Multiple sequence alignment - TraesCS5B01G383700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G383700 chr5B 100.000 7126 0 0 1 7126 562487589 562494714 0.000000e+00 13160.0
1 TraesCS5B01G383700 chr5B 87.527 465 54 4 4600 5061 562954750 562955213 1.050000e-147 534.0
2 TraesCS5B01G383700 chr5B 80.573 314 50 8 2946 3254 562954028 562954335 1.550000e-56 231.0
3 TraesCS5B01G383700 chr5B 86.207 203 22 1 1036 1232 562952282 562952484 1.560000e-51 215.0
4 TraesCS5B01G383700 chr5B 98.413 63 1 0 1976 2038 185511951 185511889 2.100000e-20 111.0
5 TraesCS5B01G383700 chr5B 100.000 34 0 0 537 570 464897660 464897627 5.970000e-06 63.9
6 TraesCS5B01G383700 chr5B 97.143 35 1 0 540 574 578388617 578388583 7.720000e-05 60.2
7 TraesCS5B01G383700 chr5D 89.248 1609 124 26 2142 3718 458837188 458838779 0.000000e+00 1967.0
8 TraesCS5B01G383700 chr5D 87.741 1607 162 21 3908 5503 458839034 458840616 0.000000e+00 1844.0
9 TraesCS5B01G383700 chr5D 86.210 1269 87 42 751 1971 458835815 458837043 0.000000e+00 1293.0
10 TraesCS5B01G383700 chr5D 86.857 875 85 13 5723 6573 458840975 458841843 0.000000e+00 952.0
11 TraesCS5B01G383700 chr5D 86.538 572 61 8 6565 7126 458842921 458843486 3.650000e-172 616.0
12 TraesCS5B01G383700 chr5D 84.032 620 56 29 917 1515 458818043 458818640 2.250000e-154 556.0
13 TraesCS5B01G383700 chr5D 87.554 466 52 6 4600 5061 458900016 458900479 1.050000e-147 534.0
14 TraesCS5B01G383700 chr5D 92.090 354 18 6 1 344 458834417 458834770 2.310000e-134 490.0
15 TraesCS5B01G383700 chr5D 93.011 186 12 1 338 522 458835506 458835691 3.280000e-68 270.0
16 TraesCS5B01G383700 chr5D 88.119 202 18 1 1036 1231 458897570 458897771 1.200000e-57 235.0
17 TraesCS5B01G383700 chr5D 80.936 299 48 6 2959 3253 458899312 458899605 2.000000e-55 228.0
18 TraesCS5B01G383700 chr5D 86.224 196 21 1 1043 1232 458866940 458867135 2.610000e-49 207.0
19 TraesCS5B01G383700 chr5D 89.744 117 11 1 1661 1776 458829806 458829922 1.600000e-31 148.0
20 TraesCS5B01G383700 chr5D 90.265 113 8 2 3756 3865 458838923 458839035 2.070000e-30 145.0
21 TraesCS5B01G383700 chr5D 95.161 62 3 0 1977 2038 42558206 42558267 1.640000e-16 99.0
22 TraesCS5B01G383700 chr5D 91.429 70 6 0 2085 2154 458837095 458837164 5.880000e-16 97.1
23 TraesCS5B01G383700 chr5D 93.182 44 3 0 2038 2081 278628217 278628174 1.660000e-06 65.8
24 TraesCS5B01G383700 chr5D 100.000 34 0 0 537 570 386888248 386888215 5.970000e-06 63.9
25 TraesCS5B01G383700 chr5D 97.143 35 1 0 540 574 471051814 471051780 7.720000e-05 60.2
26 TraesCS5B01G383700 chr5A 89.928 1380 114 19 2077 3447 577888879 577890242 0.000000e+00 1755.0
27 TraesCS5B01G383700 chr5A 88.977 1388 123 22 3756 5133 577900981 577902348 0.000000e+00 1688.0
28 TraesCS5B01G383700 chr5A 94.266 872 40 7 753 1624 577886930 577887791 0.000000e+00 1325.0
29 TraesCS5B01G383700 chr5A 85.439 1298 145 21 5126 6400 577903547 577904823 0.000000e+00 1310.0
30 TraesCS5B01G383700 chr5A 91.398 558 30 8 1 543 577886296 577886850 0.000000e+00 749.0
31 TraesCS5B01G383700 chr5A 86.081 467 61 4 4600 5063 577934755 577935220 3.840000e-137 499.0
32 TraesCS5B01G383700 chr5A 93.532 201 13 0 1771 1971 577888680 577888880 4.180000e-77 300.0
33 TraesCS5B01G383700 chr5A 87.273 220 22 3 6887 7101 577906070 577906288 5.520000e-61 246.0
34 TraesCS5B01G383700 chr5A 82.609 276 35 9 3452 3718 577900561 577900832 1.550000e-56 231.0
35 TraesCS5B01G383700 chr5A 86.500 200 21 1 1039 1232 577932283 577932482 1.560000e-51 215.0
36 TraesCS5B01G383700 chr5A 79.470 302 50 9 2959 3254 577934046 577934341 3.370000e-48 204.0
37 TraesCS5B01G383700 chr5A 90.435 115 10 1 1661 1775 577888511 577888624 4.450000e-32 150.0
38 TraesCS5B01G383700 chr5A 87.013 77 9 1 1965 2041 451716346 451716421 1.270000e-12 86.1
39 TraesCS5B01G383700 chr5A 95.745 47 2 0 2032 2078 409820357 409820403 7.670000e-10 76.8
40 TraesCS5B01G383700 chr5A 97.674 43 1 0 2036 2078 198201759 198201717 2.760000e-09 75.0
41 TraesCS5B01G383700 chr5A 95.556 45 2 0 602 646 3719304 3719348 9.920000e-09 73.1
42 TraesCS5B01G383700 chr5A 95.556 45 2 0 602 646 3764473 3764517 9.920000e-09 73.1
43 TraesCS5B01G383700 chr5A 95.556 45 2 0 602 646 3777766 3777810 9.920000e-09 73.1
44 TraesCS5B01G383700 chr5A 100.000 34 0 0 537 570 194795122 194795155 5.970000e-06 63.9
45 TraesCS5B01G383700 chr3A 86.422 464 60 3 4600 5061 20218599 20218137 8.250000e-139 505.0
46 TraesCS5B01G383700 chr3A 83.691 466 70 6 4600 5061 20229640 20229177 1.100000e-117 435.0
47 TraesCS5B01G383700 chr3A 79.874 318 42 17 2946 3254 20231256 20230952 5.600000e-51 213.0
48 TraesCS5B01G383700 chr3A 79.402 301 51 9 2959 3254 20225246 20224952 1.210000e-47 202.0
49 TraesCS5B01G383700 chr3A 86.170 188 20 1 1050 1231 20226879 20226692 1.570000e-46 198.0
50 TraesCS5B01G383700 chr3B 86.207 464 61 3 4600 5061 23705973 23706435 3.840000e-137 499.0
51 TraesCS5B01G383700 chr3B 80.000 300 51 7 2959 3254 23705268 23705562 5.600000e-51 213.0
52 TraesCS5B01G383700 chr3D 85.991 464 62 3 4600 5061 16165813 16166275 1.790000e-135 494.0
53 TraesCS5B01G383700 chr3D 80.132 302 47 11 2959 3254 16165109 16165403 5.600000e-51 213.0
54 TraesCS5B01G383700 chr3D 86.170 188 20 1 1050 1231 16163449 16163636 1.570000e-46 198.0
55 TraesCS5B01G383700 chr3D 93.750 64 4 0 1976 2039 317090735 317090672 5.880000e-16 97.1
56 TraesCS5B01G383700 chrUn 90.909 77 3 4 1962 2038 349323557 349323629 4.550000e-17 100.0
57 TraesCS5B01G383700 chrUn 93.617 47 3 0 2036 2082 117380284 117380330 3.570000e-08 71.3
58 TraesCS5B01G383700 chr7A 90.541 74 6 1 1966 2038 64720785 64720858 5.880000e-16 97.1
59 TraesCS5B01G383700 chr7A 84.884 86 11 1 1955 2038 67280144 67280059 1.270000e-12 86.1
60 TraesCS5B01G383700 chr7A 95.556 45 2 0 602 646 693131380 693131424 9.920000e-09 73.1
61 TraesCS5B01G383700 chr7D 93.651 63 4 0 1976 2038 553460226 553460164 2.120000e-15 95.3
62 TraesCS5B01G383700 chr7D 87.755 49 3 2 540 587 610670629 610670583 4.000000e-03 54.7
63 TraesCS5B01G383700 chr1A 90.909 66 5 1 1976 2041 446238284 446238220 3.540000e-13 87.9
64 TraesCS5B01G383700 chr1A 91.304 46 4 0 2036 2081 23823608 23823563 5.970000e-06 63.9
65 TraesCS5B01G383700 chr6B 90.741 54 5 0 2038 2091 333534055 333534002 9.920000e-09 73.1
66 TraesCS5B01G383700 chr6B 90.385 52 5 0 598 649 707820451 707820400 1.280000e-07 69.4
67 TraesCS5B01G383700 chr2B 93.750 48 2 1 2038 2084 142241633 142241586 3.570000e-08 71.3
68 TraesCS5B01G383700 chr2B 95.238 42 1 1 531 571 13727381 13727340 1.660000e-06 65.8
69 TraesCS5B01G383700 chr2B 89.362 47 4 1 531 576 7173262 7173216 2.780000e-04 58.4
70 TraesCS5B01G383700 chr1D 97.500 40 1 0 2039 2078 372657905 372657944 1.280000e-07 69.4
71 TraesCS5B01G383700 chr1D 76.984 126 21 8 3774 3896 346039621 346039501 1.660000e-06 65.8
72 TraesCS5B01G383700 chr2A 91.667 48 4 0 2036 2083 718103929 718103882 4.610000e-07 67.6
73 TraesCS5B01G383700 chr2A 91.304 46 2 2 537 580 727188144 727188099 2.150000e-05 62.1
74 TraesCS5B01G383700 chr4A 90.476 42 4 0 604 645 668743222 668743181 1.000000e-03 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G383700 chr5B 562487589 562494714 7125 False 13160.000000 13160 100.000000 1 7126 1 chr5B.!!$F1 7125
1 TraesCS5B01G383700 chr5B 562952282 562955213 2931 False 326.666667 534 84.769000 1036 5061 3 chr5B.!!$F2 4025
2 TraesCS5B01G383700 chr5D 458834417 458843486 9069 False 852.677778 1967 89.265444 1 7126 9 chr5D.!!$F5 7125
3 TraesCS5B01G383700 chr5D 458818043 458818640 597 False 556.000000 556 84.032000 917 1515 1 chr5D.!!$F2 598
4 TraesCS5B01G383700 chr5D 458897570 458900479 2909 False 332.333333 534 85.536333 1036 5061 3 chr5D.!!$F6 4025
5 TraesCS5B01G383700 chr5A 577900561 577906288 5727 False 868.750000 1688 86.074500 3452 7101 4 chr5A.!!$F8 3649
6 TraesCS5B01G383700 chr5A 577886296 577890242 3946 False 855.800000 1755 91.911800 1 3447 5 chr5A.!!$F7 3446
