Multiple sequence alignment - TraesCS5B01G378600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G378600 chr5B 100.000 6123 0 0 1 6123 556946314 556952436 0.000000e+00 11308.0
1 TraesCS5B01G378600 chr5B 88.636 176 12 4 2764 2932 54041313 54041139 2.240000e-49 207.0
2 TraesCS5B01G378600 chr5B 81.250 272 38 10 849 1113 556296154 556296419 2.240000e-49 207.0
3 TraesCS5B01G378600 chr5A 89.495 3265 215 43 2923 6123 573757465 573760665 0.000000e+00 4012.0
4 TraesCS5B01G378600 chr5A 85.459 839 88 18 1613 2443 573755806 573756618 0.000000e+00 843.0
5 TraesCS5B01G378600 chr5A 86.289 547 26 18 815 1349 573754904 573755413 3.230000e-152 549.0
6 TraesCS5B01G378600 chr5A 88.288 111 10 3 2656 2766 573757243 573757350 4.980000e-26 130.0
7 TraesCS5B01G378600 chr5A 94.118 51 3 0 849 899 573676285 573676335 1.830000e-10 78.7
8 TraesCS5B01G378600 chr5D 91.419 2797 161 34 2923 5658 454803519 454806297 0.000000e+00 3762.0
9 TraesCS5B01G378600 chr5D 88.508 1166 105 19 1608 2766 454802261 454803404 0.000000e+00 1384.0
10 TraesCS5B01G378600 chr5D 89.237 511 36 5 859 1356 454801272 454801776 6.740000e-174 621.0
11 TraesCS5B01G378600 chr5D 90.657 289 25 2 5684 5970 454806292 454806580 3.460000e-102 383.0
12 TraesCS5B01G378600 chr2B 95.238 777 34 3 1 777 46072738 46071965 0.000000e+00 1227.0
13 TraesCS5B01G378600 chr2B 90.419 167 10 5 2762 2923 368413575 368413410 1.340000e-51 215.0
14 TraesCS5B01G378600 chr2B 89.286 168 13 3 2764 2926 540306922 540307089 8.040000e-49 206.0
15 TraesCS5B01G378600 chr4A 94.567 773 42 0 6 778 650054646 650055418 0.000000e+00 1195.0
16 TraesCS5B01G378600 chr7A 94.041 772 45 1 12 783 497843001 497842231 0.000000e+00 1170.0
17 TraesCS5B01G378600 chr3A 93.256 771 41 2 9 779 60806684 60807443 0.000000e+00 1125.0
18 TraesCS5B01G378600 chr6D 92.190 781 53 6 1 779 331576600 331575826 0.000000e+00 1098.0
19 TraesCS5B01G378600 chr2D 94.637 634 34 0 2 635 288229636 288229003 0.000000e+00 983.0
20 TraesCS5B01G378600 chr4B 90.329 486 45 2 9 493 634446582 634446098 2.410000e-178 636.0
21 TraesCS5B01G378600 chr4B 86.458 192 16 4 2748 2932 549841742 549841930 1.040000e-47 202.0
22 TraesCS5B01G378600 chr4B 85.938 192 17 4 2748 2932 499224488 499224676 4.840000e-46 196.0
23 TraesCS5B01G378600 chr3B 91.515 165 9 4 2754 2918 736927157 736927316 7.990000e-54 222.0
24 TraesCS5B01G378600 chrUn 86.979 192 15 4 2748 2932 86671303 86671491 2.240000e-49 207.0
25 TraesCS5B01G378600 chr7B 88.636 176 12 3 2764 2932 548034878 548034704 2.240000e-49 207.0
26 TraesCS5B01G378600 chr7B 85.417 192 18 6 2748 2932 309933452 309933640 2.250000e-44 191.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G378600 chr5B 556946314 556952436 6122 False 11308.0 11308 100.00000 1 6123 1 chr5B.!!$F2 6122
1 TraesCS5B01G378600 chr5A 573754904 573760665 5761 False 1383.5 4012 87.38275 815 6123 4 chr5A.!!$F2 5308
2 TraesCS5B01G378600 chr5D 454801272 454806580 5308 False 1537.5 3762 89.95525 859 5970 4 chr5D.!!$F1 5111
3 TraesCS5B01G378600 chr2B 46071965 46072738 773 True 1227.0 1227 95.23800 1 777 1 chr2B.!!$R1 776
4 TraesCS5B01G378600 chr4A 650054646 650055418 772 False 1195.0 1195 94.56700 6 778 1 chr4A.!!$F1 772
5 TraesCS5B01G378600 chr7A 497842231 497843001 770 True 1170.0 1170 94.04100 12 783 1 chr7A.!!$R1 771
6 TraesCS5B01G378600 chr3A 60806684 60807443 759 False 1125.0 1125 93.25600 9 779 1 chr3A.!!$F1 770
7 TraesCS5B01G378600 chr6D 331575826 331576600 774 True 1098.0 1098 92.19000 1 779 1 chr6D.!!$R1 778
8 TraesCS5B01G378600 chr2D 288229003 288229636 633 True 983.0 983 94.63700 2 635 1 chr2D.!!$R1 633

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
119 120 0.108138 GATGTAGCTCTTGCCGGTGT 60.108 55.0 1.90 0.0 40.80 4.16 F
469 471 0.174845 TCAGCTGCATACGGTGTACC 59.825 55.0 9.47 0.0 0.00 3.34 F
2340 2616 0.187117 TGTCCCTTTGCCACATCCAA 59.813 50.0 0.00 0.0 0.00 3.53 F
2393 2669 0.393537 CGCCTTCCTCTTTGCATCCT 60.394 55.0 0.00 0.0 0.00 3.24 F
3536 4248 0.100503 GTTCAAAGCGCAACTGTGGT 59.899 50.0 11.47 0.0 33.97 4.16 F
4060 4779 0.240945 GGCCACAAGACCAATTCACG 59.759 55.0 0.00 0.0 0.00 4.35 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1541 1716 0.245266 TAGTGTCGATTTGCTCCGCA 59.755 50.0 0.00 0.0 36.47 5.69 R
2371 2647 0.251341 ATGCAAAGAGGAAGGCGGTT 60.251 50.0 0.00 0.0 0.00 4.44 R
3505 4217 0.165944 CTTTGAACCGTGCCGATGTC 59.834 55.0 0.00 0.0 0.00 3.06 R
4313 5053 0.541863 ATAGGGCAAAGTGAGGGTCG 59.458 55.0 0.00 0.0 0.00 4.79 R
5073 5829 0.893270 TTGGTCCATGGTCTTTGCCG 60.893 55.0 12.58 0.0 0.00 5.69 R
5994 6780 0.174845 GAGGGTACATAGCGTGTGCA 59.825 55.0 13.37 0.0 44.25 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
115 116 2.200067 CAGAAGATGTAGCTCTTGCCG 58.800 52.381 0.00 0.00 40.80 5.69
119 120 0.108138 GATGTAGCTCTTGCCGGTGT 60.108 55.000 1.90 0.00 40.80 4.16
138 139 1.317431 TAGCTTAGTTGGCGGCTCGA 61.317 55.000 11.43 0.00 36.40 4.04
204 206 1.674764 CCTCTGATGCTGCCTCTCGT 61.675 60.000 6.49 0.00 0.00 4.18
274 276 4.684703 CGACCTTTGTTAAGTGTACCTCTG 59.315 45.833 0.00 0.00 0.00 3.35
368 370 2.720254 TCCGATCTATTGGAGGACCCTA 59.280 50.000 0.00 0.00 35.41 3.53
426 428 4.426416 CATGTCCAGTGGCAAATACATTG 58.574 43.478 3.51 0.97 42.21 2.82
469 471 0.174845 TCAGCTGCATACGGTGTACC 59.825 55.000 9.47 0.00 0.00 3.34
497 499 3.756933 ATGCAAGCAAAATCCAGTTGT 57.243 38.095 0.00 0.00 0.00 3.32
666 669 3.010696 TCAGCTCCCTCTCAGAGTTTCTA 59.989 47.826 0.00 0.00 33.69 2.10
674 677 5.888724 CCCTCTCAGAGTTTCTACTGTATCA 59.111 44.000 0.00 0.00 33.84 2.15
678 681 8.410673 TCTCAGAGTTTCTACTGTATCACTTT 57.589 34.615 0.00 0.00 33.84 2.66
741 755 4.051661 TCCCTTTGAGCTGAATGGAATT 57.948 40.909 17.74 0.00 40.93 2.17
824 838 3.823873 AGAGTAGAGATTGGCATAGGACG 59.176 47.826 0.00 0.00 0.00 4.79
845 859 3.270877 GGTACAAGCCCACACAATCTAG 58.729 50.000 0.00 0.00 0.00 2.43
846 860 3.307480 GGTACAAGCCCACACAATCTAGT 60.307 47.826 0.00 0.00 0.00 2.57
847 861 4.081309 GGTACAAGCCCACACAATCTAGTA 60.081 45.833 0.00 0.00 0.00 1.82
848 862 4.844349 ACAAGCCCACACAATCTAGTAT 57.156 40.909 0.00 0.00 0.00 2.12
849 863 5.950544 ACAAGCCCACACAATCTAGTATA 57.049 39.130 0.00 0.00 0.00 1.47
902 916 1.266786 GACGTCGATGGCGTATTCGG 61.267 60.000 9.90 0.00 43.04 4.30
932 952 1.679680 CTCCACCGATCTAAACGCCTA 59.320 52.381 0.00 0.00 0.00 3.93
943 963 2.457743 AAACGCCTACCCACATCGCA 62.458 55.000 0.00 0.00 0.00 5.10
947 967 1.815421 CCTACCCACATCGCACAGC 60.815 63.158 0.00 0.00 0.00 4.40
948 968 1.815421 CTACCCACATCGCACAGCC 60.815 63.158 0.00 0.00 0.00 4.85
949 969 2.244117 CTACCCACATCGCACAGCCT 62.244 60.000 0.00 0.00 0.00 4.58
950 970 2.238847 TACCCACATCGCACAGCCTC 62.239 60.000 0.00 0.00 0.00 4.70
951 971 2.267006 CCACATCGCACAGCCTCT 59.733 61.111 0.00 0.00 0.00 3.69
1054 1074 2.668212 CCACCGCCACACGTGAAT 60.668 61.111 25.01 0.00 41.42 2.57
1090 1110 1.582968 GGTACCAGCTCACGACGAA 59.417 57.895 7.15 0.00 0.00 3.85
1103 1123 0.680280 CGACGAAGGGGAGGAAGAGA 60.680 60.000 0.00 0.00 0.00 3.10
1122 1143 0.846427 AGGGGTGAGCCATGGAGAAA 60.846 55.000 18.40 0.00 36.17 2.52
1241 1274 4.131088 GTGAGCGACTCCCCGTCC 62.131 72.222 4.73 0.00 39.56 4.79
1308 1341 2.104111 CACATGAGAATACCGCCCCTAA 59.896 50.000 0.00 0.00 0.00 2.69
1318 1351 1.595093 CCGCCCCTAAGTTTTGCCAG 61.595 60.000 0.00 0.00 0.00 4.85
1319 1352 1.591703 GCCCCTAAGTTTTGCCAGC 59.408 57.895 0.00 0.00 0.00 4.85
1323 1356 1.401905 CCCTAAGTTTTGCCAGCGATC 59.598 52.381 0.00 0.00 0.00 3.69
