Multiple sequence alignment - TraesCS5B01G373500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G373500 chr5B 100.000 2582 0 0 1 2582 551297022 551299603 0.000000e+00 4769
1 TraesCS5B01G373500 chr5D 93.189 1659 82 14 621 2266 451040329 451041969 0.000000e+00 2409
2 TraesCS5B01G373500 chr5D 95.378 238 8 1 346 580 451040087 451040324 2.430000e-100 375
3 TraesCS5B01G373500 chr5D 86.341 205 22 5 2109 2312 451066757 451066956 4.330000e-53 219
4 TraesCS5B01G373500 chr5A 93.570 1462 64 11 348 1805 570249488 570250923 0.000000e+00 2152
5 TraesCS5B01G373500 chr5A 86.327 490 34 9 1827 2312 570250919 570251379 1.070000e-138 503
6 TraesCS5B01G373500 chr5A 92.059 340 27 0 1 340 493184296 493183957 1.800000e-131 479
7 TraesCS5B01G373500 chr1D 94.848 330 17 0 1 330 436633185 436633514 1.370000e-142 516
8 TraesCS5B01G373500 chr7D 92.353 340 23 1 1 340 577019615 577019951 5.000000e-132 481
9 TraesCS5B01G373500 chr3B 92.059 340 27 0 1 340 765718694 765719033 1.800000e-131 479
10 TraesCS5B01G373500 chr3B 96.565 262 3 2 2321 2582 109000512 109000257 1.840000e-116 429
11 TraesCS5B01G373500 chr3B 96.565 262 3 2 2321 2582 621405614 621405869 1.840000e-116 429
12 TraesCS5B01G373500 chr1A 90.000 340 34 0 1 340 590465408 590465747 8.480000e-120 440
13 TraesCS5B01G373500 chr7A 96.565 262 3 2 2321 2582 117436113 117436368 1.840000e-116 429
14 TraesCS5B01G373500 chr4B 96.183 262 4 2 2321 2582 604453613 604453868 8.540000e-115 424
15 TraesCS5B01G373500 chr4B 95.149 268 7 2 2315 2582 655329222 655329483 3.970000e-113 418
16 TraesCS5B01G373500 chr2B 96.183 262 4 2 2321 2582 361536 361281 8.540000e-115 424
17 TraesCS5B01G373500 chr2B 96.183 262 4 2 2321 2582 781456299 781456554 8.540000e-115 424
18 TraesCS5B01G373500 chr3A 95.522 268 5 4 2315 2582 103594128 103594388 3.070000e-114 422
19 TraesCS5B01G373500 chrUn 95.149 268 7 2 2315 2582 373522183 373522444 3.970000e-113 418
20 TraesCS5B01G373500 chr3D 93.365 211 14 0 1 211 527073724 527073934 1.930000e-81 313


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G373500 chr5B 551297022 551299603 2581 False 4769.0 4769 100.0000 1 2582 1 chr5B.!!$F1 2581
1 TraesCS5B01G373500 chr5D 451040087 451041969 1882 False 1392.0 2409 94.2835 346 2266 2 chr5D.!!$F2 1920
2 TraesCS5B01G373500 chr5A 570249488 570251379 1891 False 1327.5 2152 89.9485 348 2312 2 chr5A.!!$F1 1964

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
328 329 0.03254 GAAAAGCAGGTGGGCAACAG 59.967 55.0 0.0 0.0 39.74 3.16 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2327 2343 0.887836 GGACGAAAGCCCCGTTTTCT 60.888 55.0 0.0 0.0 40.67 2.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 3.059352 GGAAGCATCCAGTAACACACT 57.941 47.619 2.32 0.00 45.79 3.55
49 50 4.349365 GAAGATATCCAAAAACACCCCCA 58.651 43.478 0.00 0.00 0.00 4.96
50 51 4.412060 AGATATCCAAAAACACCCCCAA 57.588 40.909 0.00 0.00 0.00 4.12
51 52 4.757692 AGATATCCAAAAACACCCCCAAA 58.242 39.130 0.00 0.00 0.00 3.28
52 53 5.349690 AGATATCCAAAAACACCCCCAAAT 58.650 37.500 0.00 0.00 0.00 2.32
53 54 5.425217 AGATATCCAAAAACACCCCCAAATC 59.575 40.000 0.00 0.00 0.00 2.17
54 55 2.050918 TCCAAAAACACCCCCAAATCC 58.949 47.619 0.00 0.00 0.00 3.01
55 56 1.073125 CCAAAAACACCCCCAAATCCC 59.927 52.381 0.00 0.00 0.00 3.85
56 57 1.073125 CAAAAACACCCCCAAATCCCC 59.927 52.381 0.00 0.00 0.00 4.81
57 58 0.269173 AAAACACCCCCAAATCCCCA 59.731 50.000 0.00 0.00 0.00 4.96
58 59 0.472925 AAACACCCCCAAATCCCCAC 60.473 55.000 0.00 0.00 0.00 4.61
59 60 1.376249 AACACCCCCAAATCCCCACT 61.376 55.000 0.00 0.00 0.00 4.00
60 61 1.000359 CACCCCCAAATCCCCACTC 60.000 63.158 0.00 0.00 0.00 3.51
61 62 1.151361 ACCCCCAAATCCCCACTCT 60.151 57.895 0.00 0.00 0.00 3.24
62 63 1.214992 ACCCCCAAATCCCCACTCTC 61.215 60.000 0.00 0.00 0.00 3.20
63 64 1.615262 CCCCAAATCCCCACTCTCC 59.385 63.158 0.00 0.00 0.00 3.71
64 65 1.214305 CCCCAAATCCCCACTCTCCA 61.214 60.000 0.00 0.00 0.00 3.86
65 66 0.929244 CCCAAATCCCCACTCTCCAT 59.071 55.000 0.00 0.00 0.00 3.41
66 67 2.135189 CCCAAATCCCCACTCTCCATA 58.865 52.381 0.00 0.00 0.00 2.74
67 68 2.718609 CCCAAATCCCCACTCTCCATAT 59.281 50.000 0.00 0.00 0.00 1.78