7 TraesCS5B01G383700 chr5A 577932283 577935220 2937 False 306.000000 499 84.017000 1039 5063 3 chr5A.!!$F9 4024
8 TraesCS5B01G383700 chr3A 20224952 20231256 6304 True 262.000000 435 82.284250 1050 5061 4 chr3A.!!$R2 4011
9 TraesCS5B01G383700 chr3B 23705268 23706435 1167 False 356.000000 499 83.103500 2959 5061 2 chr3B.!!$F1 2102
10 TraesCS5B01G383700 chr3D 16163449 16166275 2826 False 301.666667 494 84.097667 1050 5061 3 chr3D.!!$F1 4011

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
487 1246 0.025513 CGACAGCTAGAAACATGCGC 59.974 55.0 0.00 0.00 0.00 6.09 F
618 1479 0.031585 CGGTTCAAGATATCGGCCGA 59.968 55.0 33.12 33.12 40.04 5.54 F
671 1532 0.460722 TCGACCAATAAATCGGCCGA 59.539 50.0 33.12 33.12 38.86 5.54 F
747 1608 0.464452 GCGGTATCCCTAACACTGCT 59.536 55.0 0.00 0.00 40.62 4.24 F
2419 6851 0.675083 TGTTGCGGTCGAAAGGACTA 59.325 50.0 0.00 0.00 45.35 2.59 F
3397 8030 0.173255 GCAACCGCTGCCATGTTATT 59.827 50.0 0.00 0.00 46.13 1.40 F
3402 8035 1.093972 CGCTGCCATGTTATTCCACA 58.906 50.0 0.00 0.00 0.00 4.17 F
4283 9051 1.108776 TATCGCAACTAGTTCCCGCT 58.891 50.0 16.43 11.57 0.00 5.52 F
5472 11461 0.107410 GTGGTGCATTCACGGGGATA 60.107 55.0 7.27 0.00 44.03 2.59 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1431 5079 0.250295 TGGGTTCAAGTTCAGCTCCG 60.250 55.000 0.00 0.00 0.00 4.63 R
2595 7053 0.249398 ACACAAGGGATAGTCGCCAC 59.751 55.000 0.00 0.00 0.00 5.01 R
2603 7061 2.642311 ACCATGACACACACAAGGGATA 59.358 45.455 0.00 0.00 0.00 2.59 R
2741 7207 0.729116 CACGATGACCATGAAGCACC 59.271 55.000 0.00 0.00 0.00 5.01 R
3417 8050 0.037303 CAGTCATGCACCCTCACCTT 59.963 55.000 0.00 0.00 0.00 3.50 R
4267 9035 0.108992 TGTAGCGGGAACTAGTTGCG 60.109 55.000 19.35 15.41 0.00 4.85 R
5322 11307 0.388659 GTGCTCACATTTGGCCAACA 59.611 50.000 20.35 8.26 0.00 3.33 R
5708 11875 0.527113 TGTGGTTGCATAGCATGTGC 59.473 50.000 0.00 0.00 38.76 4.57 R
6635 13986 0.037326 CAAGAGTAGGCGCCTCACAA 60.037 55.000 36.73 13.68 0.00 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
132 145 7.648039 TTTTAGGGAATTATACAACGGCAAT 57.352 32.000 0.00 0.00 0.00 3.56
201 214 5.675684 TGATGTACAAGTATCTGCAGGAA 57.324 39.130 15.13 0.00 0.00 3.36
202 215 6.239217 TGATGTACAAGTATCTGCAGGAAT 57.761 37.500 15.13 3.23 0.00 3.01
213 226 3.197790 CAGGAATGGAGCGCGTGG 61.198 66.667 8.43 0.00 0.00 4.94
278 291 3.944250 CTGGCCATGACCCCACCAC 62.944 68.421 5.51 0.00 0.00 4.16
317 330 0.535102 AACAGCCAGTCCAGGAAACG 60.535 55.000 0.00 0.00 0.00 3.60
348 1103 4.820897 ACGTGTCTCTAGCAAATGATCAA 58.179 39.130 0.00 0.00 0.00 2.57
357 1115 7.440556 TCTCTAGCAAATGATCAATAGTTGAGC 59.559 37.037 0.00 1.29 45.81 4.26
389 1147 2.028876 GGATGGTTTTACCCCATTCCG 58.971 52.381 0.00 0.00 42.76 4.30
487 1246 0.025513 CGACAGCTAGAAACATGCGC 59.974 55.000 0.00 0.00 0.00 6.09
492 1251 1.927174 AGCTAGAAACATGCGCGTAAG 59.073 47.619 8.43 1.90 43.44 2.34
584 1445 5.066505 GGGAGTAGAAGTTATGCAAATGTGG 59.933 44.000 0.00 0.00 0.00 4.17
593 1454 1.608055 TGCAAATGTGGGTGTCTCTG 58.392 50.000 0.00 0.00 0.00 3.35
597 1458 3.070018 CAAATGTGGGTGTCTCTGAGTC 58.930 50.000 4.32 0.00 0.00 3.36
599 1460 1.040646 TGTGGGTGTCTCTGAGTCAC 58.959 55.000 21.62 21.62 34.31 3.67
601 1462 1.179174 TGGGTGTCTCTGAGTCACGG 61.179 60.000 22.43 0.00 35.57 4.94
603 1464 0.674534 GGTGTCTCTGAGTCACGGTT 59.325 55.000 22.43 0.00 35.57 4.44
604 1465 1.336056 GGTGTCTCTGAGTCACGGTTC 60.336 57.143 22.43 9.90 35.57 3.62
605 1466 1.337071 GTGTCTCTGAGTCACGGTTCA 59.663 52.381 16.90 0.00 0.00 3.18
606 1467 2.028876 TGTCTCTGAGTCACGGTTCAA 58.971 47.619 4.32 0.00 0.00 2.69
607 1468 2.034685 TGTCTCTGAGTCACGGTTCAAG 59.965 50.000 4.32 0.00 0.00 3.02
608 1469 2.293677 GTCTCTGAGTCACGGTTCAAGA 59.706 50.000 4.32 0.00 0.00 3.02
609 1470 3.057174 GTCTCTGAGTCACGGTTCAAGAT 60.057 47.826 4.32 0.00 0.00 2.40
610 1471 4.156190 GTCTCTGAGTCACGGTTCAAGATA 59.844 45.833 4.32 0.00 0.00 1.98
611 1472 4.950475 TCTCTGAGTCACGGTTCAAGATAT 59.050 41.667 4.32 0.00 0.00 1.63
612 1473 5.066634 TCTCTGAGTCACGGTTCAAGATATC 59.933 44.000 4.32 0.00 0.00 1.63
613 1474 4.028852 TGAGTCACGGTTCAAGATATCG 57.971 45.455 0.00 0.00 0.00 2.92
614 1475 3.181490 TGAGTCACGGTTCAAGATATCGG 60.181 47.826 0.00 0.00 0.00 4.18
615 1476 1.859080 GTCACGGTTCAAGATATCGGC 59.141 52.381 0.00 0.00 0.00 5.54
617 1478 0.249322 ACGGTTCAAGATATCGGCCG 60.249 55.000 22.12 22.12 42.86 6.13
618 1479 0.031585 CGGTTCAAGATATCGGCCGA 59.968 55.000 33.12 33.12 40.04 5.54
620 1481 2.094906 CGGTTCAAGATATCGGCCGATA 60.095 50.000 41.34 41.34 40.80 2.92
622 1483 4.504858 GGTTCAAGATATCGGCCGATATT 58.495 43.478 44.74 34.03 44.91 1.28
623 1484 4.567159 GGTTCAAGATATCGGCCGATATTC 59.433 45.833 44.74 36.66 44.91 1.75
624 1485 4.386867 TCAAGATATCGGCCGATATTCC 57.613 45.455 44.74 35.84 44.91 3.01
625 1486 3.116300 CAAGATATCGGCCGATATTCCG 58.884 50.000 44.74 33.99 44.91 4.30
635 1496 3.864003 GGCCGATATTCCGATAAACTAGC 59.136 47.826 0.00 0.00 0.00 3.42
636 1497 3.864003 GCCGATATTCCGATAAACTAGCC 59.136 47.826 0.00 0.00 0.00 3.93
638 1499 4.142534 CCGATATTCCGATAAACTAGCCGA 60.143 45.833 0.00 0.00 0.00 5.54
640 1501 6.034591 CGATATTCCGATAAACTAGCCGATT 58.965 40.000 0.00 0.00 0.00 3.34
641 1502 6.530534 CGATATTCCGATAAACTAGCCGATTT 59.469 38.462 0.00 0.00 0.00 2.17
643 1504 9.530633 GATATTCCGATAAACTAGCCGATTTAT 57.469 33.333 0.00 0.00 34.44 1.40
644 1505 7.829378 ATTCCGATAAACTAGCCGATTTATC 57.171 36.000 11.09 11.09 41.39 1.75
667 1528 6.707711 TCGTTTAAATCGACCAATAAATCGG 58.292 36.000 8.24 0.00 38.86 4.18
668 1529 5.394322 CGTTTAAATCGACCAATAAATCGGC 59.606 40.000 0.00 0.00 38.86 5.54
669 1530 3.982576 AAATCGACCAATAAATCGGCC 57.017 42.857 0.00 0.00 38.86 6.13
671 1532 0.460722 TCGACCAATAAATCGGCCGA 59.539 50.000 33.12 33.12 38.86 5.54
673 1534 2.296752 TCGACCAATAAATCGGCCGATA 59.703 45.455 39.08 26.08 38.86 2.92
674 1535 3.056393 TCGACCAATAAATCGGCCGATAT 60.056 43.478 39.08 27.12 38.86 1.63
675 1536 3.062099 CGACCAATAAATCGGCCGATATG 59.938 47.826 39.08 30.40 34.67 1.78
676 1537 4.250464 GACCAATAAATCGGCCGATATGA 58.750 43.478 39.08 26.55 33.97 2.15
677 1538 4.647611 ACCAATAAATCGGCCGATATGAA 58.352 39.130 39.08 24.22 33.97 2.57
678 1539 4.695455 ACCAATAAATCGGCCGATATGAAG 59.305 41.667 39.08 26.74 33.97 3.02
679 1540 4.935205 CCAATAAATCGGCCGATATGAAGA 59.065 41.667 39.08 20.74 33.97 2.87
680 1541 5.586243 CCAATAAATCGGCCGATATGAAGAT 59.414 40.000 39.08 20.34 33.97 2.40
682 1543 7.279981 CCAATAAATCGGCCGATATGAAGATAA 59.720 37.037 39.08 17.08 33.97 1.75
683 1544 8.664798 CAATAAATCGGCCGATATGAAGATAAA 58.335 33.333 39.08 14.76 33.97 1.40
686 1547 6.668541 ATCGGCCGATATGAAGATAAATTG 57.331 37.500 38.39 0.00 32.36 2.32
688 1549 5.637810 TCGGCCGATATGAAGATAAATTGTC 59.362 40.000 27.28 0.00 0.00 3.18
690 1551 5.705441 GGCCGATATGAAGATAAATTGTCCA 59.295 40.000 0.00 0.00 0.00 4.02
693 1554 8.946085 GCCGATATGAAGATAAATTGTCCAATA 58.054 33.333 0.00 0.00 0.00 1.90
723 1584 9.341899 CTAAGAAGGTCGACCAATAAATTTTTG 57.658 33.333 35.00 14.11 38.89 2.44
724 1585 7.519032 AGAAGGTCGACCAATAAATTTTTGA 57.481 32.000 35.00 0.00 38.89 2.69
726 1587 9.238368 AGAAGGTCGACCAATAAATTTTTGATA 57.762 29.630 35.00 0.00 38.89 2.15
727 1588 9.849166 GAAGGTCGACCAATAAATTTTTGATAA 57.151 29.630 35.00 0.00 38.89 1.75
729 1590 7.973944 AGGTCGACCAATAAATTTTTGATAAGC 59.026 33.333 35.00 1.75 38.89 3.09
730 1591 7.044314 GGTCGACCAATAAATTTTTGATAAGCG 60.044 37.037 29.75 0.00 35.64 4.68
732 1593 6.750039 CGACCAATAAATTTTTGATAAGCGGT 59.250 34.615 0.00 0.00 0.00 5.68
734 1595 9.744468 GACCAATAAATTTTTGATAAGCGGTAT 57.256 29.630 0.00 0.00 0.00 2.73
735 1596 9.744468 ACCAATAAATTTTTGATAAGCGGTATC 57.256 29.630 0.00 4.08 39.38 2.24
736 1597 9.191995 CCAATAAATTTTTGATAAGCGGTATCC 57.808 33.333 0.00 0.00 38.31 2.59
738 1599 8.706322 ATAAATTTTTGATAAGCGGTATCCCT 57.294 30.769 0.00 0.00 38.31 4.20
739 1600 9.802039 ATAAATTTTTGATAAGCGGTATCCCTA 57.198 29.630 0.00 0.00 38.31 3.53
