AutoCloner

Multiple sequence alignment - TraesCS5B01G383000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)

BLAST Results

Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

	qseqid	sseqid	percentage.identical	alignment.length	no.mismatch	no.gap.openings	qstart	qend	sstart	send	evalue	bitscore
0	TraesCS5B01G383000	chr5B	100.000	3180	0	0	1	3180	561714660	561711481	0.000000e+00	5873
1	TraesCS5B01G383000	chr5B	92.651	1388	66	12	855	2207	561693782	561692396	0.000000e+00	1965
2	TraesCS5B01G383000	chr5B	94.872	468	20	4	2713	3180	702437787	702438250	0.000000e+00	728
3	TraesCS5B01G383000	chr5B	93.952	463	22	6	2719	3180	355243950	355243493	0.000000e+00	695
4	TraesCS5B01G383000	chr5B	90.217	368	20	7	2356	2708	705092532	705092166	1.730000e-127	466
5	TraesCS5B01G383000	chr5B	94.118	221	12	1	2	222	510719181	510719400	5.080000e-88	335
6	TraesCS5B01G383000	chr5B	93.304	224	15	0	1	224	461608928	461609151	6.570000e-87	331
7	TraesCS5B01G383000	chr5B	94.079	152	9	0	656	807	50280299	50280148	6.860000e-57	231
8	TraesCS5B01G383000	chr5B	94.079	152	8	1	656	806	576229590	576229439	2.470000e-56	230
9	TraesCS5B01G383000	chr5D	90.179	1568	90	25	852	2356	458459792	458458226	0.000000e+00	1984
10	TraesCS5B01G383000	chr5D	89.218	473	20	10	845	1287	458483382	458482911	2.140000e-156	562
11	TraesCS5B01G383000	chr5D	86.196	326	17	13	2074	2377	458457463	458457144	8.510000e-86	327
12	TraesCS5B01G383000	chr5D	100.000	40	0	0	812	851	458483448	458483409	1.220000e-09	75
13	TraesCS5B01G383000	chr3A	84.925	1340	144	33	888	2189	478665457	478666776	0.000000e+00	1303
14	TraesCS5B01G383000	chr3D	85.703	1224	127	24	996	2189	359092220	359093425	0.000000e+00	1247
15	TraesCS5B01G383000	chr7A	88.810	840	72	17	2357	3180	697103166	697103999	0.000000e+00	1011
16	TraesCS5B01G383000	chr7A	86.079	862	78	26	2357	3180	210818989	210819846	0.000000e+00	889
17	TraesCS5B01G383000	chr7A	88.443	424	32	10	2357	2772	734124059	734124473	2.200000e-136	496
18	TraesCS5B01G383000	chr7A	87.366	372	40	7	2357	2724	633396827	633397195	1.360000e-113	420
19	TraesCS5B01G383000	chr7A	92.763	152	11	0	656	807	22373561	22373712	1.480000e-53	220
20	TraesCS5B01G383000	chr3B	85.747	870	75	28	2357	3180	812791053	812791919	0.000000e+00	874
21	TraesCS5B01G383000	chr3B	94.612	464	20	5	2718	3180	44252090	44251631	0.000000e+00	713
22	TraesCS5B01G383000	chr3B	89.564	527	47	6	1686	2208	465069299	465069821	0.000000e+00	662
23	TraesCS5B01G383000	chr3B	86.284	401	35	16	2357	2750	820313804	820313417	4.910000e-113	418
24	TraesCS5B01G383000	chr3B	92.920	226	15	1	1	225	11218065	11217840	8.510000e-86	327
25	TraesCS5B01G383000	chr3B	92.793	222	16	0	1	222	90979564	90979343	3.960000e-84	322
26	TraesCS5B01G383000	chr3B	87.324	284	32	2	996	1279	465068598	465068877	3.960000e-84	322
27	TraesCS5B01G383000	chr3B	96.000	150	6	0	656	805	24271437	24271288	8.810000e-61	244
28	TraesCS5B01G383000	chr3B	95.395	152	6	1	656	806	66177791	66177942	1.140000e-59	241
29	TraesCS5B01G383000	chr7B	94.883	469	18	6	2713	3180	720546960	720546497	0.000000e+00	728
30	TraesCS5B01G383000	chr7B	90.758	541	35	14	2646	3180	726319118	726318587	0.000000e+00	708
31	TraesCS5B01G383000	chr7B	86.685	368	40	7	2357	2724	658135995	658136353	1.780000e-107	399
32	TraesCS5B01G383000	chr7B	93.750	224	14	0	1	224	742337088	742336865	1.410000e-88	337
33	TraesCS5B01G383000	chr7B	95.238	168	3	5	656	820	184229360	184229525	8.750000e-66	261
34	TraesCS5B01G383000	chr7B	92.763	152	11	0	656	807	504951560	504951711	1.480000e-53	220
35	TraesCS5B01G383000	chr4B	89.212	584	45	17	2603	3180	497164424	497164995	0.000000e+00	713
36	TraesCS5B01G383000	chr4B	92.769	484	28	7	2698	3180	40527688	40528165	0.000000e+00	693
37	TraesCS5B01G383000	chr1B	92.769	484	29	6	2698	3180	641188957	641189435	0.000000e+00	695
38	TraesCS5B01G383000	chr1B	86.730	422	36	17	2359	2772	645319387	645318978	4.840000e-123	451
39	TraesCS5B01G383000	chr5A	91.296	494	24	4	812	1287	576340670	576340178	0.000000e+00	656
40	TraesCS5B01G383000	chr2B	77.956	812	148	29	1380	2178	53520448	53519655	2.220000e-131	479
41	TraesCS5B01G383000	chr2A	88.743	382	22	16	2357	2734	12351615	12351251	6.260000e-122	448
42	TraesCS5B01G383000	chr2D	77.381	756	141	23	1426	2168	32595319	32594581	3.790000e-114	422
43	TraesCS5B01G383000	chr6B	92.793	222	15	1	1	222	680534928	680535148	1.420000e-83	320
44	TraesCS5B01G383000	chr6B	94.079	152	8	1	656	806	665534576	665534727	2.470000e-56	230
45	TraesCS5B01G383000	chr4A	92.377	223	16	1	1	222	673023921	673024143	1.840000e-82	316
46	TraesCS5B01G383000	chr4A	91.266	229	18	2	1	229	725325482	725325256	8.570000e-81	311
47	TraesCS5B01G383000	chr4A	93.421	152	9	1	656	806	511238240	511238391	1.150000e-54	224
48	TraesCS5B01G383000	chr1D	91.667	228	18	1	1	228	464850457	464850231	6.620000e-82	315

These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

	query	scaffold	start	end	length	rev.comp	avg.bitscore	max.bitscore	avg.percent.identical	query.start	query.end	num_hsp	groupid	homo_length
0	TraesCS5B01G383000	chr5B	561711481	561714660	3179	True	5873.0	5873	100.0000	1	3180	1	chr5B.!!$R4	3179
1	TraesCS5B01G383000	chr5B	561692396	561693782	1386	True	1965.0	1965	92.6510	855	2207	1	chr5B.!!$R3	1352
2	TraesCS5B01G383000	chr5D	458457144	458459792	2648	True	1155.5	1984	88.1875	852	2377	2	chr5D.!!$R1	1525
3	TraesCS5B01G383000	chr5D	458482911	458483448	537	True	318.5	562	94.6090	812	1287	2	chr5D.!!$R2	475
4	TraesCS5B01G383000	chr3A	478665457	478666776	1319	False	1303.0	1303	84.9250	888	2189	1	chr3A.!!$F1	1301
5	TraesCS5B01G383000	chr3D	359092220	359093425	1205	False	1247.0	1247	85.7030	996	2189	1	chr3D.!!$F1	1193
6	TraesCS5B01G383000	chr7A	697103166	697103999	833	False	1011.0	1011	88.8100	2357	3180	1	chr7A.!!$F4	823
7	TraesCS5B01G383000	chr7A	210818989	210819846	857	False	889.0	889	86.0790	2357	3180	1	chr7A.!!$F2	823
8	TraesCS5B01G383000	chr3B	812791053	812791919	866	False	874.0	874	85.7470	2357	3180	1	chr3B.!!$F2	823
9	TraesCS5B01G383000	chr3B	465068598	465069821	1223	False	492.0	662	88.4440	996	2208	2	chr3B.!!$F3	1212
10	TraesCS5B01G383000	chr7B	726318587	726319118	531	True	708.0	708	90.7580	2646	3180	1	chr7B.!!$R2	534
11	TraesCS5B01G383000	chr4B	497164424	497164995	571	False	713.0	713	89.2120	2603	3180	1	chr4B.!!$F2	577
12	TraesCS5B01G383000	chr2B	53519655	53520448	793	True	479.0	479	77.9560	1380	2178	1	chr2B.!!$R1	798
13	TraesCS5B01G383000	chr2D	32594581	32595319	738	True	422.0	422	77.3810	1426	2168	1	chr2D.!!$R1	742

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
552	553	0.030603	AAAAAGGGCCCAAGGTTCCA	60.031	50.0	27.56	0.0	0.0	3.53	F

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability	Orientation
2328	3553	0.179094	ACGTTGCAGGAAGTCGTGAA	60.179	50.0	5.22	0.0	33.92	3.18	R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
40	41	3.988459	GCTTTCGCGCCATAAAAGA	57.012	47.368	18.18	0.00	32.89	2.52
41	42	2.475200	GCTTTCGCGCCATAAAAGAT	57.525	45.000	18.18	0.00	32.89	2.40
42	43	2.797491	GCTTTCGCGCCATAAAAGATT	58.203	42.857	18.18	0.00	32.89	2.40
43	44	2.783832	GCTTTCGCGCCATAAAAGATTC	59.216	45.455	18.18	0.92	32.89	2.52
44	45	2.730183	TTCGCGCCATAAAAGATTCG	57.270	45.000	0.00	0.00	0.00	3.34
45	46	0.303493	TCGCGCCATAAAAGATTCGC	59.697	50.000	0.00	0.00	39.26	4.70
46	47	0.657368	CGCGCCATAAAAGATTCGCC	60.657	55.000	0.00	0.00	39.45	5.54
47	48	0.317854	GCGCCATAAAAGATTCGCCC	60.318	55.000	0.00	0.00	37.02	6.13
48	49	0.041312	CGCCATAAAAGATTCGCCCG	60.041	55.000	0.00	0.00	0.00	6.13
49	50	1.305201	GCCATAAAAGATTCGCCCGA	58.695	50.000	0.00	0.00	0.00	5.14
50	51	1.002792	GCCATAAAAGATTCGCCCGAC	60.003	52.381	0.00	0.00	0.00	4.79
51	52	1.260561	CCATAAAAGATTCGCCCGACG	59.739	52.381	0.00	0.00	45.62	5.12
52	53	0.935196	ATAAAAGATTCGCCCGACGC	59.065	50.000	0.00	0.00	43.23	5.19
53	54	1.085501	TAAAAGATTCGCCCGACGCC	61.086	55.000	0.00	0.00	43.23	5.68
54	55	4.832608	AAGATTCGCCCGACGCCC	62.833	66.667	0.00	0.00	43.23	6.13
69	70	4.702274	CCCCCAAGCAACCCCCAG	62.702	72.222	0.00	0.00	0.00	4.45
92	93	4.710167	CGGGTTCGGGTTGGGTCC	62.710	72.222	0.00	0.00	0.00	4.46
106	107	3.428282	GTCCGCCGACGCCAATTT	61.428	61.111	0.00	0.00	38.22	1.82
107	108	3.122323	TCCGCCGACGCCAATTTC	61.122	61.111	0.00	0.00	38.22	2.17
108	109	4.514569	CCGCCGACGCCAATTTCG	62.515	66.667	0.00	0.00	38.22	3.46
112	113	2.782615	CGACGCCAATTTCGGTCC	59.217	61.111	2.48	0.00	0.00	4.46
113	114	2.782615	GACGCCAATTTCGGTCCG	59.217	61.111	4.39	4.39	0.00	4.79
114	115	1.738830	GACGCCAATTTCGGTCCGA	60.739	57.895	10.71	10.71	0.00	4.55
115	116	1.693083	GACGCCAATTTCGGTCCGAG	61.693	60.000	14.79	3.47	37.14	4.63
116	117	2.791927	GCCAATTTCGGTCCGAGC	59.208	61.111	14.79	10.35	37.14	5.03
117	118	2.761195	GCCAATTTCGGTCCGAGCC	61.761	63.158	14.79	0.00	37.14	4.70
128	129	2.100216	CCGAGCCGGCGAAAAATG	59.900	61.111	23.20	6.69	41.17	2.32
129	130	2.100216	CGAGCCGGCGAAAAATGG	59.900	61.111	23.20	0.00	0.00	3.16
130	131	2.489751	GAGCCGGCGAAAAATGGG	59.510	61.111	23.20	0.00	0.00	4.00
131	132	3.699955	GAGCCGGCGAAAAATGGGC	62.700	63.158	23.20	0.00	44.07	5.36
132	133	4.812476	GCCGGCGAAAAATGGGCC	62.812	66.667	12.58	0.00	43.42	5.80
133	134	4.141965	CCGGCGAAAAATGGGCCC	62.142	66.667	17.59	17.59	43.99	5.80
134	135	4.141965	CGGCGAAAAATGGGCCCC	62.142	66.667	22.27	0.23	43.99	5.80
135	136	2.683572	GGCGAAAAATGGGCCCCT	60.684	61.111	22.27	6.51	41.01	4.79
136	137	2.578664	GCGAAAAATGGGCCCCTG	59.421	61.111	22.27	1.68	0.00	4.45
137	138	3.017771	GCGAAAAATGGGCCCCTGG	62.018	63.158	22.27	2.26	0.00	4.45
138	139	2.358372	CGAAAAATGGGCCCCTGGG	61.358	63.158	22.27	5.50	38.57	4.45
155	156	4.148825	GGACGCGACTGGGCTGAT	62.149	66.667	15.93	0.00	0.00	2.90
156	157	2.125512	GACGCGACTGGGCTGATT	60.126	61.111	15.93	0.00	0.00	2.57
157	158	1.741770	GACGCGACTGGGCTGATTT	60.742	57.895	15.93	0.00	0.00	2.17
158	159	1.298859	GACGCGACTGGGCTGATTTT	61.299	55.000	15.93	0.00	0.00	1.82
159	160	0.889186	ACGCGACTGGGCTGATTTTT	60.889	50.000	15.93	0.00	0.00	1.94
184	185	3.250986	GGCGACCGAAAAGTCACC	58.749	61.111	0.00	0.00	36.52	4.02
185	186	1.301479	GGCGACCGAAAAGTCACCT	60.301	57.895	0.00	0.00	36.28	4.00
186	187	1.566018	GGCGACCGAAAAGTCACCTG	61.566	60.000	0.00	0.00	36.28	4.00
187	188	1.566018	GCGACCGAAAAGTCACCTGG	61.566	60.000	0.00	0.00	36.52	4.45
188	189	0.949105	CGACCGAAAAGTCACCTGGG	60.949	60.000	0.00	0.00	36.52	4.45
189	190	0.605589	GACCGAAAAGTCACCTGGGG	60.606	60.000	0.00	0.00	36.73	4.96
190	191	1.303317	CCGAAAAGTCACCTGGGGG	60.303	63.158	0.00	0.00	38.88	5.40
221	222	4.218578	CGCGGCTGGAGATGCTCT	62.219	66.667	0.00	0.00	0.00	4.09
222	223	2.188994	GCGGCTGGAGATGCTCTT	59.811	61.111	0.00	0.00	0.00	2.85
223	224	1.443407	GCGGCTGGAGATGCTCTTA	59.557	57.895	0.00	0.00	0.00	2.10
224	225	0.599728	GCGGCTGGAGATGCTCTTAG	60.600	60.000	0.00	0.00	0.00	2.18
225	226	0.033228	CGGCTGGAGATGCTCTTAGG	59.967	60.000	0.00	0.00	0.00	2.69
226	227	1.418334	GGCTGGAGATGCTCTTAGGA	58.582	55.000	0.00	0.00	0.00	2.94
227	228	1.977129	GGCTGGAGATGCTCTTAGGAT	59.023	52.381	0.00	0.00	0.00	3.24
228	229	2.371510	GGCTGGAGATGCTCTTAGGATT	59.628	50.000	0.00	0.00	0.00	3.01