1356 1389 5.652014 TCCCAGTTTTATCATAGGTTGCTTG 59.348 40.000 0.00 0.00 0.00 4.01
1358 1391 6.324819 CCAGTTTTATCATAGGTTGCTTGTG 58.675 40.000 0.00 0.00 0.00 3.33
1359 1392 5.801947 CAGTTTTATCATAGGTTGCTTGTGC 59.198 40.000 0.00 0.00 40.20 4.57
1362 1395 7.393234 AGTTTTATCATAGGTTGCTTGTGCTTA 59.607 33.333 0.00 0.00 40.48 3.09
1363 1396 7.695480 TTTATCATAGGTTGCTTGTGCTTAA 57.305 32.000 0.00 0.00 40.48 1.85
1373 1473 4.927422 TGCTTGTGCTTAACTTGGTTTAC 58.073 39.130 0.00 0.00 40.48 2.01
1375 1475 5.105716 TGCTTGTGCTTAACTTGGTTTACAA 60.106 36.000 0.00 0.00 40.48 2.41
1394 1494 7.534085 TTACAACCATAGCGAAAATCTACTG 57.466 36.000 0.00 0.00 0.00 2.74
1395 1495 5.730550 ACAACCATAGCGAAAATCTACTGA 58.269 37.500 0.00 0.00 0.00 3.41
1396 1496 6.349300 ACAACCATAGCGAAAATCTACTGAT 58.651 36.000 0.00 0.00 33.70 2.90
1397 1497 6.823689 ACAACCATAGCGAAAATCTACTGATT 59.176 34.615 0.00 0.00 44.08 2.57
1398 1498 6.851222 ACCATAGCGAAAATCTACTGATTG 57.149 37.500 0.00 0.00 41.62 2.67
1399 1499 5.237344 ACCATAGCGAAAATCTACTGATTGC 59.763 40.000 0.00 0.00 41.62 3.56
1420 1520 2.639839 CTCCTCCCTTCAAGAGTTTCCA 59.360 50.000 0.00 0.00 0.00 3.53
1424 1524 3.817647 CTCCCTTCAAGAGTTTCCAAGTG 59.182 47.826 0.00 0.00 0.00 3.16
1427 1527 1.593196 TCAAGAGTTTCCAAGTGCGG 58.407 50.000 0.00 0.00 0.00 5.69
1431 1531 3.695830 AGAGTTTCCAAGTGCGGATTA 57.304 42.857 0.00 0.00 34.19 1.75
1443 1543 4.079253 AGTGCGGATTAGGTTGAACAATT 58.921 39.130 0.00 0.00 0.00 2.32
1465 1565 3.871006 TGTAGATGATGTGAATTCGGTGC 59.129 43.478 0.04 0.00 0.00 5.01
1470 1570 2.095692 TGATGTGAATTCGGTGCATTCG 59.904 45.455 0.04 6.14 33.91 3.34
1479 1579 0.376852 CGGTGCATTCGTTGGTATGG 59.623 55.000 0.00 0.00 0.00 2.74
1489 1593 3.670625 TCGTTGGTATGGAAACCTGAAG 58.329 45.455 0.00 0.00 40.44 3.02
1502 1606 1.901591 CCTGAAGGTTGTGTCATGCT 58.098 50.000 0.00 0.00 0.00 3.79
1520 1624 2.555325 TGCTTGACTGCTTGGAGATTTG 59.445 45.455 0.00 0.00 0.00 2.32
1526 1630 3.760684 GACTGCTTGGAGATTTGACCAAT 59.239 43.478 0.00 0.00 43.75 3.16
1528 1632 3.760151 CTGCTTGGAGATTTGACCAATCA 59.240 43.478 0.00 0.00 43.63 2.57
1529 1633 4.151121 TGCTTGGAGATTTGACCAATCAA 58.849 39.130 0.00 0.00 43.63 2.57
1541 1716 8.991783 ATTTGACCAATCAATGATCTAGTGAT 57.008 30.769 0.00 0.00 45.33 3.06
1544 1719 4.753610 ACCAATCAATGATCTAGTGATGCG 59.246 41.667 0.00 5.40 42.82 4.73
1568 1743 4.974591 AGCAAATCGACACTATGCTTTTC 58.025 39.130 6.46 0.00 44.43 2.29
1577 1752 5.120674 CGACACTATGCTTTTCTGTCATCAA 59.879 40.000 0.00 0.00 32.39 2.57
1611 1882 7.097192 TGTTGGCACTAGATCTTACAAGTAAG 58.903 38.462 12.61 12.61 42.86 2.34
1622 1893 6.049955 TCTTACAAGTAAGTGGATCTTGGG 57.950 41.667 16.95 0.60 42.29 4.12
1623 1894 5.783360 TCTTACAAGTAAGTGGATCTTGGGA 59.217 40.000 16.95 2.47 42.29 4.37
1666 1938 2.877097 TGCTGGTAGCCTTCATTTCA 57.123 45.000 0.00 0.00 41.51 2.69
1669 1941 1.667724 CTGGTAGCCTTCATTTCAGCG 59.332 52.381 0.00 0.00 0.00 5.18
1702 1974 1.879927 TAGGGAGACTGGCAGGAGCT 61.880 60.000 20.34 12.73 41.70 4.09
1706 1978 1.407936 GAGACTGGCAGGAGCTATGA 58.592 55.000 20.34 0.00 41.70 2.15
1732 2004 1.009829 CGTGCCCTCTTAAGTGCATC 58.990 55.000 16.12 10.90 35.96 3.91
1751 2023 3.431673 TCCACATGGTGCTGTTAATCA 57.568 42.857 0.00 0.00 36.34 2.57
1759 2031 7.221259 CACATGGTGCTGTTAATCATTACAATG 59.779 37.037 0.00 0.00 37.75 2.82
1800 2072 1.106285 GCATACTTTGGCCCCTCTTG 58.894 55.000 0.00 0.00 0.00 3.02
1837 2109 2.288666 TCTGGCCGCATCAAATTCTAC 58.711 47.619 0.00 0.00 0.00 2.59
1846 2118 4.676546 GCATCAAATTCTACTTCTTGGCC 58.323 43.478 0.00 0.00 0.00 5.36
1884 2159 7.039923 TCCTCCATGTTTATCCGATAGTAAGAC 60.040 40.741 0.00 0.00 0.00 3.01
1910 2185 3.446161 CCATACGACCTCTTACTTGGACA 59.554 47.826 0.00 0.00 0.00 4.02
1918 2193 6.594159 CGACCTCTTACTTGGACAATTGTTAT 59.406 38.462 13.36 0.00 0.00 1.89
1920 2195 6.151144 ACCTCTTACTTGGACAATTGTTATGC 59.849 38.462 13.36 0.00 0.00 3.14
1946 2221 5.188555 TGACTGATGAGTGGAAAGAGCTTAT 59.811 40.000 0.00 0.00 30.16 1.73
1953 2228 4.583871 AGTGGAAAGAGCTTATGGAGTTG 58.416 43.478 0.00 0.00 0.00 3.16
1963 2238 5.994250 AGCTTATGGAGTTGAGCTAATTGA 58.006 37.500 0.00 0.00 43.21 2.57
1966 2241 6.293845 GCTTATGGAGTTGAGCTAATTGATGG 60.294 42.308 0.00 0.00 32.54 3.51
1972 2247 6.037610 GGAGTTGAGCTAATTGATGGTGTTAG 59.962 42.308 0.00 0.00 0.00 2.34
1973 2248 6.476378 AGTTGAGCTAATTGATGGTGTTAGT 58.524 36.000 0.00 0.00 0.00 2.24
1974 2249 7.620880 AGTTGAGCTAATTGATGGTGTTAGTA 58.379 34.615 0.00 0.00 0.00 1.82
1976 2251 6.049149 TGAGCTAATTGATGGTGTTAGTAGC 58.951 40.000 0.00 0.00 34.32 3.58
1977 2252 5.368989 AGCTAATTGATGGTGTTAGTAGCC 58.631 41.667 0.00 0.00 34.58 3.93
1978 2253 5.104527 AGCTAATTGATGGTGTTAGTAGCCA 60.105 40.000 0.00 0.00 34.58 4.75
1979 2254 5.765182 GCTAATTGATGGTGTTAGTAGCCAT 59.235 40.000 0.00 0.00 44.82 4.40
1980 2255 6.293626 GCTAATTGATGGTGTTAGTAGCCATG 60.294 42.308 0.00 0.00 42.48 3.66
1981 2256 3.558931 TGATGGTGTTAGTAGCCATGG 57.441 47.619 7.63 7.63 42.48 3.66
1983 2258 3.265737 TGATGGTGTTAGTAGCCATGGTT 59.734 43.478 14.67 10.52 42.48 3.67
1984 2259 3.343941 TGGTGTTAGTAGCCATGGTTC 57.656 47.619 14.67 4.26 0.00 3.62
1985 2260 2.277084 GGTGTTAGTAGCCATGGTTCG 58.723 52.381 14.67 0.00 0.00 3.95
1986 2261 2.354403 GGTGTTAGTAGCCATGGTTCGT 60.354 50.000 14.67 0.40 0.00 3.85
1993 2268 2.939460 AGCCATGGTTCGTTAAATGC 57.061 45.000 14.67 0.00 0.00 3.56
1999 2274 4.338118 CCATGGTTCGTTAAATGCATAGGT 59.662 41.667 2.57 0.00 0.00 3.08
2001 2276 4.328536 TGGTTCGTTAAATGCATAGGTGT 58.671 39.130 0.00 0.00 0.00 4.16
2028 2303 4.457834 AGTGATGGTTCTGTACTACTGC 57.542 45.455 0.00 0.00 0.00 4.40
2055 2330 0.620030 AGCACACCATATCAGTGGCA 59.380 50.000 13.58 0.00 43.27 4.92
2056 2331 1.213678 AGCACACCATATCAGTGGCAT 59.786 47.619 13.58 0.00 43.27 4.40
2057 2332 1.335810 GCACACCATATCAGTGGCATG 59.664 52.381 7.21 0.00 43.27 4.06
2088 2363 4.203226 TGCACATTTTGAGTGTTCCACTA 58.797 39.130 0.00 0.00 45.44 2.74
2094 2369 9.345517 CACATTTTGAGTGTTCCACTATTTATG 57.654 33.333 0.00 3.09 45.44 1.90
2095 2370 9.295825 ACATTTTGAGTGTTCCACTATTTATGA 57.704 29.630 0.00 0.00 45.44 2.15
2097 2372 7.681939 TTTGAGTGTTCCACTATTTATGACC 57.318 36.000 0.00 0.00 45.44 4.02
2098 2373 6.620877 TGAGTGTTCCACTATTTATGACCT 57.379 37.500 0.00 0.00 45.44 3.85
2099 2374 7.727578 TGAGTGTTCCACTATTTATGACCTA 57.272 36.000 0.00 0.00 45.44 3.08
2100 2375 7.782049 TGAGTGTTCCACTATTTATGACCTAG 58.218 38.462 0.00 0.00 45.44 3.02
2108 2383 7.987458 TCCACTATTTATGACCTAGCTCTTTTG 59.013 37.037 0.00 0.00 0.00 2.44
2122 2397 7.234577 CCTAGCTCTTTTGATCCTATTACCTCT 59.765 40.741 0.00 0.00 0.00 3.69
2156 2431 9.803315 GTATTTGTTAGTGATGACTGATGAGTA 57.197 33.333 0.00 0.00 33.21 2.59
2157 2432 8.939201 ATTTGTTAGTGATGACTGATGAGTAG 57.061 34.615 0.00 0.00 33.21 2.57
2159 2434 7.089770 TGTTAGTGATGACTGATGAGTAGAC 57.910 40.000 0.00 0.00 33.21 2.59
2175 2450 7.997773 TGAGTAGACAACTAGAAAGAGCTTA 57.002 36.000 0.00 0.00 39.07 3.09
2177 2452 8.679100 TGAGTAGACAACTAGAAAGAGCTTATC 58.321 37.037 0.00 0.00 39.07 1.75
2179 2454 5.897050 AGACAACTAGAAAGAGCTTATCGG 58.103 41.667 0.00 0.00 0.00 4.18
2211 2487 1.753073 GCTTGCATTTAGTGATGGGCT 59.247 47.619 0.00 0.00 0.00 5.19
2297 2573 3.310774 GCGCACAACATTATCTCTGTGAT 59.689 43.478 0.30 0.00 41.35 3.06
2301 2577 5.817296 GCACAACATTATCTCTGTGATACCA 59.183 40.000 5.28 0.00 41.35 3.25
2320 2596 9.184523 TGATACCAAGGATAATAAAACTGTTGG 57.815 33.333 0.00 0.00 39.32 3.77
2333 2609 0.754957 CTGTTGGTGTCCCTTTGCCA 60.755 55.000 0.00 0.00 0.00 4.92
2340 2616 0.187117 TGTCCCTTTGCCACATCCAA 59.813 50.000 0.00 0.00 0.00 3.53