741 1602 6.930667 TTTTTGATAAGCGGTATCCCTAAC 57.069 37.500 7.68 0.00 38.31 2.34
742 1603 5.617528 TTTGATAAGCGGTATCCCTAACA 57.382 39.130 7.68 0.00 38.31 2.41
743 1604 4.595762 TGATAAGCGGTATCCCTAACAC 57.404 45.455 7.68 0.00 38.31 3.32
745 1606 2.981859 AAGCGGTATCCCTAACACTG 57.018 50.000 0.00 0.00 0.00 3.66
747 1608 0.464452 GCGGTATCCCTAACACTGCT 59.536 55.000 0.00 0.00 40.62 4.24
748 1609 1.538419 GCGGTATCCCTAACACTGCTC 60.538 57.143 0.00 0.00 40.62 4.26
749 1610 2.032620 CGGTATCCCTAACACTGCTCT 58.967 52.381 0.00 0.00 0.00 4.09
909 1775 5.538877 TGGAATGGATAAGTAGGAGGAAGT 58.461 41.667 0.00 0.00 0.00 3.01
1083 4412 1.890876 CCATCCTGTTGAAACCGTCA 58.109 50.000 0.00 0.00 0.00 4.35
1251 4883 2.027745 ACACCCTCACTTGAGCATGTAG 60.028 50.000 10.37 0.00 40.75 2.74
1343 4991 1.544724 TGCTACACCCCTTGCATTTC 58.455 50.000 0.00 0.00 0.00 2.17
1366 5014 4.371786 TCACTAACTCTTTCTGCACTGTG 58.628 43.478 2.76 2.76 0.00 3.66
1367 5015 3.059325 CACTAACTCTTTCTGCACTGTGC 60.059 47.826 25.15 25.15 45.29 4.57
1431 5079 2.029844 GCCAAGCGAGGACTGTGAC 61.030 63.158 1.32 0.00 0.00 3.67
1433 5081 1.734477 CAAGCGAGGACTGTGACGG 60.734 63.158 0.00 0.00 0.00 4.79
1446 5094 1.138069 TGTGACGGAGCTGAACTTGAA 59.862 47.619 0.00 0.00 0.00 2.69
1551 5199 3.486383 ACGGTTTCTGGTTCAACATCAT 58.514 40.909 0.00 0.00 0.00 2.45
1614 5262 8.387354 CCTGAAAACAAAAACAGGTTCAAATAC 58.613 33.333 0.00 0.00 43.16 1.89
1726 6056 4.396166 AGTTGCCTTGAGATATTTGTTCCG 59.604 41.667 0.00 0.00 0.00 4.30
1734 6064 7.201617 CCTTGAGATATTTGTTCCGGTTACTTC 60.202 40.741 0.00 0.00 0.00 3.01
1743 6073 2.070783 TCCGGTTACTTCAACGCATTC 58.929 47.619 0.00 0.00 38.09 2.67
1756 6086 3.602390 ACGCATTCACCAAATATACGC 57.398 42.857 0.00 0.00 0.00 4.42
1757 6087 3.202906 ACGCATTCACCAAATATACGCT 58.797 40.909 0.00 0.00 0.00 5.07
1761 6091 4.273480 GCATTCACCAAATATACGCTGACT 59.727 41.667 0.00 0.00 0.00 3.41
1769 6099 5.332581 CCAAATATACGCTGACTCACATTCG 60.333 44.000 0.00 0.00 0.00 3.34
1868 6263 5.356882 ACATTTGACCGACAATTACACTG 57.643 39.130 0.00 0.00 38.36 3.66
1881 6276 9.962759 CGACAATTACACTGTTAATAAGTAACC 57.037 33.333 0.00 0.00 41.35 2.85
1996 6391 7.988028 ACACTCTCTGTAAAGAAATATAAGGGC 59.012 37.037 0.00 0.00 0.00 5.19
1997 6392 7.169982 CACTCTCTGTAAAGAAATATAAGGGCG 59.830 40.741 0.00 0.00 0.00 6.13
1998 6393 7.120923 TCTCTGTAAAGAAATATAAGGGCGT 57.879 36.000 0.00 0.00 0.00 5.68
1999 6394 7.562135 TCTCTGTAAAGAAATATAAGGGCGTT 58.438 34.615 0.00 0.00 0.00 4.84
2002 6397 9.321562 TCTGTAAAGAAATATAAGGGCGTTTAG 57.678 33.333 0.00 0.00 0.00 1.85
2003 6398 9.321562 CTGTAAAGAAATATAAGGGCGTTTAGA 57.678 33.333 0.00 0.00 0.00 2.10
2004 6399 9.841295 TGTAAAGAAATATAAGGGCGTTTAGAT 57.159 29.630 0.00 0.00 0.00 1.98
2007 6402 7.964604 AGAAATATAAGGGCGTTTAGATCAC 57.035 36.000 0.00 0.00 0.00 3.06
2008 6403 7.736893 AGAAATATAAGGGCGTTTAGATCACT 58.263 34.615 0.00 0.00 0.00 3.41
2009 6404 8.867097 AGAAATATAAGGGCGTTTAGATCACTA 58.133 33.333 0.00 0.00 0.00 2.74
2010 6405 8.828688 AAATATAAGGGCGTTTAGATCACTAC 57.171 34.615 0.00 0.00 0.00 2.73
2011 6406 7.778185 ATATAAGGGCGTTTAGATCACTACT 57.222 36.000 0.00 0.00 0.00 2.57
2012 6407 4.820894 AAGGGCGTTTAGATCACTACTT 57.179 40.909 0.00 0.00 0.00 2.24
2014 6409 5.927281 AGGGCGTTTAGATCACTACTTTA 57.073 39.130 0.00 0.00 0.00 1.85
2015 6410 5.903810 AGGGCGTTTAGATCACTACTTTAG 58.096 41.667 0.00 0.00 0.00 1.85
2016 6411 5.421374 AGGGCGTTTAGATCACTACTTTAGT 59.579 40.000 0.00 0.00 40.28 2.24
2028 6423 8.191534 ATCACTACTTTAGTGGTCTAAACACT 57.808 34.615 12.33 2.82 46.78 3.55
2029 6424 8.305317 ATCACTACTTTAGTGGTCTAAACACTC 58.695 37.037 12.33 0.00 46.78 3.51
2030 6425 7.836479 ACTACTTTAGTGGTCTAAACACTCT 57.164 36.000 0.00 0.00 45.50 3.24
2031 6426 8.247666 ACTACTTTAGTGGTCTAAACACTCTT 57.752 34.615 0.00 0.00 45.50 2.85
2032 6427 9.359653 ACTACTTTAGTGGTCTAAACACTCTTA 57.640 33.333 0.00 0.00 45.50 2.10
2106 6501 9.178758 AGATTAATTTGGAATGAAGACAGTACC 57.821 33.333 0.00 0.00 0.00 3.34
2109 6504 1.066430 TGGAATGAAGACAGTACCGCC 60.066 52.381 0.00 0.00 0.00 6.13
2169 6600 2.159057 GCTTCCAAACCCATGGCTAATG 60.159 50.000 6.09 2.12 40.46 1.90
2180 6611 5.104817 ACCCATGGCTAATGATTTTCCAAAG 60.105 40.000 6.09 0.00 38.72 2.77
2184 6615 7.064966 CCATGGCTAATGATTTTCCAAAGAAAC 59.935 37.037 0.00 0.00 38.94 2.78
2185 6616 7.060383 TGGCTAATGATTTTCCAAAGAAACA 57.940 32.000 0.00 0.00 41.69 2.83
2186 6617 7.153985 TGGCTAATGATTTTCCAAAGAAACAG 58.846 34.615 0.00 0.00 41.69 3.16
2187 6618 7.154656 GGCTAATGATTTTCCAAAGAAACAGT 58.845 34.615 0.00 0.00 41.69 3.55
2188 6619 7.116805 GGCTAATGATTTTCCAAAGAAACAGTG 59.883 37.037 0.00 0.00 41.69 3.66
2265 6697 6.195700 AGCCACTATTGACTAACTTCCTAGA 58.804 40.000 0.00 0.00 0.00 2.43
2278 6710 5.041191 ACTTCCTAGACCATGGCTAATTG 57.959 43.478 13.04 6.26 0.00 2.32
2284 6716 5.652014 CCTAGACCATGGCTAATTGTTTTCA 59.348 40.000 13.04 0.00 0.00 2.69
2391 6823 6.091713 ACATACCGAGGTGATTTTTCTTTACG 59.908 38.462 4.80 0.00 0.00 3.18
2419 6851 0.675083 TGTTGCGGTCGAAAGGACTA 59.325 50.000 0.00 0.00 45.35 2.59
2515 6947 5.422012 TGACCAGATGCTACTAGAACAATCA 59.578 40.000 0.00 0.00 0.00 2.57
2529 6961 9.032624 ACTAGAACAATCAACTAAGGTAGCTTA 57.967 33.333 13.49 13.49 0.00 3.09
2539 6971 9.515226 TCAACTAAGGTAGCTTATGTTTGAATT 57.485 29.630 20.36 5.35 0.00 2.17
2603 7061 1.141657 AGCAATCATATGGTGGCGACT 59.858 47.619 9.75 0.00 0.00 4.18
2624 7082 0.843309 TCCCTTGTGTGTGTCATGGT 59.157 50.000 0.00 0.00 0.00 3.55
2627 7085 1.264020 CCTTGTGTGTGTCATGGTTCG 59.736 52.381 0.00 0.00 0.00 3.95
2741 7207 6.460925 GTCATTTCACGGTAGTGCATGACG 62.461 50.000 18.77 0.00 46.49 4.35
2789 7255 7.768120 AGAAAATTACCAATTGTGCAAAGTTCA 59.232 29.630 4.43 0.00 0.00 3.18
2877 7484 8.533657 TCATTGCATGAATTTCCTTACTTTCAT 58.466 29.630 0.00 0.00 38.89 2.57
2982 7589 6.558771 TGTCAAACCAAATGTGTGATCTAG 57.441 37.500 0.00 0.00 43.12 2.43
3147 7759 7.672983 TCTGTTACTTCATGAATTTCCTGTC 57.327 36.000 8.96 0.00 0.00 3.51
3244 7856 4.082245 CCTTTATTGGGCACACAAGGTAAG 60.082 45.833 11.26 6.26 33.23 2.34
3254 7867 4.622740 GCACACAAGGTAAGATGATTTTGC 59.377 41.667 0.00 0.00 0.00 3.68
3320 7952 8.437360 AATGTCGATCATATTTTAGAAGCACA 57.563 30.769 0.00 0.00 35.48 4.57
3322 7954 7.854534 TGTCGATCATATTTTAGAAGCACATG 58.145 34.615 0.00 0.00 0.00 3.21
3324 7956 8.715998 GTCGATCATATTTTAGAAGCACATGAT 58.284 33.333 0.00 0.00 35.07 2.45
3335 7967 6.917217 AGAAGCACATGATTAGCTAGTTTC 57.083 37.500 0.00 0.00 37.70 2.78
3368 8000 7.066525 GCAGTGAGACAAGAAGTAGACTATAGT 59.933 40.741 4.68 4.68 0.00 2.12
3384 8017 2.639286 GTGCAACTCTGGCAACCG 59.361 61.111 0.00 0.00 43.91 4.44
3397 8030 0.173255 GCAACCGCTGCCATGTTATT 59.827 50.000 0.00 0.00 46.13 1.40
3402 8035 1.093972 CGCTGCCATGTTATTCCACA 58.906 50.000 0.00 0.00 0.00 4.17
3417 8050 8.687242 TGTTATTCCACAGTTATCACAAAAACA 58.313 29.630 0.00 0.00 0.00 2.83
3419 8052 9.743057 TTATTCCACAGTTATCACAAAAACAAG 57.257 29.630 0.00 0.00 0.00 3.16
3421 8054 5.654650 TCCACAGTTATCACAAAAACAAGGT 59.345 36.000 0.00 0.00 0.00 3.50
3425 8058 6.183360 ACAGTTATCACAAAAACAAGGTGAGG 60.183 38.462 0.00 0.00 43.96 3.86
3447 8080 1.552792 TGCATGACTGGGTCGAATGTA 59.447 47.619 0.00 0.00 34.95 2.29
3448 8081 2.205074 GCATGACTGGGTCGAATGTAG 58.795 52.381 0.00 0.00 34.95 2.74
3461 8094 3.822167 TCGAATGTAGGTGTGTGTAGTGA 59.178 43.478 0.00 0.00 0.00 3.41
3468 8101 1.134037 GGTGTGTGTAGTGACCCCAAA 60.134 52.381 0.00 0.00 0.00 3.28
3469 8102 2.645802 GTGTGTGTAGTGACCCCAAAA 58.354 47.619 0.00 0.00 0.00 2.44
3512 8146 5.003804 TGTTTAGGATTTCTTGCTGAGGAC 58.996 41.667 0.00 0.00 0.00 3.85
3530 8164 7.575532 GCTGAGGACAATGAACATGATTGTTTA 60.576 37.037 11.35 0.00 46.01 2.01
3576 8210 2.014033 GAACCCCCACAAGACCCCAA 62.014 60.000 0.00 0.00 0.00 4.12
3598 8232 7.014615 CCCAATAGGTAATCCCATTTTCAAGAG 59.985 40.741 0.00 0.00 34.66 2.85
3610 8244 2.275134 TTCAAGAGCATGCAAGACCA 57.725 45.000 21.98 0.00 0.00 4.02
3621 8255 4.802039 GCATGCAAGACCATCTACATTTTG 59.198 41.667 14.21 0.00 0.00 2.44
