG 61.988 60.000 0.00 0.00 38.09 4.85
3152 3392 2.124570 CATCCACGGGAAGCAGGG 60.125 66.667 0.00 0.00 34.34 4.45
3153 3393 3.411517 ATCCACGGGAAGCAGGGG 61.412 66.667 0.00 0.00 34.34 4.79
3154 3394 3.943137 ATCCACGGGAAGCAGGGGA 62.943 63.158 0.00 0.00 34.34 4.81
3155 3395 4.101448 CCACGGGAAGCAGGGGAG 62.101 72.222 0.00 0.00 0.00 4.30
3156 3396 3.003173 CACGGGAAGCAGGGGAGA 61.003 66.667 0.00 0.00 0.00 3.71
3157 3397 2.685380 ACGGGAAGCAGGGGAGAG 60.685 66.667 0.00 0.00 0.00 3.20
3158 3398 3.474570 CGGGAAGCAGGGGAGAGG 61.475 72.222 0.00 0.00 0.00 3.69
3159 3399 2.285743 GGGAAGCAGGGGAGAGGT 60.286 66.667 0.00 0.00 0.00 3.85
3160 3400 1.003051 GGGAAGCAGGGGAGAGGTA 59.997 63.158 0.00 0.00 0.00 3.08
3161 3401 1.051556 GGGAAGCAGGGGAGAGGTAG 61.052 65.000 0.00 0.00 0.00 3.18
3162 3402 0.325765 GGAAGCAGGGGAGAGGTAGT 60.326 60.000 0.00 0.00 0.00 2.73
3163 3403 0.827368 GAAGCAGGGGAGAGGTAGTG 59.173 60.000 0.00 0.00 0.00 2.74
3164 3404 0.117340 AAGCAGGGGAGAGGTAGTGT 59.883 55.000 0.00 0.00 0.00 3.55
3165 3405 0.616111 AGCAGGGGAGAGGTAGTGTG 60.616 60.000 0.00 0.00 0.00 3.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
4 5 3.793144 GAGCCAGCAAAGCGTCGG 61.793 66.667 0.00 0.00 34.64 4.79
5 6 3.793144 GGAGCCAGCAAAGCGTCG 61.793 66.667 0.00 0.00 34.64 5.12
6 7 2.669569 TGGAGCCAGCAAAGCGTC 60.670 61.111 0.00 0.00 34.64 5.19
7 8 2.670934 CTGGAGCCAGCAAAGCGT 60.671 61.111 3.18 0.00 37.24 5.07
8 9 3.437795 CCTGGAGCCAGCAAAGCG 61.438 66.667 11.07 0.00 42.35 4.68
9 10 3.066814 CCCTGGAGCCAGCAAAGC 61.067 66.667 11.07 0.00 42.35 3.51
10 11 3.066814 GCCCTGGAGCCAGCAAAG 61.067 66.667 11.07 1.10 42.35 2.77
34 35 2.203351 GAATCCACCCGGGCATCC 60.203 66.667 24.08 0.74 36.21 3.51
35 36 0.890996 GATGAATCCACCCGGGCATC 60.891 60.000 24.08 19.89 36.21 3.91
36 37 1.151450 GATGAATCCACCCGGGCAT 59.849 57.895 24.08 15.14 36.21 4.40
37 38 1.644437 ATGATGAATCCACCCGGGCA 61.644 55.000 24.08 9.99 36.21 5.36
38 39 0.890996 GATGATGAATCCACCCGGGC 60.891 60.000 24.08 2.84 36.21 6.13
39 40 0.603707 CGATGATGAATCCACCCGGG 60.604 60.000 22.25 22.25 38.37 5.73
40 41 1.230635 GCGATGATGAATCCACCCGG 61.231 60.000 0.00 0.00 30.80 5.73
41 42 1.230635 GGCGATGATGAATCCACCCG 61.231 60.000 0.00 0.00 30.80 5.28
42 43 1.230635 CGGCGATGATGAATCCACCC 61.231 60.000 0.00 0.00 30.80 4.61
43 44 1.845809 GCGGCGATGATGAATCCACC 61.846 60.000 12.98 0.00 30.80 4.61
44 45 1.571460 GCGGCGATGATGAATCCAC 59.429 57.895 12.98 0.00 30.80 4.02
45 46 1.955663 CGCGGCGATGATGAATCCA 60.956 57.895 19.16 0.00 30.80 3.41
46 47 2.856032 CGCGGCGATGATGAATCC 59.144 61.111 19.16 0.00 30.80 3.01
47 48 2.171940 GCGCGGCGATGATGAATC 59.828 61.111 28.54 0.14 0.00 2.52
90 91 4.809496 AAGGCCAGGGAGCGCATG 62.809 66.667 11.47 2.17 0.00 4.06
91 92 4.496336 GAAGGCCAGGGAGCGCAT 62.496 66.667 11.47 0.00 0.00 4.73
93 94 4.416738 AAGAAGGCCAGGGAGCGC 62.417 66.667 5.01 0.00 0.00 5.92
94 95 2.437359 CAAGAAGGCCAGGGAGCG 60.437 66.667 5.01 0.00 0.00 5.03
95 96 2.044551 CCAAGAAGGCCAGGGAGC 60.045 66.667 5.01 0.00 0.00 4.70
104 105 2.629656 CGCAACAGGGCCAAGAAGG 61.630 63.158 6.18 0.00 41.84 3.46
105 106 2.956987 CGCAACAGGGCCAAGAAG 59.043 61.111 6.18 0.00 0.00 2.85
106 107 3.294493 GCGCAACAGGGCCAAGAA 61.294 61.111 6.18 0.00 35.39 2.52
114 115 4.988598 ACCGACAGGCGCAACAGG 62.989 66.667 10.83 8.23 42.76 4.00
115 116 3.716006 CACCGACAGGCGCAACAG 61.716 66.667 10.83 0.00 42.76 3.16
124 125 3.515316 AAGCCGTCACCACCGACAG 62.515 63.158 0.00 0.00 35.54 3.51
125 126 3.509137 GAAGCCGTCACCACCGACA 62.509 63.158 0.00 0.00 35.54 4.35
126 127 2.737376 GAAGCCGTCACCACCGAC 60.737 66.667 0.00 0.00 0.00 4.79
127 128 3.998672 GGAAGCCGTCACCACCGA 61.999 66.667 0.00 0.00 0.00 4.69
140 141 4.473520 ATGTGGAGCGCCGGGAAG 62.474 66.667 2.29 0.00 36.79 3.46
141 142 4.467084 GATGTGGAGCGCCGGGAA 62.467 66.667 2.29 0.00 36.79 3.97
148 149 2.892425 GAAGGCGGATGTGGAGCG 60.892 66.667 0.00 0.00 0.00 5.03
149 150 2.514824 GGAAGGCGGATGTGGAGC 60.515 66.667 0.00 0.00 0.00 4.70
150 151 1.450312 GTGGAAGGCGGATGTGGAG 60.450 63.158 0.00 0.00 0.00 3.86