2345 2621 3.007831 TCCCTTTGCCACATCCAATTTTC 59.992 43.478 0.00 0.00 0.00 2.29
2357 2633 3.399330 TCCAATTTTCGTCTCCACTGTC 58.601 45.455 0.00 0.00 0.00 3.51
2364 2640 0.453793 CGTCTCCACTGTCTGCCTAG 59.546 60.000 0.00 0.00 0.00 3.02
2370 2646 1.674221 CCACTGTCTGCCTAGCTGTTC 60.674 57.143 0.00 0.00 0.00 3.18
2371 2647 1.001293 CACTGTCTGCCTAGCTGTTCA 59.999 52.381 0.00 0.00 0.00 3.18
2373 2649 2.072298 CTGTCTGCCTAGCTGTTCAAC 58.928 52.381 0.00 0.00 0.00 3.18
2374 2650 1.270839 TGTCTGCCTAGCTGTTCAACC 60.271 52.381 0.00 0.00 0.00 3.77
2376 2652 1.639298 CTGCCTAGCTGTTCAACCGC 61.639 60.000 0.00 0.00 0.00 5.68
2377 2653 2.399356 GCCTAGCTGTTCAACCGCC 61.399 63.158 0.00 0.00 0.00 6.13
2393 2669 0.393537 CGCCTTCCTCTTTGCATCCT 60.394 55.000 0.00 0.00 0.00 3.24
2400 2676 4.640771 TCCTCTTTGCATCCTAAACACT 57.359 40.909 0.00 0.00 0.00 3.55
2405 2681 6.037610 CCTCTTTGCATCCTAAACACTCATAC 59.962 42.308 0.00 0.00 0.00 2.39
2430 2706 2.401766 GCATCCCTGTCCAGTTGCG 61.402 63.158 0.00 0.00 0.00 4.85
2431 2707 1.003355 CATCCCTGTCCAGTTGCGT 60.003 57.895 0.00 0.00 0.00 5.24
2485 2761 7.433537 AACATGTAAATAGGCAGTACTAGGT 57.566 36.000 0.00 0.00 0.00 3.08
2569 2845 5.899547 ACTTTTGTTTCTCATTTTCCTCCCT 59.100 36.000 0.00 0.00 0.00 4.20
2597 2873 1.202746 TGTGGTGCTTGCTGTGATACA 60.203 47.619 0.00 0.00 0.00 2.29
2606 2882 4.445453 CTTGCTGTGATACATCTGCCTTA 58.555 43.478 0.00 0.00 0.00 2.69
2607 2883 4.694760 TGCTGTGATACATCTGCCTTAT 57.305 40.909 0.00 0.00 0.00 1.73
2608 2884 4.383173 TGCTGTGATACATCTGCCTTATG 58.617 43.478 0.00 0.00 0.00 1.90
2609 2885 3.188048 GCTGTGATACATCTGCCTTATGC 59.812 47.826 0.00 0.00 41.77 3.14
2611 2887 3.392285 TGTGATACATCTGCCTTATGCCT 59.608 43.478 0.00 0.00 40.16 4.75
2656 3349 3.245264 CCCACCTACCTGAACCTTGATTT 60.245 47.826 0.00 0.00 0.00 2.17
2657 3350 3.758554 CCACCTACCTGAACCTTGATTTG 59.241 47.826 0.00 0.00 0.00 2.32
2658 3351 4.398319 CACCTACCTGAACCTTGATTTGT 58.602 43.478 0.00 0.00 0.00 2.83
2659 3352 5.514136 CCACCTACCTGAACCTTGATTTGTA 60.514 44.000 0.00 0.00 0.00 2.41
2660 3353 6.180472 CACCTACCTGAACCTTGATTTGTAT 58.820 40.000 0.00 0.00 0.00 2.29
2661 3354 6.659242 CACCTACCTGAACCTTGATTTGTATT 59.341 38.462 0.00 0.00 0.00 1.89
2662 3355 6.884836 ACCTACCTGAACCTTGATTTGTATTC 59.115 38.462 0.00 0.00 0.00 1.75
2663 3356 6.318900 CCTACCTGAACCTTGATTTGTATTCC 59.681 42.308 0.00 0.00 0.00 3.01
2714 3407 5.049167 GGATTGCACTGAGATTCTAGTCAG 58.951 45.833 6.55 6.55 44.92 3.51
2718 3411 3.737663 GCACTGAGATTCTAGTCAGCCTG 60.738 52.174 7.76 2.45 43.48 4.85
2729 3422 0.590195 GTCAGCCTGAAACAGCTGTG 59.410 55.000 22.49 8.58 37.13 3.66
2737 3430 2.620115 CTGAAACAGCTGTGGAATGTGT 59.380 45.455 22.49 0.00 0.00 3.72
2744 3437 2.554032 AGCTGTGGAATGTGTTGTTAGC 59.446 45.455 0.00 0.00 0.00 3.09
2745 3438 2.293122 GCTGTGGAATGTGTTGTTAGCA 59.707 45.455 0.00 0.00 0.00 3.49
2774 3467 5.750352 TTTAAATCAAGTACTCCCTCCGT 57.250 39.130 0.00 0.00 0.00 4.69
2775 3468 5.750352 TTAAATCAAGTACTCCCTCCGTT 57.250 39.130 0.00 0.00 0.00 4.44
2777 3470 1.553706 TCAAGTACTCCCTCCGTTCC 58.446 55.000 0.00 0.00 0.00 3.62
2778 3471 1.076677 TCAAGTACTCCCTCCGTTCCT 59.923 52.381 0.00 0.00 0.00 3.36
2779 3472 2.309755 TCAAGTACTCCCTCCGTTCCTA 59.690 50.000 0.00 0.00 0.00 2.94
2780 3473 3.094572 CAAGTACTCCCTCCGTTCCTAA 58.905 50.000 0.00 0.00 0.00 2.69
2781 3474 3.463048 AGTACTCCCTCCGTTCCTAAA 57.537 47.619 0.00 0.00 0.00 1.85
2782 3475 3.991683 AGTACTCCCTCCGTTCCTAAAT 58.008 45.455 0.00 0.00 0.00 1.40
2783 3476 5.134725 AGTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
2784 3477 5.713807 AGTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
2785 3478 6.856757 AGTACTCCCTCCGTTCCTAAATATA 58.143 40.000 0.00 0.00 0.00 0.86
2786 3479 7.300658 AGTACTCCCTCCGTTCCTAAATATAA 58.699 38.462 0.00 0.00 0.00 0.98
2788 3481 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
2789 3482 6.614496 ACTCCCTCCGTTCCTAAATATAAGTT 59.386 38.462 0.00 0.00 0.00 2.66
2791 3484 7.864770 TCCCTCCGTTCCTAAATATAAGTTTT 58.135 34.615 0.00 0.00 0.00 2.43
2792 3485 7.989170 TCCCTCCGTTCCTAAATATAAGTTTTC 59.011 37.037 0.00 0.00 0.00 2.29
2793 3486 7.991460 CCCTCCGTTCCTAAATATAAGTTTTCT 59.009 37.037 0.00 0.00 0.00 2.52
2794 3487 9.392259 CCTCCGTTCCTAAATATAAGTTTTCTT 57.608 33.333 0.00 0.00 43.24 2.52
2821 3514 9.698309 AGAGATTTCAATATGAACTACATACGG 57.302 33.333 0.00 0.00 43.12 4.02
2822 3515 9.692749 GAGATTTCAATATGAACTACATACGGA 57.307 33.333 0.00 0.00 43.12 4.69
2825 3518 9.778741 ATTTCAATATGAACTACATACGGATGT 57.221 29.630 19.12 19.12 43.12 3.06
2861 3554 5.801350 TTAGATTCACTCATTTTGCTCCG 57.199 39.130 0.00 0.00 0.00 4.63
2863 3556 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
2864 3557 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
2865 3558 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
2867 3560 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
2868 3561 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
2869 3562 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
2870 3563 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
2871 3564 4.439057 TCATTTTGCTCCGTATGTAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
2873 3566 4.481368 TTTTGCTCCGTATGTAGTCCAT 57.519 40.909 0.00 0.00 37.58 3.41
2875 3568 5.801531 TTTGCTCCGTATGTAGTCCATAT 57.198 39.130 0.00 0.00 38.29 1.78
2876 3569 5.801531 TTGCTCCGTATGTAGTCCATATT 57.198 39.130 0.00 0.00 38.29 1.28
2878 3571 4.021456 TGCTCCGTATGTAGTCCATATTGG 60.021 45.833 0.00 0.00 38.29 3.16
2879 3572 4.219944 GCTCCGTATGTAGTCCATATTGGA 59.780 45.833 0.00 0.00 45.98 3.53
2916 3609 9.440761 AGACTTATATTTAGGAATGGTGAGAGT 57.559 33.333 0.00 0.00 0.00 3.24
2959 3652 7.557724 TGGTTATACTTGTCGACAATTCCATA 58.442 34.615 29.79 19.73 35.02 2.74
2963 3656 3.627577 ACTTGTCGACAATTCCATATGGC 59.372 43.478 29.79 0.68 35.02 4.40
3006 3699 4.418013 TGCATGTAATTTGAAGTGGTCG 57.582 40.909 0.00 0.00 0.00 4.79
3057 3757 8.707938 TCATTCTTACATGTGTAATGAGTCAG 57.292 34.615 19.87 3.69 39.49 3.51
3069 3770 8.720562 TGTGTAATGAGTCAGTTATGTTTCATG 58.279 33.333 0.00 0.00 33.75 3.07
3095 3797 7.713942 GGTCGTATATAATTTCTCAAACCCACT 59.286 37.037 0.00 0.00 0.00 4.00
3117 3820 5.958987 ACTAACTCTCTGTACCTATTGGCTT 59.041 40.000 0.00 0.00 36.63 4.35
3128 3831 6.773685 TGTACCTATTGGCTTAACAGTTTTGT 59.226 34.615 0.00 0.00 36.43 2.83
3130 3833 7.448748 ACCTATTGGCTTAACAGTTTTGTAG 57.551 36.000 0.00 0.00 34.62 2.74
3165 3869 4.897051 AGGGTGGTCATAGTTCCTAGATT 58.103 43.478 0.00 0.00 0.00 2.40
3168 3872 6.217693 AGGGTGGTCATAGTTCCTAGATTTTT 59.782 38.462 0.00 0.00 0.00 1.94
3231 3942 4.323104 CCACTTTCCCTCTTGAACTCCTAG 60.323 50.000 0.00 0.00 0.00 3.02
3232 3943 3.262151 ACTTTCCCTCTTGAACTCCTAGC 59.738 47.826 0.00 0.00 0.00 3.42
3233 3944 1.867363 TCCCTCTTGAACTCCTAGCC 58.133 55.000 0.00 0.00 0.00 3.93
3234 3945 0.833949 CCCTCTTGAACTCCTAGCCC 59.166 60.000 0.00 0.00 0.00 5.19
3243 3954 2.480642 ACTCCTAGCCCCCTTTCTAG 57.519 55.000 0.00 0.00 33.76 2.43
3250 3961 5.974370 TCCTAGCCCCCTTTCTAGAAAATAA 59.026 40.000 18.25 0.00 35.48 1.40
3280 3991 6.757897 TCGACTTTCATAAATGGCATCTTT 57.242 33.333 0.00 0.00 0.00 2.52
3281 3992 7.156876 TCGACTTTCATAAATGGCATCTTTT 57.843 32.000 0.00 0.00 0.00 2.27
3327 4038 6.290799 CGCAGATATCGCTAGTGATTTATTCG 60.291 42.308 23.14 14.86 0.00 3.34
3345 4056 9.664332 ATTTATTCGCTGCATATTCTATTCTCT 57.336 29.630 0.00 0.00 0.00 3.10
3394 4105 7.903145 TGATACATTTATCCTTAGTACGCCAT 58.097 34.615 0.00 0.00 34.18 4.40