229	230	3.181446	GGCTGGAGATGCTCTTAGGATTT	60.181	47.826	0.00	0.00	0.00	2.17
230	231	4.040952	GGCTGGAGATGCTCTTAGGATTTA	59.959	45.833	0.00	0.00	0.00	1.40
231	232	5.237048	GCTGGAGATGCTCTTAGGATTTAG	58.763	45.833	0.00	0.00	0.00	1.85
232	233	5.221621	GCTGGAGATGCTCTTAGGATTTAGT	60.222	44.000	0.00	0.00	0.00	2.24
233	234	6.166984	TGGAGATGCTCTTAGGATTTAGTG	57.833	41.667	0.00	0.00	0.00	2.74
234	235	5.663106	TGGAGATGCTCTTAGGATTTAGTGT	59.337	40.000	0.00	0.00	0.00	3.55
235	236	6.156949	TGGAGATGCTCTTAGGATTTAGTGTT	59.843	38.462	0.00	0.00	0.00	3.32
236	237	7.051000	GGAGATGCTCTTAGGATTTAGTGTTT	58.949	38.462	0.00	0.00	0.00	2.83
237	238	7.011857	GGAGATGCTCTTAGGATTTAGTGTTTG	59.988	40.741	0.00	0.00	0.00	2.93
238	239	7.624549	AGATGCTCTTAGGATTTAGTGTTTGA	58.375	34.615	0.00	0.00	0.00	2.69
239	240	7.768120	AGATGCTCTTAGGATTTAGTGTTTGAG	59.232	37.037	0.00	0.00	0.00	3.02
240	241	6.769512	TGCTCTTAGGATTTAGTGTTTGAGT	58.230	36.000	0.00	0.00	0.00	3.41
241	242	6.650807	TGCTCTTAGGATTTAGTGTTTGAGTG	59.349	38.462	0.00	0.00	0.00	3.51
242	243	6.092807	GCTCTTAGGATTTAGTGTTTGAGTGG	59.907	42.308	0.00	0.00	0.00	4.00
243	244	7.311092	TCTTAGGATTTAGTGTTTGAGTGGA	57.689	36.000	0.00	0.00	0.00	4.02
244	245	7.918076	TCTTAGGATTTAGTGTTTGAGTGGAT	58.082	34.615	0.00	0.00	0.00	3.41
245	246	8.041323	TCTTAGGATTTAGTGTTTGAGTGGATC	58.959	37.037	0.00	0.00	0.00	3.36
246	247	6.380079	AGGATTTAGTGTTTGAGTGGATCT	57.620	37.500	0.00	0.00	0.00	2.75
247	248	6.176183	AGGATTTAGTGTTTGAGTGGATCTG	58.824	40.000	0.00	0.00	0.00	2.90
248	249	5.355350	GGATTTAGTGTTTGAGTGGATCTGG	59.645	44.000	0.00	0.00	0.00	3.86
249	250	2.191128	AGTGTTTGAGTGGATCTGGC	57.809	50.000	0.00	0.00	0.00	4.85
250	251	1.421268	AGTGTTTGAGTGGATCTGGCA	59.579	47.619	0.00	0.00	0.00	4.92
251	252	2.158623	AGTGTTTGAGTGGATCTGGCAA	60.159	45.455	0.00	0.00	0.00	4.52
252	253	2.030805	GTGTTTGAGTGGATCTGGCAAC	60.031	50.000	0.00	0.00	0.00	4.17
268	269	3.456280	GGCAACAATGACATTTGTGTGT	58.544	40.909	0.00	0.00	39.68	3.72
269	270	3.490526	GGCAACAATGACATTTGTGTGTC	59.509	43.478	0.00	0.30	46.75	3.67
270	271	3.490526	GCAACAATGACATTTGTGTGTCC	59.509	43.478	0.00	0.00	46.17	4.02
271	272	4.737352	GCAACAATGACATTTGTGTGTCCT	60.737	41.667	0.00	0.00	46.17	3.85
272	273	5.350633	CAACAATGACATTTGTGTGTCCTT	58.649	37.500	0.00	0.00	46.17	3.36
273	274	5.186996	ACAATGACATTTGTGTGTCCTTC	57.813	39.130	0.00	0.00	46.17	3.46
274	275	4.889409	ACAATGACATTTGTGTGTCCTTCT	59.111	37.500	0.00	0.00	46.17	2.85
275	276	5.217393	CAATGACATTTGTGTGTCCTTCTG	58.783	41.667	0.00	0.00	46.17	3.02
276	277	4.149511	TGACATTTGTGTGTCCTTCTGA	57.850	40.909	4.75	0.00	46.17	3.27
277	278	4.522114	TGACATTTGTGTGTCCTTCTGAA	58.478	39.130	4.75	0.00	46.17	3.02
278	279	5.132502	TGACATTTGTGTGTCCTTCTGAAT	58.867	37.500	4.75	0.00	46.17	2.57
279	280	5.008911	TGACATTTGTGTGTCCTTCTGAATG	59.991	40.000	4.75	0.00	46.17	2.67
280	281	3.988379	TTTGTGTGTCCTTCTGAATGC	57.012	42.857	0.00	0.00	0.00	3.56
281	282	1.511850	TGTGTGTCCTTCTGAATGCG	58.488	50.000	0.00	0.00	0.00	4.73
282	283	1.202639	TGTGTGTCCTTCTGAATGCGT	60.203	47.619	0.00	0.00	0.00	5.24
283	284	1.873591	GTGTGTCCTTCTGAATGCGTT	59.126	47.619	0.00	0.00	0.00	4.84
284	285	1.872952	TGTGTCCTTCTGAATGCGTTG	59.127	47.619	0.00	0.00	0.00	4.10
285	286	0.874390	TGTCCTTCTGAATGCGTTGC	59.126	50.000	0.00	0.00	0.00	4.17
286	287	1.160137	GTCCTTCTGAATGCGTTGCT	58.840	50.000	0.00	0.00	0.00	3.91
287	288	1.537202	GTCCTTCTGAATGCGTTGCTT	59.463	47.619	0.00	0.00	0.00	3.91
288	289	2.030805	GTCCTTCTGAATGCGTTGCTTT	60.031	45.455	0.00	0.00	0.00	3.51
289	290	2.622942	TCCTTCTGAATGCGTTGCTTTT	59.377	40.909	0.00	0.00	0.00	2.27
290	291	2.727798	CCTTCTGAATGCGTTGCTTTTG	59.272	45.455	0.00	0.00	0.00	2.44
291	292	3.550639	CCTTCTGAATGCGTTGCTTTTGA	60.551	43.478	0.00	0.00	0.00	2.69
292	293	3.706802	TCTGAATGCGTTGCTTTTGAA	57.293	38.095	0.00	0.00	0.00	2.69
293	294	3.631144	TCTGAATGCGTTGCTTTTGAAG	58.369	40.909	0.00	0.00	0.00	3.02
294	295	3.314913	TCTGAATGCGTTGCTTTTGAAGA	59.685	39.130	0.00	0.00	0.00	2.87
295	296	4.039151	TGAATGCGTTGCTTTTGAAGAA	57.961	36.364	0.00	0.00	0.00	2.52
296	297	3.796178	TGAATGCGTTGCTTTTGAAGAAC	59.204	39.130	0.00	0.00	0.00	3.01
297	298	3.715628	ATGCGTTGCTTTTGAAGAACT	57.284	38.095	0.00	0.00	0.00	3.01
298	299	3.502191	TGCGTTGCTTTTGAAGAACTT	57.498	38.095	0.00	0.00	0.00	2.66
299	300	3.843999	TGCGTTGCTTTTGAAGAACTTT	58.156	36.364	0.00	0.00	0.00	2.66
300	301	3.857093	TGCGTTGCTTTTGAAGAACTTTC	59.143	39.130	0.00	0.00	0.00	2.62
301	302	4.105486	GCGTTGCTTTTGAAGAACTTTCT	58.895	39.130	0.00	0.00	39.74	2.52
302	303	4.205181	GCGTTGCTTTTGAAGAACTTTCTC	59.795	41.667	0.00	0.00	36.28	2.87
303	304	4.434588	CGTTGCTTTTGAAGAACTTTCTCG	59.565	41.667	0.00	0.00	36.28	4.04
304	305	5.332707	GTTGCTTTTGAAGAACTTTCTCGT	58.667	37.500	0.00	0.00	36.28	4.18
305	306	6.483687	GTTGCTTTTGAAGAACTTTCTCGTA	58.516	36.000	0.00	0.00	36.28	3.43
306	307	6.287107	TGCTTTTGAAGAACTTTCTCGTAG	57.713	37.500	0.00	0.00	36.28	3.51
307	308	5.140872	GCTTTTGAAGAACTTTCTCGTAGC	58.859	41.667	0.00	0.00	36.28	3.58
308	309	5.668558	TTTTGAAGAACTTTCTCGTAGCC	57.331	39.130	0.00	0.00	36.28	3.93
309	310	4.602340	TTGAAGAACTTTCTCGTAGCCT	57.398	40.909	0.00	0.00	36.28	4.58
310	311	3.914312	TGAAGAACTTTCTCGTAGCCTG	58.086	45.455	0.00	0.00	36.28	4.85
311	312	3.321111	TGAAGAACTTTCTCGTAGCCTGT	59.679	43.478	0.00	0.00	36.28	4.00
312	313	3.305398	AGAACTTTCTCGTAGCCTGTG	57.695	47.619	0.00	0.00	29.94	3.66
313	314	2.628657	AGAACTTTCTCGTAGCCTGTGT	59.371	45.455	0.00	0.00	29.94	3.72
314	315	2.440539	ACTTTCTCGTAGCCTGTGTG	57.559	50.000	0.00	0.00	0.00	3.82
315	316	1.687123	ACTTTCTCGTAGCCTGTGTGT	59.313	47.619	0.00	0.00	0.00	3.72
316	317	2.102588	ACTTTCTCGTAGCCTGTGTGTT	59.897	45.455	0.00	0.00	0.00	3.32
317	318	2.148916	TTCTCGTAGCCTGTGTGTTG	57.851	50.000	0.00	0.00	0.00	3.33
318	319	1.037493	TCTCGTAGCCTGTGTGTTGT	58.963	50.000	0.00	0.00	0.00	3.32
319	320	1.000607	TCTCGTAGCCTGTGTGTTGTC	60.001	52.381	0.00	0.00	0.00	3.18
320	321	0.747852	TCGTAGCCTGTGTGTTGTCA	59.252	50.000	0.00	0.00	0.00	3.58
321	322	1.139989	CGTAGCCTGTGTGTTGTCAG	58.860	55.000	0.00	0.00	0.00	3.51
326	327	2.169832	CCTGTGTGTTGTCAGGGTAG	57.830	55.000	3.58	0.00	45.11	3.18
327	328	1.416401	CCTGTGTGTTGTCAGGGTAGT	59.584	52.381	3.58	0.00	45.11	2.73
328	329	2.483876	CTGTGTGTTGTCAGGGTAGTG	58.516	52.381	0.00	0.00	0.00	2.74
329	330	1.140052	TGTGTGTTGTCAGGGTAGTGG	59.860	52.381	0.00	0.00	0.00	4.00
330	331	1.140252	GTGTGTTGTCAGGGTAGTGGT	59.860	52.381	0.00	0.00	0.00	4.16
331	332	1.841277	TGTGTTGTCAGGGTAGTGGTT	59.159	47.619	0.00	0.00	0.00	3.67
332	333	2.218603	GTGTTGTCAGGGTAGTGGTTG	58.781	52.381	0.00	0.00	0.00	3.77
333	334	2.120312	TGTTGTCAGGGTAGTGGTTGA	58.880	47.619	0.00	0.00	0.00	3.18
334	335	2.708861	TGTTGTCAGGGTAGTGGTTGAT	59.291	45.455	0.00	0.00	0.00	2.57
335	336	3.074412	GTTGTCAGGGTAGTGGTTGATG	58.926	50.000	0.00	0.00	0.00	3.07
336	337	2.334977	TGTCAGGGTAGTGGTTGATGT	58.665	47.619	0.00	0.00	0.00	3.06
337	338	2.708861	TGTCAGGGTAGTGGTTGATGTT	59.291	45.455	0.00	0.00	0.00	2.71
338	339	3.074412	GTCAGGGTAGTGGTTGATGTTG	58.926	50.000	0.00	0.00	0.00	3.33
339	340	2.708861	TCAGGGTAGTGGTTGATGTTGT	59.291	45.455	0.00	0.00	0.00	3.32
340	341	3.137544	TCAGGGTAGTGGTTGATGTTGTT	59.862	43.478	0.00	0.00	0.00	2.83
341	342	3.253188	CAGGGTAGTGGTTGATGTTGTTG	59.747	47.826	0.00	0.00	0.00	3.33
342	343	2.556622	GGGTAGTGGTTGATGTTGTTGG	59.443	50.000	0.00	0.00	0.00	3.77
343	344	3.219281	GGTAGTGGTTGATGTTGTTGGT	58.781	45.455	0.00	0.00	0.00	3.67
344	345	3.252458	GGTAGTGGTTGATGTTGTTGGTC	59.748	47.826	0.00	0.00	0.00	4.02
345	346	3.011566	AGTGGTTGATGTTGTTGGTCA	57.988	42.857	0.00	0.00	0.00	4.02
346	347	2.687935	AGTGGTTGATGTTGTTGGTCAC	59.312	45.455	0.00	0.00	0.00	3.67
347	348	1.673400	TGGTTGATGTTGTTGGTCACG	59.327	47.619	0.00	0.00	0.00	4.35
348	349	1.001815	GGTTGATGTTGTTGGTCACGG	60.002	52.381	0.00	0.00	0.00	4.94
349	350	0.665835	TTGATGTTGTTGGTCACGGC	59.334	50.000	0.00	0.00	0.00	5.68
350	351	1.206578	GATGTTGTTGGTCACGGCG	59.793	57.895	4.80	4.80	0.00	6.46
351	352	1.503818	GATGTTGTTGGTCACGGCGT	61.504	55.000	6.77	6.77	0.00	5.68
352	353	1.781025	ATGTTGTTGGTCACGGCGTG	61.781	55.000	32.75	32.75	34.45	5.34
353	354	3.578272	TTGTTGGTCACGGCGTGC	61.578	61.111	33.59	26.42	32.98	5.34
356	357	4.555709	TTGGTCACGGCGTGCCTT	62.556	61.111	35.38	7.95	33.31	4.35
357	358	3.166490	TTGGTCACGGCGTGCCTTA	62.166	57.895	35.38	26.29	33.31	2.69
358	359	2.813908	GGTCACGGCGTGCCTTAG	60.814	66.667	33.59	10.94	32.98	2.18
359	360	2.260434	GTCACGGCGTGCCTTAGA	59.740	61.111	33.59	14.01	32.98	2.10
360	361	1.153628	GTCACGGCGTGCCTTAGAT	60.154	57.895	33.59	0.00	32.98	1.98
361	362	1.141019	TCACGGCGTGCCTTAGATC	59.859	57.895	33.59	0.00	32.98	2.75
362	363	1.141881	CACGGCGTGCCTTAGATCT	59.858	57.895	28.30	0.00	0.00	2.75
363	364	0.460284	CACGGCGTGCCTTAGATCTT	60.460	55.000	28.30	0.00	0.00	2.40
364	365	0.460284	ACGGCGTGCCTTAGATCTTG	60.460	55.000	13.76	0.00	0.00	3.02
365	366	0.460284	CGGCGTGCCTTAGATCTTGT	60.460	55.000	9.55	0.00	0.00	3.16
366	367	1.739067	GGCGTGCCTTAGATCTTGTT	58.261	50.000	0.00	0.00	0.00	2.83
367	368	2.084546	GGCGTGCCTTAGATCTTGTTT	58.915	47.619	0.00	0.00	0.00	2.83
368	369	2.488153	GGCGTGCCTTAGATCTTGTTTT	59.512	45.455	0.00	0.00	0.00	2.43
369	370	3.057526	GGCGTGCCTTAGATCTTGTTTTT	60.058	43.478	0.00	0.00	0.00	1.94
410	411	3.959535	TTTTTGGCCATGTTCATCCTC	57.040	42.857	6.09	0.00	0.00	3.71
411	412	1.462616	TTTGGCCATGTTCATCCTCG	58.537	50.000	6.09	0.00	0.00	4.63
412	413	0.617935	TTGGCCATGTTCATCCTCGA	59.382	50.000	6.09	0.00	0.00	4.04
413	414	0.839277	TGGCCATGTTCATCCTCGAT	59.161	50.000	0.00	0.00	0.00	3.59
414	415	1.233019	GGCCATGTTCATCCTCGATG	58.767	55.000	0.00	0.00	41.00	3.84
415	416	0.590195	GCCATGTTCATCCTCGATGC	59.410	55.000	0.00	0.00	39.63	3.91
416	417	1.813092	GCCATGTTCATCCTCGATGCT	60.813	52.381	0.00	0.00	39.63	3.79
417	418	2.569059	CCATGTTCATCCTCGATGCTT	58.431	47.619	0.00	0.00	39.63	3.91
418	419	2.547211	CCATGTTCATCCTCGATGCTTC	59.453	50.000	0.00	0.00	39.63	3.86
419	420	3.200483	CATGTTCATCCTCGATGCTTCA	58.800	45.455	0.08	0.00	39.63	3.02
420	421	3.333029	TGTTCATCCTCGATGCTTCAA	57.667	42.857	0.08	0.00	39.63	2.69
421	422	3.264947	TGTTCATCCTCGATGCTTCAAG	58.735	45.455	0.08	0.00	39.63	3.02
422	423	3.265791	GTTCATCCTCGATGCTTCAAGT	58.734	45.455	0.08	0.00	39.63	3.16
423	424	3.616956	TCATCCTCGATGCTTCAAGTT	57.383	42.857	0.08	0.00	39.63	2.66
424	425	3.264947	TCATCCTCGATGCTTCAAGTTG	58.735	45.455	0.00	0.00	39.63	3.16
425	426	3.055891	TCATCCTCGATGCTTCAAGTTGA	60.056	43.478	0.08	0.08	39.63	3.18
426	427	3.616956	TCCTCGATGCTTCAAGTTGAT	57.383	42.857	6.36	0.00	0.00	2.57
427	428	3.525537	TCCTCGATGCTTCAAGTTGATC	58.474	45.455	6.36	0.13	0.00	2.92
428	429	3.055891	TCCTCGATGCTTCAAGTTGATCA	60.056	43.478	6.36	8.45	0.00	2.92
429	430	3.063180	CCTCGATGCTTCAAGTTGATCAC	59.937	47.826	6.36	0.02	0.00	3.06
430	431	2.667969	TCGATGCTTCAAGTTGATCACG	59.332	45.455	6.36	12.87	0.00	4.35
431	432	2.222886	CGATGCTTCAAGTTGATCACGG	60.223	50.000	6.36	0.94	0.00	4.94
432	433	2.254546	TGCTTCAAGTTGATCACGGT	57.745	45.000	6.36	0.00	0.00	4.83
433	434	1.872952	TGCTTCAAGTTGATCACGGTG	59.127	47.619	6.36	0.56	0.00	4.94
434	435	1.873591	GCTTCAAGTTGATCACGGTGT	59.126	47.619	6.36	0.00	0.00	4.16