3630 8264 7.147976 AGACCATCTACATTTTGTTTTTCAGC 58.852 34.615 0.00 0.00 0.00 4.26
3659 8293 6.038356 GCAAACCCTCAACATCATCAATTAG 58.962 40.000 0.00 0.00 0.00 1.73
3691 8334 8.942338 ATATTTCGACTAAAATAGAGCACACA 57.058 30.769 0.00 0.00 35.25 3.72
3718 8362 6.890268 GGAACTATAACTTCACCCTCCATTTT 59.110 38.462 0.00 0.00 0.00 1.82
3719 8363 7.396339 GGAACTATAACTTCACCCTCCATTTTT 59.604 37.037 0.00 0.00 0.00 1.94
3752 8396 9.828039 AGCATAACTAACTAAATAGGTAACCAC 57.172 33.333 0.00 0.00 29.31 4.16
3753 8397 9.603921 GCATAACTAACTAAATAGGTAACCACA 57.396 33.333 0.00 0.00 29.31 4.17
4004 8771 5.426504 TGAAACCAATTCTTGCAACAACAT 58.573 33.333 0.00 0.00 38.92 2.71
4007 8774 2.481185 CCAATTCTTGCAACAACATGCC 59.519 45.455 0.00 0.00 45.83 4.40
4018 8785 3.939740 ACAACATGCCAGGTATCATCT 57.060 42.857 0.00 0.00 0.00 2.90
4063 8830 5.734220 GCAATACAATGCCACCTCAACATAG 60.734 44.000 0.00 0.00 40.49 2.23
4139 8906 5.876460 GCTTTCCATTTGATTATGCCACTTT 59.124 36.000 0.00 0.00 0.00 2.66
4214 8982 5.047847 TGTTTTCTAGTTTCAGTCCTCACG 58.952 41.667 0.00 0.00 0.00 4.35
4229 8997 7.118680 TCAGTCCTCACGTTATTAATCCAAAAC 59.881 37.037 0.00 0.00 0.00 2.43
4239 9007 9.619316 CGTTATTAATCCAAAACTTCATGTTCA 57.381 29.630 0.00 0.00 38.03 3.18
4259 9027 6.478344 TGTTCAAAACAACCAAATATCACTGC 59.522 34.615 0.00 0.00 38.72 4.40
4283 9051 1.108776 TATCGCAACTAGTTCCCGCT 58.891 50.000 16.43 11.57 0.00 5.52
4288 9056 2.629051 GCAACTAGTTCCCGCTACAAT 58.371 47.619 4.77 0.00 0.00 2.71
4293 9061 2.128771 AGTTCCCGCTACAATGCATT 57.871 45.000 5.99 5.99 0.00 3.56
4294 9062 2.017049 AGTTCCCGCTACAATGCATTC 58.983 47.619 9.53 0.00 0.00 2.67
4305 9073 6.358822 CGCTACAATGCATTCTGTATCATTTG 59.641 38.462 9.53 0.00 0.00 2.32
4325 9093 8.859090 TCATTTGGTTTGATGAACACTTCTAAT 58.141 29.630 0.00 0.00 40.13 1.73
4343 9114 5.141182 TCTAATAAGTGTTTGGGCCAACAA 58.859 37.500 20.79 7.27 0.00 2.83
4437 9209 4.191544 TGAGGAAGCATGAATCCTAAACG 58.808 43.478 16.99 0.00 46.04 3.60
4444 9216 3.632145 GCATGAATCCTAAACGTGGGAAT 59.368 43.478 0.00 1.78 38.03 3.01
4461 9233 7.285401 ACGTGGGAATAATTGCTATTCTTGAAT 59.715 33.333 0.00 1.35 43.80 2.57
4463 9235 8.632679 GTGGGAATAATTGCTATTCTTGAATGA 58.367 33.333 6.15 0.00 43.80 2.57
4496 9268 9.660180 ATTTTCTCAAAGTCTAGATCTGGTTAC 57.340 33.333 5.18 0.00 0.00 2.50
4524 9296 9.261180 TGACTCTTACTTTATTGTGTCTTTCAG 57.739 33.333 0.00 0.00 0.00 3.02
4542 9314 8.454894 GTCTTTCAGTTTATTCCTTGGAGAATC 58.545 37.037 0.00 0.00 37.62 2.52
4544 9316 9.672673 CTTTCAGTTTATTCCTTGGAGAATCTA 57.327 33.333 0.00 0.00 37.62 1.98
4587 9359 7.637709 ATTTTTACTTGGTTTGAATCTTCGC 57.362 32.000 0.00 0.00 0.00 4.70
4593 9365 3.420893 TGGTTTGAATCTTCGCCTCAAT 58.579 40.909 0.00 0.00 0.00 2.57
4671 9446 6.948309 AGAACAATATTCCTGTATATTGCCCC 59.052 38.462 13.29 6.13 45.77 5.80
4764 9539 7.604549 TCGACATTGTACAAGGTAAACTATGA 58.395 34.615 24.47 11.46 35.27 2.15
4798 9574 9.063615 ACCTTACTTACTTTATTGTGGTTTCAG 57.936 33.333 0.00 0.00 0.00 3.02
4831 9609 8.538409 AAATTTTTGCAGATGTAAGGTTGATC 57.462 30.769 0.00 0.00 0.00 2.92
4885 9663 6.353602 GGAAGACAGGGGTTATAATTCTTGGA 60.354 42.308 0.00 0.00 0.00 3.53
5042 9820 3.444034 GGGAAAGATTAAGGGTTCAGCAC 59.556 47.826 0.00 0.00 0.00 4.40
5159 11144 9.590451 AATCACATATGAAAAACTAGGCATTTG 57.410 29.630 10.38 0.00 38.69 2.32
5165 11150 7.951530 ATGAAAAACTAGGCATTTGAGTTTG 57.048 32.000 0.00 0.00 41.39 2.93
5188 11173 8.792831 TTGTATAGAATAGTAAACTAGCACGC 57.207 34.615 0.00 0.00 0.00 5.34
5189 11174 7.933396 TGTATAGAATAGTAAACTAGCACGCA 58.067 34.615 0.00 0.00 0.00 5.24
5190 11175 7.859377 TGTATAGAATAGTAAACTAGCACGCAC 59.141 37.037 0.00 0.00 0.00 5.34
5195 11180 2.028476 AGTAAACTAGCACGCACATCCA 60.028 45.455 0.00 0.00 0.00 3.41
5196 11181 2.113860 AAACTAGCACGCACATCCAT 57.886 45.000 0.00 0.00 0.00 3.41
5205 11190 2.346244 CACGCACATCCATCAAATTTGC 59.654 45.455 13.54 0.00 0.00 3.68
5207 11192 2.994578 CGCACATCCATCAAATTTGCAA 59.005 40.909 13.54 0.00 30.92 4.08
5253 11238 8.946085 GGAACAAATGAGATTAGAACACATACA 58.054 33.333 0.00 0.00 0.00 2.29
5261 11246 8.204160 TGAGATTAGAACACATACATTGGTAGG 58.796 37.037 0.00 0.00 37.31 3.18
5264 11249 8.732746 ATTAGAACACATACATTGGTAGGAAC 57.267 34.615 0.00 0.00 34.97 3.62
5266 11251 3.869065 ACACATACATTGGTAGGAACGG 58.131 45.455 0.00 0.00 34.97 4.44
5268 11253 4.258543 CACATACATTGGTAGGAACGGTT 58.741 43.478 0.00 0.00 34.97 4.44
5273 11258 1.956297 TTGGTAGGAACGGTTGTGTG 58.044 50.000 0.00 0.00 0.00 3.82
5279 11264 2.494059 AGGAACGGTTGTGTGATTCAG 58.506 47.619 0.00 0.00 0.00 3.02
5292 11277 1.271871 TGATTCAGGGTGTCGCCAAAT 60.272 47.619 4.48 0.95 39.65 2.32
5302 11287 3.492313 GTGTCGCCAAATCATTGAGTTC 58.508 45.455 0.00 0.00 38.94 3.01
5322 11307 9.175312 TGAGTTCAAGATATCGTAGTAGAAGTT 57.825 33.333 0.00 0.00 0.00 2.66
5328 11313 6.505272 AGATATCGTAGTAGAAGTTGTTGGC 58.495 40.000 0.00 0.00 0.00 4.52
5335 11320 4.215109 AGTAGAAGTTGTTGGCCAAATGT 58.785 39.130 22.47 3.73 34.07 2.71
5341 11326 0.388659 TGTTGGCCAAATGTGAGCAC 59.611 50.000 22.47 5.50 0.00 4.40
5361 11346 3.660724 GCCCCTTAGATGGCCAGA 58.339 61.111 13.05 0.00 41.97 3.86
5385 11370 4.248859 GCAGTTCTAGAGACAAGCATTCA 58.751 43.478 0.00 0.00 0.00 2.57
5387 11372 5.718146 CAGTTCTAGAGACAAGCATTCAGA 58.282 41.667 0.00 0.00 0.00 3.27
5389 11374 5.244851 AGTTCTAGAGACAAGCATTCAGACA 59.755 40.000 0.00 0.00 0.00 3.41
5399 11384 1.863454 GCATTCAGACACTGCTATCGG 59.137 52.381 0.00 0.00 33.15 4.18
5416 11401 0.389817 CGGTGCGGTTCTCAAGATGA 60.390 55.000 0.00 0.00 0.00 2.92
5422 11407 2.354203 GCGGTTCTCAAGATGAGGAAGT 60.354 50.000 7.47 0.00 44.39 3.01
5449 11438 4.961438 ACACATCAAAAAGGGAGCAATT 57.039 36.364 0.00 0.00 0.00 2.32
5472 11461 0.107410 GTGGTGCATTCACGGGGATA 60.107 55.000 7.27 0.00 44.03 2.59
5479 11468 1.136305 CATTCACGGGGATACACTCGT 59.864 52.381 0.00 0.00 38.54 4.18
5503 11492 2.233922 AGGACGTGTGAGGGTTAATCAG 59.766 50.000 0.00 0.00 0.00 2.90
5504 11493 2.618053 GACGTGTGAGGGTTAATCAGG 58.382 52.381 0.00 0.00 0.00 3.86
5518 11507 6.782494 GGGTTAATCAGGATTGGATTGGTAAT 59.218 38.462 4.81 0.00 36.45 1.89
5527 11516 5.480422 GGATTGGATTGGTAATTATCCCACC 59.520 44.000 3.08 0.00 39.69 4.61
5528 11517 4.093472 TGGATTGGTAATTATCCCACCG 57.907 45.455 3.08 0.00 39.69 4.94
5530 11519 3.482436 GATTGGTAATTATCCCACCGCA 58.518 45.455 0.00 0.00 34.94 5.69
5540 11529 2.142356 TCCCACCGCATGAATCAATT 57.858 45.000 0.00 0.00 0.00 2.32
5578 11744 4.485163 CCCATTAACTTAGCTTTGTGTGC 58.515 43.478 0.00 0.00 0.00 4.57
5601 11767 0.675837 GGCAAGCAGATGAGTGAGCA 60.676 55.000 0.00 0.00 0.00 4.26
5603 11769 1.743958 GCAAGCAGATGAGTGAGCAAT 59.256 47.619 0.00 0.00 0.00 3.56
5607 11773 4.684484 AGCAGATGAGTGAGCAATCATA 57.316 40.909 12.69 0.00 44.89 2.15
5608 11774 4.378774 AGCAGATGAGTGAGCAATCATAC 58.621 43.478 12.69 6.67 44.89 2.39
5636 11802 5.183904 AGTCCAATGTTCTCATGTTTTAGGC 59.816 40.000 0.00 0.00 34.19 3.93
5655 11822 2.356741 GGCAGGTATAAGCAAGAACCCA 60.357 50.000 0.00 0.00 32.10 4.51
5673 11840 4.941713 ACCCATTATTTGTTGGCCTTCTA 58.058 39.130 3.32 0.00 0.00 2.10
5677 11844 7.621683 ACCCATTATTTGTTGGCCTTCTATTAA 59.378 33.333 3.32 2.32 0.00 1.40
5682 11849 9.969001 TTATTTGTTGGCCTTCTATTAACTACT 57.031 29.630 3.32 0.00 0.00 2.57
5684 11851 9.614792 ATTTGTTGGCCTTCTATTAACTACTAG 57.385 33.333 3.32 0.00 0.00 2.57
5708 11875 2.416547 CACAATGTGGGACTAAGCTTCG 59.583 50.000 0.00 0.00 0.00 3.79
5743 11910 4.961438 ACCACAAATGAGCCTTTGAAAT 57.039 36.364 10.07 0.00 38.17 2.17
5744 11911 4.634199 ACCACAAATGAGCCTTTGAAATG 58.366 39.130 10.07 0.65 38.17 2.32
5752 11919 3.118847 TGAGCCTTTGAAATGTTTGCACA 60.119 39.130 0.00 0.00 37.31 4.57
5769 11936 7.042456 TGTTTGCACAAATTATTGCGTAACATT 60.042 29.630 18.12 0.00 41.96 2.71
5778 11945 4.592485 ATTGCGTAACATTGTCCCAAAA 57.408 36.364 0.00 0.00 0.00 2.44
5887 12054 3.838244 TGTTCCATAGGTGCATAGACC 57.162 47.619 0.00 0.00 36.09 3.85
6006 12191 6.882610 TGATGCCATACAACCTATTTGATC 57.117 37.500 0.00 0.00 38.73 2.92