3407 4118 1.994916 ACGCCATTGCTTGTTATTGC 58.005 45.000 0.00 0.00 34.43 3.56
3417 4128 6.579666 TTGCTTGTTATTGCTCTGATTTCT 57.420 33.333 0.00 0.00 0.00 2.52
3429 4140 8.627208 TTGCTCTGATTTCTTTGATAGAGTTT 57.373 30.769 0.00 0.00 35.34 2.66
3489 4201 3.791320 TGACTACTCCATCCAGTTTCCT 58.209 45.455 0.00 0.00 0.00 3.36
3490 4202 4.168101 TGACTACTCCATCCAGTTTCCTT 58.832 43.478 0.00 0.00 0.00 3.36
3493 4205 4.785376 ACTACTCCATCCAGTTTCCTTCAT 59.215 41.667 0.00 0.00 0.00 2.57
3494 4206 3.960571 ACTCCATCCAGTTTCCTTCATG 58.039 45.455 0.00 0.00 0.00 3.07
3505 4217 1.522668 TCCTTCATGCTGTCGTTTGG 58.477 50.000 0.00 0.00 0.00 3.28
3515 4227 1.495951 GTCGTTTGGACATCGGCAC 59.504 57.895 0.00 0.00 45.36 5.01
3536 4248 0.100503 GTTCAAAGCGCAACTGTGGT 59.899 50.000 11.47 0.00 33.97 4.16
3548 4260 3.304257 GCAACTGTGGTGACTGATTTCTG 60.304 47.826 0.00 0.00 0.00 3.02
3551 4263 3.879295 ACTGTGGTGACTGATTTCTGTTG 59.121 43.478 0.00 0.00 0.00 3.33
3593 4305 7.773224 CCCACACCATTATGTCTTTTCATAGTA 59.227 37.037 0.00 0.00 32.85 1.82
3615 4327 3.673746 TTCTTGAGACAAAGTTGCACG 57.326 42.857 0.00 0.00 0.00 5.34
3631 4343 9.469807 AAAGTTGCACGTATGATTTTTCATTTA 57.530 25.926 0.00 0.00 0.00 1.40
3681 4395 8.980481 ATTGATATAAGTTCCAAAAGTCGGAT 57.020 30.769 0.00 0.00 30.99 4.18
3684 4398 9.238368 TGATATAAGTTCCAAAAGTCGGATTTT 57.762 29.630 0.00 0.00 32.65 1.82
3688 4402 5.382616 AGTTCCAAAAGTCGGATTTTACCT 58.617 37.500 0.00 0.00 31.29 3.08
3707 4421 2.493278 CCTATGCCTCCAAAACAACAGG 59.507 50.000 0.00 0.00 0.00 4.00
3711 4425 1.068588 GCCTCCAAAACAACAGGTTCC 59.931 52.381 0.00 0.00 39.29 3.62
3718 4432 2.838637 AACAACAGGTTCCAGGGAAA 57.161 45.000 1.58 0.00 33.35 3.13
3771 4485 8.226112 TCTAAATTACTTGGGGTTTAAGTTCCA 58.774 33.333 0.00 0.00 39.06 3.53
3777 4491 5.538813 ACTTGGGGTTTAAGTTCCAGATTTC 59.461 40.000 0.00 0.00 34.91 2.17
3778 4492 5.333566 TGGGGTTTAAGTTCCAGATTTCT 57.666 39.130 0.00 0.00 0.00 2.52
3780 4494 4.705507 GGGGTTTAAGTTCCAGATTTCTCC 59.294 45.833 0.00 0.00 0.00 3.71
3781 4495 5.321927 GGGTTTAAGTTCCAGATTTCTCCA 58.678 41.667 0.00 0.00 0.00 3.86
3816 4532 4.272489 CAATACAACATGGTCTGGGTCAT 58.728 43.478 0.00 0.00 0.00 3.06
3817 4533 2.978156 ACAACATGGTCTGGGTCATT 57.022 45.000 0.00 0.00 0.00 2.57
3834 4550 5.163519 GGGTCATTGGTCATCCACTAAATTG 60.164 44.000 0.00 0.00 44.22 2.32
3848 4564 9.860650 ATCCACTAAATTGGTAATGTGCTAATA 57.139 29.630 0.00 0.00 37.93 0.98
3866 4582 7.913674 GCTAATAGCAAAGCATAAGACCTAT 57.086 36.000 7.49 0.00 41.89 2.57
3868 4584 8.787852 GCTAATAGCAAAGCATAAGACCTATTT 58.212 33.333 7.49 0.00 41.89 1.40
3871 4587 6.124088 AGCAAAGCATAAGACCTATTTTCG 57.876 37.500 0.00 0.00 0.00 3.46
3873 4589 6.037610 AGCAAAGCATAAGACCTATTTTCGAG 59.962 38.462 0.00 0.00 0.00 4.04
3874 4590 6.183360 GCAAAGCATAAGACCTATTTTCGAGT 60.183 38.462 0.00 0.00 0.00 4.18
3875 4591 7.402640 CAAAGCATAAGACCTATTTTCGAGTC 58.597 38.462 0.00 0.00 0.00 3.36
3876 4592 6.472686 AGCATAAGACCTATTTTCGAGTCT 57.527 37.500 0.00 0.00 41.25 3.24
3880 4599 3.100671 AGACCTATTTTCGAGTCTGGCT 58.899 45.455 2.28 0.00 38.15 4.75
3917 4636 9.249053 TGGATATTGCTGGTATTACAAAAAGAA 57.751 29.630 0.00 0.00 0.00 2.52
3920 4639 7.889589 ATTGCTGGTATTACAAAAAGAAAGC 57.110 32.000 0.00 0.00 0.00 3.51
3953 4672 4.709397 TCCGTTTCATTTTTGGCCATAGAT 59.291 37.500 6.09 0.00 0.00 1.98
4045 4764 1.422024 TGCTAAACTTGGTACTGGCCA 59.578 47.619 4.71 4.71 36.62 5.36
4057 4776 1.620822 ACTGGCCACAAGACCAATTC 58.379 50.000 0.00 0.00 34.96 2.17
4060 4779 0.240945 GGCCACAAGACCAATTCACG 59.759 55.000 0.00 0.00 0.00 4.35
4203 4942 2.039084 CTCAGGTACAAGCTGTCCCTTT 59.961 50.000 6.06 0.00 43.70 3.11
4228 4967 2.307098 AGGGAAGATTGACTTGGACCAG 59.693 50.000 0.00 0.00 39.13 4.00
4274 5013 3.464833 ACAAGCCATATCCTCATTTCCCT 59.535 43.478 0.00 0.00 0.00 4.20
4346 5086 4.314522 TGCCCTATGGAAAAATGTGAGA 57.685 40.909 0.00 0.00 0.00 3.27
4366 5106 7.152645 GTGAGATTCCAAGTTTAGTCAGTACA 58.847 38.462 0.00 0.00 0.00 2.90
4457 5197 2.037121 CCCCCTTTCTGCAAAAATCGTT 59.963 45.455 0.00 0.00 0.00 3.85
4496 5236 9.477484 AATTAATAACATCTCTTAGTAGTGGCG 57.523 33.333 0.00 0.00 0.00 5.69
4499 5239 3.552875 ACATCTCTTAGTAGTGGCGCTA 58.447 45.455 7.64 3.10 0.00 4.26
4508 5249 1.669265 GTAGTGGCGCTATGTTTTCCC 59.331 52.381 11.48 0.00 31.50 3.97
4515 5256 2.411748 GCGCTATGTTTTCCCTTTTTGC 59.588 45.455 0.00 0.00 0.00 3.68
4557 5298 6.381420 TCTCCACTTAGAGCATTTTAGCTACT 59.619 38.462 0.00 0.00 46.75 2.57
4792 5548 0.681733 AAGCTCGCCTTCTCAAGTCA 59.318 50.000 0.00 0.00 0.00 3.41
4840 5596 3.196469 TCATGAAGCTGAGGTACCTTCTG 59.804 47.826 17.53 13.59 36.73 3.02
4846 5602 1.833630 CTGAGGTACCTTCTGGCATGA 59.166 52.381 17.53 0.00 36.63 3.07
4849 5605 3.118261 TGAGGTACCTTCTGGCATGATTC 60.118 47.826 17.53 0.00 36.63 2.52
4878 5634 5.237344 TCTTCTAAAGTGTCAGCTGCTTTTC 59.763 40.000 18.85 5.04 34.69 2.29
4895 5651 7.136822 TGCTTTTCAGCCTCTATCCTATTAA 57.863 36.000 0.00 0.00 46.74 1.40
4923 5679 7.418337 TCTAGTGCCATTTTGTCTATCTACA 57.582 36.000 0.00 0.00 0.00 2.74
4924 5680 7.847096 TCTAGTGCCATTTTGTCTATCTACAA 58.153 34.615 0.00 0.00 37.58 2.41
4945 5701 5.104982 ACAAGATGATTCTCTTCTCCAGGAC 60.105 44.000 0.00 0.00 33.18 3.85
4951 5707 5.960811 TGATTCTCTTCTCCAGGACTGTTAT 59.039 40.000 0.00 0.00 0.00 1.89
4985 5741 3.401182 CTCTATAGTAGTTCTCCGGCGT 58.599 50.000 6.01 0.00 0.00 5.68
5073 5829 2.435938 TTTCCCTGATGGCGCGAC 60.436 61.111 12.10 8.22 0.00 5.19
5153 5909 6.927294 ATCACCTAAACTTAGCATGTTAGC 57.073 37.500 0.00 0.00 0.00 3.09
5158 5914 1.922570 ACTTAGCATGTTAGCGACGG 58.077 50.000 0.00 0.00 40.15 4.79
5224 5980 7.899973 ACAAGCTATCTTCATCCATTGTTTTT 58.100 30.769 0.00 0.00 0.00 1.94
5225 5981 7.816031 ACAAGCTATCTTCATCCATTGTTTTTG 59.184 33.333 0.00 0.00 0.00 2.44
5226 5982 6.335777 AGCTATCTTCATCCATTGTTTTTGC 58.664 36.000 0.00 0.00 0.00 3.68
5227 5983 6.071221 AGCTATCTTCATCCATTGTTTTTGCA 60.071 34.615 0.00 0.00 0.00 4.08
5233 5989 6.601741 TCATCCATTGTTTTTGCAGAAAAC 57.398 33.333 20.72 20.72 39.78 2.43
5235 5991 7.495901 TCATCCATTGTTTTTGCAGAAAACTA 58.504 30.769 24.44 20.63 39.97 2.24
5244 6000 6.586868 TTTTGCAGAAAACTACAGCATTTG 57.413 33.333 0.00 0.00 34.87 2.32
5468 6224 5.568620 AATGGTAATCTGGGTGTAGGATC 57.431 43.478 0.00 0.00 0.00 3.36
5483 6239 3.527507 AGGATCATAAGGCTACCTCGA 57.472 47.619 0.00 0.00 30.89 4.04
5583 6339 1.747924 CTCTGAGCAATCTGACCTCGA 59.252 52.381 0.00 0.00 0.00 4.04
5586 6342 3.196469 TCTGAGCAATCTGACCTCGATTT 59.804 43.478 0.00 0.00 0.00 2.17
5598 6354 2.872245 ACCTCGATTTGATATGGTTGCG 59.128 45.455 0.00 0.00 0.00 4.85
5602 6358 2.611751 CGATTTGATATGGTTGCGTCCA 59.388 45.455 2.23 2.23 42.01 4.02
5657 6413 4.354893 TTCCTTTTCGTTAGGGCAGTTA 57.645 40.909 0.00 0.00 33.41 2.24
5658 6414 4.354893 TCCTTTTCGTTAGGGCAGTTAA 57.645 40.909 0.00 0.00 33.41 2.01
5659 6415 4.320870 TCCTTTTCGTTAGGGCAGTTAAG 58.679 43.478 0.00 0.00 33.41 1.85
5660 6416 3.119955 CCTTTTCGTTAGGGCAGTTAAGC 60.120 47.826 0.00 0.00 0.00 3.09
5661 6417 2.843401 TTCGTTAGGGCAGTTAAGCA 57.157 45.000 0.00 0.00 35.83 3.91
5662 6418 2.843401 TCGTTAGGGCAGTTAAGCAA 57.157 45.000 0.00 0.00 35.83 3.91
5663 6419 2.695359 TCGTTAGGGCAGTTAAGCAAG 58.305 47.619 0.00 0.00 35.83 4.01
5664 6420 2.038033 TCGTTAGGGCAGTTAAGCAAGT 59.962 45.455 0.00 0.00 35.83 3.16
5665 6421 3.258872 TCGTTAGGGCAGTTAAGCAAGTA 59.741 43.478 0.00 0.00 35.83 2.24
5666 6422 4.081309 TCGTTAGGGCAGTTAAGCAAGTAT 60.081 41.667 0.00 0.00 35.83 2.12
5667 6423 5.127519 TCGTTAGGGCAGTTAAGCAAGTATA 59.872 40.000 0.00 0.00 35.83 1.47