435	436	2.290641	GCTTCAAGTTGATCACGGTGTT	59.709	45.455	6.36	0.00	0.00	3.32
436	437	3.849645	GCTTCAAGTTGATCACGGTGTTG	60.850	47.826	6.36	4.44	0.00	3.33
437	438	2.912771	TCAAGTTGATCACGGTGTTGT	58.087	42.857	8.17	0.00	0.00	3.32
438	439	2.611751	TCAAGTTGATCACGGTGTTGTG	59.388	45.455	8.17	0.00	41.28	3.33
439	440	2.325583	AGTTGATCACGGTGTTGTGT	57.674	45.000	8.17	0.00	40.74	3.72
440	441	2.639065	AGTTGATCACGGTGTTGTGTT	58.361	42.857	8.17	0.00	40.74	3.32
441	442	2.612212	AGTTGATCACGGTGTTGTGTTC	59.388	45.455	8.17	0.00	40.74	3.18
442	443	2.612212	GTTGATCACGGTGTTGTGTTCT	59.388	45.455	8.17	0.00	40.74	3.01
443	444	2.912771	TGATCACGGTGTTGTGTTCTT	58.087	42.857	8.17	0.00	40.74	2.52
444	445	2.611751	TGATCACGGTGTTGTGTTCTTG	59.388	45.455	8.17	0.00	40.74	3.02
445	446	0.730265	TCACGGTGTTGTGTTCTTGC	59.270	50.000	8.17	0.00	40.74	4.01
446	447	0.449786	CACGGTGTTGTGTTCTTGCA	59.550	50.000	0.00	0.00	35.12	4.08
447	448	0.732571	ACGGTGTTGTGTTCTTGCAG	59.267	50.000	0.00	0.00	0.00	4.41
448	449	1.013596	CGGTGTTGTGTTCTTGCAGA	58.986	50.000	0.00	0.00	0.00	4.26
449	450	1.400142	CGGTGTTGTGTTCTTGCAGAA	59.600	47.619	0.00	0.00	0.00	3.02
450	451	2.539547	CGGTGTTGTGTTCTTGCAGAAG	60.540	50.000	0.00	0.00	34.42	2.85
451	452	2.454055	GTGTTGTGTTCTTGCAGAAGC	58.546	47.619	0.00	0.00	34.42	3.86
452	453	1.405105	TGTTGTGTTCTTGCAGAAGCC	59.595	47.619	0.00	0.00	41.13	4.35
453	454	0.662619	TTGTGTTCTTGCAGAAGCCG	59.337	50.000	0.00	0.00	41.13	5.52
454	455	1.165907	TGTGTTCTTGCAGAAGCCGG	61.166	55.000	0.00	0.00	41.13	6.13
455	456	1.600636	TGTTCTTGCAGAAGCCGGG	60.601	57.895	2.18	0.00	41.13	5.73
456	457	1.600916	GTTCTTGCAGAAGCCGGGT	60.601	57.895	0.00	0.00	41.13	5.28
457	458	1.600636	TTCTTGCAGAAGCCGGGTG	60.601	57.895	7.07	0.00	41.13	4.61
458	459	2.281761	CTTGCAGAAGCCGGGTGT	60.282	61.111	7.07	0.00	41.13	4.16
459	460	1.003839	CTTGCAGAAGCCGGGTGTA	60.004	57.895	7.07	0.00	41.13	2.90
460	461	1.298859	CTTGCAGAAGCCGGGTGTAC	61.299	60.000	7.07	1.84	41.13	2.90
461	462	1.764571	TTGCAGAAGCCGGGTGTACT	61.765	55.000	7.07	4.53	41.13	2.73
462	463	1.003718	GCAGAAGCCGGGTGTACTT	60.004	57.895	7.07	0.00	33.58	2.24
463	464	1.298859	GCAGAAGCCGGGTGTACTTG	61.299	60.000	7.07	2.77	33.58	3.16
464	465	0.320374	CAGAAGCCGGGTGTACTTGA	59.680	55.000	7.07	0.00	0.00	3.02
465	466	1.066143	CAGAAGCCGGGTGTACTTGAT	60.066	52.381	7.07	0.00	0.00	2.57
466	467	2.167693	CAGAAGCCGGGTGTACTTGATA	59.832	50.000	7.07	0.00	0.00	2.15
467	468	3.039011	AGAAGCCGGGTGTACTTGATAT	58.961	45.455	7.07	0.00	0.00	1.63
468	469	3.454812	AGAAGCCGGGTGTACTTGATATT	59.545	43.478	7.07	0.00	0.00	1.28
469	470	4.652421	AGAAGCCGGGTGTACTTGATATTA	59.348	41.667	7.07	0.00	0.00	0.98
470	471	5.129815	AGAAGCCGGGTGTACTTGATATTAA	59.870	40.000	7.07	0.00	0.00	1.40
471	472	5.362105	AGCCGGGTGTACTTGATATTAAA	57.638	39.130	4.72	0.00	0.00	1.52
472	473	5.937111	AGCCGGGTGTACTTGATATTAAAT	58.063	37.500	4.72	0.00	0.00	1.40
473	474	6.362248	AGCCGGGTGTACTTGATATTAAATT	58.638	36.000	4.72	0.00	0.00	1.82
474	475	7.511268	AGCCGGGTGTACTTGATATTAAATTA	58.489	34.615	4.72	0.00	0.00	1.40
475	476	7.443272	AGCCGGGTGTACTTGATATTAAATTAC	59.557	37.037	4.72	0.00	0.00	1.89
476	477	7.443272	GCCGGGTGTACTTGATATTAAATTACT	59.557	37.037	2.18	0.00	0.00	2.24
477	478	9.985730	CCGGGTGTACTTGATATTAAATTACTA	57.014	33.333	0.00	0.00	0.00	1.82
524	525	9.706691	AAAATAGTTATTGAACTCGACTCTTGA	57.293	29.630	0.00	0.00	42.50	3.02
525	526	9.877178	AAATAGTTATTGAACTCGACTCTTGAT	57.123	29.630	0.00	0.00	42.50	2.57
526	527	9.522804	AATAGTTATTGAACTCGACTCTTGATC	57.477	33.333	0.00	0.00	42.50	2.92
527	528	6.030849	AGTTATTGAACTCGACTCTTGATCG	58.969	40.000	0.00	0.00	42.50	3.69
528	529	3.917329	TTGAACTCGACTCTTGATCGT	57.083	42.857	0.00	0.00	40.50	3.73
529	530	3.917329	TGAACTCGACTCTTGATCGTT	57.083	42.857	0.00	0.00	40.50	3.85
530	531	4.238761	TGAACTCGACTCTTGATCGTTT	57.761	40.909	0.00	0.00	40.50	3.60
531	532	4.227538	TGAACTCGACTCTTGATCGTTTC	58.772	43.478	0.00	0.00	40.50	2.78
532	533	3.917329	ACTCGACTCTTGATCGTTTCA	57.083	42.857	0.00	0.00	40.50	2.69
533	534	4.238761	ACTCGACTCTTGATCGTTTCAA	57.761	40.909	4.06	4.06	42.09	2.69
534	535	4.617959	ACTCGACTCTTGATCGTTTCAAA	58.382	39.130	5.36	0.00	43.64	2.69
535	536	5.047847	ACTCGACTCTTGATCGTTTCAAAA	58.952	37.500	5.36	0.00	43.64	2.44
536	537	5.522460	ACTCGACTCTTGATCGTTTCAAAAA	59.478	36.000	5.36	0.00	43.64	1.94
551	552	2.848608	AAAAAGGGCCCAAGGTTCC	58.151	52.632	27.56	0.00	0.00	3.62
552	553	0.030603	AAAAAGGGCCCAAGGTTCCA	60.031	50.000	27.56	0.00	0.00	3.53
553	554	0.762842	AAAAGGGCCCAAGGTTCCAC	60.763	55.000	27.56	0.00	0.00	4.02
554	555	2.994643	AAAGGGCCCAAGGTTCCACG	62.995	60.000	27.56	0.00	0.00	4.94
555	556	4.280019	GGGCCCAAGGTTCCACGT	62.280	66.667	19.95	0.00	0.00	4.49
556	557	2.203437	GGCCCAAGGTTCCACGTT	60.203	61.111	0.00	0.00	0.00	3.99
557	558	2.561037	GGCCCAAGGTTCCACGTTG	61.561	63.158	0.00	2.93	41.95	4.10
560	561	3.039134	CAAGGTTCCACGTTGGCC	58.961	61.111	0.00	0.00	39.51	5.36
561	562	2.203437	AAGGTTCCACGTTGGCCC	60.203	61.111	0.00	0.00	37.47	5.80
562	563	4.636435	AGGTTCCACGTTGGCCCG	62.636	66.667	0.00	0.00	37.47	6.13
565	566	4.877619	TTCCACGTTGGCCCGCAA	62.878	61.111	0.00	0.00	37.47	4.85
566	567	4.652131	TCCACGTTGGCCCGCAAT	62.652	61.111	0.00	0.00	37.47	3.56
567	568	2.748251	CCACGTTGGCCCGCAATA	60.748	61.111	0.00	0.00	0.00	1.90
568	569	2.118404	CCACGTTGGCCCGCAATAT	61.118	57.895	0.00	0.00	0.00	1.28
569	570	0.816018	CCACGTTGGCCCGCAATATA	60.816	55.000	0.00	0.00	0.00	0.86
570	571	1.018148	CACGTTGGCCCGCAATATAA	58.982	50.000	0.00	0.00	0.00	0.98
571	572	1.402259	CACGTTGGCCCGCAATATAAA	59.598	47.619	0.00	0.00	0.00	1.40
572	573	2.093106	ACGTTGGCCCGCAATATAAAA	58.907	42.857	0.00	0.00	0.00	1.52
573	574	2.098443	ACGTTGGCCCGCAATATAAAAG	59.902	45.455	0.00	0.00	0.00	2.27
574	575	2.356382	CGTTGGCCCGCAATATAAAAGA	59.644	45.455	0.00	0.00	0.00	2.52
575	576	3.702330	GTTGGCCCGCAATATAAAAGAC	58.298	45.455	0.00	0.00	0.00	3.01
576	577	3.006112	TGGCCCGCAATATAAAAGACA	57.994	42.857	0.00	0.00	0.00	3.41
577	578	2.685897	TGGCCCGCAATATAAAAGACAC	59.314	45.455	0.00	0.00	0.00	3.67
578	579	2.949644	GGCCCGCAATATAAAAGACACT	59.050	45.455	0.00	0.00	0.00	3.55
579	580	4.131596	GGCCCGCAATATAAAAGACACTA	58.868	43.478	0.00	0.00	0.00	2.74
580	581	4.577283	GGCCCGCAATATAAAAGACACTAA	59.423	41.667	0.00	0.00	0.00	2.24
581	582	5.066764	GGCCCGCAATATAAAAGACACTAAA	59.933	40.000	0.00	0.00	0.00	1.85
582	583	6.404954	GGCCCGCAATATAAAAGACACTAAAA	60.405	38.462	0.00	0.00	0.00	1.52
583	584	7.030768	GCCCGCAATATAAAAGACACTAAAAA	58.969	34.615	0.00	0.00	0.00	1.94
584	585	7.704899	GCCCGCAATATAAAAGACACTAAAAAT	59.295	33.333	0.00	0.00	0.00	1.82
595	596	9.476202	AAAAGACACTAAAAATAATGCAAGTCC	57.524	29.630	0.00	0.00	0.00	3.85
596	597	7.759489	AGACACTAAAAATAATGCAAGTCCA	57.241	32.000	0.00	0.00	0.00	4.02
597	598	8.353423	AGACACTAAAAATAATGCAAGTCCAT	57.647	30.769	0.00	0.00	0.00	3.41
598	599	8.462016	AGACACTAAAAATAATGCAAGTCCATC	58.538	33.333	0.00	0.00	0.00	3.51
599	600	8.353423	ACACTAAAAATAATGCAAGTCCATCT	57.647	30.769	0.00	0.00	0.00	2.90
600	601	8.806146	ACACTAAAAATAATGCAAGTCCATCTT	58.194	29.630	0.00	0.00	36.75	2.40
611	612	5.517037	CAAGTCCATCTTGTACTTCGTTC	57.483	43.478	0.00	0.00	45.89	3.95
612	613	5.230942	CAAGTCCATCTTGTACTTCGTTCT	58.769	41.667	0.00	0.00	45.89	3.01
613	614	4.810790	AGTCCATCTTGTACTTCGTTCTG	58.189	43.478	0.00	0.00	0.00	3.02
614	615	3.927142	GTCCATCTTGTACTTCGTTCTGG	59.073	47.826	0.00	0.00	0.00	3.86
615	616	2.673368	CCATCTTGTACTTCGTTCTGGC	59.327	50.000	0.00	0.00	0.00	4.85
616	617	2.450609	TCTTGTACTTCGTTCTGGCC	57.549	50.000	0.00	0.00	0.00	5.36
617	618	1.001633	TCTTGTACTTCGTTCTGGCCC	59.998	52.381	0.00	0.00	0.00	5.80
618	619	1.002087	CTTGTACTTCGTTCTGGCCCT	59.998	52.381	0.00	0.00	0.00	5.19
619	620	1.053424	TGTACTTCGTTCTGGCCCTT	58.947	50.000	0.00	0.00	0.00	3.95
620	621	1.001633	TGTACTTCGTTCTGGCCCTTC	59.998	52.381	0.00	0.00	0.00	3.46
621	622	1.001633	GTACTTCGTTCTGGCCCTTCA	59.998	52.381	0.00	0.00	0.00	3.02
622	623	0.035458	ACTTCGTTCTGGCCCTTCAG	59.965	55.000	0.00	0.00	36.17	3.02
623	624	0.674895	CTTCGTTCTGGCCCTTCAGG	60.675	60.000	0.00	0.00	35.58	3.86
632	633	4.672251	CCCTTCAGGCCCAGATTG	57.328	61.111	0.00	0.00	0.00	2.67
633	634	2.001803	CCCTTCAGGCCCAGATTGA	58.998	57.895	0.00	0.00	0.00	2.57
634	635	0.554792	CCCTTCAGGCCCAGATTGAT	59.445	55.000	0.00	0.00	0.00	2.57
635	636	1.478288	CCCTTCAGGCCCAGATTGATC	60.478	57.143	0.00	0.00	0.00	2.92
636	637	1.590932	CTTCAGGCCCAGATTGATCG	58.409	55.000	0.00	0.00	0.00	3.69
637	638	0.181114	TTCAGGCCCAGATTGATCGG	59.819	55.000	0.00	0.00	0.00	4.18
638	639	1.895707	CAGGCCCAGATTGATCGGC	60.896	63.158	0.00	0.00	0.00	5.54
639	640	2.192979	GGCCCAGATTGATCGGCA	59.807	61.111	8.96	0.00	0.00	5.69
640	641	1.453745	GGCCCAGATTGATCGGCAA	60.454	57.895	8.96	0.00	41.53	4.52
641	642	1.037030	GGCCCAGATTGATCGGCAAA	61.037	55.000	8.96	0.00	40.48	3.68
642	643	0.101219	GCCCAGATTGATCGGCAAAC	59.899	55.000	2.54	0.00	40.48	2.93
643	644	1.462616	CCCAGATTGATCGGCAAACA	58.537	50.000	0.00	0.00	40.48	2.83
644	645	1.402968	CCCAGATTGATCGGCAAACAG	59.597	52.381	0.00	0.00	40.48	3.16
645	646	1.402968	CCAGATTGATCGGCAAACAGG	59.597	52.381	0.00	0.00	40.48	4.00
646	647	2.086869	CAGATTGATCGGCAAACAGGT	58.913	47.619	0.00	0.00	40.48	4.00
647	648	2.096496	CAGATTGATCGGCAAACAGGTC	59.904	50.000	0.00	0.00	40.48	3.85
648	649	1.062587	GATTGATCGGCAAACAGGTCG	59.937	52.381	0.00	0.00	40.48	4.79
651	652	2.029964	TCGGCAAACAGGTCGACC	59.970	61.111	27.67	27.67	40.41	4.79
652	653	3.411351	CGGCAAACAGGTCGACCG	61.411	66.667	28.26	23.67	38.35	4.79
653	654	3.047877	GGCAAACAGGTCGACCGG	61.048	66.667	29.91	29.91	42.08	5.28
654	655	3.047877	GCAAACAGGTCGACCGGG	61.048	66.667	33.38	27.85	42.08	5.73
655	656	2.424302	CAAACAGGTCGACCGGGT	59.576	61.111	33.38	27.76	42.08	5.28
656	657	1.227734	CAAACAGGTCGACCGGGTT	60.228	57.895	33.38	31.42	41.83	4.11
657	658	1.070275	AAACAGGTCGACCGGGTTC	59.930	57.895	33.19	12.39	36.35	3.62
658	659	1.688269	AAACAGGTCGACCGGGTTCA	61.688	55.000	33.19	0.00	36.35	3.18
659	660	1.688269	AACAGGTCGACCGGGTTCAA	61.688	55.000	33.38	0.00	42.08	2.69
660	661	1.666872	CAGGTCGACCGGGTTCAAC	60.667	63.158	28.26	1.55	42.08	3.18
661	662	1.835712	AGGTCGACCGGGTTCAACT	60.836	57.895	28.26	5.08	42.08	3.16
662	663	1.070275	GGTCGACCGGGTTCAACTT	59.930	57.895	20.85	0.00	0.00	2.66
663	664	0.533531	GGTCGACCGGGTTCAACTTT	60.534	55.000	20.85	0.00	0.00	2.66
664	665	0.584876	GTCGACCGGGTTCAACTTTG	59.415	55.000	6.32	0.00	0.00	2.77
665	666	0.464870	TCGACCGGGTTCAACTTTGA	59.535	50.000	6.32	0.00	34.92	2.69
666	667	1.134461	TCGACCGGGTTCAACTTTGAA	60.134	47.619	6.32	0.07	44.31	2.69
667	668	1.263217	CGACCGGGTTCAACTTTGAAG	59.737	52.381	6.32	0.00	46.80	3.02
679	680	6.653273	TCAACTTTGAAGCTCATAATCTCG	57.347	37.500	0.00	0.00	33.55	4.04
680	681	5.063944	TCAACTTTGAAGCTCATAATCTCGC	59.936	40.000	0.00	0.00	33.55	5.03
681	682	3.873952	ACTTTGAAGCTCATAATCTCGCC	59.126	43.478	0.00	0.00	0.00	5.54
682	683	3.541996	TTGAAGCTCATAATCTCGCCA	57.458	42.857	0.00	0.00	0.00	5.69
683	684	3.541996	TGAAGCTCATAATCTCGCCAA	57.458	42.857	0.00	0.00	0.00	4.52
684	685	3.872696	TGAAGCTCATAATCTCGCCAAA	58.127	40.909	0.00	0.00	0.00	3.28