68 69 3.140895 CCCAAATCCCCACTCTCCATATT 59.859 47.826 0.00 0.00 0.00 1.28
69 70 4.387891 CCCAAATCCCCACTCTCCATATTT 60.388 45.833 0.00 0.00 0.00 1.40
70 71 5.162991 CCCAAATCCCCACTCTCCATATTTA 60.163 44.000 0.00 0.00 0.00 1.40
71 72 6.469239 CCCAAATCCCCACTCTCCATATTTAT 60.469 42.308 0.00 0.00 0.00 1.40
72 73 6.435277 CCAAATCCCCACTCTCCATATTTATG 59.565 42.308 0.00 0.00 0.00 1.90
86 87 5.813383 CATATTTATGGGGATCAGAGCACT 58.187 41.667 0.00 0.00 0.00 4.40
87 88 3.845781 TTTATGGGGATCAGAGCACTC 57.154 47.619 0.00 0.00 0.00 3.51
88 89 2.783379 TATGGGGATCAGAGCACTCT 57.217 50.000 0.00 0.00 41.37 3.24
89 90 1.890552 ATGGGGATCAGAGCACTCTT 58.109 50.000 0.00 0.00 37.98 2.85
90 91 2.550277 TGGGGATCAGAGCACTCTTA 57.450 50.000 0.00 0.00 37.98 2.10
91 92 3.051940 TGGGGATCAGAGCACTCTTAT 57.948 47.619 0.00 0.00 37.98 1.73
92 93 2.968574 TGGGGATCAGAGCACTCTTATC 59.031 50.000 11.72 11.72 38.79 1.75
93 94 2.968574 GGGGATCAGAGCACTCTTATCA 59.031 50.000 18.73 0.00 40.38 2.15
94 95 3.582208 GGGGATCAGAGCACTCTTATCAT 59.418 47.826 18.73 2.30 40.38 2.45
95 96 4.774726 GGGGATCAGAGCACTCTTATCATA 59.225 45.833 18.73 0.00 40.38 2.15
96 97 5.105392 GGGGATCAGAGCACTCTTATCATAG 60.105 48.000 18.73 0.00 40.38 2.23
97 98 5.480073 GGGATCAGAGCACTCTTATCATAGT 59.520 44.000 18.73 0.00 40.38 2.12
98 99 6.014669 GGGATCAGAGCACTCTTATCATAGTT 60.015 42.308 18.73 0.00 40.38 2.24
99 100 7.177568 GGGATCAGAGCACTCTTATCATAGTTA 59.822 40.741 18.73 0.00 40.38 2.24
100 101 8.580720 GGATCAGAGCACTCTTATCATAGTTAA 58.419 37.037 18.73 0.00 40.38 2.01
103 104 9.973450 TCAGAGCACTCTTATCATAGTTAATTC 57.027 33.333 0.00 0.00 37.98 2.17
104 105 9.979578 CAGAGCACTCTTATCATAGTTAATTCT 57.020 33.333 0.00 0.00 37.98 2.40
106 107 9.973450 GAGCACTCTTATCATAGTTAATTCTCA 57.027 33.333 0.00 0.00 0.00 3.27
125 126 9.550406 AATTCTCATTCAAGAAATTTGCTCAAA 57.450 25.926 0.00 0.00 38.69 2.69
126 127 8.583810 TTCTCATTCAAGAAATTTGCTCAAAG 57.416 30.769 0.00 0.00 32.42 2.77
127 128 6.643770 TCTCATTCAAGAAATTTGCTCAAAGC 59.356 34.615 0.00 0.00 42.82 3.51
140 141 4.053469 GCTCAAAGCAAGTTAAAACCCA 57.947 40.909 0.00 0.00 41.89 4.51
141 142 4.631131 GCTCAAAGCAAGTTAAAACCCAT 58.369 39.130 0.00 0.00 41.89 4.00
142 143 5.056480 GCTCAAAGCAAGTTAAAACCCATT 58.944 37.500 0.00 0.00 41.89 3.16
143 144 5.527214 GCTCAAAGCAAGTTAAAACCCATTT 59.473 36.000 0.00 0.00 41.89 2.32
144 145 6.511605 GCTCAAAGCAAGTTAAAACCCATTTG 60.512 38.462 0.00 0.00 41.89 2.32
145 146 6.644347 TCAAAGCAAGTTAAAACCCATTTGA 58.356 32.000 0.00 0.00 33.20 2.69
146 147 6.760770 TCAAAGCAAGTTAAAACCCATTTGAG 59.239 34.615 0.00 0.00 32.23 3.02
147 148 6.478512 AAGCAAGTTAAAACCCATTTGAGA 57.521 33.333 0.00 0.00 32.27 3.27
148 149 6.670695 AGCAAGTTAAAACCCATTTGAGAT 57.329 33.333 0.00 0.00 32.27 2.75
149 150 7.066307 AGCAAGTTAAAACCCATTTGAGATT 57.934 32.000 0.00 0.00 32.27 2.40
150 151 8.189119 AGCAAGTTAAAACCCATTTGAGATTA 57.811 30.769 0.00 0.00 32.27 1.75
151 152 8.646900 AGCAAGTTAAAACCCATTTGAGATTAA 58.353 29.630 0.00 0.00 32.27 1.40
152 153 8.925700 GCAAGTTAAAACCCATTTGAGATTAAG 58.074 33.333 0.00 0.00 32.27 1.85
153 154 9.423061 CAAGTTAAAACCCATTTGAGATTAAGG 57.577 33.333 0.00 0.00 32.27 2.69
154 155 8.134202 AGTTAAAACCCATTTGAGATTAAGGG 57.866 34.615 0.00 0.00 42.07 3.95
155 156 5.420725 AAAACCCATTTGAGATTAAGGGC 57.579 39.130 0.00 0.00 39.97 5.19
156 157 3.756082 ACCCATTTGAGATTAAGGGCA 57.244 42.857 0.00 0.00 39.97 5.36
157 158 4.059773 ACCCATTTGAGATTAAGGGCAA 57.940 40.909 0.00 0.00 39.97 4.52
158 159 3.769300 ACCCATTTGAGATTAAGGGCAAC 59.231 43.478 0.00 0.00 39.97 4.17
159 160 4.026052 CCCATTTGAGATTAAGGGCAACT 58.974 43.478 0.00 0.00 0.00 3.16
160 161 4.098501 CCCATTTGAGATTAAGGGCAACTC 59.901 45.833 0.00 0.00 0.00 3.01
161 162 4.952335 CCATTTGAGATTAAGGGCAACTCT 59.048 41.667 0.00 0.00 0.00 3.24
162 163 6.122277 CCATTTGAGATTAAGGGCAACTCTA 58.878 40.000 0.00 0.00 0.00 2.43
163 164 6.038714 CCATTTGAGATTAAGGGCAACTCTAC 59.961 42.308 0.00 0.00 0.00 2.59
164 165 6.374417 TTTGAGATTAAGGGCAACTCTACT 57.626 37.500 0.00 0.00 0.00 2.57
165 166 7.490657 TTTGAGATTAAGGGCAACTCTACTA 57.509 36.000 0.00 0.00 0.00 1.82
166 167 7.676683 TTGAGATTAAGGGCAACTCTACTAT 57.323 36.000 0.00 0.00 0.00 2.12