151 152 1.899437 GAGTGGAAGGCGGATGTGGA 61.899 60.000 0.00 0.00 0.00 4.02
152 153 1.450312 GAGTGGAAGGCGGATGTGG 60.450 63.158 0.00 0.00 0.00 4.17
153 154 1.811266 CGAGTGGAAGGCGGATGTG 60.811 63.158 0.00 0.00 0.00 3.21
154 155 2.579201 CGAGTGGAAGGCGGATGT 59.421 61.111 0.00 0.00 0.00 3.06
161 162 2.742372 CCAACGCCGAGTGGAAGG 60.742 66.667 5.80 0.00 37.49 3.46
162 163 2.027625 GTCCAACGCCGAGTGGAAG 61.028 63.158 14.22 0.00 37.49 3.46
163 164 2.029964 GTCCAACGCCGAGTGGAA 59.970 61.111 14.22 0.00 37.49 3.53
164 165 2.579657 ATGTCCAACGCCGAGTGGA 61.580 57.895 9.65 9.65 37.49 4.02
165 166 2.047274 ATGTCCAACGCCGAGTGG 60.047 61.111 5.41 5.41 38.77 4.00
166 167 3.027170 GCATGTCCAACGCCGAGTG 62.027 63.158 0.00 0.00 0.00 3.51
167 168 2.742372 GCATGTCCAACGCCGAGT 60.742 61.111 0.00 0.00 0.00 4.18
168 169 2.434884 AGCATGTCCAACGCCGAG 60.435 61.111 0.00 0.00 0.00 4.63
169 170 2.741985 CAGCATGTCCAACGCCGA 60.742 61.111 0.00 0.00 0.00 5.54
170 171 3.803082 CCAGCATGTCCAACGCCG 61.803 66.667 0.00 0.00 0.00 6.46
171 172 3.443045 CCCAGCATGTCCAACGCC 61.443 66.667 0.00 0.00 0.00 5.68
172 173 3.443045 CCCCAGCATGTCCAACGC 61.443 66.667 0.00 0.00 0.00 4.84
173 174 2.751436 CCCCCAGCATGTCCAACG 60.751 66.667 0.00 0.00 0.00 4.10
192 193 1.142748 CCTAGCTCCGCTGTCCAAG 59.857 63.158 0.00 0.00 40.10 3.61
193 194 3.019003 GCCTAGCTCCGCTGTCCAA 62.019 63.158 0.00 0.00 40.10 3.53
194 195 3.461773 GCCTAGCTCCGCTGTCCA 61.462 66.667 0.00 0.00 40.10 4.02
195 196 2.636778 GAAGCCTAGCTCCGCTGTCC 62.637 65.000 8.14 0.00 40.10 4.02
196 197 1.227118 GAAGCCTAGCTCCGCTGTC 60.227 63.158 8.14 5.23 40.10 3.51
197 198 2.726351 GGAAGCCTAGCTCCGCTGT 61.726 63.158 8.14 0.02 40.10 4.40
198 199 1.965754 AAGGAAGCCTAGCTCCGCTG 61.966 60.000 8.14 0.00 40.10 5.18
199 200 1.268283 AAAGGAAGCCTAGCTCCGCT 61.268 55.000 1.66 1.66 38.25 5.52
200 201 1.092345 CAAAGGAAGCCTAGCTCCGC 61.092 60.000 0.00 0.00 38.25 5.54
201 202 1.092345 GCAAAGGAAGCCTAGCTCCG 61.092 60.000 0.00 0.00 38.25 4.63
202 203 0.254462 AGCAAAGGAAGCCTAGCTCC 59.746 55.000 7.32 0.00 39.74 4.70
203 204 2.121291 AAGCAAAGGAAGCCTAGCTC 57.879 50.000 12.00 0.00 41.89 4.09
204 205 2.165998 CAAAGCAAAGGAAGCCTAGCT 58.834 47.619 7.32 7.32 43.65 3.32
205 206 1.203287 CCAAAGCAAAGGAAGCCTAGC 59.797 52.381 0.00 0.00 35.78 3.42
206 207 1.203287 GCCAAAGCAAAGGAAGCCTAG 59.797 52.381 0.00 0.00 39.53 3.02
207 208 1.203050 AGCCAAAGCAAAGGAAGCCTA 60.203 47.619 0.00 0.00 43.56 3.93
208 209 0.470645 AGCCAAAGCAAAGGAAGCCT 60.471 50.000 0.00 0.00 43.56 4.58
209 210 0.394192 AAGCCAAAGCAAAGGAAGCC 59.606 50.000 0.00 0.00 43.56 4.35
210 211 1.788258 GAAGCCAAAGCAAAGGAAGC 58.212 50.000 0.00 0.00 43.56 3.86
211 212 1.336240 CCGAAGCCAAAGCAAAGGAAG 60.336 52.381 0.00 0.00 43.56 3.46
212 213 0.673437 CCGAAGCCAAAGCAAAGGAA 59.327 50.000 0.00 0.00 43.56 3.36
213 214 1.805428 GCCGAAGCCAAAGCAAAGGA 61.805 55.000 0.00 0.00 43.56 3.36
214 215 1.373371 GCCGAAGCCAAAGCAAAGG 60.373 57.895 0.00 0.00 43.56 3.11
215 216 1.730547 CGCCGAAGCCAAAGCAAAG 60.731 57.895 0.00 0.00 43.56 2.77
216 217 2.334653 CGCCGAAGCCAAAGCAAA 59.665 55.556 0.00 0.00 43.56 3.68
217 218 3.669344 CCGCCGAAGCCAAAGCAA 61.669 61.111 0.00 0.00 43.56 3.91
264 265 0.645868 GAAGAAGTACGTGATGCCGC 59.354 55.000 0.00 0.00 0.00 6.53
265 266 0.914551 CGAAGAAGTACGTGATGCCG 59.085 55.000 0.00 0.00 0.00 5.69
266 267 1.278238 CCGAAGAAGTACGTGATGCC 58.722 55.000 0.00 0.00 0.00 4.40
267 268 0.645868 GCCGAAGAAGTACGTGATGC 59.354 55.000 0.00 0.00 0.00 3.91
268 269 0.914551 CGCCGAAGAAGTACGTGATG 59.085 55.000 0.00 0.00 0.00 3.07
269 270 0.179145 CCGCCGAAGAAGTACGTGAT 60.179 55.000 0.00 0.00 0.00 3.06
270 271 1.210931 CCGCCGAAGAAGTACGTGA 59.789 57.895 0.00 0.00 0.00 4.35
271 272 2.442188 GCCGCCGAAGAAGTACGTG 61.442 63.158 0.00 0.00 0.00 4.49
272 273 2.126189 GCCGCCGAAGAAGTACGT 60.126 61.111 0.00 0.00 0.00 3.57
273 274 1.518572 ATGCCGCCGAAGAAGTACG 60.519 57.895 0.00 0.00 0.00 3.67
274 275 1.429148 CCATGCCGCCGAAGAAGTAC 61.429 60.000 0.00 0.00 0.00 2.73