5668 6424 5.989777 CGTTAGGGCAGTTAAGCAAGTATAT 59.010 40.000 0.00 0.00 35.83 0.86
5669 6425 6.073765 CGTTAGGGCAGTTAAGCAAGTATATG 60.074 42.308 0.00 0.00 35.83 1.78
5670 6426 5.630415 AGGGCAGTTAAGCAAGTATATGA 57.370 39.130 0.00 0.00 35.83 2.15
5671 6427 6.192970 AGGGCAGTTAAGCAAGTATATGAT 57.807 37.500 0.00 0.00 35.83 2.45
5672 6428 7.316393 AGGGCAGTTAAGCAAGTATATGATA 57.684 36.000 0.00 0.00 35.83 2.15
5673 6429 7.745717 AGGGCAGTTAAGCAAGTATATGATAA 58.254 34.615 0.00 0.00 35.83 1.75
5674 6430 8.386264 AGGGCAGTTAAGCAAGTATATGATAAT 58.614 33.333 0.00 0.00 35.83 1.28
5675 6431 8.454106 GGGCAGTTAAGCAAGTATATGATAATG 58.546 37.037 0.00 0.00 35.83 1.90
5676 6432 9.219603 GGCAGTTAAGCAAGTATATGATAATGA 57.780 33.333 0.00 0.00 35.83 2.57
5769 6552 6.424812 AGCACATTAAATCTTTCCTTGCAAAC 59.575 34.615 0.00 0.00 0.00 2.93
5892 6677 0.677731 CATTGCAAGGCGGGAGAAGA 60.678 55.000 4.94 0.00 0.00 2.87
5938 6723 1.108776 TCTTCGAATAGGGTGGACGG 58.891 55.000 0.00 0.00 0.00 4.79
5945 6730 3.508793 CGAATAGGGTGGACGGTATGTAT 59.491 47.826 0.00 0.00 0.00 2.29
5994 6780 2.285977 GAGGGATTTTTATCGTGGCGT 58.714 47.619 0.00 0.00 0.00 5.68
5996 6782 1.533129 GGGATTTTTATCGTGGCGTGC 60.533 52.381 0.00 0.00 0.00 5.34
6000 6786 0.236187 TTTTATCGTGGCGTGCACAC 59.764 50.000 18.64 7.05 35.55 3.82
6044 6830 1.730547 GCACATTGCTCACGCCAAC 60.731 57.895 0.00 0.00 40.96 3.77
6050 6836 1.159713 TTGCTCACGCCAACTCACAG 61.160 55.000 0.00 0.00 34.43 3.66
6051 6837 1.595382 GCTCACGCCAACTCACAGT 60.595 57.895 0.00 0.00 0.00 3.55
6066 6852 6.639632 ACTCACAGTGTTTTCAATTGCTAT 57.360 33.333 0.00 0.00 0.00 2.97
6076 6862 9.860898 GTGTTTTCAATTGCTATCCTATTCTTT 57.139 29.630 0.00 0.00 0.00 2.52
6112 6903 5.505173 TGGTTCTCTTTTCTGCTTTTCTG 57.495 39.130 0.00 0.00 0.00 3.02
6117 6908 6.966534 TCTCTTTTCTGCTTTTCTGGAAAT 57.033 33.333 0.00 0.00 0.00 2.17
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 6.553100 TCACCTTGGTTTGAAGGAATACAAAT 59.447 34.615 6.31 0.00 44.87 2.32
101 102 1.137086 CTACACCGGCAAGAGCTACAT 59.863 52.381 0.00 0.00 41.70 2.29
115 116 1.366854 GCCGCCAACTAAGCTACACC 61.367 60.000 0.00 0.00 0.00 4.16
119 120 1.141019 CGAGCCGCCAACTAAGCTA 59.859 57.895 0.00 0.00 35.23 3.32
204 206 8.390354 CAATGCGAAGTAGAATGAGAAATGTTA 58.610 33.333 0.00 0.00 0.00 2.41
274 276 4.093556 GTGAAACACCTGAGGATTTCGATC 59.906 45.833 20.14 13.12 35.61 3.69
368 370 5.708697 TGAGAATGAGCAGAACATGTCAAAT 59.291 36.000 0.00 0.00 0.00 2.32
426 428 7.201785 TGAATACCTTCAAGTTGAAAACCTGAC 60.202 37.037 18.55 8.82 46.14 3.51
469 471 4.922692 TGGATTTTGCTTGCATTAGAAACG 59.077 37.500 0.00 0.00 0.00 3.60
666 669 9.620259 AAAGAAGAGAAGAAAAAGTGATACAGT 57.380 29.630 0.00 0.00 0.00 3.55
674 677 7.396540 TCTGCAAAAGAAGAGAAGAAAAAGT 57.603 32.000 0.00 0.00 29.54 2.66
678 681 6.825721 AGAGTTCTGCAAAAGAAGAGAAGAAA 59.174 34.615 0.00 0.00 45.69 2.52
798 812 7.051000 GTCCTATGCCAATCTCTACTCTTTTT 58.949 38.462 0.00 0.00 0.00 1.94
799 813 6.587273 GTCCTATGCCAATCTCTACTCTTTT 58.413 40.000 0.00 0.00 0.00 2.27
800 814 5.221342 CGTCCTATGCCAATCTCTACTCTTT 60.221 44.000 0.00 0.00 0.00 2.52
801 815 4.279671 CGTCCTATGCCAATCTCTACTCTT 59.720 45.833 0.00 0.00 0.00 2.85
802 816 3.823873 CGTCCTATGCCAATCTCTACTCT 59.176 47.826 0.00 0.00 0.00 3.24
803 817 3.057174 CCGTCCTATGCCAATCTCTACTC 60.057 52.174 0.00 0.00 0.00 2.59
804 818 2.894126 CCGTCCTATGCCAATCTCTACT 59.106 50.000 0.00 0.00 0.00 2.57
805 819 2.628657 ACCGTCCTATGCCAATCTCTAC 59.371 50.000 0.00 0.00 0.00 2.59
806 820 2.958818 ACCGTCCTATGCCAATCTCTA 58.041 47.619 0.00 0.00 0.00 2.43
807 821 1.794714 ACCGTCCTATGCCAATCTCT 58.205 50.000 0.00 0.00 0.00 3.10
808 822 2.364324 TGTACCGTCCTATGCCAATCTC 59.636 50.000 0.00 0.00 0.00 2.75
809 823 2.394632 TGTACCGTCCTATGCCAATCT 58.605 47.619 0.00 0.00 0.00 2.40
810 824 2.902705 TGTACCGTCCTATGCCAATC 57.097 50.000 0.00 0.00 0.00 2.67
811 825 2.745152 GCTTGTACCGTCCTATGCCAAT 60.745 50.000 0.00 0.00 0.00 3.16
812 826 1.406341 GCTTGTACCGTCCTATGCCAA 60.406 52.381 0.00 0.00 0.00 4.52
813 827 0.177141 GCTTGTACCGTCCTATGCCA 59.823 55.000 0.00 0.00 0.00 4.92
824 838 2.200373 AGATTGTGTGGGCTTGTACC 57.800 50.000 0.00 0.00 0.00 3.34
845 859 6.673154 AAACAGGCCGTTAAGTTGATATAC 57.327 37.500 12.33 0.00 36.59 1.47
846 860 6.762661 GGTAAACAGGCCGTTAAGTTGATATA 59.237 38.462 12.33 0.00 36.59 0.86
847 861 5.587443 GGTAAACAGGCCGTTAAGTTGATAT 59.413 40.000 12.33 0.00 36.59 1.63
848 862 4.937015 GGTAAACAGGCCGTTAAGTTGATA 59.063 41.667 12.33 0.00 36.59 2.15
849 863 3.754850 GGTAAACAGGCCGTTAAGTTGAT 59.245 43.478 12.33 0.15 36.59 2.57
911 925 0.529992 GGCGTTTAGATCGGTGGAGG 60.530 60.000 0.00 0.00 0.00 4.30
932 952 3.612247 GAGGCTGTGCGATGTGGGT 62.612 63.158 0.00 0.00 0.00 4.51
943 963 1.379309 GACGGAGAGGAGAGGCTGT 60.379 63.158 0.00 0.00 0.00 4.40
947 967 1.755008 GGTGGACGGAGAGGAGAGG 60.755 68.421 0.00 0.00 0.00 3.69
948 968 2.115911 CGGTGGACGGAGAGGAGAG 61.116 68.421 0.00 0.00 39.42 3.20
949 969 2.045242 CGGTGGACGGAGAGGAGA 60.045 66.667 0.00 0.00 39.42 3.71
950 970 3.827898 GCGGTGGACGGAGAGGAG 61.828 72.222 0.00 0.00 44.51 3.69
1053 1073 4.552365 CGGATGTGCGCAGGGGAT 62.552 66.667 12.22 0.00 0.00 3.85
1090 1110 1.869452 ACCCCTCTCTTCCTCCCCT 60.869 63.158 0.00 0.00 0.00 4.79
1103 1123 0.846427 TTTCTCCATGGCTCACCCCT 60.846 55.000 6.96 0.00 33.59 4.79
1197 1230 2.747460 TGCGCCTGCTTGATGGAC 60.747 61.111 4.18 0.00 43.34 4.02
1259 1292 7.409661 CGGAACAAATCGAACTGAAATCAAATG 60.410 37.037 4.27 0.00 0.00 2.32
1308 1341 0.320771 ACGAGATCGCTGGCAAAACT 60.321 50.000 1.39 0.00 44.43 2.66
1318 1351 2.822764 ACTGGGATTTTACGAGATCGC 58.177 47.619 1.39 0.00 44.43 4.58
1319 1352 5.796350 AAAACTGGGATTTTACGAGATCG 57.204 39.130 0.00 0.00 46.33 3.69
1323 1356 8.774586 CCTATGATAAAACTGGGATTTTACGAG 58.225 37.037 0.00 0.00 36.97 4.18
1373 1473 6.851222 ATCAGTAGATTTTCGCTATGGTTG 57.149 37.500 0.00 0.00 0.00 3.77
1375 1475 5.237344 GCAATCAGTAGATTTTCGCTATGGT 59.763 40.000 0.00 0.00 42.46 3.55
1378 1478 5.698545 GGAGCAATCAGTAGATTTTCGCTAT 59.301 40.000 0.00 0.00 42.46 2.97
1382 1482 4.509600 GGAGGAGCAATCAGTAGATTTTCG 59.490 45.833 0.00 0.00 42.46 3.46
1385 1485 4.043596 AGGGAGGAGCAATCAGTAGATTT 58.956 43.478 0.00 0.00 42.46 2.17
1387 1487 3.342926 AGGGAGGAGCAATCAGTAGAT 57.657 47.619 0.00 0.00 35.53 1.98
1388 1488 2.856760 AGGGAGGAGCAATCAGTAGA 57.143 50.000 0.00 0.00 0.00 2.59
1389 1489 2.768527 TGAAGGGAGGAGCAATCAGTAG 59.231 50.000 0.00 0.00 0.00 2.57
1390 1490 2.832838 TGAAGGGAGGAGCAATCAGTA 58.167 47.619 0.00 0.00 0.00 2.74
1391 1491 1.661463 TGAAGGGAGGAGCAATCAGT 58.339 50.000 0.00 0.00 0.00 3.41
1392 1492 2.238144 TCTTGAAGGGAGGAGCAATCAG 59.762 50.000 0.00 0.00 0.00 2.90
1394 1494 2.238395 ACTCTTGAAGGGAGGAGCAATC 59.762 50.000 0.00 0.00 35.34 2.67
1395 1495 2.273619 ACTCTTGAAGGGAGGAGCAAT 58.726 47.619 0.00 0.00 35.34 3.56
1396 1496 1.734655 ACTCTTGAAGGGAGGAGCAA 58.265 50.000 0.00 0.00 35.34 3.91
1397 1497 1.734655 AACTCTTGAAGGGAGGAGCA 58.265 50.000 0.00 0.00 35.34 4.26
1398 1498 2.616765 GGAAACTCTTGAAGGGAGGAGC 60.617 54.545 0.00 0.00 35.34 4.70
1399 1499 2.639839 TGGAAACTCTTGAAGGGAGGAG 59.360 50.000 0.00 0.00 35.34 3.69
1420 1520 3.134574 TGTTCAACCTAATCCGCACTT 57.865 42.857 0.00 0.00 0.00 3.16
1424 1524 4.434713 ACAATTGTTCAACCTAATCCGC 57.565 40.909 4.92 0.00 0.00 5.54
1427 1527 9.941664 CATCATCTACAATTGTTCAACCTAATC 57.058 33.333 17.78 0.00 0.00 1.75
1431 1531 6.942005 TCACATCATCTACAATTGTTCAACCT 59.058 34.615 17.78 0.00 0.00 3.50
1443 1543 3.871006 GCACCGAATTCACATCATCTACA 59.129 43.478 6.22 0.00 0.00 2.74