167 168 7.291411 TGAGATTAAGGGCAACTCTACTATC 57.709 40.000 0.00 0.00 0.00 2.08
168 169 6.839134 TGAGATTAAGGGCAACTCTACTATCA 59.161 38.462 0.00 0.00 0.00 2.15
169 170 7.510685 TGAGATTAAGGGCAACTCTACTATCAT 59.489 37.037 0.00 0.00 0.00 2.45
170 171 8.268878 AGATTAAGGGCAACTCTACTATCATT 57.731 34.615 0.00 0.00 0.00 2.57
171 172 8.718656 AGATTAAGGGCAACTCTACTATCATTT 58.281 33.333 0.00 0.00 0.00 2.32
172 173 9.343539 GATTAAGGGCAACTCTACTATCATTTT 57.656 33.333 0.00 0.00 0.00 1.82
173 174 9.700831 ATTAAGGGCAACTCTACTATCATTTTT 57.299 29.630 0.00 0.00 0.00 1.94
174 175 7.631717 AAGGGCAACTCTACTATCATTTTTC 57.368 36.000 0.00 0.00 0.00 2.29
175 176 6.721318 AGGGCAACTCTACTATCATTTTTCA 58.279 36.000 0.00 0.00 0.00 2.69
176 177 6.825721 AGGGCAACTCTACTATCATTTTTCAG 59.174 38.462 0.00 0.00 0.00 3.02
177 178 6.038714 GGGCAACTCTACTATCATTTTTCAGG 59.961 42.308 0.00 0.00 0.00 3.86
178 179 6.823689 GGCAACTCTACTATCATTTTTCAGGA 59.176 38.462 0.00 0.00 0.00 3.86
179 180 7.336931 GGCAACTCTACTATCATTTTTCAGGAA 59.663 37.037 0.00 0.00 0.00 3.36
180 181 8.730680 GCAACTCTACTATCATTTTTCAGGAAA 58.269 33.333 0.00 0.00 0.00 3.13
188 189 9.136323 ACTATCATTTTTCAGGAAAAGAAGTGT 57.864 29.630 7.21 2.72 40.35 3.55
192 193 9.130661 TCATTTTTCAGGAAAAGAAGTGTATCA 57.869 29.630 7.21 0.00 40.35 2.15
193 194 9.918630 CATTTTTCAGGAAAAGAAGTGTATCAT 57.081 29.630 7.21 0.00 40.35 2.45
195 196 8.924511 TTTTCAGGAAAAGAAGTGTATCATCT 57.075 30.769 3.19 0.00 35.57 2.90
196 197 7.912056 TTCAGGAAAAGAAGTGTATCATCTG 57.088 36.000 0.00 0.00 0.00 2.90
197 198 5.877012 TCAGGAAAAGAAGTGTATCATCTGC 59.123 40.000 0.00 0.00 0.00 4.26
198 199 5.645067 CAGGAAAAGAAGTGTATCATCTGCA 59.355 40.000 0.00 0.00 0.00 4.41
199 200 6.318144 CAGGAAAAGAAGTGTATCATCTGCAT 59.682 38.462 0.00 0.00 0.00 3.96
200 201 7.496920 CAGGAAAAGAAGTGTATCATCTGCATA 59.503 37.037 0.00 0.00 0.00 3.14
201 202 7.497249 AGGAAAAGAAGTGTATCATCTGCATAC 59.503 37.037 0.00 0.00 0.00 2.39
202 203 7.497249 GGAAAAGAAGTGTATCATCTGCATACT 59.503 37.037 0.00 0.00 0.00 2.12
203 204 9.534565 GAAAAGAAGTGTATCATCTGCATACTA 57.465 33.333 0.00 0.00 0.00 1.82
204 205 8.879342 AAAGAAGTGTATCATCTGCATACTAC 57.121 34.615 0.00 0.00 0.00 2.73
205 206 7.588497 AGAAGTGTATCATCTGCATACTACA 57.412 36.000 0.00 0.00 0.00 2.74
206 207 7.656412 AGAAGTGTATCATCTGCATACTACAG 58.344 38.462 0.00 0.00 36.44 2.74
208 209 6.976088 AGTGTATCATCTGCATACTACAGAC 58.024 40.000 0.00 0.00 46.38 3.51
209 210 6.547510 AGTGTATCATCTGCATACTACAGACA 59.452 38.462 0.00 0.00 46.38 3.41
210 211 6.638873 GTGTATCATCTGCATACTACAGACAC 59.361 42.308 0.00 0.00 46.38 3.67
211 212 5.859205 ATCATCTGCATACTACAGACACA 57.141 39.130 0.00 0.00 46.38 3.72
212 213 5.859205 TCATCTGCATACTACAGACACAT 57.141 39.130 0.00 0.00 46.38 3.21
213 214 5.836347 TCATCTGCATACTACAGACACATC 58.164 41.667 0.00 0.00 46.38 3.06
214 215 5.360714 TCATCTGCATACTACAGACACATCA 59.639 40.000 0.00 0.00 46.38 3.07
215 216 4.998788 TCTGCATACTACAGACACATCAC 58.001 43.478 0.00 0.00 39.21 3.06
216 217 4.706962 TCTGCATACTACAGACACATCACT 59.293 41.667 0.00 0.00 39.21 3.41
217 218 4.998788 TGCATACTACAGACACATCACTC 58.001 43.478 0.00 0.00 0.00 3.51
218 219 4.142160 TGCATACTACAGACACATCACTCC 60.142 45.833 0.00 0.00 0.00 3.85
219 220 4.098654 GCATACTACAGACACATCACTCCT 59.901 45.833 0.00 0.00 0.00 3.69
220 221 5.734786 GCATACTACAGACACATCACTCCTC 60.735 48.000 0.00 0.00 0.00 3.71
221 222 3.093057 ACTACAGACACATCACTCCTCC 58.907 50.000 0.00 0.00 0.00 4.30
222 223 2.317371 ACAGACACATCACTCCTCCT 57.683 50.000 0.00 0.00 0.00 3.69
223 224 2.175202 ACAGACACATCACTCCTCCTC 58.825 52.381 0.00 0.00 0.00 3.71
224 225 2.225242 ACAGACACATCACTCCTCCTCT 60.225 50.000 0.00 0.00 0.00 3.69
225 226 3.010696 ACAGACACATCACTCCTCCTCTA 59.989 47.826 0.00 0.00 0.00 2.43
226 227 4.019858 CAGACACATCACTCCTCCTCTAA 58.980 47.826 0.00 0.00 0.00 2.10
227 228 4.020543 AGACACATCACTCCTCCTCTAAC 58.979 47.826 0.00 0.00 0.00 2.34
228 229 4.020543 GACACATCACTCCTCCTCTAACT 58.979 47.826 0.00 0.00 0.00 2.24
229 230 5.044772 AGACACATCACTCCTCCTCTAACTA 60.045 44.000 0.00 0.00 0.00 2.24
230 231 5.580998 ACACATCACTCCTCCTCTAACTAA 58.419 41.667 0.00 0.00 0.00 2.24