685	686	4.454678	TGAAGCTCATAATCTCGCCAAAT	58.545	39.130	0.00	0.00	0.00	2.32
686	687	4.883585	TGAAGCTCATAATCTCGCCAAATT	59.116	37.500	0.00	0.00	0.00	1.82
687	688	5.357878	TGAAGCTCATAATCTCGCCAAATTT	59.642	36.000	0.00	0.00	0.00	1.82
688	689	5.179045	AGCTCATAATCTCGCCAAATTTG	57.821	39.130	11.40	11.40	0.00	2.32
689	690	3.732721	GCTCATAATCTCGCCAAATTTGC	59.267	43.478	12.92	7.50	0.00	3.68
690	691	4.498682	GCTCATAATCTCGCCAAATTTGCT	60.499	41.667	12.92	0.00	0.00	3.91
691	692	5.581126	TCATAATCTCGCCAAATTTGCTT	57.419	34.783	12.92	2.36	0.00	3.91
692	693	5.342433	TCATAATCTCGCCAAATTTGCTTG	58.658	37.500	12.92	4.62	0.00	4.01
693	694	2.000429	ATCTCGCCAAATTTGCTTGC	58.000	45.000	12.92	9.89	0.00	4.01
694	695	0.672889	TCTCGCCAAATTTGCTTGCA	59.327	45.000	12.92	0.00	0.00	4.08
695	696	1.068281	TCTCGCCAAATTTGCTTGCAA	59.932	42.857	12.92	3.70	0.00	4.08
696	697	1.192980	CTCGCCAAATTTGCTTGCAAC	59.807	47.619	12.92	0.00	0.00	4.17
697	698	1.202510	TCGCCAAATTTGCTTGCAACT	60.203	42.857	12.92	0.00	0.00	3.16
698	699	1.598601	CGCCAAATTTGCTTGCAACTT	59.401	42.857	12.92	6.34	0.00	2.66
699	700	2.799412	CGCCAAATTTGCTTGCAACTTA	59.201	40.909	12.92	0.00	0.00	2.24
700	701	3.120923	CGCCAAATTTGCTTGCAACTTAG	60.121	43.478	12.92	5.94	0.00	2.18
701	702	4.057432	GCCAAATTTGCTTGCAACTTAGA	58.943	39.130	12.92	0.00	0.00	2.10
702	703	4.692155	GCCAAATTTGCTTGCAACTTAGAT	59.308	37.500	12.92	0.00	0.00	1.98
703	704	5.868801	GCCAAATTTGCTTGCAACTTAGATA	59.131	36.000	12.92	0.00	0.00	1.98
704	705	6.536224	GCCAAATTTGCTTGCAACTTAGATAT	59.464	34.615	12.92	0.00	0.00	1.63
705	706	7.706179	GCCAAATTTGCTTGCAACTTAGATATA	59.294	33.333	12.92	0.00	0.00	0.86
706	707	9.241317	CCAAATTTGCTTGCAACTTAGATATAG	57.759	33.333	12.92	0.00	0.00	1.31
707	708	9.241317	CAAATTTGCTTGCAACTTAGATATAGG	57.759	33.333	5.01	0.00	0.00	2.57
708	709	8.525290	AATTTGCTTGCAACTTAGATATAGGT	57.475	30.769	7.60	0.00	0.00	3.08
709	710	9.627123	AATTTGCTTGCAACTTAGATATAGGTA	57.373	29.630	7.60	0.00	0.00	3.08
710	711	8.662781	TTTGCTTGCAACTTAGATATAGGTAG	57.337	34.615	7.60	0.00	0.00	3.18
711	712	7.597288	TGCTTGCAACTTAGATATAGGTAGA	57.403	36.000	0.00	0.00	0.00	2.59
712	713	7.661968	TGCTTGCAACTTAGATATAGGTAGAG	58.338	38.462	0.00	0.00	0.00	2.43
713	714	7.505923	TGCTTGCAACTTAGATATAGGTAGAGA	59.494	37.037	0.00	0.00	0.00	3.10
714	715	8.527810	GCTTGCAACTTAGATATAGGTAGAGAT	58.472	37.037	0.00	0.00	0.00	2.75
715	716	9.853555	CTTGCAACTTAGATATAGGTAGAGATG	57.146	37.037	0.00	0.00	0.00	2.90
716	717	8.941995	TGCAACTTAGATATAGGTAGAGATGT	57.058	34.615	0.00	0.00	0.00	3.06
717	718	9.368416	TGCAACTTAGATATAGGTAGAGATGTT	57.632	33.333	0.00	0.00	0.00	2.71
721	722	9.884814	ACTTAGATATAGGTAGAGATGTTTGGT	57.115	33.333	0.00	0.00	0.00	3.67
724	725	7.967908	AGATATAGGTAGAGATGTTTGGTTGG	58.032	38.462	0.00	0.00	0.00	3.77
725	726	3.721087	AGGTAGAGATGTTTGGTTGGG	57.279	47.619	0.00	0.00	0.00	4.12
726	727	2.092323	GGTAGAGATGTTTGGTTGGGC	58.908	52.381	0.00	0.00	0.00	5.36
727	728	2.554344	GGTAGAGATGTTTGGTTGGGCA	60.554	50.000	0.00	0.00	0.00	5.36
728	729	2.380064	AGAGATGTTTGGTTGGGCAA	57.620	45.000	0.00	0.00	0.00	4.52
729	730	2.893424	AGAGATGTTTGGTTGGGCAAT	58.107	42.857	0.00	0.00	0.00	3.56
730	731	2.827921	AGAGATGTTTGGTTGGGCAATC	59.172	45.455	0.00	0.00	0.00	2.67
731	732	1.901833	AGATGTTTGGTTGGGCAATCC	59.098	47.619	0.00	0.00	0.00	3.01
732	733	1.622811	GATGTTTGGTTGGGCAATCCA	59.377	47.619	0.00	0.00	45.43	3.41
740	741	3.605946	TGGGCAATCCACATAACCC	57.394	52.632	0.00	0.00	41.46	4.11
741	742	0.032615	TGGGCAATCCACATAACCCC	60.033	55.000	0.00	0.00	41.46	4.95
742	743	1.106944	GGGCAATCCACATAACCCCG	61.107	60.000	0.00	0.00	35.00	5.73
743	744	0.106918	GGCAATCCACATAACCCCGA	60.107	55.000	0.00	0.00	0.00	5.14
744	745	1.478654	GGCAATCCACATAACCCCGAT	60.479	52.381	0.00	0.00	0.00	4.18
745	746	1.880027	GCAATCCACATAACCCCGATC	59.120	52.381	0.00	0.00	0.00	3.69
746	747	2.487265	GCAATCCACATAACCCCGATCT	60.487	50.000	0.00	0.00	0.00	2.75
747	748	3.820557	CAATCCACATAACCCCGATCTT	58.179	45.455	0.00	0.00	0.00	2.40
748	749	3.492102	ATCCACATAACCCCGATCTTG	57.508	47.619	0.00	0.00	0.00	3.02
749	750	2.193127	TCCACATAACCCCGATCTTGT	58.807	47.619	0.00	0.00	0.00	3.16
750	751	3.376636	TCCACATAACCCCGATCTTGTA	58.623	45.455	0.00	0.00	0.00	2.41
751	752	3.133362	TCCACATAACCCCGATCTTGTAC	59.867	47.826	0.00	0.00	0.00	2.90
752	753	3.118555	CCACATAACCCCGATCTTGTACA	60.119	47.826	0.00	0.00	0.00	2.90
753	754	4.444306	CCACATAACCCCGATCTTGTACAT	60.444	45.833	0.00	0.00	0.00	2.29
754	755	5.221561	CCACATAACCCCGATCTTGTACATA	60.222	44.000	0.00	0.00	0.00	2.29
755	756	6.464222	CACATAACCCCGATCTTGTACATAT	58.536	40.000	0.00	0.00	0.00	1.78
756	757	6.368791	CACATAACCCCGATCTTGTACATATG	59.631	42.308	0.00	0.00	0.00	1.78
757	758	6.269077	ACATAACCCCGATCTTGTACATATGA	59.731	38.462	10.38	4.97	0.00	2.15
758	759	4.602340	ACCCCGATCTTGTACATATGAC	57.398	45.455	10.38	4.14	0.00	3.06
759	760	3.964688	ACCCCGATCTTGTACATATGACA	59.035	43.478	10.38	6.80	0.00	3.58
760	761	4.407621	ACCCCGATCTTGTACATATGACAA	59.592	41.667	10.38	13.67	35.55	3.18
761	762	5.071788	ACCCCGATCTTGTACATATGACAAT	59.928	40.000	10.38	2.38	36.27	2.71
762	763	5.997746	CCCCGATCTTGTACATATGACAATT	59.002	40.000	10.38	6.54	36.27	2.32
763	764	6.073058	CCCCGATCTTGTACATATGACAATTG	60.073	42.308	10.38	3.24	36.27	2.32
764	765	6.365839	CCGATCTTGTACATATGACAATTGC	58.634	40.000	10.38	0.00	36.27	3.56
765	766	6.203530	CCGATCTTGTACATATGACAATTGCT	59.796	38.462	10.38	0.00	36.27	3.91
766	767	7.254898	CCGATCTTGTACATATGACAATTGCTT	60.255	37.037	10.38	0.00	36.27	3.91
767	768	7.795734	CGATCTTGTACATATGACAATTGCTTC	59.204	37.037	10.38	0.00	36.27	3.86
768	769	8.743085	ATCTTGTACATATGACAATTGCTTCT	57.257	30.769	10.38	0.00	36.27	2.85
769	770	7.977904	TCTTGTACATATGACAATTGCTTCTG	58.022	34.615	10.38	0.00	36.27	3.02
770	771	7.823799	TCTTGTACATATGACAATTGCTTCTGA	59.176	33.333	10.38	4.55	36.27	3.27
771	772	7.920160	TGTACATATGACAATTGCTTCTGAA	57.080	32.000	10.38	0.00	0.00	3.02
772	773	8.510243	TGTACATATGACAATTGCTTCTGAAT	57.490	30.769	10.38	0.00	0.00	2.57
773	774	9.612066	TGTACATATGACAATTGCTTCTGAATA	57.388	29.630	10.38	0.00	0.00	1.75
781	782	9.357652	TGACAATTGCTTCTGAATAAATAAAGC	57.642	29.630	5.05	0.00	42.02	3.51
785	786	5.894807	TGCTTCTGAATAAATAAAGCAGGC	58.105	37.500	4.12	0.00	45.25	4.85
786	787	4.972440	GCTTCTGAATAAATAAAGCAGGCG	59.028	41.667	0.00	0.00	41.46	5.52
787	788	5.220854	GCTTCTGAATAAATAAAGCAGGCGA	60.221	40.000	0.00	0.00	41.46	5.54
788	789	5.991328	TCTGAATAAATAAAGCAGGCGAG	57.009	39.130	0.00	0.00	0.00	5.03
789	790	5.670485	TCTGAATAAATAAAGCAGGCGAGA	58.330	37.500	0.00	0.00	0.00	4.04
790	791	6.291377	TCTGAATAAATAAAGCAGGCGAGAT	58.709	36.000	0.00	0.00	0.00	2.75
791	792	6.767902	TCTGAATAAATAAAGCAGGCGAGATT	59.232	34.615	0.00	0.00	0.00	2.40
792	793	7.283127	TCTGAATAAATAAAGCAGGCGAGATTT	59.717	33.333	0.00	2.20	0.00	2.17
793	794	7.417612	TGAATAAATAAAGCAGGCGAGATTTC	58.582	34.615	0.00	0.00	0.00	2.17
794	795	7.283127	TGAATAAATAAAGCAGGCGAGATTTCT	59.717	33.333	0.00	0.00	0.00	2.52
795	796	8.677148	AATAAATAAAGCAGGCGAGATTTCTA	57.323	30.769	0.00	0.00	0.00	2.10
796	797	8.677148	ATAAATAAAGCAGGCGAGATTTCTAA	57.323	30.769	0.00	0.00	0.00	2.10
797	798	7.391148	AAATAAAGCAGGCGAGATTTCTAAA	57.609	32.000	0.00	0.00	0.00	1.85
798	799	7.391148	AATAAAGCAGGCGAGATTTCTAAAA	57.609	32.000	0.00	0.00	0.00	1.52
799	800	5.705609	AAAGCAGGCGAGATTTCTAAAAA	57.294	34.783	0.00	0.00	0.00	1.94
902	942	6.151691	GTGTTGTACTTCGTGTAGGATTACA	58.848	40.000	0.00	0.00	37.45	2.41
916	956	2.417651	GGATTACAACCGTGTCCGATCA	60.418	50.000	0.00	0.00	39.30	2.92
927	975	0.249657	GTCCGATCAGATCAGGCCAC	60.250	60.000	5.01	4.79	0.00	5.01
1068	1141	0.464735	GCCTCGTCTCTCTAGCCTCA	60.465	60.000	0.00	0.00	0.00	3.86
1086	1159	0.108472	CAGCCGAGCAGATCAAGACA	60.108	55.000	0.00	0.00	0.00	3.41
1116	1189	4.392166	TGGAGCTACCGCCTCCCA	62.392	66.667	0.00	0.00	42.61	4.37
1272	1349	4.320870	CCAACTACAGGTCGGTGTAATTT	58.679	43.478	0.00	0.00	32.49	1.82
1276	1353	7.041235	CCAACTACAGGTCGGTGTAATTTAAAA	60.041	37.037	0.00	0.00	32.49	1.52
1287	1364	8.238631	TCGGTGTAATTTAAAAGCTAAACATCC	58.761	33.333	0.00	0.00	0.00	3.51
1288	1365	7.486870	CGGTGTAATTTAAAAGCTAAACATCCC	59.513	37.037	0.00	0.00	0.00	3.85
1291	1368	8.024285	TGTAATTTAAAAGCTAAACATCCCGTG	58.976	33.333	0.00	0.00	0.00	4.94
1294	1371	7.925043	TTTAAAAGCTAAACATCCCGTGATA	57.075	32.000	0.00	0.00	0.00	2.15
1295	1372	7.548196	TTAAAAGCTAAACATCCCGTGATAG	57.452	36.000	0.00	0.00	0.00	2.08
1300	1393	4.686554	GCTAAACATCCCGTGATAGTGATC	59.313	45.833	0.00	0.00	0.00	2.92
1322	1433	3.087031	AGCAAATTAGCTGACATGTGCT	58.913	40.909	14.41	14.41	44.66	4.40
1325	1436	2.118313	ATTAGCTGACATGTGCTGCA	57.882	45.000	18.32	0.00	40.08	4.41
1351	1462	2.892852	CAGGAAAATCCCTTTGTGCTCA	59.107	45.455	0.00	0.00	37.19	4.26
1561	1672	2.710902	CCTCGACGTGGATCAGGCA	61.711	63.158	10.42	0.00	0.00	4.75
1570	1681	3.195698	GATCAGGCAACCGGCGAC	61.196	66.667	9.30	0.00	46.16	5.19
1721	1883	3.893326	ACACGGAGATCATCATGAACA	57.107	42.857	0.00	0.00	0.00	3.18
2164	3386	3.520290	TCCGTCGAGCTTGATTACATT	57.480	42.857	7.00	0.00	0.00	2.71
2208	3430	1.035923	TTGTTGGCCGCTTGATTTGA	58.964	45.000	0.00	0.00	0.00	2.69
2209	3431	1.255882	TGTTGGCCGCTTGATTTGAT	58.744	45.000	0.00	0.00	0.00	2.57
2214	3436	4.734398	TGGCCGCTTGATTTGATTTATT	57.266	36.364	0.00	0.00	0.00	1.40
2215	3437	5.843673	TGGCCGCTTGATTTGATTTATTA	57.156	34.783	0.00	0.00	0.00	0.98
2227	3449	9.613428	TGATTTGATTTATTAGTAGGGTGTCTG	57.387	33.333	0.00	0.00	0.00	3.51
2229	3451	9.614792	ATTTGATTTATTAGTAGGGTGTCTGTC	57.385	33.333	0.00	0.00	0.00	3.51
2230	3452	7.120923	TGATTTATTAGTAGGGTGTCTGTCC	57.879	40.000	0.00	0.00	0.00	4.02
2249	3474	4.750098	TGTCCTTGTCTGATCGAGTTTTTC	59.250	41.667	0.00	0.00	0.00	2.29
2250	3475	4.152580	GTCCTTGTCTGATCGAGTTTTTCC	59.847	45.833	0.00	0.00	0.00	3.13
2251	3476	4.040461	TCCTTGTCTGATCGAGTTTTTCCT	59.960	41.667	0.00	0.00	0.00	3.36
2252	3477	4.757149	CCTTGTCTGATCGAGTTTTTCCTT	59.243	41.667	0.00	0.00	0.00	3.36
2253	3478	5.239525	CCTTGTCTGATCGAGTTTTTCCTTT	59.760	40.000	0.00	0.00	0.00	3.11
2254	3479	5.673337	TGTCTGATCGAGTTTTTCCTTTG	57.327	39.130	0.00	0.00	0.00	2.77
2255	3480	4.515191	TGTCTGATCGAGTTTTTCCTTTGG	59.485	41.667	0.00	0.00	0.00	3.28
2256	3481	4.755123	GTCTGATCGAGTTTTTCCTTTGGA	59.245	41.667	0.00	0.00	0.00	3.53
2257	3482	4.997395	TCTGATCGAGTTTTTCCTTTGGAG	59.003	41.667	0.00	0.00	31.21	3.86
2258	3483	4.968259	TGATCGAGTTTTTCCTTTGGAGA	58.032	39.130	0.00	0.00	31.21	3.71
2259	3484	5.560724	TGATCGAGTTTTTCCTTTGGAGAT	58.439	37.500	0.00	0.00	31.21	2.75
2260	3485	5.412594	TGATCGAGTTTTTCCTTTGGAGATG	59.587	40.000	0.00	0.00	31.21	2.90
2261	3486	4.968259	TCGAGTTTTTCCTTTGGAGATGA	58.032	39.130	0.00	0.00	31.21	2.92
2262	3487	4.997395	TCGAGTTTTTCCTTTGGAGATGAG	59.003	41.667	0.00	0.00	31.21	2.90
2263	3488	4.997395	CGAGTTTTTCCTTTGGAGATGAGA	59.003	41.667	0.00	0.00	31.21	3.27
2264	3489	5.106908	CGAGTTTTTCCTTTGGAGATGAGAC	60.107	44.000	0.00	0.00	31.21	3.36
2265	3490	5.946486	AGTTTTTCCTTTGGAGATGAGACT	58.054	37.500	0.00	0.00	31.21	3.24
2266	3491	5.767168	AGTTTTTCCTTTGGAGATGAGACTG	59.233	40.000	0.00	0.00	31.21	3.51
2267	3492	5.567037	TTTTCCTTTGGAGATGAGACTGA	57.433	39.130	0.00	0.00	31.21	3.41