275 276 1.153449 CCATGCCGCCGAAGAAGTA 60.153 57.895 0.00 0.00 0.00 2.24
276 277 2.436646 CCATGCCGCCGAAGAAGT 60.437 61.111 0.00 0.00 0.00 3.01
277 278 3.880846 GCCATGCCGCCGAAGAAG 61.881 66.667 0.00 0.00 0.00 2.85
299 300 4.410400 CTCCACCCCTGCCGTTCC 62.410 72.222 0.00 0.00 0.00 3.62
300 301 4.410400 CCTCCACCCCTGCCGTTC 62.410 72.222 0.00 0.00 0.00 3.95
307 308 4.617595 AACCCTGCCTCCACCCCT 62.618 66.667 0.00 0.00 0.00 4.79
308 309 3.590574 AAACCCTGCCTCCACCCC 61.591 66.667 0.00 0.00 0.00 4.95
309 310 2.283173 CAAACCCTGCCTCCACCC 60.283 66.667 0.00 0.00 0.00 4.61
310 311 2.283173 CCAAACCCTGCCTCCACC 60.283 66.667 0.00 0.00 0.00 4.61
311 312 2.991540 GCCAAACCCTGCCTCCAC 60.992 66.667 0.00 0.00 0.00 4.02
312 313 4.659172 CGCCAAACCCTGCCTCCA 62.659 66.667 0.00 0.00 0.00 3.86
318 319 3.204467 TTCCTCCCGCCAAACCCTG 62.204 63.158 0.00 0.00 0.00 4.45
319 320 2.856988 TTCCTCCCGCCAAACCCT 60.857 61.111 0.00 0.00 0.00 4.34
840 841 4.183686 CTTCCCAATGCAGCCGCG 62.184 66.667 0.00 0.00 42.97 6.46
841 842 2.342650 TTCTTCCCAATGCAGCCGC 61.343 57.895 0.00 0.00 39.24 6.53
842 843 0.962356 AGTTCTTCCCAATGCAGCCG 60.962 55.000 0.00 0.00 0.00 5.52
843 844 1.067354 CAAGTTCTTCCCAATGCAGCC 60.067 52.381 0.00 0.00 0.00 4.85
844 845 1.067354 CCAAGTTCTTCCCAATGCAGC 60.067 52.381 0.00 0.00 0.00 5.25
845 846 2.242043 ACCAAGTTCTTCCCAATGCAG 58.758 47.619 0.00 0.00 0.00 4.41
846 847 2.380064 ACCAAGTTCTTCCCAATGCA 57.620 45.000 0.00 0.00 0.00 3.96
847 848 3.826729 AGTAACCAAGTTCTTCCCAATGC 59.173 43.478 0.00 0.00 0.00 3.56
848 849 6.405278 AAAGTAACCAAGTTCTTCCCAATG 57.595 37.500 0.00 0.00 0.00 2.82
849 850 6.206048 CGTAAAGTAACCAAGTTCTTCCCAAT 59.794 38.462 0.00 0.00 0.00 3.16
850 851 5.528320 CGTAAAGTAACCAAGTTCTTCCCAA 59.472 40.000 0.00 0.00 0.00 4.12
851 852 5.058490 CGTAAAGTAACCAAGTTCTTCCCA 58.942 41.667 0.00 0.00 0.00 4.37
852 853 5.178252 GTCGTAAAGTAACCAAGTTCTTCCC 59.822 44.000 0.00 0.00 0.00 3.97
853 854 5.754890 TGTCGTAAAGTAACCAAGTTCTTCC 59.245 40.000 0.00 0.00 0.00 3.46
854 855 6.833342 TGTCGTAAAGTAACCAAGTTCTTC 57.167 37.500 0.00 0.00 0.00 2.87
859 860 5.663456 TCACTTGTCGTAAAGTAACCAAGT 58.337 37.500 5.40 0.00 42.18 3.16
860 861 6.292703 CCTTCACTTGTCGTAAAGTAACCAAG 60.293 42.308 5.40 0.00 38.34 3.61
882 883 3.259876 TGGAAACACGTGCTATACTCCTT 59.740 43.478 17.22 0.00 33.40 3.36
883 884 2.829720 TGGAAACACGTGCTATACTCCT 59.170 45.455 17.22 0.00 33.40 3.69
892 893 0.665835 TTGGACATGGAAACACGTGC 59.334 50.000 17.22 0.00 45.65 5.34
904 905 9.981114 CCAGAAAAGTAAAATAGTTTTGGACAT 57.019 29.630 7.47 0.00 40.39 3.06
915 916 7.539366 GCATTTACGTGCCAGAAAAGTAAAATA 59.461 33.333 0.00 0.00 39.62 1.40
921 922 2.621055 TGCATTTACGTGCCAGAAAAGT 59.379 40.909 0.00 0.00 44.43 2.66
937 946 1.785041 GCATACGACGCCCATGCATT 61.785 55.000 19.08 0.00 43.59 3.56
952 965 2.478879 CGGACCGCGTATATGATGCATA 60.479 50.000 4.92 0.00 40.42 3.14
978 1000 0.704664 AGGGTTTTGGATGGACTCCC 59.295 55.000 0.00 0.00 44.23 4.30
1007 1029 1.072505 GTGAGGGCGAGGGTTTTGA 59.927 57.895 0.00 0.00 0.00 2.69
1044 1066 1.009335 CGGCGTGATCGATTCGGTA 60.009 57.895 19.75 0.00 39.71 4.02
1045 1067 2.278596 CGGCGTGATCGATTCGGT 60.279 61.111 19.75 0.00 39.71 4.69
1063 1085 1.808390 GGTCGGCATGGTGTACGTC 60.808 63.158 0.00 0.00 0.00 4.34
1117 1145 1.153349 GACAATGGAGGAGGCGGAC 60.153 63.158 0.00 0.00 0.00 4.79
1123 1151 0.596083 CGCTAGCGACAATGGAGGAG 60.596 60.000 32.98 0.00 42.83 3.69
1337 1365 4.070552 AACAGCCTCGTCCTCCGC 62.071 66.667 0.00 0.00 36.19 5.54
1344 1378 2.031163 GTGCCTCAACAGCCTCGT 59.969 61.111 0.00 0.00 0.00 4.18
1480 1533 4.226846 TGCTCTGATTTCTCCAATTCCTCT 59.773 41.667 0.00 0.00 0.00 3.69
1664 1717 2.561885 CGAGAACGTCTCACCGCT 59.438 61.111 13.14 0.00 43.55 5.52
1754 1807 1.067213 ACGTATGGCATTTTTGGTGGC 60.067 47.619 4.78 0.00 41.99 5.01
1778 1831 2.165167 CACTTGTGCCTCCATGTCATT 58.835 47.619 0.00 0.00 0.00 2.57
1852 1919 5.052481 TGAGCCATGTCATATTCTTCTTCG 58.948 41.667 0.00 0.00 0.00 3.79
1925 1992 7.362662 TGATTGCTCAGTTTATCTTCACAAAC 58.637 34.615 0.00 0.00 35.36 2.93