231 232 6.198639 ACACATCACTCCTCCTCTAACTAAT 58.801 40.000 0.00 0.00 0.00 1.73
232 233 6.670027 ACACATCACTCCTCCTCTAACTAATT 59.330 38.462 0.00 0.00 0.00 1.40
233 234 7.147811 ACACATCACTCCTCCTCTAACTAATTC 60.148 40.741 0.00 0.00 0.00 2.17
234 235 6.325286 ACATCACTCCTCCTCTAACTAATTCC 59.675 42.308 0.00 0.00 0.00 3.01
235 236 4.888239 TCACTCCTCCTCTAACTAATTCCG 59.112 45.833 0.00 0.00 0.00 4.30
236 237 4.038162 CACTCCTCCTCTAACTAATTCCGG 59.962 50.000 0.00 0.00 0.00 5.14
237 238 3.573695 TCCTCCTCTAACTAATTCCGGG 58.426 50.000 0.00 0.00 0.00 5.73
238 239 2.037381 CCTCCTCTAACTAATTCCGGGC 59.963 54.545 0.00 0.00 0.00 6.13
239 240 2.698797 CTCCTCTAACTAATTCCGGGCA 59.301 50.000 0.00 0.00 0.00 5.36
240 241 2.433239 TCCTCTAACTAATTCCGGGCAC 59.567 50.000 0.00 0.00 0.00 5.01
241 242 2.169769 CCTCTAACTAATTCCGGGCACA 59.830 50.000 0.00 0.00 0.00 4.57
242 243 3.370103 CCTCTAACTAATTCCGGGCACAA 60.370 47.826 0.00 0.00 0.00 3.33
243 244 3.602483 TCTAACTAATTCCGGGCACAAC 58.398 45.455 0.00 0.00 0.00 3.32
244 245 1.541379 AACTAATTCCGGGCACAACC 58.459 50.000 0.00 0.00 37.93 3.77
254 255 3.737702 GGCACAACCCTCTAACCAA 57.262 52.632 0.00 0.00 0.00 3.67
255 256 1.534729 GGCACAACCCTCTAACCAAG 58.465 55.000 0.00 0.00 0.00 3.61
256 257 0.881796 GCACAACCCTCTAACCAAGC 59.118 55.000 0.00 0.00 0.00 4.01
257 258 1.534729 CACAACCCTCTAACCAAGCC 58.465 55.000 0.00 0.00 0.00 4.35
258 259 1.145571 ACAACCCTCTAACCAAGCCA 58.854 50.000 0.00 0.00 0.00 4.75
259 260 1.073923 ACAACCCTCTAACCAAGCCAG 59.926 52.381 0.00 0.00 0.00 4.85
260 261 0.038310 AACCCTCTAACCAAGCCAGC 59.962 55.000 0.00 0.00 0.00 4.85
261 262 1.077429 CCCTCTAACCAAGCCAGCC 60.077 63.158 0.00 0.00 0.00 4.85
262 263 1.077429 CCTCTAACCAAGCCAGCCC 60.077 63.158 0.00 0.00 0.00 5.19
263 264 1.450312 CTCTAACCAAGCCAGCCCG 60.450 63.158 0.00 0.00 0.00 6.13
264 265 1.899437 CTCTAACCAAGCCAGCCCGA 61.899 60.000 0.00 0.00 0.00 5.14
265 266 1.450312 CTAACCAAGCCAGCCCGAG 60.450 63.158 0.00 0.00 0.00 4.63
266 267 3.622060 TAACCAAGCCAGCCCGAGC 62.622 63.158 0.00 0.00 40.32 5.03
269 270 4.711949 CAAGCCAGCCCGAGCACT 62.712 66.667 0.00 0.00 43.56 4.40
270 271 3.958860 AAGCCAGCCCGAGCACTT 61.959 61.111 0.00 0.00 43.56 3.16
271 272 3.497884 AAGCCAGCCCGAGCACTTT 62.498 57.895 0.00 0.00 43.56 2.66
272 273 3.435186 GCCAGCCCGAGCACTTTC 61.435 66.667 0.00 0.00 43.56 2.62
273 274 2.032528 CCAGCCCGAGCACTTTCA 59.967 61.111 0.00 0.00 43.56 2.69
274 275 1.377725 CCAGCCCGAGCACTTTCAT 60.378 57.895 0.00 0.00 43.56 2.57
275 276 1.372087 CCAGCCCGAGCACTTTCATC 61.372 60.000 0.00 0.00 43.56 2.92
276 277 0.392193 CAGCCCGAGCACTTTCATCT 60.392 55.000 0.00 0.00 43.56 2.90
277 278 1.134699 CAGCCCGAGCACTTTCATCTA 60.135 52.381 0.00 0.00 43.56 1.98
278 279 1.765314 AGCCCGAGCACTTTCATCTAT 59.235 47.619 0.00 0.00 43.56 1.98
279 280 2.139118 GCCCGAGCACTTTCATCTATC 58.861 52.381 0.00 0.00 39.53 2.08
280 281 2.483714 GCCCGAGCACTTTCATCTATCA 60.484 50.000 0.00 0.00 39.53 2.15
281 282 3.805108 GCCCGAGCACTTTCATCTATCAT 60.805 47.826 0.00 0.00 39.53 2.45
282 283 4.384056 CCCGAGCACTTTCATCTATCATT 58.616 43.478 0.00 0.00 0.00 2.57
283 284 4.450419 CCCGAGCACTTTCATCTATCATTC 59.550 45.833 0.00 0.00 0.00 2.67
284 285 5.295950 CCGAGCACTTTCATCTATCATTCT 58.704 41.667 0.00 0.00 0.00 2.40
285 286 6.450545 CCGAGCACTTTCATCTATCATTCTA 58.549 40.000 0.00 0.00 0.00 2.10
286 287 6.585702 CCGAGCACTTTCATCTATCATTCTAG 59.414 42.308 0.00 0.00 0.00 2.43
287 288 6.089283 CGAGCACTTTCATCTATCATTCTAGC 59.911 42.308 0.00 0.00 0.00 3.42
288 289 6.824553 AGCACTTTCATCTATCATTCTAGCA 58.175 36.000 0.00 0.00 0.00 3.49
289 290 7.278135 AGCACTTTCATCTATCATTCTAGCAA 58.722 34.615 0.00 0.00 0.00 3.91
290 291 7.772292 AGCACTTTCATCTATCATTCTAGCAAA 59.228 33.333 0.00 0.00 0.00 3.68
291 292 8.400947 GCACTTTCATCTATCATTCTAGCAAAA 58.599 33.333 0.00 0.00 0.00 2.44
292 293 9.932699 CACTTTCATCTATCATTCTAGCAAAAG 57.067 33.333 0.00 0.00 0.00 2.27
293 294 9.678260 ACTTTCATCTATCATTCTAGCAAAAGT 57.322 29.630 0.00 0.00 0.00 2.66
294 295 9.932699 CTTTCATCTATCATTCTAGCAAAAGTG 57.067 33.333 0.00 0.00 0.00 3.16
295 296 9.453572 TTTCATCTATCATTCTAGCAAAAGTGT 57.546 29.630 0.00 0.00 0.00 3.55