1465 1565 4.006989 TCAGGTTTCCATACCAACGAATG 58.993 43.478 0.00 0.00 40.82 2.67
1498 1602 2.803030 ATCTCCAAGCAGTCAAGCAT 57.197 45.000 0.00 0.00 36.85 3.79
1502 1606 3.149196 GGTCAAATCTCCAAGCAGTCAA 58.851 45.455 0.00 0.00 0.00 3.18
1510 1614 6.893554 AGATCATTGATTGGTCAAATCTCCAA 59.106 34.615 0.00 0.00 46.67 3.53
1511 1615 6.429151 AGATCATTGATTGGTCAAATCTCCA 58.571 36.000 0.00 0.00 46.67 3.86
1520 1624 5.107182 CGCATCACTAGATCATTGATTGGTC 60.107 44.000 0.00 0.00 35.53 4.02
1526 1630 3.553715 GCTCCGCATCACTAGATCATTGA 60.554 47.826 0.00 0.00 30.20 2.57
1528 1632 2.366590 TGCTCCGCATCACTAGATCATT 59.633 45.455 0.00 0.00 31.71 2.57
1529 1633 1.966354 TGCTCCGCATCACTAGATCAT 59.034 47.619 0.00 0.00 31.71 2.45
1541 1716 0.245266 TAGTGTCGATTTGCTCCGCA 59.755 50.000 0.00 0.00 36.47 5.69
1544 1719 2.555199 AGCATAGTGTCGATTTGCTCC 58.445 47.619 0.00 0.00 39.32 4.70
1554 1729 6.402983 CCTTGATGACAGAAAAGCATAGTGTC 60.403 42.308 0.00 0.00 38.41 3.67
1560 1735 2.494870 GCCCTTGATGACAGAAAAGCAT 59.505 45.455 0.00 0.00 0.00 3.79
1561 1736 1.888512 GCCCTTGATGACAGAAAAGCA 59.111 47.619 0.00 0.00 0.00 3.91
1568 1743 0.679002 CAGGTGGCCCTTGATGACAG 60.679 60.000 0.00 0.00 39.89 3.51
1594 1769 9.743057 CAAGATCCACTTACTTGTAAGATCTAG 57.257 37.037 22.59 9.34 37.82 2.43
1596 1771 7.365117 CCCAAGATCCACTTACTTGTAAGATCT 60.365 40.741 22.59 17.43 39.16 2.75
1611 1882 3.950395 CCAGATTTCTTCCCAAGATCCAC 59.050 47.826 0.00 0.00 37.38 4.02
1622 1893 5.420409 ACTCGTAACATCCCAGATTTCTTC 58.580 41.667 0.00 0.00 0.00 2.87
1623 1894 5.422214 ACTCGTAACATCCCAGATTTCTT 57.578 39.130 0.00 0.00 0.00 2.52
1669 1941 2.496817 CCTAGTCTCCCACGCTGC 59.503 66.667 0.00 0.00 0.00 5.25
1673 1945 0.256464 AGTCTCCCTAGTCTCCCACG 59.744 60.000 0.00 0.00 0.00 4.94
1676 1948 0.757561 GCCAGTCTCCCTAGTCTCCC 60.758 65.000 0.00 0.00 0.00 4.30
1683 1955 1.381872 GCTCCTGCCAGTCTCCCTA 60.382 63.158 0.00 0.00 0.00 3.53
1684 1956 1.879927 TAGCTCCTGCCAGTCTCCCT 61.880 60.000 0.00 0.00 40.80 4.20
1702 1974 1.214673 AGAGGGCACGGAGTAGTCATA 59.785 52.381 0.00 0.00 41.61 2.15
1706 1978 2.100989 CTTAAGAGGGCACGGAGTAGT 58.899 52.381 0.00 0.00 41.61 2.73
1732 2004 4.724074 AATGATTAACAGCACCATGTGG 57.276 40.909 0.00 0.00 42.17 4.17
1774 2046 1.476488 GGGCCAAAGTATGCGACAATT 59.524 47.619 4.39 0.00 0.00 2.32
1779 2051 1.223487 GAGGGGCCAAAGTATGCGA 59.777 57.895 4.39 0.00 0.00 5.10
1800 2072 6.430451 CGGCCAGATGAATCAAACTATTAAC 58.570 40.000 2.24 0.00 0.00 2.01
1846 2118 3.368248 ACATGGAGGAAACATTGGATGG 58.632 45.455 0.00 0.00 33.60 3.51
1853 2125 5.110814 TCGGATAAACATGGAGGAAACAT 57.889 39.130 0.00 0.00 0.00 2.71
1890 2165 5.934402 ATTGTCCAAGTAAGAGGTCGTAT 57.066 39.130 0.00 0.00 0.00 3.06
1891 2166 5.011329 ACAATTGTCCAAGTAAGAGGTCGTA 59.989 40.000 4.92 0.00 0.00 3.43
1892 2167 4.202326 ACAATTGTCCAAGTAAGAGGTCGT 60.202 41.667 4.92 0.00 0.00 4.34
1894 2169 7.626452 GCATAACAATTGTCCAAGTAAGAGGTC 60.626 40.741 12.39 0.00 0.00 3.85
1903 2178 4.083324 AGTCACGCATAACAATTGTCCAAG 60.083 41.667 12.39 5.61 0.00 3.61
1910 2185 4.937620 ACTCATCAGTCACGCATAACAATT 59.062 37.500 0.00 0.00 0.00 2.32
1918 2193 0.678950 TTCCACTCATCAGTCACGCA 59.321 50.000 0.00 0.00 0.00 5.24
1920 2195 3.249091 CTCTTTCCACTCATCAGTCACG 58.751 50.000 0.00 0.00 0.00 4.35
1946 2221 4.263462 ACACCATCAATTAGCTCAACTCCA 60.263 41.667 0.00 0.00 0.00 3.86
1953 2228 5.467063 GGCTACTAACACCATCAATTAGCTC 59.533 44.000 0.00 0.00 32.90 4.09
1963 2238 3.681594 CGAACCATGGCTACTAACACCAT 60.682 47.826 13.04 0.00 45.08 3.55
1966 2241 2.968675 ACGAACCATGGCTACTAACAC 58.031 47.619 13.04 0.00 0.00 3.32
1972 2247 3.127895 TGCATTTAACGAACCATGGCTAC 59.872 43.478 13.04 2.28 0.00 3.58
1973 2248 3.348119 TGCATTTAACGAACCATGGCTA 58.652 40.909 13.04 0.00 0.00 3.93
1974 2249 2.166829 TGCATTTAACGAACCATGGCT 58.833 42.857 13.04 0.00 0.00 4.75
1976 2251 4.338118 ACCTATGCATTTAACGAACCATGG 59.662 41.667 11.19 11.19 0.00 3.66
1977 2252 5.163663 ACACCTATGCATTTAACGAACCATG 60.164 40.000 3.54 0.00 0.00 3.66
1978 2253 4.947388 ACACCTATGCATTTAACGAACCAT 59.053 37.500 3.54 0.00 0.00 3.55
1979 2254 4.328536 ACACCTATGCATTTAACGAACCA 58.671 39.130 3.54 0.00 0.00 3.67
1980 2255 4.957759 ACACCTATGCATTTAACGAACC 57.042 40.909 3.54 0.00 0.00 3.62
1981 2256 6.146898 ACAAACACCTATGCATTTAACGAAC 58.853 36.000 3.54 0.00 0.00 3.95
1983 2258 5.950758 ACAAACACCTATGCATTTAACGA 57.049 34.783 3.54 0.00 0.00 3.85
1984 2259 7.270365 CACTAACAAACACCTATGCATTTAACG 59.730 37.037 3.54 0.00 0.00 3.18
1985 2260 8.293867 TCACTAACAAACACCTATGCATTTAAC 58.706 33.333 3.54 0.00 0.00 2.01
1986 2261 8.397575 TCACTAACAAACACCTATGCATTTAA 57.602 30.769 3.54 0.00 0.00 1.52
1993 2268 6.655003 AGAACCATCACTAACAAACACCTATG 59.345 38.462 0.00 0.00 0.00 2.23
1999 2274 6.588204 AGTACAGAACCATCACTAACAAACA 58.412 36.000 0.00 0.00 0.00 2.83
2001 2276 7.870954 CAGTAGTACAGAACCATCACTAACAAA 59.129 37.037 2.52 0.00 0.00 2.83
2028 2303 6.592994 CCACTGATATGGTGTGCTCATATAAG 59.407 42.308 0.00 0.00 39.93 1.73
2040 2315 2.223641 GCAACATGCCACTGATATGGTG 60.224 50.000 0.00 0.00 42.28 4.17
2064 2339 3.979948 TGGAACACTCAAAATGTGCATG 58.020 40.909 0.00 0.00 38.86 4.06
2088 2363 7.810260 AGGATCAAAAGAGCTAGGTCATAAAT 58.190 34.615 23.18 9.97 0.00 1.40
2094 2369 7.015779 AGGTAATAGGATCAAAAGAGCTAGGTC 59.984 40.741 14.19 14.19 0.00 3.85
2095 2370 6.847036 AGGTAATAGGATCAAAAGAGCTAGGT 59.153 38.462 0.00 0.00 0.00 3.08
2097 2372 8.189119 AGAGGTAATAGGATCAAAAGAGCTAG 57.811 38.462 0.00 0.00 0.00 3.42
2098 2373 8.554490 AAGAGGTAATAGGATCAAAAGAGCTA 57.446 34.615 0.00 0.00 0.00 3.32
2099 2374 7.444703 AAGAGGTAATAGGATCAAAAGAGCT 57.555 36.000 0.00 0.00 0.00 4.09
2100 2375 9.785982 ATTAAGAGGTAATAGGATCAAAAGAGC 57.214 33.333 0.00 0.00 30.18 4.09
2122 2397 9.747898 AGTCATCACTAACAAATACCCAATTAA 57.252 29.630 0.00 0.00 0.00 1.40
2156 2431 5.163499 CCCGATAAGCTCTTTCTAGTTGTCT 60.163 44.000 0.00 0.00 0.00 3.41
2157 2432 5.044558 CCCGATAAGCTCTTTCTAGTTGTC 58.955 45.833 0.00 0.00 0.00 3.18
2159 2434 5.012328 ACCCGATAAGCTCTTTCTAGTTG 57.988 43.478 0.00 0.00 0.00 3.16
2194 2470 2.290832 TGACAGCCCATCACTAAATGCA 60.291 45.455 0.00 0.00 0.00 3.96
2211 2487 9.860650 AACTTATAACCAGCCATATATTTGACA 57.139 29.630 0.00 0.00 0.00 3.58
2260 2536 6.745116 TGTTGTGCGCATATATAGTAGAAGT 58.255 36.000 15.91 0.00 0.00 3.01
2273 2549 3.064408 CACAGAGATAATGTTGTGCGCAT 59.936 43.478 15.91 0.00 35.11 4.73
2297 2573 7.945664 ACACCAACAGTTTTATTATCCTTGGTA 59.054 33.333 0.00 0.00 38.44 3.25
2301 2577 6.436218 GGGACACCAACAGTTTTATTATCCTT 59.564 38.462 0.00 0.00 36.50 3.36
2311 2587 1.480545 GCAAAGGGACACCAACAGTTT 59.519 47.619 0.00 0.00 40.13 2.66
2333 2609 3.753272 CAGTGGAGACGAAAATTGGATGT 59.247 43.478 0.00 0.00 0.00 3.06
2340 2616 2.417719 GCAGACAGTGGAGACGAAAAT 58.582 47.619 0.00 0.00 0.00 1.82
2345 2621 0.453793 CTAGGCAGACAGTGGAGACG 59.546 60.000 0.00 0.00 0.00 4.18
2357 2633 1.639298 GCGGTTGAACAGCTAGGCAG 61.639 60.000 13.10 0.00 36.37 4.85
2364 2640 1.578206 GAGGAAGGCGGTTGAACAGC 61.578 60.000 12.01 12.01 38.59 4.40
2370 2646 1.172180 TGCAAAGAGGAAGGCGGTTG 61.172 55.000 0.00 0.00 0.00 3.77
2371 2647 0.251341 ATGCAAAGAGGAAGGCGGTT 60.251 50.000 0.00 0.00 0.00 4.44
2373 2649 1.379642 GGATGCAAAGAGGAAGGCGG 61.380 60.000 0.00 0.00 0.00 6.13
2374 2650 0.393537 AGGATGCAAAGAGGAAGGCG 60.394 55.000 0.00 0.00 0.00 5.52
2376 2652 4.156739 GTGTTTAGGATGCAAAGAGGAAGG 59.843 45.833 0.00 0.00 0.00 3.46
2377 2653 5.006386 AGTGTTTAGGATGCAAAGAGGAAG 58.994 41.667 0.00 0.00 0.00 3.46