6007 12192 5.769662 TGATGCCATACAACCTATTTGATCC 59.230 40.000 0.00 0.00 38.73 3.36
6011 12196 7.526041 TGCCATACAACCTATTTGATCCTTAT 58.474 34.615 0.00 0.00 38.73 1.73
6066 12251 0.247814 GGTTCATTGCGATGCGACTG 60.248 55.000 9.26 0.00 33.14 3.51
6118 12303 0.863144 GCACGTACGTTTCATGGTGT 59.137 50.000 20.23 0.00 0.00 4.16
6136 12321 3.494048 GGTGTGAATTGAACCAAATGGCA 60.494 43.478 0.00 0.00 39.32 4.92
6188 12374 9.868277 TTATTATTGATTCCAACACCATTGTTC 57.132 29.630 0.00 0.00 44.57 3.18
6224 12410 7.920682 ACTTATTCCTTTTGTTCATTGTCACAC 59.079 33.333 0.00 0.00 0.00 3.82
6234 12420 2.038426 TCATTGTCACACGAGGTTCCAT 59.962 45.455 0.00 0.00 0.00 3.41
6235 12421 2.163818 TTGTCACACGAGGTTCCATC 57.836 50.000 0.00 0.00 0.00 3.51
6245 12431 4.093408 CACGAGGTTCCATCTGTATGTTTG 59.907 45.833 0.00 0.00 0.00 2.93
6265 12451 4.206477 TGAATGAGACTGTACATGGTGG 57.794 45.455 0.00 0.00 0.00 4.61
6276 12462 5.117406 TGTACATGGTGGCCAACATAATA 57.883 39.130 35.33 25.89 36.41 0.98
6277 12463 5.510430 TGTACATGGTGGCCAACATAATAA 58.490 37.500 35.33 18.73 36.41 1.40
6278 12464 6.132658 TGTACATGGTGGCCAACATAATAAT 58.867 36.000 35.33 19.77 36.41 1.28
6292 12478 9.434420 CCAACATAATAATTTTCCATGTGTGTT 57.566 29.630 0.00 0.00 30.55 3.32
6302 12488 8.592105 ATTTTCCATGTGTGTTCTTGTTTATG 57.408 30.769 0.00 0.00 0.00 1.90
6307 12493 5.906113 TGTGTGTTCTTGTTTATGTGGTT 57.094 34.783 0.00 0.00 0.00 3.67
6308 12494 7.421599 CATGTGTGTTCTTGTTTATGTGGTTA 58.578 34.615 0.00 0.00 0.00 2.85
6357 12543 6.102663 ACACTACTACAGAGAACATCATTGC 58.897 40.000 0.00 0.00 0.00 3.56
6362 12548 3.925379 ACAGAGAACATCATTGCGTACA 58.075 40.909 0.00 0.00 0.00 2.90
6363 12549 3.928992 ACAGAGAACATCATTGCGTACAG 59.071 43.478 0.00 0.00 0.00 2.74
6369 12556 4.419522 ACATCATTGCGTACAGGAAAAC 57.580 40.909 0.00 0.00 32.72 2.43
6374 12561 5.837437 TCATTGCGTACAGGAAAACATTTT 58.163 33.333 0.00 0.00 32.72 1.82
6379 12566 5.240623 TGCGTACAGGAAAACATTTTCTCAT 59.759 36.000 14.92 5.36 44.49 2.90
6380 12567 5.569059 GCGTACAGGAAAACATTTTCTCATG 59.431 40.000 14.92 13.28 44.49 3.07
6401 12588 8.753497 TCATGTATAGTTGTCTAGACAGTCAT 57.247 34.615 23.97 18.88 46.70 3.06
6403 12590 7.247929 TGTATAGTTGTCTAGACAGTCATCG 57.752 40.000 23.97 0.00 41.50 3.84
6406 12593 3.692101 AGTTGTCTAGACAGTCATCGGAG 59.308 47.826 23.97 0.00 42.94 4.63
6407 12594 3.351794 TGTCTAGACAGTCATCGGAGT 57.648 47.619 21.74 0.00 36.21 3.85
6418 12670 4.035091 CAGTCATCGGAGTTGTTTTCACAA 59.965 41.667 0.00 0.00 40.82 3.33
6425 12677 6.053005 TCGGAGTTGTTTTCACAATACTCTT 58.947 36.000 0.00 0.00 44.85 2.85
6435 12687 8.847196 GTTTTCACAATACTCTTTTTAGGACCT 58.153 33.333 0.00 0.00 0.00 3.85
6472 12726 2.669569 TGCCTCTCAAAGCACGCC 60.670 61.111 0.00 0.00 33.08 5.68
6487 12741 0.179018 ACGCCTTTTCCAAGCAGACT 60.179 50.000 0.00 0.00 0.00 3.24
6491 12745 2.301346 CCTTTTCCAAGCAGACTGTGT 58.699 47.619 3.99 0.00 0.00 3.72
6502 12756 2.544267 GCAGACTGTGTACAAGGTTCAC 59.456 50.000 3.99 0.00 35.05 3.18
6505 12759 4.816385 CAGACTGTGTACAAGGTTCACATT 59.184 41.667 8.85 4.42 41.46 2.71
6514 12768 9.691362 GTGTACAAGGTTCACATTTATTTTCAT 57.309 29.630 0.00 0.00 34.71 2.57
6549 12814 2.172717 ACTCAGGTTGTTGCTGGTAGTT 59.827 45.455 0.00 0.00 0.00 2.24
6578 13929 5.895534 ACTTCCATCAACATATTTGCTCCAT 59.104 36.000 0.00 0.00 0.00 3.41
6625 13976 0.250295 CTGGTTGGTTCCTCGCTTGA 60.250 55.000 0.00 0.00 0.00 3.02
6648 13999 1.078497 CATGGTTGTGAGGCGCCTA 60.078 57.895 32.97 12.15 0.00 3.93
6680 14031 3.249189 AGCATGGACGTGGGTGGT 61.249 61.111 0.00 0.00 0.00 4.16
6722 14073 1.134729 TGCATCTGCGCATCTAGAACA 60.135 47.619 12.24 4.96 45.83 3.18
6726 14077 3.038788 TCTGCGCATCTAGAACAACAA 57.961 42.857 12.24 0.00 0.00 2.83
6732 14083 4.554723 GCGCATCTAGAACAACAACAAAGT 60.555 41.667 0.30 0.00 0.00 2.66
6733 14084 5.333798 GCGCATCTAGAACAACAACAAAGTA 60.334 40.000 0.30 0.00 0.00 2.24
6734 14085 6.299604 CGCATCTAGAACAACAACAAAGTAG 58.700 40.000 0.00 0.00 0.00 2.57
6748 14099 4.207165 ACAAAGTAGTTGCAACCATGAGT 58.793 39.130 25.62 14.41 41.31 3.41
6749 14100 4.275936 ACAAAGTAGTTGCAACCATGAGTC 59.724 41.667 25.62 8.64 41.31 3.36
6750 14101 4.357918 AAGTAGTTGCAACCATGAGTCT 57.642 40.909 25.62 7.43 0.00 3.24
6762 14113 6.276847 CAACCATGAGTCTCTACTTATCCAC 58.723 44.000 0.65 0.00 35.56 4.02
6780 14131 2.507484 CACTGTTCAAGAATGGAGCCA 58.493 47.619 0.00 0.00 0.00 4.75
6781 14132 2.886523 CACTGTTCAAGAATGGAGCCAA 59.113 45.455 0.00 0.00 0.00 4.52
6784 14135 4.405358 ACTGTTCAAGAATGGAGCCAAAAA 59.595 37.500 0.00 0.00 0.00 1.94
6836 14187 0.614812 AAAATGAAGGGGGCATGCAC 59.385 50.000 21.36 17.47 0.00 4.57
6838 14189 0.544833 AATGAAGGGGGCATGCACAA 60.545 50.000 23.88 1.30 0.00 3.33
6854 14206 7.212274 GCATGCACAAGAATTAGGGATTAAAT 58.788 34.615 14.21 0.00 0.00 1.40
6945 14988 1.986210 GCCCTTTGCTGGCTCCATT 60.986 57.895 0.00 0.00 45.70 3.16
6959 15002 3.066760 GGCTCCATTATTGCCAGTGTTAC 59.933 47.826 0.00 0.00 45.46 2.50
7025 15068 4.866508 TCCTACAAATCTCAAGTCGTGT 57.133 40.909 0.00 0.00 0.00 4.49
7034 15079 1.149361 TCAAGTCGTGTTCACCGTGC 61.149 55.000 0.00 0.00 0.00 5.34
7112 15166 8.415553 TCCATAGTTCAGAAATAATTTGCATGG 58.584 33.333 0.00 0.00 0.00 3.66
7122 15176 0.457035 ATTTGCATGGATCGCACCAC 59.543 50.000 0.00 0.00 43.03 4.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
181 194 5.130975 TCCATTCCTGCAGATACTTGTACAT 59.869 40.000 17.39 0.00 0.00 2.29
190 203 0.250038 GCGCTCCATTCCTGCAGATA 60.250 55.000 17.39 2.24 0.00 1.98
278 291 2.202932 CCCTGAACATCGCCCTCG 60.203 66.667 0.00 0.00 0.00 4.63
304 317 1.238439 AACATGCGTTTCCTGGACTG 58.762 50.000 0.00 0.00 28.09 3.51
317 330 3.678072 TGCTAGAGACACGTTTAACATGC 59.322 43.478 0.00 0.00 0.00 4.06
348 1103 2.425312 CGAGAGACCACTGCTCAACTAT 59.575 50.000 0.00 0.00 34.85 2.12
357 1115 0.898320 AACCATCCGAGAGACCACTG 59.102 55.000 0.00 0.00 0.00 3.66
358 1116 1.645710 AAACCATCCGAGAGACCACT 58.354 50.000 0.00 0.00 0.00 4.00
359 1117 2.474410 AAAACCATCCGAGAGACCAC 57.526 50.000 0.00 0.00 0.00 4.16
411 1170 5.245301 CCACCTTACCGAGATATATTGGTGA 59.755 44.000 18.05 9.91 43.39 4.02
469 1228 0.025513 CGCGCATGTTTCTAGCTGTC 59.974 55.000 8.75 0.00 0.00 3.51
487 1246 2.031508 ACAAATTGGTGGCGAACTTACG 60.032 45.455 0.00 0.00 0.00 3.18
492 1251 1.268352 TGCTACAAATTGGTGGCGAAC 59.732 47.619 15.71 0.00 46.90 3.95
558 1419 6.375455 CACATTTGCATAACTTCTACTCCCTT 59.625 38.462 0.00 0.00 0.00 3.95
561 1422 5.066505 CCCACATTTGCATAACTTCTACTCC 59.933 44.000 0.00 0.00 0.00 3.85
584 1445 0.674534 AACCGTGACTCAGAGACACC 59.325 55.000 22.38 9.08 37.55 4.16
593 1454 3.372954 CCGATATCTTGAACCGTGACTC 58.627 50.000 0.34 0.00 0.00 3.36
597 1458 1.217882 GGCCGATATCTTGAACCGTG 58.782 55.000 0.34 0.00 0.00 4.94
599 1460 0.031585 TCGGCCGATATCTTGAACCG 59.968 55.000 27.28 6.76 40.47 4.44
601 1462 4.567159 GGAATATCGGCCGATATCTTGAAC 59.433 45.833 44.68 31.71 44.36 3.18
603 1464 4.386867 GGAATATCGGCCGATATCTTGA 57.613 45.455 44.68 29.27 44.36 3.02
613 1474 3.864003 GCTAGTTTATCGGAATATCGGCC 59.136 47.826 0.00 0.00 0.00 6.13
614 1475 3.864003 GGCTAGTTTATCGGAATATCGGC 59.136 47.826 0.00 0.00 0.00 5.54
615 1476 4.103357 CGGCTAGTTTATCGGAATATCGG 58.897 47.826 0.00 0.00 0.00 4.18
617 1478 7.829378 AAATCGGCTAGTTTATCGGAATATC 57.171 36.000 0.00 0.00 0.00 1.63
618 1479 9.530633 GATAAATCGGCTAGTTTATCGGAATAT 57.469 33.333 7.44 0.00 37.48 1.28
620 1481 7.829378 GATAAATCGGCTAGTTTATCGGAAT 57.171 36.000 7.44 0.00 37.48 3.01
640 1501 9.852481 CGATTTATTGGTCGATTTAAACGATAA 57.148 29.630 13.37 12.18 41.62 1.75
641 1502 8.489559 CCGATTTATTGGTCGATTTAAACGATA 58.510 33.333 13.37 6.26 41.62 2.92
643 1504 6.707711 CCGATTTATTGGTCGATTTAAACGA 58.292 36.000 8.24 8.24 40.11 3.85
644 1505 5.394322 GCCGATTTATTGGTCGATTTAAACG 59.606 40.000 0.00 0.00 40.11 3.60
645 1506 5.684184 GGCCGATTTATTGGTCGATTTAAAC 59.316 40.000 0.00 0.00 40.11 2.01
646 1507 5.823353 GGCCGATTTATTGGTCGATTTAAA 58.177 37.500 0.00 0.00 40.11 1.52
649 1510 3.982576 GGCCGATTTATTGGTCGATTT 57.017 42.857 0.00 0.00 40.11 2.17