296 297 8.654230 TCATCTATCATTCTAGCAAAAGTGTC 57.346 34.615 0.00 0.00 0.00 3.67
297 298 8.481314 TCATCTATCATTCTAGCAAAAGTGTCT 58.519 33.333 0.00 0.00 0.00 3.41
298 299 9.755804 CATCTATCATTCTAGCAAAAGTGTCTA 57.244 33.333 0.00 0.00 0.00 2.59
299 300 9.757227 ATCTATCATTCTAGCAAAAGTGTCTAC 57.243 33.333 0.00 0.00 0.00 2.59
300 301 8.198109 TCTATCATTCTAGCAAAAGTGTCTACC 58.802 37.037 0.00 0.00 0.00 3.18
301 302 6.109156 TCATTCTAGCAAAAGTGTCTACCA 57.891 37.500 0.00 0.00 0.00 3.25
302 303 5.932303 TCATTCTAGCAAAAGTGTCTACCAC 59.068 40.000 0.00 0.00 44.89 4.16
303 304 4.267349 TCTAGCAAAAGTGTCTACCACC 57.733 45.455 0.00 0.00 45.74 4.61
304 305 3.644265 TCTAGCAAAAGTGTCTACCACCA 59.356 43.478 0.00 0.00 45.74 4.17
305 306 2.851195 AGCAAAAGTGTCTACCACCAG 58.149 47.619 0.00 0.00 45.74 4.00
306 307 2.438021 AGCAAAAGTGTCTACCACCAGA 59.562 45.455 0.00 0.00 45.74 3.86
307 308 3.073062 AGCAAAAGTGTCTACCACCAGAT 59.927 43.478 0.00 0.00 45.74 2.90
308 309 3.821033 GCAAAAGTGTCTACCACCAGATT 59.179 43.478 0.00 0.00 45.74 2.40
309 310 4.320494 GCAAAAGTGTCTACCACCAGATTG 60.320 45.833 0.00 0.00 45.74 2.67
310 311 4.974645 AAAGTGTCTACCACCAGATTGA 57.025 40.909 0.00 0.00 45.74 2.57
311 312 4.974645 AAGTGTCTACCACCAGATTGAA 57.025 40.909 0.00 0.00 45.74 2.69
312 313 4.974645 AGTGTCTACCACCAGATTGAAA 57.025 40.909 0.00 0.00 45.74 2.69
313 314 5.304686 AGTGTCTACCACCAGATTGAAAA 57.695 39.130 0.00 0.00 45.74 2.29
314 315 5.308825 AGTGTCTACCACCAGATTGAAAAG 58.691 41.667 0.00 0.00 45.74 2.27
315 316 4.072131 TGTCTACCACCAGATTGAAAAGC 58.928 43.478 0.00 0.00 0.00 3.51
316 317 4.072131 GTCTACCACCAGATTGAAAAGCA 58.928 43.478 0.00 0.00 32.26 3.91
317 318 4.154918 GTCTACCACCAGATTGAAAAGCAG 59.845 45.833 0.00 0.00 32.26 4.24
318 319 2.242043 ACCACCAGATTGAAAAGCAGG 58.758 47.619 0.00 0.00 45.19 4.85
322 323 1.547372 CCAGATTGAAAAGCAGGTGGG 59.453 52.381 0.00 0.00 33.84 4.61
323 324 1.067354 CAGATTGAAAAGCAGGTGGGC 60.067 52.381 0.00 0.00 32.26 5.36
324 325 0.968405 GATTGAAAAGCAGGTGGGCA 59.032 50.000 0.00 0.00 35.83 5.36
325 326 1.344114 GATTGAAAAGCAGGTGGGCAA 59.656 47.619 0.00 0.00 35.83 4.52
326 327 0.463620 TTGAAAAGCAGGTGGGCAAC 59.536 50.000 0.00 0.00 35.83 4.17
327 328 0.685785 TGAAAAGCAGGTGGGCAACA 60.686 50.000 0.00 0.00 39.74 3.33
328 329 0.032540 GAAAAGCAGGTGGGCAACAG 59.967 55.000 0.00 0.00 39.74 3.16
329 330 1.402107 AAAAGCAGGTGGGCAACAGG 61.402 55.000 0.00 0.00 39.74 4.00
330 331 4.982701 AGCAGGTGGGCAACAGGC 62.983 66.667 0.00 0.00 43.74 4.85
331 332 4.982701 GCAGGTGGGCAACAGGCT 62.983 66.667 0.00 0.00 44.01 4.58
332 333 2.674380 CAGGTGGGCAACAGGCTC 60.674 66.667 0.00 0.00 46.04 4.70
333 334 2.856000 AGGTGGGCAACAGGCTCT 60.856 61.111 0.00 0.00 46.01 4.09
334 335 2.360475 GGTGGGCAACAGGCTCTC 60.360 66.667 0.00 0.00 46.01 3.20
335 336 2.360475 GTGGGCAACAGGCTCTCC 60.360 66.667 0.00 0.00 46.01 3.71
336 337 2.530151 TGGGCAACAGGCTCTCCT 60.530 61.111 0.00 0.00 46.01 3.69
337 338 2.156098 TGGGCAACAGGCTCTCCTT 61.156 57.895 0.00 0.00 46.01 3.36
338 339 1.676967 GGGCAACAGGCTCTCCTTG 60.677 63.158 0.00 0.00 41.93 3.61
339 340 2.338785 GGCAACAGGCTCTCCTTGC 61.339 63.158 7.03 7.03 41.93 4.01
340 341 1.601759 GCAACAGGCTCTCCTTGCA 60.602 57.895 9.64 0.00 41.93 4.08
341 342 1.584380 GCAACAGGCTCTCCTTGCAG 61.584 60.000 9.64 0.00 41.93 4.41
342 343 0.035881 CAACAGGCTCTCCTTGCAGA 59.964 55.000 0.00 0.00 41.93 4.26
343 344 0.036022 AACAGGCTCTCCTTGCAGAC 59.964 55.000 0.00 0.00 41.93 3.51
344 345 1.123861 ACAGGCTCTCCTTGCAGACA 61.124 55.000 0.00 0.00 41.93 3.41
372 373 6.350949 TCAACTTTTGATGCCCTAAAATAGGC 60.351 38.462 0.00 0.00 41.36 3.93
382 383 3.620488 CCTAAAATAGGCCAGCTGTTGA 58.380 45.455 13.81 0.00 39.48 3.18
416 417 1.589803 CGGTCCCGGAAAATACATCC 58.410 55.000 0.73 0.00 35.56 3.51
589 593 2.361104 TCGCTGCCCAACATTCCC 60.361 61.111 0.00 0.00 0.00 3.97
778 786 1.903404 CTGCCCCGCCCCAATAATC 60.903 63.158 0.00 0.00 0.00 1.75
779 787 2.600470 GCCCCGCCCCAATAATCC 60.600 66.667 0.00 0.00 0.00 3.01
780 788 2.931107 CCCCGCCCCAATAATCCA 59.069 61.111 0.00 0.00 0.00 3.41
781 789 1.231641 CCCCGCCCCAATAATCCAA 59.768 57.895 0.00 0.00 0.00 3.53
782 790 0.178935 CCCCGCCCCAATAATCCAAT 60.179 55.000 0.00 0.00 0.00 3.16