1980 2047 3.554692 GTCGCTCCGCCAATGTCG 61.555 66.667 0.00 0.00 0.00 4.35
2068 2135 1.722034 AGTCAAGGCCTTCAGACTCA 58.278 50.000 25.54 0.39 36.69 3.41
2153 2220 4.994907 TGATTTTCTTATCCCGAGTCGA 57.005 40.909 15.64 0.00 0.00 4.20
2154 2221 4.508124 CCTTGATTTTCTTATCCCGAGTCG 59.492 45.833 5.29 5.29 0.00 4.18
2155 2222 4.816925 CCCTTGATTTTCTTATCCCGAGTC 59.183 45.833 0.00 0.00 0.00 3.36
2156 2223 4.781934 CCCTTGATTTTCTTATCCCGAGT 58.218 43.478 0.00 0.00 0.00 4.18
2164 2231 4.671831 TGTCCATGCCCTTGATTTTCTTA 58.328 39.130 0.00 0.00 0.00 2.10
2219 2286 4.355543 TTCTCGATAAAATTGCACCTGC 57.644 40.909 0.00 0.00 42.50 4.85
2231 2298 8.568794 CAGAGTCCTATGTAACATTCTCGATAA 58.431 37.037 0.00 0.00 0.00 1.75
2236 2303 6.716934 TCCAGAGTCCTATGTAACATTCTC 57.283 41.667 0.00 0.00 0.00 2.87
2247 2314 5.013547 CGTATCCAGATTCCAGAGTCCTAT 58.986 45.833 0.00 0.00 0.00 2.57
2248 2315 4.104261 TCGTATCCAGATTCCAGAGTCCTA 59.896 45.833 0.00 0.00 0.00 2.94
2330 2415 3.006323 AGACACAGTGCCAAACAAAAACA 59.994 39.130 0.00 0.00 0.00 2.83
2331 2416 3.584834 AGACACAGTGCCAAACAAAAAC 58.415 40.909 0.00 0.00 0.00 2.43
2454 2545 9.032624 AGGTACTAGCTGAAAAGACTTGTAATA 57.967 33.333 0.00 0.00 36.02 0.98
2455 2546 7.908453 AGGTACTAGCTGAAAAGACTTGTAAT 58.092 34.615 0.00 0.00 36.02 1.89
2456 2547 7.232941 AGAGGTACTAGCTGAAAAGACTTGTAA 59.767 37.037 0.00 0.00 41.55 2.41
2485 2576 5.090652 TGTACGAAGCAATGAAGACAAAC 57.909 39.130 0.00 0.00 0.00 2.93
2513 2604 0.685097 GTCAGGTTGCAGTACTCCCA 59.315 55.000 0.00 0.00 0.00 4.37
2546 2654 3.305403 CCTGCTAAAGAGTGAACAGACGA 60.305 47.826 0.00 0.00 0.00 4.20
2548 2656 3.996480 ACCTGCTAAAGAGTGAACAGAC 58.004 45.455 0.00 0.00 0.00 3.51
2552 2660 4.134563 TCCAAACCTGCTAAAGAGTGAAC 58.865 43.478 0.00 0.00 0.00 3.18
2575 2683 5.125417 GGCATTTCAGCAAAACCATAGTCTA 59.875 40.000 0.00 0.00 35.83 2.59
2583 2691 0.316841 TCGGGCATTTCAGCAAAACC 59.683 50.000 0.00 0.00 35.83 3.27
2626 2866 7.099764 TGAGCTAAGCTATATATGAAGCCAAC 58.900 38.462 4.21 0.00 39.88 3.77
2636 2876 9.774413 GGGTAAAAACTTGAGCTAAGCTATATA 57.226 33.333 0.00 0.00 39.88 0.86
2645 2885 6.969993 ACATTTGGGTAAAAACTTGAGCTA 57.030 33.333 0.00 0.00 0.00 3.32
2762 3002 9.582223 CGTTCAATTCTAGACTAAACAAAAGAC 57.418 33.333 0.00 0.00 0.00 3.01
2763 3003 8.770828 CCGTTCAATTCTAGACTAAACAAAAGA 58.229 33.333 0.00 0.00 0.00 2.52
2764 3004 8.015658 CCCGTTCAATTCTAGACTAAACAAAAG 58.984 37.037 0.00 0.00 0.00 2.27
2765 3005 7.716123 TCCCGTTCAATTCTAGACTAAACAAAA 59.284 33.333 0.00 0.00 0.00 2.44
2766 3006 7.218614 TCCCGTTCAATTCTAGACTAAACAAA 58.781 34.615 0.00 0.00 0.00 2.83
2767 3007 6.761312 TCCCGTTCAATTCTAGACTAAACAA 58.239 36.000 0.00 0.00 0.00 2.83
2768 3008 6.014840 ACTCCCGTTCAATTCTAGACTAAACA 60.015 38.462 0.00 0.00 0.00 2.83
2769 3009 6.396450 ACTCCCGTTCAATTCTAGACTAAAC 58.604 40.000 0.00 0.00 0.00 2.01
2770 3010 6.600882 ACTCCCGTTCAATTCTAGACTAAA 57.399 37.500 0.00 0.00 0.00 1.85
2771 3011 7.542025 GTTACTCCCGTTCAATTCTAGACTAA 58.458 38.462 0.00 0.00 0.00 2.24
2772 3012 6.183360 CGTTACTCCCGTTCAATTCTAGACTA 60.183 42.308 0.00 0.00 0.00 2.59
2773 3013 5.392811 CGTTACTCCCGTTCAATTCTAGACT 60.393 44.000 0.00 0.00 0.00 3.24
2774 3014 4.797349 CGTTACTCCCGTTCAATTCTAGAC 59.203 45.833 0.00 0.00 0.00 2.59
2775 3015 4.676196 GCGTTACTCCCGTTCAATTCTAGA 60.676 45.833 0.00 0.00 0.00 2.43
2776 3016 3.550678 GCGTTACTCCCGTTCAATTCTAG 59.449 47.826 0.00 0.00 0.00 2.43
2777 3017 3.514645 GCGTTACTCCCGTTCAATTCTA 58.485 45.455 0.00 0.00 0.00 2.10
2778 3018 2.344025 GCGTTACTCCCGTTCAATTCT 58.656 47.619 0.00 0.00 0.00 2.40
2779 3019 1.060122 CGCGTTACTCCCGTTCAATTC 59.940 52.381 0.00 0.00 0.00 2.17
2780 3020 1.073177 CGCGTTACTCCCGTTCAATT 58.927 50.000 0.00 0.00 0.00 2.32
2781 3021 0.244450 TCGCGTTACTCCCGTTCAAT 59.756 50.000 5.77 0.00 0.00 2.57
2782 3022 0.664166 GTCGCGTTACTCCCGTTCAA 60.664 55.000 5.77 0.00 0.00 2.69
2783 3023 1.081242 GTCGCGTTACTCCCGTTCA 60.081 57.895 5.77 0.00 0.00 3.18
2784 3024 1.803117 GGTCGCGTTACTCCCGTTC 60.803 63.158 5.77 0.00 0.00 3.95