655 1516 4.280436 TCATATCGGCCGATTTATTGGT 57.720 40.909 42.74 21.78 36.17 3.67
656 1517 4.935205 TCTTCATATCGGCCGATTTATTGG 59.065 41.667 42.74 26.77 36.17 3.16
657 1518 6.668541 ATCTTCATATCGGCCGATTTATTG 57.331 37.500 42.74 31.08 36.17 1.90
658 1519 8.786826 TTTATCTTCATATCGGCCGATTTATT 57.213 30.769 42.74 24.11 36.17 1.40
659 1520 8.964476 ATTTATCTTCATATCGGCCGATTTAT 57.036 30.769 42.74 29.04 36.17 1.40
660 1521 8.664798 CAATTTATCTTCATATCGGCCGATTTA 58.335 33.333 42.74 28.12 36.17 1.40
661 1522 7.174946 ACAATTTATCTTCATATCGGCCGATTT 59.825 33.333 42.74 32.90 36.17 2.17
663 1524 6.173339 ACAATTTATCTTCATATCGGCCGAT 58.827 36.000 39.97 39.97 38.54 4.18
665 1526 5.163854 GGACAATTTATCTTCATATCGGCCG 60.164 44.000 22.12 22.12 0.00 6.13
667 1528 6.801539 TGGACAATTTATCTTCATATCGGC 57.198 37.500 0.00 0.00 0.00 5.54
697 1558 9.341899 CAAAAATTTATTGGTCGACCTTCTTAG 57.658 33.333 33.39 9.93 36.82 2.18
698 1559 9.069082 TCAAAAATTTATTGGTCGACCTTCTTA 57.931 29.630 33.39 17.22 36.82 2.10
699 1560 7.947282 TCAAAAATTTATTGGTCGACCTTCTT 58.053 30.769 33.39 17.93 36.82 2.52
701 1562 9.849166 TTATCAAAAATTTATTGGTCGACCTTC 57.151 29.630 33.39 9.76 36.82 3.46
702 1563 9.855021 CTTATCAAAAATTTATTGGTCGACCTT 57.145 29.630 33.39 22.96 36.82 3.50
703 1564 7.973944 GCTTATCAAAAATTTATTGGTCGACCT 59.026 33.333 33.39 18.29 36.82 3.85
704 1565 7.044314 CGCTTATCAAAAATTTATTGGTCGACC 60.044 37.037 28.17 28.17 0.00 4.79
705 1566 7.044314 CCGCTTATCAAAAATTTATTGGTCGAC 60.044 37.037 7.13 7.13 0.00 4.20
706 1567 6.970043 CCGCTTATCAAAAATTTATTGGTCGA 59.030 34.615 10.94 0.00 0.00 4.20
707 1568 6.750039 ACCGCTTATCAAAAATTTATTGGTCG 59.250 34.615 10.94 6.30 0.00 4.79
708 1569 9.744468 ATACCGCTTATCAAAAATTTATTGGTC 57.256 29.630 10.94 0.00 0.00 4.02
732 1593 5.269991 ACAACTAGAGCAGTGTTAGGGATA 58.730 41.667 0.00 0.00 37.63 2.59
734 1595 3.507411 ACAACTAGAGCAGTGTTAGGGA 58.493 45.455 0.00 0.00 37.63 4.20
735 1596 3.963428 ACAACTAGAGCAGTGTTAGGG 57.037 47.619 0.00 0.00 37.63 3.53
736 1597 3.921021 CGAACAACTAGAGCAGTGTTAGG 59.079 47.826 0.00 0.00 37.63 2.69
738 1599 3.005472 AGCGAACAACTAGAGCAGTGTTA 59.995 43.478 0.00 0.00 37.63 2.41
739 1600 2.135933 GCGAACAACTAGAGCAGTGTT 58.864 47.619 0.00 0.00 37.63 3.32
741 1602 2.071688 AGCGAACAACTAGAGCAGTG 57.928 50.000 0.00 0.00 37.63 3.66
742 1603 3.936372 TTAGCGAACAACTAGAGCAGT 57.064 42.857 0.00 0.00 40.05 4.40
743 1604 4.677584 AGATTAGCGAACAACTAGAGCAG 58.322 43.478 0.00 0.00 0.00 4.24
745 1606 5.117897 GCATAGATTAGCGAACAACTAGAGC 59.882 44.000 0.00 0.00 0.00 4.09
747 1608 5.977725 GTGCATAGATTAGCGAACAACTAGA 59.022 40.000 0.00 0.00 0.00 2.43
748 1609 5.108217 CGTGCATAGATTAGCGAACAACTAG 60.108 44.000 0.00 0.00 0.00 2.57
749 1610 4.738252 CGTGCATAGATTAGCGAACAACTA 59.262 41.667 0.00 0.00 0.00 2.24
909 1775 4.715297 GTCTTCCTCCTACTTATGGTTCCA 59.285 45.833 0.00 0.00 0.00 3.53
1072 4401 1.420430 AGGGACTCTGACGGTTTCAA 58.580 50.000 0.00 0.00 32.21 2.69
1251 4883 0.820074 TAGCGAGGACAGCTAGAGGC 60.820 60.000 0.00 0.00 44.05 4.70
1317 4963 2.352715 GCAAGGGGTGTAGCAAAATCAC 60.353 50.000 0.00 0.00 0.00 3.06
1343 4991 4.447054 CACAGTGCAGAAAGAGTTAGTGAG 59.553 45.833 0.00 0.00 0.00 3.51
1431 5079 0.250295 TGGGTTCAAGTTCAGCTCCG 60.250 55.000 0.00 0.00 0.00 4.63
1551 5199 1.899814 AGAGTTGGAGCGTTCACCATA 59.100 47.619 0.53 0.00 36.02 2.74
1560 5208 0.730834 CGTGAGACAGAGTTGGAGCG 60.731 60.000 0.00 0.00 0.00 5.03
1726 6056 2.550606 TGGTGAATGCGTTGAAGTAACC 59.449 45.455 0.00 0.00 35.84 2.85
1734 6064 3.723764 GCGTATATTTGGTGAATGCGTTG 59.276 43.478 0.00 0.00 0.00 4.10
1743 6073 4.180817 TGTGAGTCAGCGTATATTTGGTG 58.819 43.478 0.00 0.95 35.01 4.17
1756 6086 6.466308 TTGATAACAACGAATGTGAGTCAG 57.534 37.500 0.00 0.00 42.99 3.51
1757 6087 6.073276 CCTTTGATAACAACGAATGTGAGTCA 60.073 38.462 0.00 0.00 42.99 3.41
1761 6091 6.434596 CAACCTTTGATAACAACGAATGTGA 58.565 36.000 0.00 0.00 42.99 3.58
1769 6099 4.944048 ACCAAGCAACCTTTGATAACAAC 58.056 39.130 0.00 0.00 35.63 3.32
1838 6228 5.676532 TTGTCGGTCAAATGTTTAACGAT 57.323 34.783 0.00 0.00 32.64 3.73
1971 6366 7.169982 CGCCCTTATATTTCTTTACAGAGAGTG 59.830 40.741 0.00 0.00 0.00 3.51
1972 6367 7.147707 ACGCCCTTATATTTCTTTACAGAGAGT 60.148 37.037 0.00 0.00 0.00 3.24
1973 6368 7.210873 ACGCCCTTATATTTCTTTACAGAGAG 58.789 38.462 0.00 0.00 0.00 3.20
1975 6370 7.787725 AACGCCCTTATATTTCTTTACAGAG 57.212 36.000 0.00 0.00 0.00 3.35
1977 6372 9.321562 TCTAAACGCCCTTATATTTCTTTACAG 57.678 33.333 0.00 0.00 0.00 2.74
1978 6373 9.841295 ATCTAAACGCCCTTATATTTCTTTACA 57.159 29.630 0.00 0.00 0.00 2.41
1981 6376 8.837389 GTGATCTAAACGCCCTTATATTTCTTT 58.163 33.333 0.00 0.00 0.00 2.52
1982 6377 8.211629 AGTGATCTAAACGCCCTTATATTTCTT 58.788 33.333 0.00 0.00 0.00 2.52
1983 6378 7.736893 AGTGATCTAAACGCCCTTATATTTCT 58.263 34.615 0.00 0.00 0.00 2.52
1984 6379 7.964604 AGTGATCTAAACGCCCTTATATTTC 57.035 36.000 0.00 0.00 0.00 2.17
1987 6382 7.778185 AGTAGTGATCTAAACGCCCTTATAT 57.222 36.000 0.00 0.00 0.00 0.86
1988 6383 7.592885 AAGTAGTGATCTAAACGCCCTTATA 57.407 36.000 0.00 0.00 0.00 0.98
1990 6385 5.927281 AAGTAGTGATCTAAACGCCCTTA 57.073 39.130 0.00 0.00 0.00 2.69
1991 6386 4.820894 AAGTAGTGATCTAAACGCCCTT 57.179 40.909 0.00 0.00 0.00 3.95
1993 6388 5.658468 ACTAAAGTAGTGATCTAAACGCCC 58.342 41.667 0.00 0.00 37.69 6.13
2080 6475 9.178758 GGTACTGTCTTCATTCCAAATTAATCT 57.821 33.333 0.00 0.00 0.00 2.40
2081 6476 8.122952 CGGTACTGTCTTCATTCCAAATTAATC 58.877 37.037 0.00 0.00 0.00 1.75
2082 6477 7.415206 GCGGTACTGTCTTCATTCCAAATTAAT 60.415 37.037 3.10 0.00 0.00 1.40
2083 6478 6.128117 GCGGTACTGTCTTCATTCCAAATTAA 60.128 38.462 3.10 0.00 0.00 1.40
2091 6486 2.674796 AGGCGGTACTGTCTTCATTC 57.325 50.000 2.00 0.00 0.00 2.67
2100 6495 9.106070 ACTTAATAATTCTAAAAGGCGGTACTG 57.894 33.333 0.00 0.00 0.00 2.74
2106 6501 8.827677 ACTAGCACTTAATAATTCTAAAAGGCG 58.172 33.333 0.00 0.00 0.00 5.52
2154 6585 4.782156 TGGAAAATCATTAGCCATGGGTTT 59.218 37.500 23.79 8.22 33.07 3.27
2169 6600 6.816140 TGGTTTCACTGTTTCTTTGGAAAATC 59.184 34.615 0.00 0.00 42.22 2.17
2180 6611 3.302415 GCGCAATTTGGTTTCACTGTTTC 60.302 43.478 0.30 0.00 0.00 2.78
2184 6615 1.850377 TGCGCAATTTGGTTTCACTG 58.150 45.000 8.16 0.00 0.00 3.66
2185 6616 2.801679 CAATGCGCAATTTGGTTTCACT 59.198 40.909 17.11 0.00 0.00 3.41
2186 6617 2.096318 CCAATGCGCAATTTGGTTTCAC 60.096 45.455 27.34 0.00 0.00 3.18
2187 6618 2.141517 CCAATGCGCAATTTGGTTTCA 58.858 42.857 27.34 0.00 0.00 2.69
2188 6619 1.136000 GCCAATGCGCAATTTGGTTTC 60.136 47.619 32.49 18.95 0.00 2.78
2191 6622 4.282399 GCCAATGCGCAATTTGGT 57.718 50.000 32.49 8.76 0.00 3.67
2299 6731 6.475727 CACTCGTAACAATAACATCCACCTAG 59.524 42.308 0.00 0.00 0.00 3.02
2419 6851 3.193479 GCAAGAGATTTCCAATCCGGTTT 59.807 43.478 0.00 0.00 35.57 3.27
2584 7016 1.597742 AGTCGCCACCATATGATTGC 58.402 50.000 3.65 0.00 0.00 3.56
2585 7017 3.935203 GGATAGTCGCCACCATATGATTG 59.065 47.826 3.65 0.71 0.00 2.67
2586 7018 3.055094 GGGATAGTCGCCACCATATGATT 60.055 47.826 3.65 0.00 0.00 2.57
2587 7019 2.501723 GGGATAGTCGCCACCATATGAT 59.498 50.000 3.65 0.00 0.00 2.45
2588 7020 1.899814 GGGATAGTCGCCACCATATGA 59.100 52.381 3.65 0.00 0.00 2.15
2590 7022 2.303022 CAAGGGATAGTCGCCACCATAT 59.697 50.000 0.00 0.00 0.00 1.78
2591 7023 1.691976 CAAGGGATAGTCGCCACCATA 59.308 52.381 0.00 0.00 0.00 2.74
2595 7053 0.249398 ACACAAGGGATAGTCGCCAC 59.751 55.000 0.00 0.00 0.00 5.01
2603 7061 2.642311 ACCATGACACACACAAGGGATA 59.358 45.455 0.00 0.00 0.00 2.59
2624 7082 3.326836 TCTATGTGCACCATCAACGAA 57.673 42.857 15.69 0.00 34.86 3.85
2627 7085 3.129113 TGCATTCTATGTGCACCATCAAC 59.871 43.478 15.69 0.00 46.76 3.18
2719 7185 3.000041 GTCATGCACTACCGTGAAATGA 59.000 45.455 0.00 2.64 43.97 2.57
2740 7206 0.740868 ACGATGACCATGAAGCACCG 60.741 55.000 0.00 0.00 0.00 4.94
2741 7207 0.729116 CACGATGACCATGAAGCACC 59.271 55.000 0.00 0.00 0.00 5.01
2877 7484 6.186420 AGTGACATGGGTTATGCATACATA 57.814 37.500 5.74 0.00 40.59 2.29