783 791 1.076350 CCCCGCCCCAATAATCCAATA 59.924 52.381 0.00 0.00 0.00 1.90
784 792 2.491825 CCCCGCCCCAATAATCCAATAA 60.492 50.000 0.00 0.00 0.00 1.40
785 793 3.440127 CCCGCCCCAATAATCCAATAAT 58.560 45.455 0.00 0.00 0.00 1.28
786 794 3.195396 CCCGCCCCAATAATCCAATAATG 59.805 47.826 0.00 0.00 0.00 1.90
857 865 0.167908 CAGCAACCATTTAAGCGCGA 59.832 50.000 12.10 0.00 0.00 5.87
878 886 4.077184 TCGTCATCCACCCACGCC 62.077 66.667 0.00 0.00 33.46 5.68
1284 1292 2.528743 CGTATGCTGCTGCTTCCCG 61.529 63.158 17.00 11.86 40.48 5.14
1509 1517 1.753078 GGCGGGGGAAATGGAGAAC 60.753 63.158 0.00 0.00 0.00 3.01
1586 1594 1.482278 GACGAGAACAGATGATCGGC 58.518 55.000 0.00 5.00 39.42 5.54
1680 1692 1.607251 GCTTCCTTCGTTTTCCTCGGA 60.607 52.381 0.00 0.00 0.00 4.55
1765 1777 7.743116 TTCTTGTTCCACCTTATATCCACTA 57.257 36.000 0.00 0.00 0.00 2.74
1806 1818 1.888512 TGTTGGGTGTACGTCCTCTAC 59.111 52.381 0.00 0.00 0.00 2.59
1821 1833 4.695928 GTCCTCTACAAGGGAAATGAACAC 59.304 45.833 0.00 0.00 46.23 3.32
1941 1953 1.354337 CTCAATGGCGACGGACACAG 61.354 60.000 0.00 0.00 30.56 3.66
2015 2027 2.140717 ACCTTAACAACTTCTTCGCCG 58.859 47.619 0.00 0.00 0.00 6.46
2037 2049 6.678900 GCCGATAAAGCATTTGATGAGTCTTT 60.679 38.462 0.00 0.00 39.63 2.52
2121 2134 2.859165 TGCAAGGGTGAAAGGTAGAG 57.141 50.000 0.00 0.00 0.00 2.43
2126 2139 4.626529 GCAAGGGTGAAAGGTAGAGCTATT 60.627 45.833 0.00 0.00 0.00 1.73
2129 2142 5.530243 AGGGTGAAAGGTAGAGCTATTACT 58.470 41.667 7.56 0.00 0.00 2.24
2191 2205 6.872547 GCTAGCTCTGATTGTAATCATGATGA 59.127 38.462 9.46 0.00 43.87 2.92
2261 2276 2.125106 CCGAGGCAGCCAAGGTAC 60.125 66.667 15.80 0.00 0.00 3.34
2263 2278 2.954684 CGAGGCAGCCAAGGTACCA 61.955 63.158 15.80 0.00 0.00 3.25
2306 2322 2.125106 GAGTCATGGCGGACACCC 60.125 66.667 11.06 0.00 40.29 4.61
2315 2331 4.087892 CGGACACCCTGCCCTCAG 62.088 72.222 0.00 0.00 40.02 3.35
2316 2332 4.416738 GGACACCCTGCCCTCAGC 62.417 72.222 0.00 0.00 39.00 4.26
2317 2333 4.416738 GACACCCTGCCCTCAGCC 62.417 72.222 0.00 0.00 42.71 4.85
2319 2335 4.729918 CACCCTGCCCTCAGCCAC 62.730 72.222 0.00 0.00 42.71 5.01
2322 2338 4.729918 CCTGCCCTCAGCCACCAC 62.730 72.222 0.00 0.00 42.71 4.16
2323 2339 3.644606 CTGCCCTCAGCCACCACT 61.645 66.667 0.00 0.00 42.71 4.00
2324 2340 2.203922 TGCCCTCAGCCACCACTA 60.204 61.111 0.00 0.00 42.71 2.74
2325 2341 2.249413 CTGCCCTCAGCCACCACTAG 62.249 65.000 0.00 0.00 42.71 2.57
2326 2342 2.294078 GCCCTCAGCCACCACTAGT 61.294 63.158 0.00 0.00 34.35 2.57
2327 2343 0.976073 GCCCTCAGCCACCACTAGTA 60.976 60.000 0.00 0.00 34.35 1.82
2328 2344 1.115467 CCCTCAGCCACCACTAGTAG 58.885 60.000 0.00 0.00 0.00 2.57
2329 2345 1.342076 CCCTCAGCCACCACTAGTAGA 60.342 57.143 3.59 0.00 0.00 2.59
2330 2346 2.457598 CCTCAGCCACCACTAGTAGAA 58.542 52.381 3.59 0.00 0.00 2.10
2331 2347 2.832129 CCTCAGCCACCACTAGTAGAAA 59.168 50.000 3.59 0.00 0.00 2.52
2332 2348 3.260884 CCTCAGCCACCACTAGTAGAAAA 59.739 47.826 3.59 0.00 0.00 2.29
2333 2349 4.246458 CTCAGCCACCACTAGTAGAAAAC 58.754 47.826 3.59 0.00 0.00 2.43
2334 2350 2.993899 CAGCCACCACTAGTAGAAAACG 59.006 50.000 3.59 0.00 0.00 3.60
2335 2351 2.028385 AGCCACCACTAGTAGAAAACGG 60.028 50.000 3.59 0.00 0.00 4.44
2336 2352 2.933928 GCCACCACTAGTAGAAAACGGG 60.934 54.545 3.59 0.00 0.00 5.28
2337 2353 2.354403 CCACCACTAGTAGAAAACGGGG 60.354 54.545 3.59 0.00 0.00 5.73
2338 2354 1.277273 ACCACTAGTAGAAAACGGGGC 59.723 52.381 3.59 0.00 0.00 5.80
2339 2355 1.553704 CCACTAGTAGAAAACGGGGCT 59.446 52.381 3.59 0.00 0.00 5.19
2340 2356 2.027469 CCACTAGTAGAAAACGGGGCTT 60.027 50.000 3.59 0.00 0.00 4.35
2341 2357 3.558533 CCACTAGTAGAAAACGGGGCTTT 60.559 47.826 3.59 0.00 0.00 3.51
2342 2358 3.683340 CACTAGTAGAAAACGGGGCTTTC 59.317 47.826 3.59 0.00 33.75 2.62
2343 2359 1.804601 AGTAGAAAACGGGGCTTTCG 58.195 50.000 0.00 0.00 37.76 3.46
2344 2360 1.071228 AGTAGAAAACGGGGCTTTCGT 59.929 47.619 0.00 0.00 43.14 3.85
2345 2361 1.462283 GTAGAAAACGGGGCTTTCGTC 59.538 52.381 0.00 0.00 40.18 4.20
2346 2362 0.887836 AGAAAACGGGGCTTTCGTCC 60.888 55.000 0.00 0.00 40.18 4.79
2347 2363 1.152922 AAAACGGGGCTTTCGTCCA 60.153 52.632 0.00 0.00 40.18 4.02
2348 2364 1.170290 AAAACGGGGCTTTCGTCCAG 61.170 55.000 0.00 0.00 40.18 3.86