2268	3493	5.768980	TTTCCTTTGGAGATGAGACTGAT	57.231	39.130	0.00	0.00	31.21	2.90
2269	3494	5.768980	TTCCTTTGGAGATGAGACTGATT	57.231	39.130	0.00	0.00	31.21	2.57
2270	3495	5.350504	TCCTTTGGAGATGAGACTGATTC	57.649	43.478	0.00	0.00	0.00	2.52
2271	3496	4.779489	TCCTTTGGAGATGAGACTGATTCA	59.221	41.667	0.00	0.00	0.00	2.57
2272	3497	5.105023	TCCTTTGGAGATGAGACTGATTCAG	60.105	44.000	12.17	12.17	37.52	3.02
2273	3498	8.894248	TTCCTTTGGAGATGAGACTGATTCAGT	61.894	40.741	19.05	19.05	39.28	3.41
2274	3499	6.127225	CCTTTGGAGATGAGACTGATTCAGTA	60.127	42.308	19.00	4.80	45.44	2.74
2275	3500	7.418827	CCTTTGGAGATGAGACTGATTCAGTAT	60.419	40.741	19.00	16.28	45.44	2.12
2276	3501	7.429374	TTGGAGATGAGACTGATTCAGTATT	57.571	36.000	19.00	10.67	45.44	1.89
2277	3502	8.539117	TTGGAGATGAGACTGATTCAGTATTA	57.461	34.615	19.00	13.31	45.44	0.98
2278	3503	8.175925	TGGAGATGAGACTGATTCAGTATTAG	57.824	38.462	19.00	0.00	45.44	1.73
2279	3504	8.001292	TGGAGATGAGACTGATTCAGTATTAGA	58.999	37.037	19.00	5.44	45.44	2.10
2280	3505	8.296713	GGAGATGAGACTGATTCAGTATTAGAC	58.703	40.741	19.00	10.94	45.44	2.59
2281	3506	8.995027	AGATGAGACTGATTCAGTATTAGACT	57.005	34.615	19.00	10.72	45.44	3.24
2305	3530	9.384764	ACTGTTATAAGAAGGATTTAAGTCAGC	57.615	33.333	0.03	0.00	0.00	4.26
2306	3531	9.383519	CTGTTATAAGAAGGATTTAAGTCAGCA	57.616	33.333	0.03	0.00	0.00	4.41
2307	3532	9.162764	TGTTATAAGAAGGATTTAAGTCAGCAC	57.837	33.333	0.03	0.00	0.00	4.40
2308	3533	9.162764	GTTATAAGAAGGATTTAAGTCAGCACA	57.837	33.333	0.03	0.00	0.00	4.57
2309	3534	5.948992	AAGAAGGATTTAAGTCAGCACAC	57.051	39.130	0.03	0.00	0.00	3.82
2310	3535	5.234466	AGAAGGATTTAAGTCAGCACACT	57.766	39.130	0.03	0.00	0.00	3.55
2311	3536	5.625150	AGAAGGATTTAAGTCAGCACACTT	58.375	37.500	5.70	5.70	39.94	3.16
2312	3537	6.769512	AGAAGGATTTAAGTCAGCACACTTA	58.230	36.000	0.03	3.93	37.75	2.24
2313	3538	7.398024	AGAAGGATTTAAGTCAGCACACTTAT	58.602	34.615	8.01	0.00	38.40	1.73
2314	3539	7.885399	AGAAGGATTTAAGTCAGCACACTTATT	59.115	33.333	8.01	1.06	38.40	1.40
2315	3540	9.162764	GAAGGATTTAAGTCAGCACACTTATTA	57.837	33.333	8.01	2.12	38.40	0.98
2316	3541	9.515226	AAGGATTTAAGTCAGCACACTTATTAA	57.485	29.630	8.01	2.68	38.40	1.40
2317	3542	9.515226	AGGATTTAAGTCAGCACACTTATTAAA	57.485	29.630	8.01	3.55	38.40	1.52
2326	3551	9.289303	GTCAGCACACTTATTAAATTTGTATGG	57.711	33.333	0.00	0.00	0.00	2.74
2327	3552	9.019656	TCAGCACACTTATTAAATTTGTATGGT	57.980	29.630	0.00	0.00	0.00	3.55
2328	3553	9.638239	CAGCACACTTATTAAATTTGTATGGTT	57.362	29.630	0.00	0.00	0.00	3.67
2338	3563	9.620660	ATTAAATTTGTATGGTTTCACGACTTC	57.379	29.630	0.00	0.00	0.00	3.01
2339	3564	5.622770	ATTTGTATGGTTTCACGACTTCC	57.377	39.130	0.00	0.00	0.00	3.46
2340	3565	4.345859	TTGTATGGTTTCACGACTTCCT	57.654	40.909	0.00	0.00	0.00	3.36
2341	3566	3.659786	TGTATGGTTTCACGACTTCCTG	58.340	45.455	0.00	0.00	0.00	3.86
2342	3567	1.523758	ATGGTTTCACGACTTCCTGC	58.476	50.000	0.00	0.00	0.00	4.85
2343	3568	0.179234	TGGTTTCACGACTTCCTGCA	59.821	50.000	0.00	0.00	0.00	4.41
2344	3569	1.305201	GGTTTCACGACTTCCTGCAA	58.695	50.000	0.00	0.00	0.00	4.08
2345	3570	1.002792	GGTTTCACGACTTCCTGCAAC	60.003	52.381	0.00	0.00	0.00	4.17
2346	3571	0.934496	TTTCACGACTTCCTGCAACG	59.066	50.000	0.00	0.00	0.00	4.10
2347	3572	0.179094	TTCACGACTTCCTGCAACGT	60.179	50.000	0.00	0.00	37.68	3.99
2348	3573	0.179094	TCACGACTTCCTGCAACGTT	60.179	50.000	0.00	0.00	35.05	3.99
2349	3574	0.655733	CACGACTTCCTGCAACGTTT	59.344	50.000	0.00	0.00	35.05	3.60
2350	3575	1.063469	CACGACTTCCTGCAACGTTTT	59.937	47.619	0.00	0.00	35.05	2.43
2351	3576	1.329599	ACGACTTCCTGCAACGTTTTC	59.670	47.619	0.00	0.00	33.48	2.29
2352	3577	1.597663	CGACTTCCTGCAACGTTTTCT	59.402	47.619	0.00	0.00	0.00	2.52
2353	3578	2.798283	CGACTTCCTGCAACGTTTTCTA	59.202	45.455	0.00	0.00	0.00	2.10
2354	3579	3.432252	CGACTTCCTGCAACGTTTTCTAT	59.568	43.478	0.00	0.00	0.00	1.98
2355	3580	4.624024	CGACTTCCTGCAACGTTTTCTATA	59.376	41.667	0.00	0.00	0.00	1.31
2441	3666	0.111639	GAGGTTGTGGCCCACCTTTA	59.888	55.000	17.32	0.00	36.63	1.85
2550	3784	1.672320	GATCCTAACCCTAGCCGCC	59.328	63.158	0.00	0.00	0.00	6.13
2551	3785	2.156051	GATCCTAACCCTAGCCGCCG	62.156	65.000	0.00	0.00	0.00	6.46
2552	3786	4.603946	CCTAACCCTAGCCGCCGC	62.604	72.222	0.00	0.00	0.00	6.53
2553	3787	4.603946	CTAACCCTAGCCGCCGCC	62.604	72.222	0.00	0.00	34.57	6.13
2868	4214	2.079158	CAACATCCATGAGCACGTTCT	58.921	47.619	0.00	0.00	0.00	3.01
2998	4344	1.268265	CGCTCATGATCAACGACGAA	58.732	50.000	0.00	0.00	0.00	3.85
3045	4391	1.414181	CATCCGCTGGTTCTACCTCAT	59.586	52.381	0.00	0.00	39.58	2.90
3119	4465	3.706055	GTCTGGACCAAGCTCAACA	57.294	52.632	0.00	0.00	0.00	3.33

Position	MSA Position	Penalty	Sequence	TM	GC	Self any TH	Self end TH	Hairpin	End Stability
23	24	3.029074	CGAATCTTTTATGGCGCGAAAG	58.971	45.455	12.10	10.82	0.00	2.62
24	25	2.789779	GCGAATCTTTTATGGCGCGAAA	60.790	45.455	12.10	0.00	35.02	3.46
25	26	1.267832	GCGAATCTTTTATGGCGCGAA	60.268	47.619	12.10	0.00	35.02	4.70
26	27	0.303493	GCGAATCTTTTATGGCGCGA	59.697	50.000	12.10	0.00	35.02	5.87
27	28	0.657368	GGCGAATCTTTTATGGCGCG	60.657	55.000	0.00	0.00	44.75	6.86
28	29	0.317854	GGGCGAATCTTTTATGGCGC	60.318	55.000	0.00	0.00	43.27	6.53
29	30	0.041312	CGGGCGAATCTTTTATGGCG	60.041	55.000	0.00	0.00	0.00	5.69
30	31	1.002792	GTCGGGCGAATCTTTTATGGC	60.003	52.381	0.00	0.00	0.00	4.40
31	32	1.260561	CGTCGGGCGAATCTTTTATGG	59.739	52.381	0.00	0.00	44.77	2.74
32	33	1.332904	GCGTCGGGCGAATCTTTTATG	60.333	52.381	6.02	0.00	44.77	1.90
33	34	0.935196	GCGTCGGGCGAATCTTTTAT	59.065	50.000	6.02	0.00	44.77	1.40
34	35	1.085501	GGCGTCGGGCGAATCTTTTA	61.086	55.000	6.02	0.00	44.92	1.52
35	36	2.396157	GGCGTCGGGCGAATCTTTT	61.396	57.895	6.02	0.00	44.92	2.27
36	37	2.818274	GGCGTCGGGCGAATCTTT	60.818	61.111	6.02	0.00	44.92	2.52
37	38	4.832608	GGGCGTCGGGCGAATCTT	62.833	66.667	6.02	0.00	44.92	2.40
52	53	4.702274	CTGGGGGTTGCTTGGGGG	62.702	72.222	0.00	0.00	0.00	5.40
75	76	4.710167	GGACCCAACCCGAACCCG	62.710	72.222	0.00	0.00	0.00	5.28
89	90	3.376914	GAAATTGGCGTCGGCGGAC	62.377	63.158	13.05	14.05	41.24	4.79
90	91	3.122323	GAAATTGGCGTCGGCGGA	61.122	61.111	13.05	5.72	41.24	5.54
91	92	4.514569	CGAAATTGGCGTCGGCGG	62.515	66.667	13.05	0.00	41.24	6.13
95	96	2.782615	GGACCGAAATTGGCGTCG	59.217	61.111	0.00	0.00	37.01	5.12
96	97	1.693083	CTCGGACCGAAATTGGCGTC	61.693	60.000	18.93	0.00	34.74	5.19
97	98	1.740296	CTCGGACCGAAATTGGCGT	60.740	57.895	18.93	0.00	34.74	5.68
98	99	3.089784	CTCGGACCGAAATTGGCG	58.910	61.111	18.93	0.00	34.74	5.69
99	100	2.761195	GGCTCGGACCGAAATTGGC	61.761	63.158	18.93	16.59	34.74	4.52
100	101	3.497879	GGCTCGGACCGAAATTGG	58.502	61.111	18.93	6.89	34.74	3.16
112	113	2.100216	CCATTTTTCGCCGGCTCG	59.900	61.111	26.68	10.37	0.00	5.03
113	114	2.489751	CCCATTTTTCGCCGGCTC	59.510	61.111	26.68	0.00	0.00	4.70
114	115	3.758931	GCCCATTTTTCGCCGGCT	61.759	61.111	26.68	0.00	36.65	5.52
115	116	4.812476	GGCCCATTTTTCGCCGGC	62.812	66.667	19.07	19.07	38.96	6.13
116	117	4.141965	GGGCCCATTTTTCGCCGG	62.142	66.667	19.95	0.00	43.99	6.13
117	118	4.141965	GGGGCCCATTTTTCGCCG	62.142	66.667	26.86	0.00	43.99	6.46
118	119	2.683572	AGGGGCCCATTTTTCGCC	60.684	61.111	27.72	1.71	42.23	5.54
119	120	2.578664	CAGGGGCCCATTTTTCGC	59.421	61.111	27.72	2.59	0.00	4.70
120	121	2.358372	CCCAGGGGCCCATTTTTCG	61.358	63.158	27.72	3.42	0.00	3.46
121	122	1.995066	CCCCAGGGGCCCATTTTTC	60.995	63.158	27.72	4.38	35.35	2.29
122	123	2.124768	CCCCAGGGGCCCATTTTT	59.875	61.111	27.72	0.00	35.35	1.94
123	124	2.873725	TCCCCAGGGGCCCATTTT	60.874	61.111	27.72	0.00	43.94	1.82
124	125	3.683518	GTCCCCAGGGGCCCATTT	61.684	66.667	27.72	5.30	43.94	2.32
138	139	3.665675	AATCAGCCCAGTCGCGTCC	62.666	63.158	5.77	0.00	0.00	4.79
139	140	1.298859	AAAATCAGCCCAGTCGCGTC	61.299	55.000	5.77	0.00	0.00	5.19
140	141	0.889186	AAAAATCAGCCCAGTCGCGT	60.889	50.000	5.77	0.00	0.00	6.01
141	142	1.875963	AAAAATCAGCCCAGTCGCG	59.124	52.632	0.00	0.00	0.00	5.87
168	169	1.566018	CCAGGTGACTTTTCGGTCGC	61.566	60.000	0.00	0.00	43.52	5.19
169	170	0.949105	CCCAGGTGACTTTTCGGTCG	60.949	60.000	0.00	0.00	40.21	4.79
170	171	0.605589	CCCCAGGTGACTTTTCGGTC	60.606	60.000	0.00	0.00	40.21	4.79
171	172	1.454539	CCCCAGGTGACTTTTCGGT	59.545	57.895	0.00	0.00	40.21	4.69
172	173	1.303317	CCCCCAGGTGACTTTTCGG	60.303	63.158	0.00	0.00	40.21	4.30
173	174	4.397348	CCCCCAGGTGACTTTTCG	57.603	61.111	0.00	0.00	40.21	3.46
214	215	7.550906	ACTCAAACACTAAATCCTAAGAGCATC	59.449	37.037	0.00	0.00	0.00	3.91
215	216	7.335422	CACTCAAACACTAAATCCTAAGAGCAT	59.665	37.037	0.00	0.00	0.00	3.79
216	217	6.650807	CACTCAAACACTAAATCCTAAGAGCA	59.349	38.462	0.00	0.00	0.00	4.26
217	218	6.092807	CCACTCAAACACTAAATCCTAAGAGC	59.907	42.308	0.00	0.00	0.00	4.09
218	219	7.386851	TCCACTCAAACACTAAATCCTAAGAG	58.613	38.462	0.00	0.00	0.00	2.85
219	220	7.311092	TCCACTCAAACACTAAATCCTAAGA	57.689	36.000	0.00	0.00	0.00	2.10
220	221	8.043710	AGATCCACTCAAACACTAAATCCTAAG	58.956	37.037	0.00	0.00	0.00	2.18
221	222	7.824289	CAGATCCACTCAAACACTAAATCCTAA	59.176	37.037	0.00	0.00	0.00	2.69
222	223	7.331026	CAGATCCACTCAAACACTAAATCCTA	58.669	38.462	0.00	0.00	0.00	2.94
223	224	6.176183	CAGATCCACTCAAACACTAAATCCT	58.824	40.000	0.00	0.00	0.00	3.24
224	225	5.355350	CCAGATCCACTCAAACACTAAATCC	59.645	44.000	0.00	0.00	0.00	3.01
225	226	5.163713	GCCAGATCCACTCAAACACTAAATC	60.164	44.000	0.00	0.00	0.00	2.17
226	227	4.702131	GCCAGATCCACTCAAACACTAAAT	59.298	41.667	0.00	0.00	0.00	1.40
227	228	4.072131	GCCAGATCCACTCAAACACTAAA	58.928	43.478	0.00	0.00	0.00	1.85
228	229	3.072330	TGCCAGATCCACTCAAACACTAA	59.928	43.478	0.00	0.00	0.00	2.24
229	230	2.637382	TGCCAGATCCACTCAAACACTA	59.363	45.455	0.00	0.00	0.00	2.74
230	231	1.421268	TGCCAGATCCACTCAAACACT	59.579	47.619	0.00	0.00	0.00	3.55
231	232	1.896220	TGCCAGATCCACTCAAACAC	58.104	50.000	0.00	0.00	0.00	3.32
232	233	2.229792	GTTGCCAGATCCACTCAAACA	58.770	47.619	0.00	0.00	0.00	2.83
233	234	2.229792	TGTTGCCAGATCCACTCAAAC	58.770	47.619	0.00	0.00	0.00	2.93
234	235	2.655090	TGTTGCCAGATCCACTCAAA	57.345	45.000	0.00	0.00	0.00	2.69
235	236	2.655090	TTGTTGCCAGATCCACTCAA	57.345	45.000	0.00	0.00	0.00	3.02
236	237	2.040145	TCATTGTTGCCAGATCCACTCA	59.960	45.455	0.00	0.00	0.00	3.41
237	238	2.421424	GTCATTGTTGCCAGATCCACTC	59.579	50.000	0.00	0.00	0.00	3.51
238	239	2.224843	TGTCATTGTTGCCAGATCCACT	60.225	45.455	0.00	0.00	0.00	4.00
239	240	2.161855	TGTCATTGTTGCCAGATCCAC	58.838	47.619	0.00	0.00	0.00	4.02
240	241	2.583024	TGTCATTGTTGCCAGATCCA	57.417	45.000	0.00	0.00	0.00	3.41
241	242	4.178540	CAAATGTCATTGTTGCCAGATCC	58.821	43.478	0.00	0.00	0.00	3.36
242	243	4.624024	CACAAATGTCATTGTTGCCAGATC	59.376	41.667	0.00	0.00	41.44	2.75
243	244	4.039488	ACACAAATGTCATTGTTGCCAGAT	59.961	37.500	0.00	0.00	41.44	2.90
244	245	3.384146	ACACAAATGTCATTGTTGCCAGA	59.616	39.130	0.00	0.00	41.44	3.86
245	246	3.491639	CACACAAATGTCATTGTTGCCAG	59.508	43.478	0.00	0.00	41.44	4.85
246	247	3.118847	ACACACAAATGTCATTGTTGCCA	60.119	39.130	0.00	0.00	41.44	4.92
247	248	3.456280	ACACACAAATGTCATTGTTGCC	58.544	40.909	0.00	0.00	41.44	4.52
248	249	4.697300	GACACACAAATGTCATTGTTGC	57.303	40.909	0.00	0.00	46.89	4.17
256	257	5.455392	CATTCAGAAGGACACACAAATGTC	58.545	41.667	0.00	0.00	46.95	3.06