2785 3025 2.259511 GGTCGCGTTACTCCCGTT 59.740 61.111 5.77 0.00 0.00 4.44
2786 3026 2.985282 TGGTCGCGTTACTCCCGT 60.985 61.111 5.77 0.00 0.00 5.28
2787 3027 2.505557 GTGGTCGCGTTACTCCCG 60.506 66.667 5.77 0.00 0.00 5.14
2788 3028 0.600782 TTTGTGGTCGCGTTACTCCC 60.601 55.000 5.77 0.00 0.00 4.30
2789 3029 0.788391 CTTTGTGGTCGCGTTACTCC 59.212 55.000 5.77 3.14 0.00 3.85
2790 3030 1.494824 ACTTTGTGGTCGCGTTACTC 58.505 50.000 5.77 0.00 0.00 2.59
2791 3031 1.862827 GAACTTTGTGGTCGCGTTACT 59.137 47.619 5.77 0.00 0.00 2.24
2792 3032 1.862827 AGAACTTTGTGGTCGCGTTAC 59.137 47.619 5.77 4.55 37.49 2.50
2793 3033 2.228138 AGAACTTTGTGGTCGCGTTA 57.772 45.000 5.77 0.00 37.49 3.18
2794 3034 1.375551 AAGAACTTTGTGGTCGCGTT 58.624 45.000 5.77 0.00 37.49 4.84
2795 3035 2.228138 TAAGAACTTTGTGGTCGCGT 57.772 45.000 5.77 0.00 37.49 6.01
2796 3036 2.478894 ACATAAGAACTTTGTGGTCGCG 59.521 45.455 0.00 0.00 37.49 5.87
2797 3037 4.689345 AGTACATAAGAACTTTGTGGTCGC 59.311 41.667 0.00 0.00 37.49 5.19
2798 3038 5.347907 GGAGTACATAAGAACTTTGTGGTCG 59.652 44.000 0.00 0.00 37.49 4.79
2799 3039 5.642491 GGGAGTACATAAGAACTTTGTGGTC 59.358 44.000 0.00 0.00 0.00 4.02
2800 3040 5.309806 AGGGAGTACATAAGAACTTTGTGGT 59.690 40.000 0.00 0.00 0.00 4.16
2801 3041 5.805728 AGGGAGTACATAAGAACTTTGTGG 58.194 41.667 0.00 0.00 0.00 4.17
2802 3042 5.875359 GGAGGGAGTACATAAGAACTTTGTG 59.125 44.000 0.00 0.00 0.00 3.33
2803 3043 5.546499 TGGAGGGAGTACATAAGAACTTTGT 59.454 40.000 0.00 0.00 0.00 2.83
2804 3044 6.049955 TGGAGGGAGTACATAAGAACTTTG 57.950 41.667 0.00 0.00 0.00 2.77
2805 3045 6.126739 GGATGGAGGGAGTACATAAGAACTTT 60.127 42.308 0.00 0.00 0.00 2.66
2806 3046 5.367060 GGATGGAGGGAGTACATAAGAACTT 59.633 44.000 0.00 0.00 0.00 2.66
2807 3047 4.902448 GGATGGAGGGAGTACATAAGAACT 59.098 45.833 0.00 0.00 0.00 3.01
2808 3048 4.040584 GGGATGGAGGGAGTACATAAGAAC 59.959 50.000 0.00 0.00 0.00 3.01
2809 3049 4.232091 GGGATGGAGGGAGTACATAAGAA 58.768 47.826 0.00 0.00 0.00 2.52
2810 3050 3.208922 TGGGATGGAGGGAGTACATAAGA 59.791 47.826 0.00 0.00 0.00 2.10
2811 3051 3.587498 TGGGATGGAGGGAGTACATAAG 58.413 50.000 0.00 0.00 0.00 1.73
2812 3052 3.717507 TGGGATGGAGGGAGTACATAA 57.282 47.619 0.00 0.00 0.00 1.90
2813 3053 3.943269 ATGGGATGGAGGGAGTACATA 57.057 47.619 0.00 0.00 0.00 2.29
2814 3054 2.823460 ATGGGATGGAGGGAGTACAT 57.177 50.000 0.00 0.00 0.00 2.29
2815 3055 3.717507 TTATGGGATGGAGGGAGTACA 57.282 47.619 0.00 0.00 0.00 2.90
2816 3056 7.989947 TTATATTATGGGATGGAGGGAGTAC 57.010 40.000 0.00 0.00 0.00 2.73
2817 3057 9.003145 CATTTATATTATGGGATGGAGGGAGTA 57.997 37.037 0.00 0.00 0.00 2.59
2818 3058 7.465563 ACATTTATATTATGGGATGGAGGGAGT 59.534 37.037 0.00 0.00 0.00 3.85
2819 3059 7.876371 ACATTTATATTATGGGATGGAGGGAG 58.124 38.462 0.00 0.00 0.00 4.30
2820 3060 7.845537 ACATTTATATTATGGGATGGAGGGA 57.154 36.000 0.00 0.00 0.00 4.20
2835 3075 9.391006 ACACTGGTGTCGAAAATACATTTATAT 57.609 29.630 0.01 0.00 40.24 0.86
2836 3076 8.780846 ACACTGGTGTCGAAAATACATTTATA 57.219 30.769 0.01 0.00 40.24 0.98
2837 3077 7.681939 ACACTGGTGTCGAAAATACATTTAT 57.318 32.000 0.01 0.00 40.24 1.40
2838 3078 7.442969 AGAACACTGGTGTCGAAAATACATTTA 59.557 33.333 6.84 0.00 44.13 1.40
2839 3079 6.262273 AGAACACTGGTGTCGAAAATACATTT 59.738 34.615 6.84 0.00 44.13 2.32
2840 3080 5.763204 AGAACACTGGTGTCGAAAATACATT 59.237 36.000 6.84 0.00 44.13 2.71
2841 3081 5.179368 CAGAACACTGGTGTCGAAAATACAT 59.821 40.000 6.84 0.00 44.13 2.29
2842 3082 4.509970 CAGAACACTGGTGTCGAAAATACA 59.490 41.667 6.84 0.00 44.13 2.29
2843 3083 4.510340 ACAGAACACTGGTGTCGAAAATAC 59.490 41.667 6.84 0.00 44.13 1.89
2844 3084 4.699637 ACAGAACACTGGTGTCGAAAATA 58.300 39.130 6.84 0.00 44.13 1.40
2845 3085 3.541632 ACAGAACACTGGTGTCGAAAAT 58.458 40.909 6.84 0.00 44.13 1.82
2846 3086 2.980568 ACAGAACACTGGTGTCGAAAA 58.019 42.857 6.84 0.00 44.13 2.29
2847 3087 2.684001 ACAGAACACTGGTGTCGAAA 57.316 45.000 6.84 0.00 44.13 3.46
2848 3088 3.804786 TTACAGAACACTGGTGTCGAA 57.195 42.857 6.84 0.00 44.13 3.71
2849 3089 3.804786 TTTACAGAACACTGGTGTCGA 57.195 42.857 6.84 0.00 44.13 4.20