2912 7519 7.645340 CCATGTATTTGCTAGAAAGTTATGCAC 59.355 37.037 0.00 0.00 33.13 4.57
3111 7722 9.942850 TCATGAAGTAACAGAAATATGAAGACA 57.057 29.630 0.00 0.00 0.00 3.41
3147 7759 3.997021 GGTGTCCAGACATTCTACAGTTG 59.003 47.826 3.41 0.00 43.97 3.16
3244 7856 9.374838 AGAATCAAAGGTTTATGCAAAATCATC 57.625 29.630 0.00 0.00 0.00 2.92
3320 7952 5.163343 TGCTTACCCGAAACTAGCTAATCAT 60.163 40.000 0.00 0.00 33.15 2.45
3322 7954 4.690122 TGCTTACCCGAAACTAGCTAATC 58.310 43.478 0.00 0.00 33.15 1.75
3324 7956 3.512724 ACTGCTTACCCGAAACTAGCTAA 59.487 43.478 0.00 0.00 33.15 3.09
3335 7967 1.272490 TCTTGTCTCACTGCTTACCCG 59.728 52.381 0.00 0.00 0.00 5.28
3368 8000 3.286751 GCGGTTGCCAGAGTTGCA 61.287 61.111 0.00 0.00 36.84 4.08
3384 8017 2.094675 ACTGTGGAATAACATGGCAGC 58.905 47.619 0.00 0.00 0.00 5.25
3397 8030 5.654650 ACCTTGTTTTTGTGATAACTGTGGA 59.345 36.000 0.00 0.00 0.00 4.02
3402 8035 5.301805 CCCTCACCTTGTTTTTGTGATAACT 59.698 40.000 0.00 0.00 38.26 2.24
3417 8050 0.037303 CAGTCATGCACCCTCACCTT 59.963 55.000 0.00 0.00 0.00 3.50
3419 8052 1.377725 CCAGTCATGCACCCTCACC 60.378 63.158 0.00 0.00 0.00 4.02
3421 8054 1.841302 GACCCAGTCATGCACCCTCA 61.841 60.000 0.00 0.00 32.09 3.86
3425 8058 0.392998 ATTCGACCCAGTCATGCACC 60.393 55.000 0.00 0.00 32.09 5.01
3447 8080 0.399376 TGGGGTCACTACACACACCT 60.399 55.000 0.00 0.00 36.96 4.00
3448 8081 0.470766 TTGGGGTCACTACACACACC 59.529 55.000 0.00 0.00 36.51 4.16
3461 8094 4.904853 ACAATATGAACAAGGTTTTGGGGT 59.095 37.500 0.00 0.00 38.66 4.95
3468 8101 5.385198 ACACCTCACAATATGAACAAGGTT 58.615 37.500 0.00 0.00 36.69 3.50
3469 8102 4.985538 ACACCTCACAATATGAACAAGGT 58.014 39.130 0.00 0.00 36.69 3.50
3530 8164 3.054361 CACCCATGCTAGAACCTAAACCT 60.054 47.826 0.00 0.00 0.00 3.50
3557 8191 2.014033 TTGGGGTCTTGTGGGGGTTC 62.014 60.000 0.00 0.00 0.00 3.62
3576 8210 6.672593 TGCTCTTGAAAATGGGATTACCTAT 58.327 36.000 0.00 0.00 41.11 2.57
3598 8232 4.644103 AAATGTAGATGGTCTTGCATGC 57.356 40.909 11.82 11.82 0.00 4.06
3610 8244 5.527951 TGCGCTGAAAAACAAAATGTAGAT 58.472 33.333 9.73 0.00 0.00 1.98
3621 8255 1.070643 GGTTTGCATGCGCTGAAAAAC 60.071 47.619 14.09 15.61 34.04 2.43
3630 8264 0.244450 ATGTTGAGGGTTTGCATGCG 59.756 50.000 14.09 0.00 0.00 4.73
3669 8312 6.147164 CCTTGTGTGCTCTATTTTAGTCGAAA 59.853 38.462 0.00 0.00 0.00 3.46
3685 8328 5.106673 GGTGAAGTTATAGTTCCTTGTGTGC 60.107 44.000 0.00 0.00 0.00 4.57
3689 8332 5.045797 GGAGGGTGAAGTTATAGTTCCTTGT 60.046 44.000 0.00 0.00 0.00 3.16
3690 8333 5.045869 TGGAGGGTGAAGTTATAGTTCCTTG 60.046 44.000 0.00 0.00 0.00 3.61
3691 8334 5.098663 TGGAGGGTGAAGTTATAGTTCCTT 58.901 41.667 0.00 0.00 0.00 3.36
3726 8370 9.828039 GTGGTTACCTATTTAGTTAGTTATGCT 57.172 33.333 2.07 0.00 0.00 3.79
3727 8371 9.603921 TGTGGTTACCTATTTAGTTAGTTATGC 57.396 33.333 2.07 0.00 0.00 3.14
3743 8387 9.975218 AAAAGAAATATGATAGTGTGGTTACCT 57.025 29.630 2.07 0.00 0.00 3.08
3786 8550 4.728772 CCCTTCTCCCATGCATGTTTATA 58.271 43.478 24.58 6.87 0.00 0.98
3787 8551 3.569491 CCCTTCTCCCATGCATGTTTAT 58.431 45.455 24.58 0.00 0.00 1.40
3791 8555 1.076485 GCCCTTCTCCCATGCATGT 60.076 57.895 24.58 0.00 0.00 3.21
3834 8598 5.944599 ACTGCATGTTGAGATGAGATTTTCT 59.055 36.000 0.00 0.00 0.00 2.52
3835 8599 6.128090 TGACTGCATGTTGAGATGAGATTTTC 60.128 38.462 0.00 0.00 0.00 2.29
3854 8621 5.869753 AGTGTTTTCTCATACATGACTGC 57.130 39.130 0.00 0.00 32.50 4.40
3998 8765 3.939740 AGATGATACCTGGCATGTTGT 57.060 42.857 0.00 0.00 0.00 3.32
4004 8771 7.354312 TGCTATATACTAGATGATACCTGGCA 58.646 38.462 0.00 0.00 0.00 4.92
4063 8830 2.424956 GGGTCTTTCTCATGCATGGTTC 59.575 50.000 25.97 9.84 0.00 3.62
4117 8884 9.956640 AATAAAAGTGGCATAATCAAATGGAAA 57.043 25.926 0.00 0.00 0.00 3.13
4118 8885 9.598517 GAATAAAAGTGGCATAATCAAATGGAA 57.401 29.630 0.00 0.00 0.00 3.53
4197 8964 8.928270 ATTAATAACGTGAGGACTGAAACTAG 57.072 34.615 0.00 0.00 0.00 2.57
4198 8965 7.977853 GGATTAATAACGTGAGGACTGAAACTA 59.022 37.037 0.00 0.00 0.00 2.24
4208 8976 7.812648 TGAAGTTTTGGATTAATAACGTGAGG 58.187 34.615 0.00 0.00 0.00 3.86
4229 8997 9.258826 TGATATTTGGTTGTTTTGAACATGAAG 57.741 29.630 0.00 0.00 41.79 3.02
4259 9027 4.091509 GCGGGAACTAGTTGCGATATATTG 59.908 45.833 19.35 0.00 0.00 1.90
4267 9035 0.108992 TGTAGCGGGAACTAGTTGCG 60.109 55.000 19.35 15.41 0.00 4.85
4283 9051 7.643569 ACCAAATGATACAGAATGCATTGTA 57.356 32.000 18.59 14.96 42.53 2.41
4288 9056 6.587206 TCAAACCAAATGATACAGAATGCA 57.413 33.333 0.00 0.00 42.53 3.96
4293 9061 7.448161 AGTGTTCATCAAACCAAATGATACAGA 59.552 33.333 0.00 0.00 35.80 3.41
4294 9062 7.596494 AGTGTTCATCAAACCAAATGATACAG 58.404 34.615 0.00 0.00 35.80 2.74
4325 9093 2.035632 CCTTGTTGGCCCAAACACTTA 58.964 47.619 8.11 0.00 39.70 2.24
4354 9125 4.279420 GGAGAAGCACCTCTTTTGTGATTT 59.721 41.667 5.53 0.00 41.92 2.17
4382 9154 8.375506 ACTATAAAGATTGATTAAGCCGATGGA 58.624 33.333 0.00 0.00 0.00 3.41
4410 9182 3.053095 AGGATTCATGCTTCCTCAATGGT 60.053 43.478 9.73 0.00 37.89 3.55
4437 9209 8.632679 TCATTCAAGAATAGCAATTATTCCCAC 58.367 33.333 0.00 0.00 45.86 4.61
4488 9260 9.706691 CAATAAAGTAAGAGTCAAGTAACCAGA 57.293 33.333 0.00 0.00 0.00 3.86
4489 9261 9.490379 ACAATAAAGTAAGAGTCAAGTAACCAG 57.510 33.333 0.00 0.00 0.00 4.00
4495 9267 9.614792 AAAGACACAATAAAGTAAGAGTCAAGT 57.385 29.630 0.00 0.00 0.00 3.16
4563 9335 6.645003 GGCGAAGATTCAAACCAAGTAAAAAT 59.355 34.615 0.00 0.00 0.00 1.82
4569 9341 2.814336 GAGGCGAAGATTCAAACCAAGT 59.186 45.455 0.00 0.00 0.00 3.16
4572 9344 2.559698 TGAGGCGAAGATTCAAACCA 57.440 45.000 0.00 0.00 0.00 3.67
4642 9417 7.448469 GCAATATACAGGAATATTGTTCTGGGT 59.552 37.037 14.67 0.00 45.49 4.51
4643 9418 7.094205 GGCAATATACAGGAATATTGTTCTGGG 60.094 40.741 14.67 0.00 45.49 4.45
4671 9446 4.287720 CAATTGATCCATCAGTCAATGCG 58.712 43.478 0.00 0.00 42.52 4.73
4789 9564 6.849588 AAAATTTCAAGCATCTGAAACCAC 57.150 33.333 9.87 0.00 45.52 4.16
4791 9566 6.138088 GCAAAAATTTCAAGCATCTGAAACC 58.862 36.000 9.87 0.00 45.52 3.27
4798 9574 6.476243 ACATCTGCAAAAATTTCAAGCATC 57.524 33.333 11.11 0.00 34.35 3.91
4831 9609 6.349115 GGGTAGCATGAATAGCTTCATCATTG 60.349 42.308 0.00 0.00 46.83 2.82
4939 9717 5.288712 CGTGTTGATATAGACGGCATAATCC 59.711 44.000 0.00 0.00 0.00 3.01
5145 11130 9.515226 TCTATACAAACTCAAATGCCTAGTTTT 57.485 29.630 0.00 0.00 40.52 2.43
5165 11150 7.859377 TGTGCGTGCTAGTTTACTATTCTATAC 59.141 37.037 0.00 0.00 0.00 1.47
5187 11172 6.665474 TTATTGCAAATTTGATGGATGTGC 57.335 33.333 22.31 4.18 38.07 4.57
5214 11199 5.916318 TCATTTGTTCCTTCATGCACTTTT 58.084 33.333 0.00 0.00 0.00 2.27
5235 11220 8.204160 CCTACCAATGTATGTGTTCTAATCTCA 58.796 37.037 0.00 0.00 0.00 3.27
5253 11238 2.105134 TCACACAACCGTTCCTACCAAT 59.895 45.455 0.00 0.00 0.00 3.16
5261 11246 1.535462 CCCTGAATCACACAACCGTTC 59.465 52.381 0.00 0.00 0.00 3.95
5264 11249 0.874390 CACCCTGAATCACACAACCG 59.126 55.000 0.00 0.00 0.00 4.44
5266 11251 1.531149 CGACACCCTGAATCACACAAC 59.469 52.381 0.00 0.00 0.00 3.32
5268 11253 0.602638 GCGACACCCTGAATCACACA 60.603 55.000 0.00 0.00 0.00 3.72
5273 11258 1.401905 GATTTGGCGACACCCTGAATC 59.598 52.381 0.00 0.00 42.67 2.52
5279 11264 1.133025 CTCAATGATTTGGCGACACCC 59.867 52.381 0.00 0.00 42.67 4.61
5292 11277 9.338622 TCTACTACGATATCTTGAACTCAATGA 57.661 33.333 0.34 0.00 35.02 2.57
5302 11287 7.043325 GCCAACAACTTCTACTACGATATCTTG 60.043 40.741 0.34 0.00 0.00 3.02
5322 11307 0.388659 GTGCTCACATTTGGCCAACA 59.611 50.000 20.35 8.26 0.00 3.33
5328 11313 1.588082 GGCAGGTGCTCACATTTGG 59.412 57.895 1.26 0.00 41.70 3.28
5335 11320 0.621571 ATCTAAGGGGCAGGTGCTCA 60.622 55.000 3.82 0.00 45.20 4.26
5361 11346 1.613925 TGCTTGTCTCTAGAACTGCGT 59.386 47.619 0.00 0.00 0.00 5.24
5385 11370 1.139734 CGCACCGATAGCAGTGTCT 59.860 57.895 0.00 0.00 36.35 3.41
5387 11372 2.167398 AACCGCACCGATAGCAGTGT 62.167 55.000 0.00 0.00 36.35 3.55
5389 11374 1.153628 GAACCGCACCGATAGCAGT 60.154 57.895 0.00 0.00 0.00 4.40
5416 11401 2.936919 TGATGTGTTGCTCACTTCCT 57.063 45.000 18.00 3.41 45.03 3.36