257	258	4.261741	GCATTCAGAAGGACACACAAATGT	60.262	41.667	0.00	0.00	40.80	2.71
258	259	4.232221	GCATTCAGAAGGACACACAAATG	58.768	43.478	0.00	0.00	0.00	2.32
259	260	3.058016	CGCATTCAGAAGGACACACAAAT	60.058	43.478	0.00	0.00	0.00	2.32
260	261	2.290367	CGCATTCAGAAGGACACACAAA	59.710	45.455	0.00	0.00	0.00	2.83
261	262	1.872952	CGCATTCAGAAGGACACACAA	59.127	47.619	0.00	0.00	0.00	3.33
262	263	1.202639	ACGCATTCAGAAGGACACACA	60.203	47.619	0.00	0.00	0.00	3.72
263	264	1.512926	ACGCATTCAGAAGGACACAC	58.487	50.000	0.00	0.00	0.00	3.82
264	265	1.872952	CAACGCATTCAGAAGGACACA	59.127	47.619	0.00	0.00	0.00	3.72
265	266	1.400242	GCAACGCATTCAGAAGGACAC	60.400	52.381	0.00	0.00	0.00	3.67
266	267	0.874390	GCAACGCATTCAGAAGGACA	59.126	50.000	0.00	0.00	0.00	4.02
267	268	1.160137	AGCAACGCATTCAGAAGGAC	58.840	50.000	0.00	0.00	0.00	3.85
268	269	1.896220	AAGCAACGCATTCAGAAGGA	58.104	45.000	0.00	0.00	0.00	3.36
269	270	2.712057	AAAGCAACGCATTCAGAAGG	57.288	45.000	0.00	0.00	0.00	3.46
270	271	3.631144	TCAAAAGCAACGCATTCAGAAG	58.369	40.909	0.00	0.00	0.00	2.85
271	272	3.706802	TCAAAAGCAACGCATTCAGAA	57.293	38.095	0.00	0.00	0.00	3.02
272	273	3.314913	TCTTCAAAAGCAACGCATTCAGA	59.685	39.130	0.00	0.00	0.00	3.27
273	274	3.631144	TCTTCAAAAGCAACGCATTCAG	58.369	40.909	0.00	0.00	0.00	3.02
274	275	3.706802	TCTTCAAAAGCAACGCATTCA	57.293	38.095	0.00	0.00	0.00	2.57
275	276	4.044426	AGTTCTTCAAAAGCAACGCATTC	58.956	39.130	0.00	0.00	0.00	2.67
276	277	4.045636	AGTTCTTCAAAAGCAACGCATT	57.954	36.364	0.00	0.00	0.00	3.56
277	278	3.715628	AGTTCTTCAAAAGCAACGCAT	57.284	38.095	0.00	0.00	0.00	4.73
278	279	3.502191	AAGTTCTTCAAAAGCAACGCA	57.498	38.095	0.00	0.00	0.00	5.24
279	280	4.105486	AGAAAGTTCTTCAAAAGCAACGC	58.895	39.130	0.00	0.00	32.55	4.84
280	281	4.434588	CGAGAAAGTTCTTCAAAAGCAACG	59.565	41.667	0.00	0.00	37.73	4.10
281	282	5.332707	ACGAGAAAGTTCTTCAAAAGCAAC	58.667	37.500	0.00	0.00	37.73	4.17
282	283	5.560966	ACGAGAAAGTTCTTCAAAAGCAA	57.439	34.783	0.00	0.00	37.73	3.91
283	284	5.277345	GCTACGAGAAAGTTCTTCAAAAGCA	60.277	40.000	0.00	0.00	37.73	3.91
284	285	5.140872	GCTACGAGAAAGTTCTTCAAAAGC	58.859	41.667	0.00	0.00	37.73	3.51
285	286	5.467063	AGGCTACGAGAAAGTTCTTCAAAAG	59.533	40.000	0.00	0.00	37.73	2.27
286	287	5.236478	CAGGCTACGAGAAAGTTCTTCAAAA	59.764	40.000	0.00	0.00	37.73	2.44
287	288	4.750098	CAGGCTACGAGAAAGTTCTTCAAA	59.250	41.667	0.00	0.00	37.73	2.69
288	289	4.202223	ACAGGCTACGAGAAAGTTCTTCAA	60.202	41.667	0.00	0.00	37.73	2.69
289	290	3.321111	ACAGGCTACGAGAAAGTTCTTCA	59.679	43.478	0.00	0.00	37.73	3.02
290	291	3.675698	CACAGGCTACGAGAAAGTTCTTC	59.324	47.826	0.00	0.00	37.73	2.87
291	292	3.069729	ACACAGGCTACGAGAAAGTTCTT	59.930	43.478	0.00	0.00	37.73	2.52
292	293	2.628657	ACACAGGCTACGAGAAAGTTCT	59.371	45.455	0.00	0.00	41.00	3.01
293	294	2.731976	CACACAGGCTACGAGAAAGTTC	59.268	50.000	0.00	0.00	0.00	3.01
294	295	2.102588	ACACACAGGCTACGAGAAAGTT	59.897	45.455	0.00	0.00	0.00	2.66
295	296	1.687123	ACACACAGGCTACGAGAAAGT	59.313	47.619	0.00	0.00	0.00	2.66
296	297	2.440539	ACACACAGGCTACGAGAAAG	57.559	50.000	0.00	0.00	0.00	2.62
297	298	2.159014	ACAACACACAGGCTACGAGAAA	60.159	45.455	0.00	0.00	0.00	2.52
298	299	1.411246	ACAACACACAGGCTACGAGAA	59.589	47.619	0.00	0.00	0.00	2.87
299	300	1.000607	GACAACACACAGGCTACGAGA	60.001	52.381	0.00	0.00	0.00	4.04
300	301	1.269569	TGACAACACACAGGCTACGAG	60.270	52.381	0.00	0.00	0.00	4.18
301	302	0.747852	TGACAACACACAGGCTACGA	59.252	50.000	0.00	0.00	0.00	3.43
302	303	1.139989	CTGACAACACACAGGCTACG	58.860	55.000	0.00	0.00	0.00	3.51
303	304	1.512926	CCTGACAACACACAGGCTAC	58.487	55.000	0.00	0.00	45.30	3.58
305	306	4.885426	CCTGACAACACACAGGCT	57.115	55.556	0.00	0.00	45.30	4.58
308	309	2.483876	CACTACCCTGACAACACACAG	58.516	52.381	0.00	0.00	0.00	3.66
309	310	1.140052	CCACTACCCTGACAACACACA	59.860	52.381	0.00	0.00	0.00	3.72
310	311	1.140252	ACCACTACCCTGACAACACAC	59.860	52.381	0.00	0.00	0.00	3.82
311	312	1.502690	ACCACTACCCTGACAACACA	58.497	50.000	0.00	0.00	0.00	3.72
312	313	2.158871	TCAACCACTACCCTGACAACAC	60.159	50.000	0.00	0.00	0.00	3.32
313	314	2.120312	TCAACCACTACCCTGACAACA	58.880	47.619	0.00	0.00	0.00	3.33
314	315	2.922740	TCAACCACTACCCTGACAAC	57.077	50.000	0.00	0.00	0.00	3.32
315	316	2.708861	ACATCAACCACTACCCTGACAA	59.291	45.455	0.00	0.00	0.00	3.18
316	317	2.334977	ACATCAACCACTACCCTGACA	58.665	47.619	0.00	0.00	0.00	3.58
317	318	3.074412	CAACATCAACCACTACCCTGAC	58.926	50.000	0.00	0.00	0.00	3.51
318	319	2.708861	ACAACATCAACCACTACCCTGA	59.291	45.455	0.00	0.00	0.00	3.86
319	320	3.140325	ACAACATCAACCACTACCCTG	57.860	47.619	0.00	0.00	0.00	4.45
320	321	3.486383	CAACAACATCAACCACTACCCT	58.514	45.455	0.00	0.00	0.00	4.34
321	322	2.556622	CCAACAACATCAACCACTACCC	59.443	50.000	0.00	0.00	0.00	3.69
322	323	3.219281	ACCAACAACATCAACCACTACC	58.781	45.455	0.00	0.00	0.00	3.18
323	324	3.880490	TGACCAACAACATCAACCACTAC	59.120	43.478	0.00	0.00	0.00	2.73
324	325	3.880490	GTGACCAACAACATCAACCACTA	59.120	43.478	0.00	0.00	0.00	2.74
325	326	2.687935	GTGACCAACAACATCAACCACT	59.312	45.455	0.00	0.00	0.00	4.00
326	327	2.540769	CGTGACCAACAACATCAACCAC	60.541	50.000	0.00	0.00	0.00	4.16
327	328	1.673400	CGTGACCAACAACATCAACCA	59.327	47.619	0.00	0.00	0.00	3.67
328	329	1.001815	CCGTGACCAACAACATCAACC	60.002	52.381	0.00	0.00	0.00	3.77
329	330	1.599419	GCCGTGACCAACAACATCAAC	60.599	52.381	0.00	0.00	0.00	3.18
330	331	0.665835	GCCGTGACCAACAACATCAA	59.334	50.000	0.00	0.00	0.00	2.57
331	332	1.502990	CGCCGTGACCAACAACATCA	61.503	55.000	0.00	0.00	0.00	3.07
332	333	1.206578	CGCCGTGACCAACAACATC	59.793	57.895	0.00	0.00	0.00	3.06
333	334	1.525077	ACGCCGTGACCAACAACAT	60.525	52.632	0.00	0.00	0.00	2.71
334	335	2.125065	ACGCCGTGACCAACAACA	60.125	55.556	0.00	0.00	0.00	3.33
335	336	2.326550	CACGCCGTGACCAACAAC	59.673	61.111	12.85	0.00	35.23	3.32
336	337	3.578272	GCACGCCGTGACCAACAA	61.578	61.111	23.33	0.00	35.23	2.83
339	340	3.166490	TAAGGCACGCCGTGACCAA	62.166	57.895	21.41	4.95	43.69	3.67
340	341	3.583276	CTAAGGCACGCCGTGACCA	62.583	63.158	21.41	7.19	43.69	4.02
341	342	2.573609	ATCTAAGGCACGCCGTGACC	62.574	60.000	21.41	19.82	43.69	4.02
342	343	1.146358	GATCTAAGGCACGCCGTGAC	61.146	60.000	23.33	20.31	42.83	3.67
343	344	1.141019	GATCTAAGGCACGCCGTGA	59.859	57.895	23.33	0.00	41.95	4.35
344	345	0.460284	AAGATCTAAGGCACGCCGTG	60.460	55.000	13.95	13.95	41.95	4.94
345	346	0.460284	CAAGATCTAAGGCACGCCGT	60.460	55.000	1.61	1.44	41.95	5.68
346	347	0.460284	ACAAGATCTAAGGCACGCCG	60.460	55.000	1.61	0.00	41.95	6.46
347	348	1.739067	AACAAGATCTAAGGCACGCC	58.261	50.000	0.00	0.00	0.00	5.68
348	349	3.831715	AAAACAAGATCTAAGGCACGC	57.168	42.857	0.00	0.00	0.00	5.34
390	391	2.230992	CGAGGATGAACATGGCCAAAAA	59.769	45.455	10.96	0.00	0.00	1.94
391	392	1.818060	CGAGGATGAACATGGCCAAAA	59.182	47.619	10.96	0.00	0.00	2.44
392	393	1.004161	TCGAGGATGAACATGGCCAAA	59.996	47.619	10.96	0.00	0.00	3.28
393	394	0.617935	TCGAGGATGAACATGGCCAA	59.382	50.000	10.96	0.00	0.00	4.52
394	395	0.839277	ATCGAGGATGAACATGGCCA	59.161	50.000	8.56	8.56	0.00	5.36
395	396	1.233019	CATCGAGGATGAACATGGCC	58.767	55.000	0.00	0.00	42.09	5.36
396	397	0.590195	GCATCGAGGATGAACATGGC	59.410	55.000	0.00	0.00	42.09	4.40
397	398	2.251409	AGCATCGAGGATGAACATGG	57.749	50.000	0.00	0.00	42.09	3.66
398	399	3.200483	TGAAGCATCGAGGATGAACATG	58.800	45.455	0.00	0.00	42.09	3.21
399	400	3.548745	TGAAGCATCGAGGATGAACAT	57.451	42.857	0.00	0.00	42.09	2.71
400	401	3.264947	CTTGAAGCATCGAGGATGAACA	58.735	45.455	0.00	0.00	42.09	3.18
401	402	3.265791	ACTTGAAGCATCGAGGATGAAC	58.734	45.455	10.82	0.00	42.09	3.18
402	403	3.616956	ACTTGAAGCATCGAGGATGAA	57.383	42.857	10.82	0.00	42.09	2.57
403	404	3.055891	TCAACTTGAAGCATCGAGGATGA	60.056	43.478	10.82	10.90	42.09	2.92
404	405	3.264947	TCAACTTGAAGCATCGAGGATG	58.735	45.455	10.82	8.97	40.84	3.51
405	406	3.616956	TCAACTTGAAGCATCGAGGAT	57.383	42.857	10.82	0.00	40.84	3.24
406	407	3.055891	TGATCAACTTGAAGCATCGAGGA	60.056	43.478	10.82	0.03	40.84	3.71
407	408	3.063180	GTGATCAACTTGAAGCATCGAGG	59.937	47.826	10.82	0.00	40.84	4.63
408	409	3.241900	CGTGATCAACTTGAAGCATCGAG	60.242	47.826	4.61	4.61	42.06	4.04
409	410	2.667969	CGTGATCAACTTGAAGCATCGA	59.332	45.455	0.00	0.00	0.00	3.59
410	411	2.222886	CCGTGATCAACTTGAAGCATCG	60.223	50.000	0.00	4.90	0.00	3.84
411	412	2.744202	ACCGTGATCAACTTGAAGCATC	59.256	45.455	0.00	0.00	0.00	3.91
412	413	2.485426	CACCGTGATCAACTTGAAGCAT	59.515	45.455	0.00	0.00	0.00	3.79
413	414	1.872952	CACCGTGATCAACTTGAAGCA	59.127	47.619	0.00	0.00	0.00	3.91
414	415	1.873591	ACACCGTGATCAACTTGAAGC	59.126	47.619	5.28	0.00	0.00	3.86
415	416	3.312421	ACAACACCGTGATCAACTTGAAG	59.688	43.478	5.28	0.00	0.00	3.02
416	417	3.064682	CACAACACCGTGATCAACTTGAA	59.935	43.478	5.28	0.00	39.34	2.69
417	418	2.611751	CACAACACCGTGATCAACTTGA	59.388	45.455	5.28	0.00	39.34	3.02
418	419	2.354510	ACACAACACCGTGATCAACTTG	59.645	45.455	5.28	0.72	39.34	3.16
419	420	2.639065	ACACAACACCGTGATCAACTT	58.361	42.857	5.28	0.00	39.34	2.66
420	421	2.325583	ACACAACACCGTGATCAACT	57.674	45.000	5.28	0.00	39.34	3.16
421	422	2.612212	AGAACACAACACCGTGATCAAC	59.388	45.455	5.28	0.00	40.18	3.18
422	423	2.912771	AGAACACAACACCGTGATCAA	58.087	42.857	5.28	0.00	40.18	2.57
423	424	2.611751	CAAGAACACAACACCGTGATCA	59.388	45.455	5.28	0.00	40.18	2.92
424	425	2.602217	GCAAGAACACAACACCGTGATC	60.602	50.000	5.28	0.00	39.34	2.92
425	426	1.333619	GCAAGAACACAACACCGTGAT	59.666	47.619	5.28	0.00	39.34	3.06
426	427	0.730265	GCAAGAACACAACACCGTGA	59.270	50.000	5.28	0.00	39.34	4.35
427	428	0.449786	TGCAAGAACACAACACCGTG	59.550	50.000	0.00	0.00	42.81	4.94
428	429	0.732571	CTGCAAGAACACAACACCGT	59.267	50.000	0.00	0.00	34.07	4.83
429	430	1.013596	TCTGCAAGAACACAACACCG	58.986	50.000	0.00	0.00	42.31	4.94
440	441	1.476845	TACACCCGGCTTCTGCAAGA	61.477	55.000	0.00	0.00	44.68	3.02
441	442	1.003839	TACACCCGGCTTCTGCAAG	60.004	57.895	0.00	0.00	41.91	4.01
442	443	1.302192	GTACACCCGGCTTCTGCAA	60.302	57.895	0.00	0.00	41.91	4.08
443	444	1.764571	AAGTACACCCGGCTTCTGCA	61.765	55.000	0.00	0.00	41.91	4.41
444	445	1.003718	AAGTACACCCGGCTTCTGC	60.004	57.895	0.00	0.00	38.76	4.26
445	446	0.320374	TCAAGTACACCCGGCTTCTG	59.680	55.000	0.00	0.00	0.00	3.02
446	447	1.276622	ATCAAGTACACCCGGCTTCT	58.723	50.000	0.00	0.00	0.00	2.85
447	448	2.973694	TATCAAGTACACCCGGCTTC	57.026	50.000	0.00	0.00	0.00	3.86
448	449	3.926058	AATATCAAGTACACCCGGCTT	57.074	42.857	0.00	0.00	0.00	4.35
449	450	5.362105	TTTAATATCAAGTACACCCGGCT	57.638	39.130	0.00	0.00	0.00	5.52
450	451	6.628919	AATTTAATATCAAGTACACCCGGC	57.371	37.500	0.00	0.00	0.00	6.13
451	452	8.897872	AGTAATTTAATATCAAGTACACCCGG	57.102	34.615	0.00	0.00	29.07	5.73
498	499	9.706691	TCAAGAGTCGAGTTCAATAACTATTTT	57.293	29.630	0.00	0.00	46.09	1.82
499	500	9.877178	ATCAAGAGTCGAGTTCAATAACTATTT	57.123	29.630	0.00	0.00	46.09	1.40
500	501	9.522804	GATCAAGAGTCGAGTTCAATAACTATT	57.477	33.333	0.00	0.00	46.09	1.73
501	502	7.858382	CGATCAAGAGTCGAGTTCAATAACTAT	59.142	37.037	0.00	0.00	46.09	2.12
502	503	7.148289	ACGATCAAGAGTCGAGTTCAATAACTA	60.148	37.037	2.28	0.00	46.09	2.24
504	505	5.800941	ACGATCAAGAGTCGAGTTCAATAAC	59.199	40.000	2.28	0.00	41.40	1.89