2850 3090 6.534059 CATATTTTACAGAACACTGGTGTCG 58.466 40.000 6.84 2.30 44.13 4.35
2851 3091 6.149474 AGCATATTTTACAGAACACTGGTGTC 59.851 38.462 6.84 1.84 44.13 3.67
2853 3093 6.372659 AGAGCATATTTTACAGAACACTGGTG 59.627 38.462 0.00 0.00 36.12 4.17
2854 3094 6.476378 AGAGCATATTTTACAGAACACTGGT 58.524 36.000 0.00 0.00 36.12 4.00
2855 3095 6.992063 AGAGCATATTTTACAGAACACTGG 57.008 37.500 0.00 0.00 36.12 4.00
2871 3111 9.607333 CCCTCTATCCCATAATATAAGAGCATA 57.393 37.037 0.00 0.00 0.00 3.14
2872 3112 8.299871 TCCCTCTATCCCATAATATAAGAGCAT 58.700 37.037 0.00 0.00 0.00 3.79
2873 3113 7.662083 TCCCTCTATCCCATAATATAAGAGCA 58.338 38.462 0.00 0.00 0.00 4.26
2874 3114 8.554490 TTCCCTCTATCCCATAATATAAGAGC 57.446 38.462 0.00 0.00 0.00 4.09
2886 3126 9.393786 GGCTTATATATAATTCCCTCTATCCCA 57.606 37.037 5.64 0.00 0.00 4.37
2887 3127 9.393786 TGGCTTATATATAATTCCCTCTATCCC 57.606 37.037 15.70 0.00 0.00 3.85
2892 3132 8.552296 CCTTGTGGCTTATATATAATTCCCTCT 58.448 37.037 15.70 0.00 0.00 3.69
2893 3133 8.738645 CCTTGTGGCTTATATATAATTCCCTC 57.261 38.462 15.70 12.57 0.00 4.30
2911 3151 0.673644 CTTCTGTACGGGCCTTGTGG 60.674 60.000 0.84 0.00 0.00 4.17
2912 3152 0.320374 TCTTCTGTACGGGCCTTGTG 59.680 55.000 0.84 0.00 0.00 3.33
2913 3153 1.276622 ATCTTCTGTACGGGCCTTGT 58.723 50.000 0.84 4.30 0.00 3.16
2914 3154 2.224066 CCTATCTTCTGTACGGGCCTTG 60.224 54.545 0.84 0.00 0.00 3.61
2915 3155 2.040178 CCTATCTTCTGTACGGGCCTT 58.960 52.381 0.84 0.00 0.00 4.35
2916 3156 1.705873 CCTATCTTCTGTACGGGCCT 58.294 55.000 0.84 0.00 0.00 5.19
2917 3157 0.033642 GCCTATCTTCTGTACGGGCC 59.966 60.000 0.85 0.00 32.86 5.80
2918 3158 0.033642 GGCCTATCTTCTGTACGGGC 59.966 60.000 0.85 0.00 37.61 6.13
2919 3159 1.068741 GTGGCCTATCTTCTGTACGGG 59.931 57.143 3.32 0.00 0.00 5.28
2920 3160 1.068741 GGTGGCCTATCTTCTGTACGG 59.931 57.143 3.32 0.00 0.00 4.02
2921 3161 1.068741 GGGTGGCCTATCTTCTGTACG 59.931 57.143 3.32 0.00 0.00 3.67
2922 3162 2.116238 TGGGTGGCCTATCTTCTGTAC 58.884 52.381 3.32 0.00 0.00 2.90
2923 3163 2.561209 TGGGTGGCCTATCTTCTGTA 57.439 50.000 3.32 0.00 0.00 2.74
2924 3164 1.668826 TTGGGTGGCCTATCTTCTGT 58.331 50.000 3.32 0.00 0.00 3.41
2925 3165 4.141390 ACTTATTGGGTGGCCTATCTTCTG 60.141 45.833 3.32 0.00 0.00 3.02
2926 3166 4.047883 ACTTATTGGGTGGCCTATCTTCT 58.952 43.478 3.32 0.00 0.00 2.85
2927 3167 4.137543 CACTTATTGGGTGGCCTATCTTC 58.862 47.826 3.32 0.00 0.00 2.87
2928 3168 3.688414 GCACTTATTGGGTGGCCTATCTT 60.688 47.826 3.32 0.00 35.47 2.40
2929 3169 2.158608 GCACTTATTGGGTGGCCTATCT 60.159 50.000 3.32 0.00 35.47 1.98
2930 3170 2.230660 GCACTTATTGGGTGGCCTATC 58.769 52.381 3.32 0.00 35.47 2.08
2931 3171 1.568597 TGCACTTATTGGGTGGCCTAT 59.431 47.619 3.32 0.00 35.47 2.57
2932 3172 0.995803 TGCACTTATTGGGTGGCCTA 59.004 50.000 3.32 0.00 35.47 3.93
2933 3173 0.611896 GTGCACTTATTGGGTGGCCT 60.612 55.000 10.32 0.00 35.47 5.19
2934 3174 0.611896 AGTGCACTTATTGGGTGGCC 60.612 55.000 15.25 0.00 35.47 5.36
2935 3175 2.017049 CTAGTGCACTTATTGGGTGGC 58.983 52.381 27.06 0.00 35.47 5.01
2936 3176 2.017049 GCTAGTGCACTTATTGGGTGG 58.983 52.381 27.06 0.52 39.41 4.61
2937 3177 2.679837 CAGCTAGTGCACTTATTGGGTG 59.320 50.000 27.06 19.42 42.74 4.61
2938 3178 2.571653 TCAGCTAGTGCACTTATTGGGT 59.428 45.455 27.06 12.61 42.74 4.51
2939 3179 3.266510 TCAGCTAGTGCACTTATTGGG 57.733 47.619 27.06 10.35 42.74 4.12
2940 3180 4.445453 TGATCAGCTAGTGCACTTATTGG 58.555 43.478 27.06 11.44 42.74 3.16
2941 3181 7.902387 ATATGATCAGCTAGTGCACTTATTG 57.098 36.000 27.06 19.29 42.74 1.90
2942 3182 9.650539 CTTATATGATCAGCTAGTGCACTTATT 57.349 33.333 27.06 7.79 42.74 1.40
2943 3183 8.256605 CCTTATATGATCAGCTAGTGCACTTAT 58.743 37.037 27.06 14.99 42.74 1.73
2944 3184 7.606349 CCTTATATGATCAGCTAGTGCACTTA 58.394 38.462 27.06 8.17 42.74 2.24
2945 3185 6.462500 CCTTATATGATCAGCTAGTGCACTT 58.538 40.000 27.06 5.20 42.74 3.16
2946 3186 5.568423 GCCTTATATGATCAGCTAGTGCACT 60.568 44.000 25.12 25.12 42.74 4.40
2947 3187 4.629200 GCCTTATATGATCAGCTAGTGCAC 59.371 45.833 9.40 9.40 42.74 4.57