2349 2365 3.546714 AACGGGGCTTTCGTCCAGG 62.547 63.158 0.00 0.00 40.18 4.45
2353 2369 2.747855 GGCTTTCGTCCAGGCCAG 60.748 66.667 5.01 0.00 43.59 4.85
2354 2370 2.032681 GCTTTCGTCCAGGCCAGT 59.967 61.111 5.01 0.00 0.00 4.00
2355 2371 1.600916 GCTTTCGTCCAGGCCAGTT 60.601 57.895 5.01 0.00 0.00 3.16
2356 2372 1.172812 GCTTTCGTCCAGGCCAGTTT 61.173 55.000 5.01 0.00 0.00 2.66
2357 2373 1.880646 GCTTTCGTCCAGGCCAGTTTA 60.881 52.381 5.01 0.00 0.00 2.01
2358 2374 2.076863 CTTTCGTCCAGGCCAGTTTAG 58.923 52.381 5.01 0.00 0.00 1.85
2359 2375 0.321298 TTCGTCCAGGCCAGTTTAGC 60.321 55.000 5.01 0.00 0.00 3.09
2367 2383 2.437085 GGCCAGTTTAGCCCATTAGT 57.563 50.000 0.00 0.00 45.16 2.24
2368 2384 2.298610 GGCCAGTTTAGCCCATTAGTC 58.701 52.381 0.00 0.00 45.16 2.59
2369 2385 2.298610 GCCAGTTTAGCCCATTAGTCC 58.701 52.381 0.00 0.00 0.00 3.85
2370 2386 2.932261 CCAGTTTAGCCCATTAGTCCC 58.068 52.381 0.00 0.00 0.00 4.46
2371 2387 2.561569 CAGTTTAGCCCATTAGTCCCG 58.438 52.381 0.00 0.00 0.00 5.14
2372 2388 1.489230 AGTTTAGCCCATTAGTCCCGG 59.511 52.381 0.00 0.00 0.00 5.73
2373 2389 1.211212 GTTTAGCCCATTAGTCCCGGT 59.789 52.381 0.00 0.00 0.00 5.28
2374 2390 1.587066 TTAGCCCATTAGTCCCGGTT 58.413 50.000 0.00 0.00 0.00 4.44
2375 2391 1.125633 TAGCCCATTAGTCCCGGTTC 58.874 55.000 0.00 0.00 0.00 3.62
2376 2392 0.912487 AGCCCATTAGTCCCGGTTCA 60.912 55.000 0.00 0.00 0.00 3.18
2377 2393 0.034863 GCCCATTAGTCCCGGTTCAA 60.035 55.000 0.00 0.00 0.00 2.69
2378 2394 1.409661 GCCCATTAGTCCCGGTTCAAT 60.410 52.381 0.00 0.00 0.00 2.57
2379 2395 2.572290 CCCATTAGTCCCGGTTCAATC 58.428 52.381 0.00 0.00 0.00 2.67
2380 2396 2.572290 CCATTAGTCCCGGTTCAATCC 58.428 52.381 0.00 0.00 0.00 3.01
2381 2397 2.092646 CCATTAGTCCCGGTTCAATCCA 60.093 50.000 0.00 0.00 0.00 3.41
2382 2398 3.206150 CATTAGTCCCGGTTCAATCCAG 58.794 50.000 0.00 0.00 0.00 3.86
2383 2399 2.241281 TAGTCCCGGTTCAATCCAGA 57.759 50.000 0.00 0.00 0.00 3.86
2384 2400 1.358152 AGTCCCGGTTCAATCCAGAA 58.642 50.000 0.00 0.00 0.00 3.02
2385 2401 1.003233 AGTCCCGGTTCAATCCAGAAC 59.997 52.381 0.00 0.00 45.50 3.01
2390 2406 3.948735 GTTCAATCCAGAACCGGGA 57.051 52.632 6.32 0.00 41.52 5.14
2391 2407 1.450025 GTTCAATCCAGAACCGGGAC 58.550 55.000 6.32 0.00 41.52 4.46
2392 2408 0.326927 TTCAATCCAGAACCGGGACC 59.673 55.000 6.32 0.00 37.23 4.46
2393 2409 0.838554 TCAATCCAGAACCGGGACCA 60.839 55.000 6.32 0.00 37.23 4.02
2394 2410 0.037590 CAATCCAGAACCGGGACCAA 59.962 55.000 6.32 0.00 37.23 3.67
2395 2411 0.999712 AATCCAGAACCGGGACCAAT 59.000 50.000 6.32 0.00 37.23 3.16
2396 2412 0.255890 ATCCAGAACCGGGACCAATG 59.744 55.000 6.32 0.00 37.23 2.82
2397 2413 1.378514 CCAGAACCGGGACCAATGG 60.379 63.158 6.32 0.00 0.00 3.16
2398 2414 1.682849 CAGAACCGGGACCAATGGA 59.317 57.895 6.16 0.00 0.00 3.41
2399 2415 0.392998 CAGAACCGGGACCAATGGAG 60.393 60.000 6.16 0.00 0.00 3.86
2400 2416 1.749258 GAACCGGGACCAATGGAGC 60.749 63.158 6.16 0.00 0.00 4.70
2401 2417 2.198304 GAACCGGGACCAATGGAGCT 62.198 60.000 6.16 0.00 0.00 4.09
2402 2418 0.912487 AACCGGGACCAATGGAGCTA 60.912 55.000 6.16 0.00 0.00 3.32
2403 2419 0.694444 ACCGGGACCAATGGAGCTAT 60.694 55.000 6.16 0.00 0.00 2.97
2404 2420 0.474184 CCGGGACCAATGGAGCTATT 59.526 55.000 6.16 0.00 0.00 1.73
2405 2421 1.133792 CCGGGACCAATGGAGCTATTT 60.134 52.381 6.16 0.00 0.00 1.40
2406 2422 1.949525 CGGGACCAATGGAGCTATTTG 59.050 52.381 6.16 0.00 0.00 2.32
2407 2423 1.683385 GGGACCAATGGAGCTATTTGC 59.317 52.381 6.16 0.00 43.29 3.68
2408 2424 1.683385 GGACCAATGGAGCTATTTGCC 59.317 52.381 6.16 0.00 44.23 4.52
2409 2425 1.683385 GACCAATGGAGCTATTTGCCC 59.317 52.381 6.16 0.00 44.23 5.36
2410 2426 1.043022 CCAATGGAGCTATTTGCCCC 58.957 55.000 0.00 0.00 44.23 5.80
2411 2427 0.670162 CAATGGAGCTATTTGCCCCG 59.330 55.000 0.00 0.00 43.15 5.73
2412 2428 0.468029 AATGGAGCTATTTGCCCCGG 60.468 55.000 0.00 0.00 43.15 5.73
2413 2429 1.645402 ATGGAGCTATTTGCCCCGGT 61.645 55.000 0.00 0.00 43.15 5.28
2414 2430 1.076995 GGAGCTATTTGCCCCGGTT 60.077 57.895 0.00 0.00 44.23 4.44
2415 2431 1.101635 GGAGCTATTTGCCCCGGTTC 61.102 60.000 0.00 0.00 44.23 3.62
2416 2432 1.436983 GAGCTATTTGCCCCGGTTCG 61.437 60.000 0.00 0.00 44.23 3.95