5422 11407 3.295093 TCCCTTTTTGATGTGTTGCTCA 58.705 40.909 0.00 0.00 0.00 4.26
5449 11438 1.140052 CCCCGTGAATGCACCACTATA 59.860 52.381 16.14 0.00 42.09 1.31
5479 11468 2.885135 TAACCCTCACACGTCCTAGA 57.115 50.000 0.00 0.00 0.00 2.43
5490 11479 5.448654 CAATCCAATCCTGATTAACCCTCA 58.551 41.667 0.00 0.00 31.42 3.86
5503 11492 5.480422 GGTGGGATAATTACCAATCCAATCC 59.520 44.000 7.18 0.00 43.01 3.01
5504 11493 5.183140 CGGTGGGATAATTACCAATCCAATC 59.817 44.000 7.18 0.00 43.01 2.67
5518 11507 3.289407 TTGATTCATGCGGTGGGATAA 57.711 42.857 0.00 0.00 0.00 1.75
5521 11510 1.750206 CAATTGATTCATGCGGTGGGA 59.250 47.619 0.00 0.00 0.00 4.37
5527 11516 5.525199 TGATTGATCCAATTGATTCATGCG 58.475 37.500 7.12 0.00 33.90 4.73
5528 11517 7.962964 AATGATTGATCCAATTGATTCATGC 57.037 32.000 7.12 5.43 33.90 4.06
5530 11519 8.591072 GGGTAATGATTGATCCAATTGATTCAT 58.409 33.333 7.12 2.15 33.90 2.57
5540 11529 4.830717 AATGGGGGTAATGATTGATCCA 57.169 40.909 0.00 0.00 0.00 3.41
5578 11744 1.088340 CACTCATCTGCTTGCCTCGG 61.088 60.000 0.00 0.00 0.00 4.63
5589 11755 8.648698 ACTATAGTATGATTGCTCACTCATCT 57.351 34.615 2.75 6.67 33.55 2.90
5590 11756 7.973388 GGACTATAGTATGATTGCTCACTCATC 59.027 40.741 5.09 0.82 33.55 2.92
5591 11757 7.452813 TGGACTATAGTATGATTGCTCACTCAT 59.547 37.037 5.09 7.66 35.35 2.90
5603 11769 9.147732 ACATGAGAACATTGGACTATAGTATGA 57.852 33.333 17.29 3.31 34.15 2.15
5636 11802 7.823745 AATAATGGGTTCTTGCTTATACCTG 57.176 36.000 0.00 0.00 0.00 4.00
5673 11840 5.880332 CCCACATTGTGTGCTAGTAGTTAAT 59.120 40.000 15.34 0.00 46.51 1.40
5677 11844 2.903784 TCCCACATTGTGTGCTAGTAGT 59.096 45.455 15.34 0.00 46.51 2.73
5682 11849 3.868369 GCTTAGTCCCACATTGTGTGCTA 60.868 47.826 15.34 10.85 46.51 3.49
5684 11851 1.200020 GCTTAGTCCCACATTGTGTGC 59.800 52.381 15.34 5.42 46.51 4.57
5700 11867 2.999591 TGCATAGCATGTGCGAAGCTTA 61.000 45.455 14.42 0.00 45.43 3.09
5703 11870 1.723273 TGCATAGCATGTGCGAAGC 59.277 52.632 8.09 8.09 45.43 3.86
5708 11875 0.527113 TGTGGTTGCATAGCATGTGC 59.473 50.000 0.00 0.00 38.76 4.57
5743 11910 5.748630 TGTTACGCAATAATTTGTGCAAACA 59.251 32.000 17.73 17.73 45.30 2.83
5744 11911 6.204075 TGTTACGCAATAATTTGTGCAAAC 57.796 33.333 12.06 13.63 45.30 2.93
5752 11919 6.274157 TGGGACAATGTTACGCAATAATTT 57.726 33.333 0.00 0.00 31.92 1.82
5769 11936 6.548321 AGTTGGAACATATAGTTTTGGGACA 58.452 36.000 0.00 0.00 41.51 4.02
5843 12010 7.603024 ACATTTCAGTAACCAAAGTCTAGTAGC 59.397 37.037 0.00 0.00 0.00 3.58
5887 12054 1.203758 ACAATGCCTGACATGTGCATG 59.796 47.619 19.42 15.67 44.49 4.06
5928 12113 6.426025 TGCATAGACTCTAAAGCTGCAATATG 59.574 38.462 8.89 0.00 0.00 1.78
5932 12117 3.935203 GTGCATAGACTCTAAAGCTGCAA 59.065 43.478 11.85 0.00 0.00 4.08
6006 12191 9.888878 CTCAAGTGTCATATTGCAATAATAAGG 57.111 33.333 22.37 4.27 0.00 2.69
6007 12192 9.390795 GCTCAAGTGTCATATTGCAATAATAAG 57.609 33.333 22.37 12.75 0.00 1.73
6011 12196 7.395190 AAGCTCAAGTGTCATATTGCAATAA 57.605 32.000 22.37 4.99 0.00 1.40
6014 12199 5.710513 AAAGCTCAAGTGTCATATTGCAA 57.289 34.783 0.00 0.00 0.00 4.08
6027 12212 3.243975 ACCTGCATTTCCAAAAGCTCAAG 60.244 43.478 0.00 0.00 34.04 3.02
6066 12251 3.668656 GCAACAAGTAATGGAAAAGCGAC 59.331 43.478 0.00 0.00 0.00 5.19
6118 12303 5.224821 TCAATGCCATTTGGTTCAATTCA 57.775 34.783 0.00 0.00 37.57 2.57
6211 12397 2.223377 GGAACCTCGTGTGACAATGAAC 59.777 50.000 0.00 0.00 0.00 3.18
6224 12410 4.503910 TCAAACATACAGATGGAACCTCG 58.496 43.478 0.00 0.00 37.39 4.63
6234 12420 7.666623 TGTACAGTCTCATTCAAACATACAGA 58.333 34.615 0.00 0.00 0.00 3.41
6235 12421 7.889589 TGTACAGTCTCATTCAAACATACAG 57.110 36.000 0.00 0.00 0.00 2.74
6245 12431 2.939103 GCCACCATGTACAGTCTCATTC 59.061 50.000 0.33 0.00 0.00 2.67
6265 12451 7.548780 ACACACATGGAAAATTATTATGTTGGC 59.451 33.333 0.00 0.00 30.15 4.52
6276 12462 9.044150 CATAAACAAGAACACACATGGAAAATT 57.956 29.630 0.00 0.00 0.00 1.82
6277 12463 8.203485 ACATAAACAAGAACACACATGGAAAAT 58.797 29.630 0.00 0.00 0.00 1.82
6278 12464 7.490725 CACATAAACAAGAACACACATGGAAAA 59.509 33.333 0.00 0.00 0.00 2.29
6292 12478 9.214957 CAGTCAAGTATAACCACATAAACAAGA 57.785 33.333 0.00 0.00 0.00 3.02
6302 12488 8.784043 AGTCAAATTTCAGTCAAGTATAACCAC 58.216 33.333 0.00 0.00 0.00 4.16
6357 12543 6.668323 ACATGAGAAAATGTTTTCCTGTACG 58.332 36.000 13.10 2.86 45.84 3.67
6374 12561 8.047310 TGACTGTCTAGACAACTATACATGAGA 58.953 37.037 25.14 0.00 41.33 3.27
6379 12566 6.260271 CCGATGACTGTCTAGACAACTATACA 59.740 42.308 25.14 17.40 41.33 2.29
6380 12567 6.482641 TCCGATGACTGTCTAGACAACTATAC 59.517 42.308 25.14 14.00 41.33 1.47
6384 12571 3.687125 TCCGATGACTGTCTAGACAACT 58.313 45.455 25.14 13.87 41.33 3.16
6392 12579 3.753294 AAACAACTCCGATGACTGTCT 57.247 42.857 9.51 0.00 0.00 3.41
6401 12588 5.607477 AGAGTATTGTGAAAACAACTCCGA 58.393 37.500 6.95 0.00 31.89 4.55
6403 12590 8.926715 AAAAAGAGTATTGTGAAAACAACTCC 57.073 30.769 6.95 0.00 31.89 3.85
6451 12705 2.669569 TGCTTTGAGAGGCACGCC 60.670 61.111 0.00 0.00 33.23 5.68
6472 12726 3.876914 TGTACACAGTCTGCTTGGAAAAG 59.123 43.478 0.00 0.00 0.00 2.27
6487 12741 8.687242 TGAAAATAAATGTGAACCTTGTACACA 58.313 29.630 0.00 0.00 46.04 3.72
6549 12814 5.007626 GCAAATATGTTGATGGAAGTCGCTA 59.992 40.000 2.91 0.00 0.00 4.26
6593 13944 2.023673 CCAACCAGACAACAAGCTTCA 58.976 47.619 0.00 0.00 0.00 3.02
6595 13946 2.143876 ACCAACCAGACAACAAGCTT 57.856 45.000 0.00 0.00 0.00 3.74
6625 13976 1.672356 GCCTCACAACCATGACGCT 60.672 57.895 0.00 0.00 30.62 5.07
6631 13982 1.078426 GTAGGCGCCTCACAACCAT 60.078 57.895 36.73 8.54 0.00 3.55
6635 13986 0.037326 CAAGAGTAGGCGCCTCACAA 60.037 55.000 36.73 13.68 0.00 3.33
6648 13999 1.495579 ATGCTCTGGTGCCCAAGAGT 61.496 55.000 2.31 0.00 34.03 3.24
6661 14012 2.665000 CACCCACGTCCATGCTCT 59.335 61.111 0.00 0.00 0.00 4.09
6680 14031 1.194218 TCCATGCGAGAAGATGGTGA 58.806 50.000 0.00 0.00 40.21 4.02
6720 14071 4.021894 TGGTTGCAACTACTTTGTTGTTGT 60.022 37.500 27.64 0.00 45.64 3.32
6722 14073 4.792521 TGGTTGCAACTACTTTGTTGTT 57.207 36.364 27.64 0.00 46.33 2.83
6726 14077 4.207165 ACTCATGGTTGCAACTACTTTGT 58.793 39.130 27.64 15.89 37.54 2.83
6732 14083 4.772624 AGTAGAGACTCATGGTTGCAACTA 59.227 41.667 27.64 23.36 0.00 2.24
6733 14084 3.580458 AGTAGAGACTCATGGTTGCAACT 59.420 43.478 27.64 8.03 0.00 3.16
6734 14085 3.931578 AGTAGAGACTCATGGTTGCAAC 58.068 45.455 21.59 21.59 0.00 4.17
6739 14090 6.097554 CAGTGGATAAGTAGAGACTCATGGTT 59.902 42.308 5.02 0.00 33.58 3.67
6748 14099 7.776618 TTCTTGAACAGTGGATAAGTAGAGA 57.223 36.000 0.00 0.00 0.00 3.10
6749 14100 7.493971 CCATTCTTGAACAGTGGATAAGTAGAG 59.506 40.741 0.00 0.00 31.59 2.43
6750 14101 7.180229 TCCATTCTTGAACAGTGGATAAGTAGA 59.820 37.037 0.00 0.00 34.23 2.59
6762 14113 4.589216 TTTTGGCTCCATTCTTGAACAG 57.411 40.909 0.00 0.00 0.00 3.16
6784 14135 4.569440 CCATTGGCCCCCATTTAACAATTT 60.569 41.667 0.00 0.00 31.53 1.82
6789 14140 1.872773 TCCATTGGCCCCCATTTAAC 58.127 50.000 0.00 0.00 31.53 2.01
6820 14171 0.974010 CTTGTGCATGCCCCCTTCAT 60.974 55.000 16.68 0.00 0.00 2.57
6889 14931 4.278419 GCTCCCGCCTGATAAAAATGTATT 59.722 41.667 0.00 0.00 0.00 1.89
6893 14935 2.781945 GCTCCCGCCTGATAAAAATG 57.218 50.000 0.00 0.00 0.00 2.32
6917 14960 2.514824 CAAAGGGCGAGCTAGGGC 60.515 66.667 2.49 2.49 39.06 5.19
6945 14988 4.142708 CGCTTCAATGTAACACTGGCAATA 60.143 41.667 0.00 0.00 0.00 1.90
6959 15002 6.841443 AAGATCTAGACAATCGCTTCAATG 57.159 37.500 0.00 0.00 0.00 2.82
7002 15045 5.794894 ACACGACTTGAGATTTGTAGGAAT 58.205 37.500 0.00 0.00 0.00 3.01
7009 15052 3.362986 CGGTGAACACGACTTGAGATTTG 60.363 47.826 0.00 0.00 0.00 2.32
7020 15063 3.300852 TTTATAGCACGGTGAACACGA 57.699 42.857 13.29 0.00 34.93 4.35
7021 15064 4.391358 CTTTTTATAGCACGGTGAACACG 58.609 43.478 13.29 0.00 37.36 4.49
7025 15068 4.391155 ACACCTTTTTATAGCACGGTGAA 58.609 39.130 13.29 0.00 43.39 3.18
7104 15158 0.608856 AGTGGTGCGATCCATGCAAA 60.609 50.000 0.00 0.00 45.23 3.68


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.