2393 2669 2.037381 TGCACGGGTGTATGAGTGTTTA 59.963 45.455 0.25 0.00 36.99 2.01
2400 2676 0.980754 AGGGATGCACGGGTGTATGA 60.981 55.000 7.13 0.00 36.05 2.15
2405 2681 2.436646 GACAGGGATGCACGGGTG 60.437 66.667 0.00 0.00 0.00 4.61
2430 2706 8.248945 AGATTTGATTCATGAACCATTTCAGAC 58.751 33.333 11.07 5.86 45.07 3.51
2431 2707 8.248253 CAGATTTGATTCATGAACCATTTCAGA 58.752 33.333 11.07 6.01 45.07 3.27
2485 2761 3.826157 CACCAAAAGTCCCAGCAATAGAA 59.174 43.478 0.00 0.00 0.00 2.10
2530 2806 9.439500 AGAAACAAAAGTGTAAGTGTACAGTAA 57.561 29.630 3.00 0.00 42.05 2.24
2634 3327 1.358152 TCAAGGTTCAGGTAGGTGGG 58.642 55.000 0.00 0.00 0.00 4.61
2635 3328 3.721087 AATCAAGGTTCAGGTAGGTGG 57.279 47.619 0.00 0.00 0.00 4.61
2644 3337 6.325028 TGTTTGGGAATACAAATCAAGGTTCA 59.675 34.615 0.00 0.00 41.80 3.18
2645 3338 6.754193 TGTTTGGGAATACAAATCAAGGTTC 58.246 36.000 0.00 0.00 41.80 3.62
2680 3373 6.680810 TCTCAGTGCAATCCTTTACAAATTG 58.319 36.000 0.00 0.00 34.30 2.32
2714 3407 1.068055 CATTCCACAGCTGTTTCAGGC 60.068 52.381 18.94 0.00 31.21 4.85
2718 3411 3.181487 ACAACACATTCCACAGCTGTTTC 60.181 43.478 18.94 0.00 0.00 2.78
2766 3459 7.441903 AAACTTATATTTAGGAACGGAGGGA 57.558 36.000 0.00 0.00 0.00 4.20
2767 3460 7.991460 AGAAAACTTATATTTAGGAACGGAGGG 59.009 37.037 0.00 0.00 0.00 4.30
2768 3461 8.959705 AGAAAACTTATATTTAGGAACGGAGG 57.040 34.615 0.00 0.00 0.00 4.30
2796 3489 9.692749 TCCGTATGTAGTTCATATTGAAATCTC 57.307 33.333 0.00 0.00 38.22 2.75
2799 3492 9.778741 ACATCCGTATGTAGTTCATATTGAAAT 57.221 29.630 0.00 0.00 44.66 2.17
2835 3528 8.397906 CGGAGCAAAATGAGTGAATCTAAAATA 58.602 33.333 0.00 0.00 0.00 1.40
2838 3531 5.705441 ACGGAGCAAAATGAGTGAATCTAAA 59.295 36.000 0.00 0.00 0.00 1.85
2839 3532 5.245531 ACGGAGCAAAATGAGTGAATCTAA 58.754 37.500 0.00 0.00 0.00 2.10
2840 3533 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
2841 3534 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
2843 3536 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
2844 3537 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
2845 3538 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
2846 3539 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
2847 3540 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
2848 3541 4.508124 GGACTACATACGGAGCAAAATGAG 59.492 45.833 0.00 0.00 0.00 2.90
2849 3542 4.081365 TGGACTACATACGGAGCAAAATGA 60.081 41.667 0.00 0.00 0.00 2.57
2850 3543 4.188462 TGGACTACATACGGAGCAAAATG 58.812 43.478 0.00 0.00 0.00 2.32
2851 3544 4.481368 TGGACTACATACGGAGCAAAAT 57.519 40.909 0.00 0.00 0.00 1.82
2852 3545 3.965379 TGGACTACATACGGAGCAAAA 57.035 42.857 0.00 0.00 0.00 2.44
2853 3546 5.801531 ATATGGACTACATACGGAGCAAA 57.198 39.130 0.00 0.00 44.41 3.68
2854 3547 5.510690 CCAATATGGACTACATACGGAGCAA 60.511 44.000 0.00 0.00 44.41 3.91
2855 3548 4.021456 CCAATATGGACTACATACGGAGCA 60.021 45.833 0.00 0.00 44.41 4.26
2856 3549 4.219944 TCCAATATGGACTACATACGGAGC 59.780 45.833 0.00 0.00 42.67 4.70
2857 3550 5.977489 TCCAATATGGACTACATACGGAG 57.023 43.478 0.00 0.00 42.67 4.63
2890 3583 9.440761 ACTCTCACCATTCCTAAATATAAGTCT 57.559 33.333 0.00 0.00 0.00 3.24
2896 3589 8.938883 ACATGTACTCTCACCATTCCTAAATAT 58.061 33.333 0.00 0.00 0.00 1.28
2897 3590 8.319057 ACATGTACTCTCACCATTCCTAAATA 57.681 34.615 0.00 0.00 0.00 1.40
2898 3591 7.200434 ACATGTACTCTCACCATTCCTAAAT 57.800 36.000 0.00 0.00 0.00 1.40
2899 3592 6.620877 ACATGTACTCTCACCATTCCTAAA 57.379 37.500 0.00 0.00 0.00 1.85
2900 3593 6.620877 AACATGTACTCTCACCATTCCTAA 57.379 37.500 0.00 0.00 0.00 2.69
2901 3594 7.727578 TTAACATGTACTCTCACCATTCCTA 57.272 36.000 0.00 0.00 0.00 2.94
2902 3595 6.620877 TTAACATGTACTCTCACCATTCCT 57.379 37.500 0.00 0.00 0.00 3.36
2903 3596 7.681939 TTTTAACATGTACTCTCACCATTCC 57.318 36.000 0.00 0.00 0.00 3.01
2932 3625 6.711194 TGGAATTGTCGACAAGTATAACCAAA 59.289 34.615 32.19 12.25 39.47 3.28
2934 3627 5.795972 TGGAATTGTCGACAAGTATAACCA 58.204 37.500 32.19 27.91 39.47 3.67
2935 3628 6.920569 ATGGAATTGTCGACAAGTATAACC 57.079 37.500 32.19 25.99 39.47 2.85
2936 3629 8.495949 CCATATGGAATTGTCGACAAGTATAAC 58.504 37.037 32.19 21.08 36.95 1.89
2947 3640 5.947228 ATACAAGCCATATGGAATTGTCG 57.053 39.130 32.51 16.44 42.13 4.35
2959 3652 6.668645 TCCCTAAACAACATATACAAGCCAT 58.331 36.000 0.00 0.00 0.00 4.40
2963 3656 7.995289 TGCATTCCCTAAACAACATATACAAG 58.005 34.615 0.00 0.00 0.00 3.16
3006 3699 4.464112 CACTTAACCTTTTCGCAAGCTAC 58.536 43.478 0.00 0.00 37.18 3.58
3069 3770 7.713942 AGTGGGTTTGAGAAATTATATACGACC 59.286 37.037 0.00 0.00 0.00 4.79
3095 3797 7.398047 TGTTAAGCCAATAGGTACAGAGAGTTA 59.602 37.037 0.00 0.00 37.19 2.24
3099 3801 5.720041 ACTGTTAAGCCAATAGGTACAGAGA 59.280 40.000 0.00 0.00 36.54 3.10
3117 3820 4.577283 GCCTGTTGGACTACAAAACTGTTA 59.423 41.667 0.00 0.00 41.58 2.41
3128 3831 1.837439 CACCCTATGCCTGTTGGACTA 59.163 52.381 0.00 0.00 34.57 2.59
3130 3833 0.394352 CCACCCTATGCCTGTTGGAC 60.394 60.000 0.00 0.00 34.57 4.02
3168 3872 8.468399 TGCATAGAATTACTGCAATCAATGAAA 58.532 29.630 6.59 0.00 42.53 2.69
3170 3874 7.255346 CCTGCATAGAATTACTGCAATCAATGA 60.255 37.037 9.51 0.00 44.59 2.57
3171 3875 6.861572 CCTGCATAGAATTACTGCAATCAATG 59.138 38.462 9.51 0.00 44.59 2.82
3175 3879 7.496529 TTACCTGCATAGAATTACTGCAATC 57.503 36.000 9.51 0.00 44.59 2.67
3203 3914 1.600916 AAGAGGGAAAGTGGCACGC 60.601 57.895 12.71 5.82 40.45 5.34
3231 3942 4.098044 GCTGTTATTTTCTAGAAAGGGGGC 59.902 45.833 17.05 13.58 0.00 5.80
3232 3943 5.510430 AGCTGTTATTTTCTAGAAAGGGGG 58.490 41.667 17.05 8.66 0.00 5.40
3233 3944 7.468141 AAAGCTGTTATTTTCTAGAAAGGGG 57.532 36.000 17.05 7.79 0.00 4.79
3234 3945 7.119262 TCGAAAGCTGTTATTTTCTAGAAAGGG 59.881 37.037 17.05 7.21 32.48 3.95
3243 3954 9.607285 TTATGAAAGTCGAAAGCTGTTATTTTC 57.393 29.630 0.00 0.00 0.00 2.29
3250 3961 5.619981 GCCATTTATGAAAGTCGAAAGCTGT 60.620 40.000 0.00 0.00 0.00 4.40
3280 3991 2.598565 AGCGAGTATATCTGCCAGGAA 58.401 47.619 0.00 0.00 0.00 3.36
3281 3992 2.294449 AGCGAGTATATCTGCCAGGA 57.706 50.000 0.00 0.00 0.00 3.86
3374 4085 5.689819 GCAATGGCGTACTAAGGATAAATG 58.310 41.667 0.00 0.00 0.00 2.32
3394 4105 6.579666 AGAAATCAGAGCAATAACAAGCAA 57.420 33.333 0.00 0.00 0.00 3.91
3429 4140 8.278639 TCCCATTAAGGAAACAGCTAATCATAA 58.721 33.333 0.00 0.00 41.22 1.90
3489 4201 1.960417 TGTCCAAACGACAGCATGAA 58.040 45.000 0.00 0.00 46.80 2.57
3490 4202 3.696306 TGTCCAAACGACAGCATGA 57.304 47.368 0.00 0.00 46.80 3.07
3505 4217 0.165944 CTTTGAACCGTGCCGATGTC 59.834 55.000 0.00 0.00 0.00 3.06
3511 4223 3.477224 TTGCGCTTTGAACCGTGCC 62.477 57.895 9.73 0.00 35.89 5.01
3515 4227 0.929824 CACAGTTGCGCTTTGAACCG 60.930 55.000 9.73 0.00 0.00 4.44
3527 4239 3.879295 ACAGAAATCAGTCACCACAGTTG 59.121 43.478 0.00 0.00 0.00 3.16
3593 4305 4.096382 ACGTGCAACTTTGTCTCAAGAAAT 59.904 37.500 0.00 0.00 31.75 2.17
3658 4370 8.801882 AAATCCGACTTTTGGAACTTATATCA 57.198 30.769 0.00 0.00 39.39 2.15
3662 4376 7.668469 AGGTAAAATCCGACTTTTGGAACTTAT 59.332 33.333 5.49 0.00 39.39 1.73
3664 4378 5.831525 AGGTAAAATCCGACTTTTGGAACTT 59.168 36.000 5.49 0.00 39.39 2.66
3669 4383 5.449999 GGCATAGGTAAAATCCGACTTTTGG 60.450 44.000 5.49 0.00 31.15 3.28
3671 4385 5.506708 AGGCATAGGTAAAATCCGACTTTT 58.493 37.500 0.00 0.00 33.17 2.27
3681 4395 5.598830 TGTTGTTTTGGAGGCATAGGTAAAA 59.401 36.000 0.00 0.00 0.00 1.52
3684 4398 4.331968 CTGTTGTTTTGGAGGCATAGGTA 58.668 43.478 0.00 0.00 0.00 3.08
3688 4402 3.237268 ACCTGTTGTTTTGGAGGCATA 57.763 42.857 0.00 0.00 0.00 3.14
3707 4421 0.999712 TCCCTCCATTTCCCTGGAAC 59.000 55.000 0.00 0.00 44.59 3.62