505	506	5.950883	ACGATCAAGAGTCGAGTTCAATAA	58.049	37.500	2.28	0.00	41.40	1.40
506	507	5.562506	ACGATCAAGAGTCGAGTTCAATA	57.437	39.130	2.28	0.00	41.40	1.90
507	508	4.442375	ACGATCAAGAGTCGAGTTCAAT	57.558	40.909	2.28	0.00	41.40	2.57
508	509	3.917329	ACGATCAAGAGTCGAGTTCAA	57.083	42.857	2.28	0.00	41.40	2.69
509	510	3.917329	AACGATCAAGAGTCGAGTTCA	57.083	42.857	2.28	0.00	41.40	3.18
510	511	4.227538	TGAAACGATCAAGAGTCGAGTTC	58.772	43.478	2.28	6.25	41.40	3.01
511	512	4.238761	TGAAACGATCAAGAGTCGAGTT	57.761	40.909	2.28	0.00	41.40	3.01
512	513	3.917329	TGAAACGATCAAGAGTCGAGT	57.083	42.857	2.28	0.00	41.40	4.18
533	534	0.030603	TGGAACCTTGGGCCCTTTTT	60.031	50.000	25.70	10.87	0.00	1.94
534	535	0.762842	GTGGAACCTTGGGCCCTTTT	60.763	55.000	25.70	10.48	0.00	2.27
535	536	1.152333	GTGGAACCTTGGGCCCTTT	60.152	57.895	25.70	10.87	0.00	3.11
536	537	2.526110	GTGGAACCTTGGGCCCTT	59.474	61.111	25.70	8.87	0.00	3.95
537	538	3.966543	CGTGGAACCTTGGGCCCT	61.967	66.667	25.70	0.15	0.00	5.19
538	539	3.802852	AACGTGGAACCTTGGGCCC	62.803	63.158	17.59	17.59	0.00	5.80
539	540	2.203437	AACGTGGAACCTTGGGCC	60.203	61.111	0.00	0.00	0.00	5.80
540	541	2.561037	CCAACGTGGAACCTTGGGC	61.561	63.158	0.00	0.00	45.52	5.36
541	542	3.758172	CCAACGTGGAACCTTGGG	58.242	61.111	0.00	0.00	45.52	4.12
543	544	2.561037	GGGCCAACGTGGAACCTTG	61.561	63.158	4.39	0.00	40.96	3.61
544	545	2.203437	GGGCCAACGTGGAACCTT	60.203	61.111	4.39	0.00	40.96	3.50
545	546	4.636435	CGGGCCAACGTGGAACCT	62.636	66.667	4.39	0.00	40.96	3.50
548	549	2.749706	TATTGCGGGCCAACGTGGAA	62.750	55.000	4.39	0.00	40.96	3.53
549	550	2.544590	ATATTGCGGGCCAACGTGGA	62.545	55.000	4.39	0.00	40.96	4.02
550	551	0.816018	TATATTGCGGGCCAACGTGG	60.816	55.000	4.39	0.00	41.55	4.94
551	552	1.018148	TTATATTGCGGGCCAACGTG	58.982	50.000	4.39	0.00	35.99	4.49
552	553	1.752683	TTTATATTGCGGGCCAACGT	58.247	45.000	4.39	0.00	35.99	3.99
553	554	2.356382	TCTTTTATATTGCGGGCCAACG	59.644	45.455	4.39	0.00	35.99	4.10
554	555	3.129638	TGTCTTTTATATTGCGGGCCAAC	59.870	43.478	4.39	0.00	35.99	3.77
555	556	3.129638	GTGTCTTTTATATTGCGGGCCAA	59.870	43.478	4.39	0.00	37.94	4.52
556	557	2.685897	GTGTCTTTTATATTGCGGGCCA	59.314	45.455	4.39	0.00	0.00	5.36
557	558	2.949644	AGTGTCTTTTATATTGCGGGCC	59.050	45.455	0.00	0.00	0.00	5.80
558	559	5.744666	TTAGTGTCTTTTATATTGCGGGC	57.255	39.130	0.00	0.00	0.00	6.13
569	570	9.476202	GGACTTGCATTATTTTTAGTGTCTTTT	57.524	29.630	0.00	0.00	0.00	2.27
570	571	8.637986	TGGACTTGCATTATTTTTAGTGTCTTT	58.362	29.630	0.00	0.00	0.00	2.52
571	572	8.177119	TGGACTTGCATTATTTTTAGTGTCTT	57.823	30.769	0.00	0.00	0.00	3.01
572	573	7.759489	TGGACTTGCATTATTTTTAGTGTCT	57.241	32.000	0.00	0.00	0.00	3.41
573	574	8.462016	AGATGGACTTGCATTATTTTTAGTGTC	58.538	33.333	0.00	0.00	0.00	3.67
574	575	8.353423	AGATGGACTTGCATTATTTTTAGTGT	57.647	30.769	0.00	0.00	0.00	3.55
591	592	4.322049	CCAGAACGAAGTACAAGATGGACT	60.322	45.833	0.00	0.00	45.16	3.85
592	593	3.927142	CCAGAACGAAGTACAAGATGGAC	59.073	47.826	0.00	0.00	45.00	4.02
593	594	3.616560	GCCAGAACGAAGTACAAGATGGA	60.617	47.826	0.00	0.00	45.00	3.41
594	595	2.673368	GCCAGAACGAAGTACAAGATGG	59.327	50.000	0.00	0.00	45.00	3.51
595	596	2.673368	GGCCAGAACGAAGTACAAGATG	59.327	50.000	0.00	0.00	45.00	2.90
596	597	2.354805	GGGCCAGAACGAAGTACAAGAT	60.355	50.000	4.39	0.00	45.00	2.40
597	598	1.001633	GGGCCAGAACGAAGTACAAGA	59.998	52.381	4.39	0.00	45.00	3.02
598	599	1.002087	AGGGCCAGAACGAAGTACAAG	59.998	52.381	6.18	0.00	45.00	3.16
599	600	1.053424	AGGGCCAGAACGAAGTACAA	58.947	50.000	6.18	0.00	45.00	2.41
600	601	1.001633	GAAGGGCCAGAACGAAGTACA	59.998	52.381	6.18	0.00	45.00	2.90
601	602	1.001633	TGAAGGGCCAGAACGAAGTAC	59.998	52.381	6.18	0.00	45.00	2.73
602	603	1.275291	CTGAAGGGCCAGAACGAAGTA	59.725	52.381	6.18	0.00	45.00	2.24
604	605	0.674895	CCTGAAGGGCCAGAACGAAG	60.675	60.000	6.18	0.00	36.29	3.79
605	606	1.374947	CCTGAAGGGCCAGAACGAA	59.625	57.895	6.18	0.00	36.29	3.85
606	607	3.068881	CCTGAAGGGCCAGAACGA	58.931	61.111	6.18	0.00	36.29	3.85
615	616	0.554792	ATCAATCTGGGCCTGAAGGG	59.445	55.000	17.53	9.66	35.18	3.95
616	617	1.813092	CGATCAATCTGGGCCTGAAGG	60.813	57.143	17.53	12.04	38.53	3.46
617	618	1.590932	CGATCAATCTGGGCCTGAAG	58.409	55.000	17.53	12.71	0.00	3.02
618	619	0.181114	CCGATCAATCTGGGCCTGAA	59.819	55.000	17.53	1.22	0.00	3.02
619	620	1.832219	CCGATCAATCTGGGCCTGA	59.168	57.895	15.94	15.94	0.00	3.86
620	621	1.895707	GCCGATCAATCTGGGCCTG	60.896	63.158	4.53	4.06	39.67	4.85
621	622	1.925285	TTGCCGATCAATCTGGGCCT	61.925	55.000	4.53	0.00	44.96	5.19
622	623	1.037030	TTTGCCGATCAATCTGGGCC	61.037	55.000	0.00	0.00	44.96	5.80
623	624	0.101219	GTTTGCCGATCAATCTGGGC	59.899	55.000	0.50	0.50	45.76	5.36
624	625	1.402968	CTGTTTGCCGATCAATCTGGG	59.597	52.381	0.00	0.00	34.12	4.45
625	626	1.402968	CCTGTTTGCCGATCAATCTGG	59.597	52.381	0.00	0.00	37.24	3.86
626	627	2.086869	ACCTGTTTGCCGATCAATCTG	58.913	47.619	0.00	0.00	34.12	2.90
627	628	2.359900	GACCTGTTTGCCGATCAATCT	58.640	47.619	0.00	0.00	34.12	2.40
628	629	1.062587	CGACCTGTTTGCCGATCAATC	59.937	52.381	0.00	0.00	34.12	2.67
629	630	1.086696	CGACCTGTTTGCCGATCAAT	58.913	50.000	0.00	0.00	34.12	2.57
630	631	0.034198	TCGACCTGTTTGCCGATCAA	59.966	50.000	0.00	0.00	0.00	2.57
631	632	0.669318	GTCGACCTGTTTGCCGATCA	60.669	55.000	3.51	0.00	33.47	2.92
632	633	1.359459	GGTCGACCTGTTTGCCGATC	61.359	60.000	27.64	0.00	33.47	3.69
633	634	1.375523	GGTCGACCTGTTTGCCGAT	60.376	57.895	27.64	0.00	33.47	4.18
634	635	2.029964	GGTCGACCTGTTTGCCGA	59.970	61.111	27.64	0.00	0.00	5.54
635	636	3.411351	CGGTCGACCTGTTTGCCG	61.411	66.667	30.92	12.61	0.00	5.69
636	637	3.047877	CCGGTCGACCTGTTTGCC	61.048	66.667	30.92	3.55	0.00	4.52
637	638	3.047877	CCCGGTCGACCTGTTTGC	61.048	66.667	30.92	4.32	0.00	3.68
638	639	1.226030	GAACCCGGTCGACCTGTTTG	61.226	60.000	30.92	15.58	31.58	2.93
639	640	1.070275	GAACCCGGTCGACCTGTTT	59.930	57.895	30.92	20.23	31.58	2.83
640	641	1.688269	TTGAACCCGGTCGACCTGTT	61.688	55.000	30.92	29.71	33.30	3.16
641	642	2.135581	TTGAACCCGGTCGACCTGT	61.136	57.895	30.92	23.96	0.00	4.00
642	643	1.666872	GTTGAACCCGGTCGACCTG	60.667	63.158	30.92	24.70	0.00	4.00
643	644	1.405272	AAGTTGAACCCGGTCGACCT	61.405	55.000	30.92	13.63	32.99	3.85
644	645	0.533531	AAAGTTGAACCCGGTCGACC	60.534	55.000	25.28	25.28	32.99	4.79
645	646	0.584876	CAAAGTTGAACCCGGTCGAC	59.415	55.000	7.13	7.13	32.76	4.20
646	647	0.464870	TCAAAGTTGAACCCGGTCGA	59.535	50.000	0.00	0.00	33.55	4.20
647	648	1.263217	CTTCAAAGTTGAACCCGGTCG	59.737	52.381	0.00	0.00	41.88	4.79
648	649	1.001706	GCTTCAAAGTTGAACCCGGTC	60.002	52.381	0.00	0.00	41.88	4.79
649	650	1.029681	GCTTCAAAGTTGAACCCGGT	58.970	50.000	0.00	0.00	41.88	5.28
650	651	1.266989	GAGCTTCAAAGTTGAACCCGG	59.733	52.381	2.32	0.00	41.88	5.73
651	652	1.946768	TGAGCTTCAAAGTTGAACCCG	59.053	47.619	2.32	0.00	41.88	5.28
652	653	5.705609	TTATGAGCTTCAAAGTTGAACCC	57.294	39.130	2.32	0.00	41.88	4.11
653	654	7.150783	AGATTATGAGCTTCAAAGTTGAACC	57.849	36.000	2.32	0.00	41.88	3.62
654	655	6.958193	CGAGATTATGAGCTTCAAAGTTGAAC	59.042	38.462	2.32	0.00	41.88	3.18
655	656	6.402550	GCGAGATTATGAGCTTCAAAGTTGAA	60.403	38.462	6.33	6.33	44.31	2.69
656	657	5.063944	GCGAGATTATGAGCTTCAAAGTTGA	59.936	40.000	0.00	0.00	34.92	3.18
657	658	5.261661	GCGAGATTATGAGCTTCAAAGTTG	58.738	41.667	0.00	0.00	0.00	3.16
658	659	4.333926	GGCGAGATTATGAGCTTCAAAGTT	59.666	41.667	0.00	0.00	0.00	2.66
659	660	3.873952	GGCGAGATTATGAGCTTCAAAGT	59.126	43.478	0.00	0.00	0.00	2.66
660	661	3.873361	TGGCGAGATTATGAGCTTCAAAG	59.127	43.478	0.00	0.00	0.00	2.77
661	662	3.872696	TGGCGAGATTATGAGCTTCAAA	58.127	40.909	0.00	0.00	0.00	2.69
662	663	3.541996	TGGCGAGATTATGAGCTTCAA	57.458	42.857	0.00	0.00	0.00	2.69
663	664	3.541996	TTGGCGAGATTATGAGCTTCA	57.458	42.857	0.00	0.00	0.00	3.02
664	665	5.429957	AATTTGGCGAGATTATGAGCTTC	57.570	39.130	0.00	0.00	0.00	3.86
665	666	5.585390	CAAATTTGGCGAGATTATGAGCTT	58.415	37.500	10.49	0.00	0.00	3.74
666	667	4.498682	GCAAATTTGGCGAGATTATGAGCT	60.499	41.667	19.47	0.00	0.00	4.09
667	668	3.732721	GCAAATTTGGCGAGATTATGAGC	59.267	43.478	19.47	0.00	0.00	4.26
668	669	5.179045	AGCAAATTTGGCGAGATTATGAG	57.821	39.130	19.47	0.00	36.08	2.90
669	670	5.342433	CAAGCAAATTTGGCGAGATTATGA	58.658	37.500	19.47	0.00	36.08	2.15
670	671	4.026310	GCAAGCAAATTTGGCGAGATTATG	60.026	41.667	19.47	6.77	36.08	1.90
671	672	4.114794	GCAAGCAAATTTGGCGAGATTAT	58.885	39.130	19.47	0.00	36.08	1.28
672	673	3.056962	TGCAAGCAAATTTGGCGAGATTA	60.057	39.130	19.47	0.00	36.08	1.75
673	674	2.288948	TGCAAGCAAATTTGGCGAGATT	60.289	40.909	19.47	0.00	36.08	2.40
674	675	1.273048	TGCAAGCAAATTTGGCGAGAT	59.727	42.857	19.47	0.00	36.08	2.75
675	676	0.672889	TGCAAGCAAATTTGGCGAGA	59.327	45.000	19.47	0.00	36.08	4.04
676	677	1.192980	GTTGCAAGCAAATTTGGCGAG	59.807	47.619	19.47	10.36	37.70	5.03
677	678	1.202510	AGTTGCAAGCAAATTTGGCGA	60.203	42.857	19.47	11.30	37.70	5.54
678	679	1.219646	AGTTGCAAGCAAATTTGGCG	58.780	45.000	19.47	0.00	37.70	5.69
679	680	4.057432	TCTAAGTTGCAAGCAAATTTGGC	58.943	39.130	22.79	14.33	40.62	4.52
680	681	9.241317	CTATATCTAAGTTGCAAGCAAATTTGG	57.759	33.333	22.79	16.29	40.62	3.28
681	682	9.241317	CCTATATCTAAGTTGCAAGCAAATTTG	57.759	33.333	22.79	20.36	40.62	2.32
682	683	8.971073	ACCTATATCTAAGTTGCAAGCAAATTT	58.029	29.630	22.79	15.60	40.62	1.82
683	684	8.525290	ACCTATATCTAAGTTGCAAGCAAATT	57.475	30.769	21.61	21.61	44.63	1.82
684	685	9.277783	CTACCTATATCTAAGTTGCAAGCAAAT	57.722	33.333	9.32	5.37	37.70	2.32
685	686	8.482943	TCTACCTATATCTAAGTTGCAAGCAAA	58.517	33.333	9.32	0.00	37.70	3.68
686	687	8.018537	TCTACCTATATCTAAGTTGCAAGCAA	57.981	34.615	0.00	2.89	0.00	3.91
687	688	7.505923	TCTCTACCTATATCTAAGTTGCAAGCA	59.494	37.037	0.00	0.00	0.00	3.91
688	689	7.887381	TCTCTACCTATATCTAAGTTGCAAGC	58.113	38.462	0.00	0.00	0.00	4.01
689	690	9.853555	CATCTCTACCTATATCTAAGTTGCAAG	57.146	37.037	0.00	0.00	0.00	4.01
690	691	9.368416	ACATCTCTACCTATATCTAAGTTGCAA	57.632	33.333	0.00	0.00	0.00	4.08
691	692	8.941995	ACATCTCTACCTATATCTAAGTTGCA	57.058	34.615	0.00	0.00	0.00	4.08
695	696	9.884814	ACCAAACATCTCTACCTATATCTAAGT	57.115	33.333	0.00	0.00	0.00	2.24
698	699	9.090103	CCAACCAAACATCTCTACCTATATCTA	57.910	37.037	0.00	0.00	0.00	1.98
699	700	7.016661	CCCAACCAAACATCTCTACCTATATCT	59.983	40.741	0.00	0.00	0.00	1.98
700	701	7.162082	CCCAACCAAACATCTCTACCTATATC	58.838	42.308	0.00	0.00	0.00	1.63
701	702	6.465894	GCCCAACCAAACATCTCTACCTATAT	60.466	42.308	0.00	0.00	0.00	0.86
702	703	5.163237	GCCCAACCAAACATCTCTACCTATA	60.163	44.000	0.00	0.00	0.00	1.31
703	704	4.385310	GCCCAACCAAACATCTCTACCTAT	60.385	45.833	0.00	0.00	0.00	2.57
704	705	3.054655	GCCCAACCAAACATCTCTACCTA	60.055	47.826	0.00	0.00	0.00	3.08
705	706	2.290960	GCCCAACCAAACATCTCTACCT	60.291	50.000	0.00	0.00	0.00	3.08
706	707	2.092323	GCCCAACCAAACATCTCTACC	58.908	52.381	0.00	0.00	0.00	3.18
707	708	2.790433	TGCCCAACCAAACATCTCTAC	58.210	47.619	0.00	0.00	0.00	2.59
708	709	3.517296	TTGCCCAACCAAACATCTCTA	57.483	42.857	0.00	0.00	0.00	2.43
709	710	2.380064	TTGCCCAACCAAACATCTCT	57.620	45.000	0.00	0.00	0.00	3.10
710	711	2.094026	GGATTGCCCAACCAAACATCTC	60.094	50.000	0.00	0.00	34.14	2.75
711	712	1.901833	GGATTGCCCAACCAAACATCT	59.098	47.619	0.00	0.00	34.14	2.90