2948 3188 4.529769 AGCCTTATATGATCAGCTAGTGCA 59.470 41.667 0.09 0.00 42.74 4.57
2949 3189 5.083533 AGCCTTATATGATCAGCTAGTGC 57.916 43.478 0.09 0.22 40.05 4.40
2950 3190 5.804473 CGAAGCCTTATATGATCAGCTAGTG 59.196 44.000 0.09 0.00 0.00 2.74
2951 3191 5.712446 TCGAAGCCTTATATGATCAGCTAGT 59.288 40.000 0.09 0.00 0.00 2.57
2952 3192 6.201226 TCGAAGCCTTATATGATCAGCTAG 57.799 41.667 0.09 2.07 0.00 3.42
2953 3193 6.782082 ATCGAAGCCTTATATGATCAGCTA 57.218 37.500 0.09 0.00 0.00 3.32
2954 3194 5.674052 ATCGAAGCCTTATATGATCAGCT 57.326 39.130 0.09 0.00 0.00 4.24
2955 3195 6.402983 CCAAATCGAAGCCTTATATGATCAGC 60.403 42.308 0.09 0.00 0.00 4.26
2956 3196 6.402983 GCCAAATCGAAGCCTTATATGATCAG 60.403 42.308 0.09 0.00 0.00 2.90
2957 3197 5.412594 GCCAAATCGAAGCCTTATATGATCA 59.587 40.000 0.00 0.00 0.00 2.92
2958 3198 5.412594 TGCCAAATCGAAGCCTTATATGATC 59.587 40.000 0.00 0.00 0.00 2.92
2959 3199 5.316167 TGCCAAATCGAAGCCTTATATGAT 58.684 37.500 0.00 0.00 0.00 2.45
2960 3200 4.713553 TGCCAAATCGAAGCCTTATATGA 58.286 39.130 0.00 0.00 0.00 2.15
2961 3201 5.009010 ACTTGCCAAATCGAAGCCTTATATG 59.991 40.000 0.00 0.00 0.00 1.78
2962 3202 5.133221 ACTTGCCAAATCGAAGCCTTATAT 58.867 37.500 0.00 0.00 0.00 0.86
2963 3203 4.523083 ACTTGCCAAATCGAAGCCTTATA 58.477 39.130 0.00 0.00 0.00 0.98
2964 3204 3.356290 ACTTGCCAAATCGAAGCCTTAT 58.644 40.909 0.00 0.00 0.00 1.73
2965 3205 2.747446 GACTTGCCAAATCGAAGCCTTA 59.253 45.455 0.00 0.00 0.00 2.69
2966 3206 1.541588 GACTTGCCAAATCGAAGCCTT 59.458 47.619 0.00 0.00 0.00 4.35
2967 3207 1.168714 GACTTGCCAAATCGAAGCCT 58.831 50.000 0.00 0.00 0.00 4.58
2968 3208 0.171231 GGACTTGCCAAATCGAAGCC 59.829 55.000 0.00 0.00 36.34 4.35
2969 3209 0.881118 TGGACTTGCCAAATCGAAGC 59.119 50.000 0.00 0.00 45.87 3.86
2979 3219 7.945134 AGTGAATAATATCATTTGGACTTGCC 58.055 34.615 0.00 0.00 37.10 4.52
3021 3261 9.914131 GGATTAATTTTTCATTATGGACTAGGC 57.086 33.333 0.00 0.00 0.00 3.93
3035 3275 9.150348 CGGGGCATATTTATGGATTAATTTTTC 57.850 33.333 0.10 0.00 34.32 2.29
3036 3276 8.875168 TCGGGGCATATTTATGGATTAATTTTT 58.125 29.630 0.10 0.00 34.32 1.94
3037 3277 8.429237 TCGGGGCATATTTATGGATTAATTTT 57.571 30.769 0.10 0.00 34.32 1.82
3038 3278 8.429237 TTCGGGGCATATTTATGGATTAATTT 57.571 30.769 0.10 0.00 34.32 1.82
3039 3279 8.429237 TTTCGGGGCATATTTATGGATTAATT 57.571 30.769 0.10 0.00 34.32 1.40
3040 3280 8.429237 TTTTCGGGGCATATTTATGGATTAAT 57.571 30.769 0.00 0.00 34.32 1.40
3041 3281 7.841282 TTTTCGGGGCATATTTATGGATTAA 57.159 32.000 0.10 0.00 34.32 1.40
3042 3282 7.507616 AGTTTTTCGGGGCATATTTATGGATTA 59.492 33.333 0.10 0.00 34.32 1.75
3043 3283 6.326323 AGTTTTTCGGGGCATATTTATGGATT 59.674 34.615 0.10 0.00 34.32 3.01
3044 3284 5.838521 AGTTTTTCGGGGCATATTTATGGAT 59.161 36.000 0.10 0.00 34.32 3.41
3045 3285 5.205056 AGTTTTTCGGGGCATATTTATGGA 58.795 37.500 0.10 0.00 34.32 3.41
3046 3286 5.529581 AGTTTTTCGGGGCATATTTATGG 57.470 39.130 0.10 0.00 34.32 2.74
3047 3287 7.812669 GGATTAGTTTTTCGGGGCATATTTATG 59.187 37.037 0.00 0.00 36.78 1.90
3048 3288 7.507616 TGGATTAGTTTTTCGGGGCATATTTAT 59.492 33.333 0.00 0.00 0.00 1.40
3049 3289 6.834451 TGGATTAGTTTTTCGGGGCATATTTA 59.166 34.615 0.00 0.00 0.00 1.40
3050 3290 5.659079 TGGATTAGTTTTTCGGGGCATATTT 59.341 36.000 0.00 0.00 0.00 1.40
3051 3291 5.205056 TGGATTAGTTTTTCGGGGCATATT 58.795 37.500 0.00 0.00 0.00 1.28
3052 3292 4.798882 TGGATTAGTTTTTCGGGGCATAT 58.201 39.130 0.00 0.00 0.00 1.78
3053 3293 4.237976 TGGATTAGTTTTTCGGGGCATA 57.762 40.909 0.00 0.00 0.00 3.14
3054 3294 3.094484 TGGATTAGTTTTTCGGGGCAT 57.906 42.857 0.00 0.00 0.00 4.40
3055 3295 2.588464 TGGATTAGTTTTTCGGGGCA 57.412 45.000 0.00 0.00 0.00 5.36
3056 3296 8.747538 ATATATATGGATTAGTTTTTCGGGGC 57.252 34.615 0.00 0.00 0.00 5.80
3076 3316 9.049523 CCATGCTTCGCTCATGTAAATATATAT 57.950 33.333 0.00 0.00 39.60 0.86
3077 3317 8.257306 TCCATGCTTCGCTCATGTAAATATATA 58.743 33.333 0.00 0.00 39.60 0.86
3078 3318 7.105588 TCCATGCTTCGCTCATGTAAATATAT 58.894 34.615 0.00 0.00 39.60 0.86