3711 4425 3.008485 GCTATACTCCCTCCATTTCCCTG 59.992 52.174 0.00 0.00 0.00 4.45
3718 4432 3.389329 CAGTTGTGCTATACTCCCTCCAT 59.611 47.826 0.00 0.00 0.00 3.41
3771 4485 4.643784 GGCATGAAGACAATGGAGAAATCT 59.356 41.667 0.00 0.00 0.00 2.40
3817 4533 6.376864 CACATTACCAATTTAGTGGATGACCA 59.623 38.462 2.85 0.00 41.65 4.02
3848 4564 5.880332 TCGAAAATAGGTCTTATGCTTTGCT 59.120 36.000 0.00 0.00 0.00 3.91
3854 4570 5.463724 CCAGACTCGAAAATAGGTCTTATGC 59.536 44.000 0.37 0.00 36.99 3.14
3871 4587 4.125703 CCATTACTGAATGAGCCAGACTC 58.874 47.826 0.00 0.00 44.59 3.36
3873 4589 4.142609 TCCATTACTGAATGAGCCAGAC 57.857 45.455 0.00 0.00 44.59 3.51
3874 4590 6.692849 ATATCCATTACTGAATGAGCCAGA 57.307 37.500 0.00 0.00 44.59 3.86
3875 4591 6.349115 GCAATATCCATTACTGAATGAGCCAG 60.349 42.308 0.00 0.00 44.59 4.85
3876 4592 5.474532 GCAATATCCATTACTGAATGAGCCA 59.525 40.000 0.00 0.00 44.59 4.75
3880 4599 6.604171 ACCAGCAATATCCATTACTGAATGA 58.396 36.000 0.00 0.00 44.59 2.57
3917 4636 4.002906 TGAAACGGACAGAAGTATGCTT 57.997 40.909 0.00 0.00 37.71 3.91
3918 4637 3.678056 TGAAACGGACAGAAGTATGCT 57.322 42.857 0.00 0.00 0.00 3.79
3919 4638 4.946784 AATGAAACGGACAGAAGTATGC 57.053 40.909 0.00 0.00 0.00 3.14
3920 4639 6.582295 CCAAAAATGAAACGGACAGAAGTATG 59.418 38.462 0.00 0.00 0.00 2.39
3953 4672 7.255801 GGAAAAGGGAAACTGAAATGTCACATA 60.256 37.037 0.00 0.00 0.00 2.29
4045 4764 2.912771 TGTCACGTGAATTGGTCTTGT 58.087 42.857 21.95 0.00 0.00 3.16
4057 4776 1.217882 GTCTCCAACCTTGTCACGTG 58.782 55.000 9.94 9.94 0.00 4.49
4060 4779 2.554032 CATTGGTCTCCAACCTTGTCAC 59.446 50.000 3.23 0.00 46.95 3.67
4096 4829 2.235402 TCCCTCCATTTCAACTCGGTAC 59.765 50.000 0.00 0.00 0.00 3.34
4098 4831 1.358152 TCCCTCCATTTCAACTCGGT 58.642 50.000 0.00 0.00 0.00 4.69
4203 4942 4.263331 GGTCCAAGTCAATCTTCCCTACAA 60.263 45.833 0.00 0.00 33.63 2.41
4228 4967 8.296713 TGTTAGGCAAGTACAGATCAATTTTTC 58.703 33.333 0.00 0.00 0.00 2.29
4303 5043 4.317671 AAGTGAGGGTCGGAAATATACG 57.682 45.455 0.00 0.00 0.00 3.06
4313 5053 0.541863 ATAGGGCAAAGTGAGGGTCG 59.458 55.000 0.00 0.00 0.00 4.79
4346 5086 9.436957 CATAAGTGTACTGACTAAACTTGGAAT 57.563 33.333 0.00 0.00 33.37 3.01
4475 5215 4.585162 AGCGCCACTACTAAGAGATGTTAT 59.415 41.667 2.29 0.00 0.00 1.89
4496 5236 4.881920 TCAGCAAAAAGGGAAAACATAGC 58.118 39.130 0.00 0.00 0.00 2.97
4499 5239 4.651045 ACTCTCAGCAAAAAGGGAAAACAT 59.349 37.500 0.00 0.00 0.00 2.71
4557 5298 4.155709 TGGATGCCAACCTAAATGTTTCA 58.844 39.130 0.00 0.00 0.00 2.69
4792 5548 9.430399 AAAATATGGTCAAGATCATCCTTCATT 57.570 29.630 0.00 0.00 33.52 2.57
4840 5596 7.120432 ACACTTTAGAAGAAGAAGAATCATGCC 59.880 37.037 0.00 0.00 0.00 4.40
4846 5602 7.387397 CAGCTGACACTTTAGAAGAAGAAGAAT 59.613 37.037 8.42 0.00 0.00 2.40
4849 5605 5.107143 GCAGCTGACACTTTAGAAGAAGAAG 60.107 44.000 20.43 0.00 0.00 2.85
4881 5637 9.660180 GGCACTAGAAAATTAATAGGATAGAGG 57.340 37.037 0.00 0.00 0.00 3.69
4895 5651 8.814038 AGATAGACAAAATGGCACTAGAAAAT 57.186 30.769 0.00 0.00 0.00 1.82
4899 5655 7.418337 TGTAGATAGACAAAATGGCACTAGA 57.582 36.000 0.00 0.00 0.00 2.43
4923 5679 5.129155 CAGTCCTGGAGAAGAGAATCATCTT 59.871 44.000 0.00 0.00 44.18 2.40
4985 5741 5.535333 ACAGCGTAAAAGACAAGTTAGCTA 58.465 37.500 0.00 0.00 0.00 3.32
5003 5759 5.469373 TTCATGCTTCTACAATAACAGCG 57.531 39.130 0.00 0.00 32.85 5.18
5073 5829 0.893270 TTGGTCCATGGTCTTTGCCG 60.893 55.000 12.58 0.00 0.00 5.69
5153 5909 3.699955 TTCGCTGCAGATCCCGTCG 62.700 63.158 20.43 9.73 0.00 5.12
5184 5940 3.698029 GCTTGTTGCTTCACTTCTCAA 57.302 42.857 0.00 0.00 38.95 3.02
5216 5972 6.105333 TGCTGTAGTTTTCTGCAAAAACAAT 58.895 32.000 25.31 15.51 41.60 2.71
5224 5980 4.916983 ACAAATGCTGTAGTTTTCTGCA 57.083 36.364 0.00 0.00 42.08 4.41
5225 5981 5.523369 AGAACAAATGCTGTAGTTTTCTGC 58.477 37.500 0.00 0.00 37.23 4.26
5226 5982 6.638468 GGAAGAACAAATGCTGTAGTTTTCTG 59.362 38.462 5.00 0.00 37.23 3.02
5227 5983 6.321181 TGGAAGAACAAATGCTGTAGTTTTCT 59.679 34.615 0.00 0.00 37.23 2.52
5468 6224 4.739195 GAAGCTATCGAGGTAGCCTTATG 58.261 47.826 13.19 0.00 46.48 1.90
5566 6322 3.055891 TCAAATCGAGGTCAGATTGCTCA 60.056 43.478 0.00 0.00 38.24 4.26
5583 6339 5.596836 AATTGGACGCAACCATATCAAAT 57.403 34.783 0.00 0.00 39.82 2.32
5586 6342 4.013050 TCAAATTGGACGCAACCATATCA 58.987 39.130 0.00 0.00 39.82 2.15
5598 6354 4.240096 CCTGCTTGACAATCAAATTGGAC 58.760 43.478 4.82 0.00 44.42 4.02
5602 6358 4.503643 CCAACCCTGCTTGACAATCAAATT 60.504 41.667 0.00 0.00 35.73 1.82
5665 6421 9.726438 GCCTAACTGGTTAGTTCATTATCATAT 57.274 33.333 16.24 0.00 43.53 1.78
5666 6422 8.934697 AGCCTAACTGGTTAGTTCATTATCATA 58.065 33.333 16.24 0.00 43.53 2.15
5667 6423 7.806180 AGCCTAACTGGTTAGTTCATTATCAT 58.194 34.615 16.24 0.00 43.53 2.45
5668 6424 7.195374 AGCCTAACTGGTTAGTTCATTATCA 57.805 36.000 16.24 0.00 43.53 2.15
5669 6425 9.425577 GATAGCCTAACTGGTTAGTTCATTATC 57.574 37.037 16.24 11.88 43.53 1.75
5670 6426 9.160412 AGATAGCCTAACTGGTTAGTTCATTAT 57.840 33.333 16.24 8.44 43.53 1.28
5671 6427 8.548880 AGATAGCCTAACTGGTTAGTTCATTA 57.451 34.615 16.24 5.16 43.53 1.90
5672 6428 7.419172 GGAGATAGCCTAACTGGTTAGTTCATT 60.419 40.741 16.24 1.65 43.53 2.57
5673 6429 6.042208 GGAGATAGCCTAACTGGTTAGTTCAT 59.958 42.308 16.24 8.07 43.53 2.57
5674 6430 5.363005 GGAGATAGCCTAACTGGTTAGTTCA 59.637 44.000 16.24 4.49 43.53 3.18
5675 6431 5.363005 TGGAGATAGCCTAACTGGTTAGTTC 59.637 44.000 16.24 9.54 43.53 3.01
5677 6433 4.880164 TGGAGATAGCCTAACTGGTTAGT 58.120 43.478 16.24 4.87 40.59 2.24
5678 6434 5.364157 ACTTGGAGATAGCCTAACTGGTTAG 59.636 44.000 12.13 12.13 41.56 2.34
5679 6435 5.278061 ACTTGGAGATAGCCTAACTGGTTA 58.722 41.667 0.00 0.00 38.35 2.85
5680 6436 4.104831 ACTTGGAGATAGCCTAACTGGTT 58.895 43.478 0.00 0.00 38.35 3.67
5681 6437 3.725634 ACTTGGAGATAGCCTAACTGGT 58.274 45.455 0.00 0.00 38.35 4.00
5682 6438 6.349445 CGTATACTTGGAGATAGCCTAACTGG 60.349 46.154 0.56 0.00 39.35 4.00
5683 6439 6.430308 TCGTATACTTGGAGATAGCCTAACTG 59.570 42.308 0.56 0.00 0.00 3.16
5684 6440 6.540995 TCGTATACTTGGAGATAGCCTAACT 58.459 40.000 0.56 0.00 0.00 2.24
5685 6441 6.814506 TCGTATACTTGGAGATAGCCTAAC 57.185 41.667 0.56 0.00 0.00 2.34
5686 6442 9.696572 ATTATCGTATACTTGGAGATAGCCTAA 57.303 33.333 0.56 0.00 0.00 2.69
5687 6443 9.121658 CATTATCGTATACTTGGAGATAGCCTA 57.878 37.037 0.56 0.00 0.00 3.93
5753 6536 9.914131 GAACTAAATAGTTTGCAAGGAAAGATT 57.086 29.630 7.23 0.00 45.84 2.40
5797 6581 4.264352 ACCCTCATAATTTCCCTGCAAAGA 60.264 41.667 0.00 0.00 0.00 2.52
5804 6588 3.881713 GCCACAACCCTCATAATTTCCCT 60.882 47.826 0.00 0.00 0.00 4.20
5963 6748 1.439679 AAATCCCTCGCTTTCGACAC 58.560 50.000 0.00 0.00 40.21 3.67
5969 6755 3.377172 CCACGATAAAAATCCCTCGCTTT 59.623 43.478 0.00 0.00 34.60 3.51
5973 6759 1.260561 CGCCACGATAAAAATCCCTCG 59.739 52.381 0.00 0.00 37.17 4.63
5980 6766 3.757623 GTGCACGCCACGATAAAAA 57.242 47.368 0.00 0.00 34.22 1.94
5994 6780 0.174845 GAGGGTACATAGCGTGTGCA 59.825 55.000 13.37 0.00 44.25 4.57
5996 6782 2.268298 GTTGAGGGTACATAGCGTGTG 58.732 52.381 7.88 0.00 42.24 3.82
6044 6830 6.072286 AGGATAGCAATTGAAAACACTGTGAG 60.072 38.462 15.86 0.00 0.00 3.51
6050 6836 9.860898 AAAGAATAGGATAGCAATTGAAAACAC 57.139 29.630 10.34 0.00 0.00 3.32
6082 6868 6.067350 AGCAGAAAAGAGAACCAAGAAAGAT 58.933 36.000 0.00 0.00 0.00 2.40
6084 6870 5.764487 AGCAGAAAAGAGAACCAAGAAAG 57.236 39.130 0.00 0.00 0.00 2.62
6092 6883 5.757850 TCCAGAAAAGCAGAAAAGAGAAC 57.242 39.130 0.00 0.00 0.00 3.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.