712	713	1.622811	TGGATTGCCCAACCAAACATC	59.377	47.619	0.00	0.00	43.29	3.06
713	714	1.727062	TGGATTGCCCAACCAAACAT	58.273	45.000	0.00	0.00	43.29	2.71
714	715	3.230608	TGGATTGCCCAACCAAACA	57.769	47.368	0.00	0.00	43.29	2.83
722	723	0.032615	GGGGTTATGTGGATTGCCCA	60.033	55.000	0.00	0.00	44.25	5.36
723	724	1.106944	CGGGGTTATGTGGATTGCCC	61.107	60.000	0.00	0.00	35.52	5.36
724	725	0.106918	TCGGGGTTATGTGGATTGCC	60.107	55.000	0.00	0.00	0.00	4.52
725	726	1.880027	GATCGGGGTTATGTGGATTGC	59.120	52.381	0.00	0.00	0.00	3.56
726	727	3.492102	AGATCGGGGTTATGTGGATTG	57.508	47.619	0.00	0.00	0.00	2.67
727	728	3.202151	ACAAGATCGGGGTTATGTGGATT	59.798	43.478	0.00	0.00	0.00	3.01
728	729	2.777692	ACAAGATCGGGGTTATGTGGAT	59.222	45.455	0.00	0.00	0.00	3.41
729	730	2.193127	ACAAGATCGGGGTTATGTGGA	58.807	47.619	0.00	0.00	0.00	4.02
730	731	2.710096	ACAAGATCGGGGTTATGTGG	57.290	50.000	0.00	0.00	0.00	4.17
731	732	4.131649	TGTACAAGATCGGGGTTATGTG	57.868	45.455	0.00	0.00	0.00	3.21
732	733	6.269077	TCATATGTACAAGATCGGGGTTATGT	59.731	38.462	0.00	0.00	0.00	2.29
733	734	6.590292	GTCATATGTACAAGATCGGGGTTATG	59.410	42.308	0.00	0.00	0.00	1.90
734	735	6.269077	TGTCATATGTACAAGATCGGGGTTAT	59.731	38.462	0.00	0.00	0.00	1.89
735	736	5.599242	TGTCATATGTACAAGATCGGGGTTA	59.401	40.000	0.00	0.00	0.00	2.85
736	737	4.407621	TGTCATATGTACAAGATCGGGGTT	59.592	41.667	0.00	0.00	0.00	4.11
737	738	3.964688	TGTCATATGTACAAGATCGGGGT	59.035	43.478	0.00	0.00	0.00	4.95
738	739	4.600692	TGTCATATGTACAAGATCGGGG	57.399	45.455	0.00	0.00	0.00	5.73
739	740	6.566564	GCAATTGTCATATGTACAAGATCGGG	60.567	42.308	18.86	10.12	40.00	5.14
740	741	6.203530	AGCAATTGTCATATGTACAAGATCGG	59.796	38.462	18.86	11.19	40.00	4.18
741	742	7.182361	AGCAATTGTCATATGTACAAGATCG	57.818	36.000	18.86	11.69	40.00	3.69
742	743	8.834465	AGAAGCAATTGTCATATGTACAAGATC	58.166	33.333	18.86	13.79	40.00	2.75
743	744	8.618677	CAGAAGCAATTGTCATATGTACAAGAT	58.381	33.333	18.86	11.67	40.00	2.40
744	745	7.823799	TCAGAAGCAATTGTCATATGTACAAGA	59.176	33.333	18.86	0.00	40.00	3.02
745	746	7.977904	TCAGAAGCAATTGTCATATGTACAAG	58.022	34.615	18.86	11.58	40.00	3.16
746	747	7.920160	TCAGAAGCAATTGTCATATGTACAA	57.080	32.000	17.35	17.35	40.85	2.41
747	748	7.920160	TTCAGAAGCAATTGTCATATGTACA	57.080	32.000	7.40	0.00	0.00	2.90
755	756	9.357652	GCTTTATTTATTCAGAAGCAATTGTCA	57.642	29.630	7.40	0.00	41.64	3.58
756	757	9.357652	TGCTTTATTTATTCAGAAGCAATTGTC	57.642	29.630	7.40	0.00	46.66	3.18
763	764	4.972440	CGCCTGCTTTATTTATTCAGAAGC	59.028	41.667	0.00	0.00	42.19	3.86
764	765	6.258727	TCTCGCCTGCTTTATTTATTCAGAAG	59.741	38.462	0.00	0.00	0.00	2.85
765	766	6.112734	TCTCGCCTGCTTTATTTATTCAGAA	58.887	36.000	0.00	0.00	0.00	3.02
766	767	5.670485	TCTCGCCTGCTTTATTTATTCAGA	58.330	37.500	0.00	0.00	0.00	3.27
767	768	5.991328	TCTCGCCTGCTTTATTTATTCAG	57.009	39.130	0.00	0.00	0.00	3.02
768	769	6.942532	AATCTCGCCTGCTTTATTTATTCA	57.057	33.333	0.00	0.00	0.00	2.57
769	770	7.643579	AGAAATCTCGCCTGCTTTATTTATTC	58.356	34.615	0.00	0.00	0.00	1.75
770	771	7.573968	AGAAATCTCGCCTGCTTTATTTATT	57.426	32.000	0.00	0.00	0.00	1.40
771	772	8.677148	TTAGAAATCTCGCCTGCTTTATTTAT	57.323	30.769	0.00	0.00	0.00	1.40
772	773	8.500753	TTTAGAAATCTCGCCTGCTTTATTTA	57.499	30.769	0.00	0.00	0.00	1.40
773	774	7.391148	TTTAGAAATCTCGCCTGCTTTATTT	57.609	32.000	0.00	0.00	0.00	1.40
774	775	7.391148	TTTTAGAAATCTCGCCTGCTTTATT	57.609	32.000	0.00	0.00	0.00	1.40
775	776	7.391148	TTTTTAGAAATCTCGCCTGCTTTAT	57.609	32.000	0.00	0.00	0.00	1.40
776	777	6.811253	TTTTTAGAAATCTCGCCTGCTTTA	57.189	33.333	0.00	0.00	0.00	1.85
777	778	5.705609	TTTTTAGAAATCTCGCCTGCTTT	57.294	34.783	0.00	0.00	0.00	3.51
801	802	1.135024	CCTGTGCTGTGCTGTGTTTTT	60.135	47.619	0.00	0.00	0.00	1.94
802	803	0.457035	CCTGTGCTGTGCTGTGTTTT	59.543	50.000	0.00	0.00	0.00	2.43
803	804	0.394216	TCCTGTGCTGTGCTGTGTTT	60.394	50.000	0.00	0.00	0.00	2.83
804	805	1.097547	GTCCTGTGCTGTGCTGTGTT	61.098	55.000	0.00	0.00	0.00	3.32
805	806	1.524621	GTCCTGTGCTGTGCTGTGT	60.525	57.895	0.00	0.00	0.00	3.72
806	807	2.256591	GGTCCTGTGCTGTGCTGTG	61.257	63.158	0.00	0.00	0.00	3.66
807	808	2.111878	GGTCCTGTGCTGTGCTGT	59.888	61.111	0.00	0.00	0.00	4.40
808	809	2.111669	TGGTCCTGTGCTGTGCTG	59.888	61.111	0.00	0.00	0.00	4.41
809	810	2.111878	GTGGTCCTGTGCTGTGCT	59.888	61.111	0.00	0.00	0.00	4.40
810	811	1.383456	TTTGTGGTCCTGTGCTGTGC	61.383	55.000	0.00	0.00	0.00	4.57
902	942	1.135139	CTGATCTGATCGGACACGGTT	59.865	52.381	19.53	0.00	41.39	4.44
916	956	1.299976	GAAACCCGTGGCCTGATCT	59.700	57.895	3.32	0.00	0.00	2.75
927	975	2.506438	GGAGAGCGACGAAACCCG	60.506	66.667	0.00	0.00	45.44	5.28
1068	1141	0.610174	TTGTCTTGATCTGCTCGGCT	59.390	50.000	0.00	0.00	0.00	5.52
1086	1159	2.660552	CTCCACCGCGTGTTCGTT	60.661	61.111	4.92	0.00	39.49	3.85
1116	1189	3.991051	CTGACACCGTCGGGCAGT	61.991	66.667	17.28	11.06	35.49	4.40
1272	1349	6.537301	CACTATCACGGGATGTTTAGCTTTTA	59.463	38.462	11.33	0.00	34.89	1.52
1276	1353	3.704566	TCACTATCACGGGATGTTTAGCT	59.295	43.478	11.33	0.00	34.89	3.32
1287	1364	5.333645	GCTAATTTGCTGATCACTATCACGG	60.334	44.000	4.53	0.00	37.20	4.94
1288	1365	5.464722	AGCTAATTTGCTGATCACTATCACG	59.535	40.000	13.73	0.00	42.33	4.35
1325	1436	3.512724	CACAAAGGGATTTTCCTGCAGAT	59.487	43.478	17.39	0.00	37.20	2.90
1351	1462	2.362369	CGATGGCACCCCAGAGTCT	61.362	63.158	0.00	0.00	46.24	3.24
1399	1510	1.147600	GTTGAACCGGACACCCAGT	59.852	57.895	9.46	0.00	0.00	4.00
1561	1672	1.372128	GAAGTACACGTCGCCGGTT	60.372	57.895	1.90	0.00	38.78	4.44
2208	3430	7.182206	ACAAGGACAGACACCCTACTAATAAAT	59.818	37.037	0.00	0.00	31.36	1.40
2209	3431	6.499350	ACAAGGACAGACACCCTACTAATAAA	59.501	38.462	0.00	0.00	31.36	1.40
2214	3436	3.075582	AGACAAGGACAGACACCCTACTA	59.924	47.826	0.00	0.00	31.36	1.82
2215	3437	2.158295	AGACAAGGACAGACACCCTACT	60.158	50.000	0.00	0.00	31.36	2.57
2226	3448	4.336889	AAAACTCGATCAGACAAGGACA	57.663	40.909	0.00	0.00	0.00	4.02
2227	3449	4.152580	GGAAAAACTCGATCAGACAAGGAC	59.847	45.833	0.00	0.00	0.00	3.85
2229	3451	4.319177	AGGAAAAACTCGATCAGACAAGG	58.681	43.478	0.00	0.00	0.00	3.61
2230	3452	5.931441	AAGGAAAAACTCGATCAGACAAG	57.069	39.130	0.00	0.00	0.00	3.16
2249	3474	5.095145	TGAATCAGTCTCATCTCCAAAGG	57.905	43.478	0.00	0.00	0.00	3.11
2250	3475	5.732633	ACTGAATCAGTCTCATCTCCAAAG	58.267	41.667	10.56	0.00	41.21	2.77
2251	3476	5.752036	ACTGAATCAGTCTCATCTCCAAA	57.248	39.130	10.56	0.00	41.21	3.28
2252	3477	7.429374	AATACTGAATCAGTCTCATCTCCAA	57.571	36.000	20.25	0.00	41.21	3.53
2253	3478	8.001292	TCTAATACTGAATCAGTCTCATCTCCA	58.999	37.037	20.25	0.00	41.21	3.86
2254	3479	8.296713	GTCTAATACTGAATCAGTCTCATCTCC	58.703	40.741	20.25	0.00	41.21	3.71
2255	3480	9.066892	AGTCTAATACTGAATCAGTCTCATCTC	57.933	37.037	20.25	6.67	41.21	2.75
2256	3481	8.995027	AGTCTAATACTGAATCAGTCTCATCT	57.005	34.615	20.25	9.59	41.21	2.90
2279	3504	9.384764	GCTGACTTAAATCCTTCTTATAACAGT	57.615	33.333	0.00	0.00	0.00	3.55
2280	3505	9.383519	TGCTGACTTAAATCCTTCTTATAACAG	57.616	33.333	0.00	0.00	0.00	3.16
2281	3506	9.162764	GTGCTGACTTAAATCCTTCTTATAACA	57.837	33.333	0.00	0.00	0.00	2.41
2282	3507	9.162764	TGTGCTGACTTAAATCCTTCTTATAAC	57.837	33.333	0.00	0.00	0.00	1.89
2283	3508	9.162764	GTGTGCTGACTTAAATCCTTCTTATAA	57.837	33.333	0.00	0.00	0.00	0.98
2284	3509	8.540388	AGTGTGCTGACTTAAATCCTTCTTATA	58.460	33.333	0.00	0.00	0.00	0.98
2285	3510	7.398024	AGTGTGCTGACTTAAATCCTTCTTAT	58.602	34.615	0.00	0.00	0.00	1.73
2286	3511	6.769512	AGTGTGCTGACTTAAATCCTTCTTA	58.230	36.000	0.00	0.00	0.00	2.10
2287	3512	5.625150	AGTGTGCTGACTTAAATCCTTCTT	58.375	37.500	0.00	0.00	0.00	2.52
2288	3513	5.234466	AGTGTGCTGACTTAAATCCTTCT	57.766	39.130	0.00	0.00	0.00	2.85
2289	3514	5.948992	AAGTGTGCTGACTTAAATCCTTC	57.051	39.130	0.00	0.00	34.29	3.46
2290	3515	9.515226	TTAATAAGTGTGCTGACTTAAATCCTT	57.485	29.630	10.85	5.07	40.85	3.36
2291	3516	9.515226	TTTAATAAGTGTGCTGACTTAAATCCT	57.485	29.630	10.85	0.00	40.85	3.24
2300	3525	9.289303	CCATACAAATTTAATAAGTGTGCTGAC	57.711	33.333	0.00	0.00	0.00	3.51
2301	3526	9.019656	ACCATACAAATTTAATAAGTGTGCTGA	57.980	29.630	0.00	0.00	0.00	4.26
2302	3527	9.638239	AACCATACAAATTTAATAAGTGTGCTG	57.362	29.630	0.00	0.00	0.00	4.41
2312	3537	9.620660	GAAGTCGTGAAACCATACAAATTTAAT	57.379	29.630	0.00	0.00	0.00	1.40
2313	3538	8.077386	GGAAGTCGTGAAACCATACAAATTTAA	58.923	33.333	0.00	0.00	0.00	1.52
2314	3539	7.446013	AGGAAGTCGTGAAACCATACAAATTTA	59.554	33.333	0.00	0.00	0.00	1.40
2315	3540	6.264518	AGGAAGTCGTGAAACCATACAAATTT	59.735	34.615	0.00	0.00	0.00	1.82
2316	3541	5.768164	AGGAAGTCGTGAAACCATACAAATT	59.232	36.000	0.00	0.00	0.00	1.82
2317	3542	5.181245	CAGGAAGTCGTGAAACCATACAAAT	59.819	40.000	0.00	0.00	33.92	2.32
2318	3543	4.513692	CAGGAAGTCGTGAAACCATACAAA	59.486	41.667	0.00	0.00	33.92	2.83
2319	3544	4.062293	CAGGAAGTCGTGAAACCATACAA	58.938	43.478	0.00	0.00	33.92	2.41
2320	3545	3.659786	CAGGAAGTCGTGAAACCATACA	58.340	45.455	0.00	0.00	33.92	2.29
2321	3546	2.415512	GCAGGAAGTCGTGAAACCATAC	59.584	50.000	5.22	0.00	33.92	2.39
2322	3547	2.037902	TGCAGGAAGTCGTGAAACCATA	59.962	45.455	5.22	0.00	33.92	2.74
2323	3548	1.202758	TGCAGGAAGTCGTGAAACCAT	60.203	47.619	5.22	0.00	33.92	3.55
2324	3549	0.179234	TGCAGGAAGTCGTGAAACCA	59.821	50.000	5.22	0.00	33.92	3.67
2325	3550	1.002792	GTTGCAGGAAGTCGTGAAACC	60.003	52.381	12.08	0.00	41.85	3.27
2326	3551	1.332904	CGTTGCAGGAAGTCGTGAAAC	60.333	52.381	12.83	12.83	43.36	2.78
2327	3552	0.934496	CGTTGCAGGAAGTCGTGAAA	59.066	50.000	5.22	0.00	33.92	2.69
2328	3553	0.179094	ACGTTGCAGGAAGTCGTGAA	60.179	50.000	5.22	0.00	33.92	3.18
2329	3554	0.179094	AACGTTGCAGGAAGTCGTGA	60.179	50.000	0.00	0.00	35.00	4.35
2330	3555	0.655733	AAACGTTGCAGGAAGTCGTG	59.344	50.000	0.00	0.00	35.00	4.35
2331	3556	1.329599	GAAAACGTTGCAGGAAGTCGT	59.670	47.619	0.00	0.00	36.31	4.34
2332	3557	1.597663	AGAAAACGTTGCAGGAAGTCG	59.402	47.619	0.00	0.00	0.00	4.18
2333	3558	6.092259	ACATATAGAAAACGTTGCAGGAAGTC	59.908	38.462	0.00	0.00	0.00	3.01
2334	3559	5.938125	ACATATAGAAAACGTTGCAGGAAGT	59.062	36.000	0.00	0.00	0.00	3.01
2335	3560	6.422776	ACATATAGAAAACGTTGCAGGAAG	57.577	37.500	0.00	0.00	0.00	3.46
2336	3561	6.428465	TCAACATATAGAAAACGTTGCAGGAA	59.572	34.615	0.00	0.00	37.47	3.36
2337	3562	5.935206	TCAACATATAGAAAACGTTGCAGGA	59.065	36.000	0.00	0.00	37.47	3.86
2338	3563	6.128282	ACTCAACATATAGAAAACGTTGCAGG	60.128	38.462	0.00	0.00	37.47	4.85
2339	3564	6.831769	ACTCAACATATAGAAAACGTTGCAG	58.168	36.000	0.00	0.00	37.47	4.41
2340	3565	6.795098	ACTCAACATATAGAAAACGTTGCA	57.205	33.333	0.00	0.00	37.47	4.08
2369	3594	7.069085	ACCCTACTCACAAATATACACGTACAT	59.931	37.037	0.00	0.00	0.00	2.29
2441	3666	6.570692	GCACCAGGCACGTATATATAAGTAT	58.429	40.000	10.46	0.00	43.97	2.12
2868	4214	0.037326	GGTGTGATCGAGCTTGACCA	60.037	55.000	5.59	0.00	0.00	4.02
2971	4317	1.361993	GATCATGAGCGCCGAGTCT	59.638	57.895	2.29	0.00	0.00	3.24
2998	4344	1.313772	CGTCGAGGATCATCCACTCT	58.686	55.000	6.42	0.00	39.61	3.24
3045	4391	1.825474	GGAAGAGGTCGTTGGAGATGA	59.175	52.381	0.00	0.00	0.00	2.92
3119	4465	0.108615	CGATTGTCGGTGAAGAGGCT	60.109	55.000	0.00	0.00	36.00	4.58

Based at the University of Bristol with support from BBSRC.

AutoCloner maintained by Alex Coulton.