3079 3319 6.463360 TCCATGCTTCGCTCATGTAAATATA 58.537 36.000 0.00 0.00 39.60 0.86
3080 3320 5.308014 TCCATGCTTCGCTCATGTAAATAT 58.692 37.500 0.00 0.00 39.60 1.28
3081 3321 4.702831 TCCATGCTTCGCTCATGTAAATA 58.297 39.130 0.00 0.00 39.60 1.40
3082 3322 3.544684 TCCATGCTTCGCTCATGTAAAT 58.455 40.909 0.00 0.00 39.60 1.40
3083 3323 2.938451 CTCCATGCTTCGCTCATGTAAA 59.062 45.455 0.00 0.00 39.60 2.01
3084 3324 2.554142 CTCCATGCTTCGCTCATGTAA 58.446 47.619 0.00 0.12 39.60 2.41
3085 3325 1.202568 CCTCCATGCTTCGCTCATGTA 60.203 52.381 0.00 0.00 39.60 2.29
3086 3326 0.463295 CCTCCATGCTTCGCTCATGT 60.463 55.000 0.00 0.00 39.60 3.21
3087 3327 0.179065 TCCTCCATGCTTCGCTCATG 60.179 55.000 0.00 0.00 40.60 3.07
3088 3328 0.543277 TTCCTCCATGCTTCGCTCAT 59.457 50.000 0.00 0.00 0.00 2.90
3089 3329 0.324614 TTTCCTCCATGCTTCGCTCA 59.675 50.000 0.00 0.00 0.00 4.26
3090 3330 0.729690 GTTTCCTCCATGCTTCGCTC 59.270 55.000 0.00 0.00 0.00 5.03
3091 3331 0.036732 TGTTTCCTCCATGCTTCGCT 59.963 50.000 0.00 0.00 0.00 4.93
3092 3332 0.881118 TTGTTTCCTCCATGCTTCGC 59.119 50.000 0.00 0.00 0.00 4.70
3093 3333 5.505173 AATATTGTTTCCTCCATGCTTCG 57.495 39.130 0.00 0.00 0.00 3.79
3094 3334 9.899226 GTATTAATATTGTTTCCTCCATGCTTC 57.101 33.333 0.00 0.00 0.00 3.86
3095 3335 9.646522 AGTATTAATATTGTTTCCTCCATGCTT 57.353 29.630 0.00 0.00 0.00 3.91
3100 3340 9.555727 GTGCTAGTATTAATATTGTTTCCTCCA 57.444 33.333 0.00 0.00 0.00 3.86
3101 3341 9.780186 AGTGCTAGTATTAATATTGTTTCCTCC 57.220 33.333 0.00 0.00 0.00 4.30
3116 3356 8.035394 CGTGGATGGATTATTAGTGCTAGTATT 58.965 37.037 0.00 0.00 0.00 1.89
3117 3357 7.363880 CCGTGGATGGATTATTAGTGCTAGTAT 60.364 40.741 0.00 0.00 0.00 2.12
3118 3358 6.071560 CCGTGGATGGATTATTAGTGCTAGTA 60.072 42.308 0.00 0.00 0.00 1.82
3119 3359 5.279506 CCGTGGATGGATTATTAGTGCTAGT 60.280 44.000 0.00 0.00 0.00 2.57
3120 3360 5.171476 CCGTGGATGGATTATTAGTGCTAG 58.829 45.833 0.00 0.00 0.00 3.42
3121 3361 4.020573 CCCGTGGATGGATTATTAGTGCTA 60.021 45.833 0.00 0.00 0.00 3.49
3122 3362 3.244561 CCCGTGGATGGATTATTAGTGCT 60.245 47.826 0.00 0.00 0.00 4.40
3123 3363 3.074412 CCCGTGGATGGATTATTAGTGC 58.926 50.000 0.00 0.00 0.00 4.40
3124 3364 4.617253 TCCCGTGGATGGATTATTAGTG 57.383 45.455 0.00 0.00 0.00 2.74
3125 3365 4.505039 GCTTCCCGTGGATGGATTATTAGT 60.505 45.833 7.58 0.00 0.00 2.24
3126 3366 4.003648 GCTTCCCGTGGATGGATTATTAG 58.996 47.826 7.58 0.00 0.00 1.73
3127 3367 3.392947 TGCTTCCCGTGGATGGATTATTA 59.607 43.478 7.58 0.00 0.00 0.98
3128 3368 2.174639 TGCTTCCCGTGGATGGATTATT 59.825 45.455 7.58 0.00 0.00 1.40
3129 3369 1.774254 TGCTTCCCGTGGATGGATTAT 59.226 47.619 7.58 0.00 0.00 1.28
3130 3370 1.140852 CTGCTTCCCGTGGATGGATTA 59.859 52.381 7.58 0.00 0.00 1.75
3131 3371 0.107017 CTGCTTCCCGTGGATGGATT 60.107 55.000 7.58 0.00 0.00 3.01
3132 3372 1.528824 CTGCTTCCCGTGGATGGAT 59.471 57.895 7.58 0.00 0.00 3.41
3133 3373 2.669133 CCTGCTTCCCGTGGATGGA 61.669 63.158 7.58 4.63 0.00 3.41
3134 3374 2.124570 CCTGCTTCCCGTGGATGG 60.125 66.667 7.58 0.00 0.00 3.51
3135 3375 2.124570 CCCTGCTTCCCGTGGATG 60.125 66.667 0.00 0.00 0.00 3.51
3136 3376 3.411517 CCCCTGCTTCCCGTGGAT 61.412 66.667 0.00 0.00 0.00 3.41
3137 3377 4.649705 TCCCCTGCTTCCCGTGGA 62.650 66.667 0.00 0.00 0.00 4.02
3138 3378 4.101448 CTCCCCTGCTTCCCGTGG 62.101 72.222 0.00 0.00 0.00 4.94
3139 3379 3.003173 TCTCCCCTGCTTCCCGTG 61.003 66.667 0.00 0.00 0.00 4.94
3140 3380 2.685380 CTCTCCCCTGCTTCCCGT 60.685 66.667 0.00 0.00 0.00 5.28
3141 3381 2.873557 TACCTCTCCCCTGCTTCCCG 62.874 65.000 0.00 0.00 0.00 5.14
3142 3382 1.003051 TACCTCTCCCCTGCTTCCC 59.997 63.158 0.00 0.00 0.00 3.97
3143 3383 0.325765 ACTACCTCTCCCCTGCTTCC 60.326 60.000 0.00 0.00 0.00 3.46
3144 3384 0.827368 CACTACCTCTCCCCTGCTTC 59.173 60.000 0.00 0.00 0.00 3.86
3145 3385 0.117340 ACACTACCTCTCCCCTGCTT 59.883 55.000 0.00 0.00 0.00 3.91
3146 3386 0.616111 CACACTACCTCTCCCCTGCT 60.616 60.000 0.00 0.00 0.00 4.24
3147 3387 1.901085 CACACTACCTCTCCCCTGC 59.099 63.158 0.00 0.00 0.00 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.