2417 2433 1.747745 GCTATTTGCCCCGGTTCGT 60.748 57.895 0.00 0.00 35.15 3.85
2418 2434 1.988834 GCTATTTGCCCCGGTTCGTG 61.989 60.000 0.00 0.00 35.15 4.35
2419 2435 0.391927 CTATTTGCCCCGGTTCGTGA 60.392 55.000 0.00 0.00 0.00 4.35
2420 2436 0.391927 TATTTGCCCCGGTTCGTGAG 60.392 55.000 0.00 0.00 0.00 3.51
2425 2441 4.760047 CCCGGTTCGTGAGCCCAG 62.760 72.222 0.00 0.00 0.00 4.45
2426 2442 4.760047 CCGGTTCGTGAGCCCAGG 62.760 72.222 0.00 0.00 0.00 4.45
2427 2443 4.760047 CGGTTCGTGAGCCCAGGG 62.760 72.222 0.00 0.00 0.00 4.45
2428 2444 4.410400 GGTTCGTGAGCCCAGGGG 62.410 72.222 7.91 3.48 38.57 4.79
2456 2472 3.061848 CCACGTGGGCCATTGGTC 61.062 66.667 27.57 0.54 0.00 4.02
2462 2478 4.376170 GGGCCATTGGTCCCGGTT 62.376 66.667 15.98 0.00 42.67 4.44
2463 2479 2.754254 GGCCATTGGTCCCGGTTC 60.754 66.667 0.00 0.00 0.00 3.62
2464 2480 3.131478 GCCATTGGTCCCGGTTCG 61.131 66.667 0.00 0.00 0.00 3.95
2465 2481 2.349755 CCATTGGTCCCGGTTCGT 59.650 61.111 0.00 0.00 0.00 3.85
2466 2482 1.743995 CCATTGGTCCCGGTTCGTC 60.744 63.158 0.00 0.00 0.00 4.20
2467 2483 1.743995 CATTGGTCCCGGTTCGTCC 60.744 63.158 0.00 0.00 0.00 4.79
2476 2492 4.785767 GGTTCGTCCGGACCTTTT 57.214 55.556 28.52 0.00 0.00 2.27
2477 2493 2.241171 GGTTCGTCCGGACCTTTTG 58.759 57.895 28.52 14.29 0.00 2.44
2488 2504 3.771978 CCTTTTGGTCCCGGTTGG 58.228 61.111 0.00 0.00 34.07 3.77
2489 2505 1.152631 CCTTTTGGTCCCGGTTGGT 60.153 57.895 0.00 0.00 34.77 3.67
2490 2506 1.460273 CCTTTTGGTCCCGGTTGGTG 61.460 60.000 0.00 0.00 34.77 4.17
2491 2507 1.455959 TTTTGGTCCCGGTTGGTGG 60.456 57.895 0.00 0.00 34.77 4.61
2498 2514 2.667199 CCGGTTGGTGGGACGAAC 60.667 66.667 0.00 0.00 36.30 3.95
2500 2516 2.667199 GGTTGGTGGGACGAACCG 60.667 66.667 5.08 0.00 44.79 4.44
2501 2517 2.667199 GTTGGTGGGACGAACCGG 60.667 66.667 0.00 0.00 40.86 5.28
2502 2518 3.943691 TTGGTGGGACGAACCGGG 61.944 66.667 6.32 0.00 40.86 5.73
2503 2519 4.938074 TGGTGGGACGAACCGGGA 62.938 66.667 6.32 0.00 40.86 5.14
2504 2520 4.383861 GGTGGGACGAACCGGGAC 62.384 72.222 6.32 0.00 40.11 4.46
2505 2521 4.383861 GTGGGACGAACCGGGACC 62.384 72.222 6.32 0.00 40.11 4.46
2506 2522 4.938074 TGGGACGAACCGGGACCA 62.938 66.667 6.32 1.29 40.11 4.02
2507 2523 3.628982 GGGACGAACCGGGACCAA 61.629 66.667 6.32 0.00 40.11 3.67
2508 2524 2.666812 GGACGAACCGGGACCAAT 59.333 61.111 6.32 0.00 0.00 3.16
2509 2525 1.743995 GGACGAACCGGGACCAATG 60.744 63.158 6.32 0.00 0.00 2.82
2510 2526 1.743995 GACGAACCGGGACCAATGG 60.744 63.158 6.32 0.00 0.00 3.16
2511 2527 2.349755 CGAACCGGGACCAATGGT 59.650 61.111 3.74 3.74 39.44 3.55
2519 2535 4.645809 GACCAATGGTCCTGGCTC 57.354 61.111 21.30 0.00 46.19 4.70
2520 2536 1.077429 GACCAATGGTCCTGGCTCC 60.077 63.158 21.30 0.00 46.19 4.70
2521 2537 1.542375 ACCAATGGTCCTGGCTCCT 60.542 57.895 0.00 0.00 37.48 3.69
2522 2538 1.077212 CCAATGGTCCTGGCTCCTG 60.077 63.158 8.68 1.45 0.00 3.86
2523 2539 1.077212 CAATGGTCCTGGCTCCTGG 60.077 63.158 5.56 5.56 36.53 4.45
2524 2540 2.988839 AATGGTCCTGGCTCCTGGC 61.989 63.158 6.94 3.14 40.90 4.85
2533 2549 3.647367 GCTCCTGGCCCATCACTA 58.353 61.111 0.00 0.00 34.27 2.74
2534 2550 2.149530 GCTCCTGGCCCATCACTAT 58.850 57.895 0.00 0.00 34.27 2.12
2535 2551 0.475906 GCTCCTGGCCCATCACTATT 59.524 55.000 0.00 0.00 34.27 1.73
2536 2552 1.816961 GCTCCTGGCCCATCACTATTG 60.817 57.143 0.00 0.00 34.27 1.90
2537 2553 0.846015 TCCTGGCCCATCACTATTGG 59.154 55.000 0.00 0.00 0.00 3.16
2538 2554 0.552848 CCTGGCCCATCACTATTGGT 59.447 55.000 0.00 0.00 31.99 3.67
2539 2555 1.477558 CCTGGCCCATCACTATTGGTC 60.478 57.143 0.00 0.00 31.99 4.02
2540 2556 0.550914 TGGCCCATCACTATTGGTCC 59.449 55.000 0.00 0.00 31.99 4.46
2541 2557 0.178990 GGCCCATCACTATTGGTCCC 60.179 60.000 0.00 0.00 31.99 4.46
2542 2558 0.535102 GCCCATCACTATTGGTCCCG 60.535 60.000 0.00 0.00 31.99 5.14
2543 2559 0.108585 CCCATCACTATTGGTCCCGG 59.891 60.000 0.00 0.00 31.99 5.73
2544 2560 0.837272 CCATCACTATTGGTCCCGGT 59.163 55.000 0.00 0.00 0.00 5.28
2545 2561 1.211949 CCATCACTATTGGTCCCGGTT 59.788 52.381 0.00 0.00 0.00 4.44
2546 2562 2.288666 CATCACTATTGGTCCCGGTTG 58.711 52.381 0.00 0.00 0.00 3.77
2547 2563 0.616371 TCACTATTGGTCCCGGTTGG 59.384 55.000 0.00 0.00 0.00 3.77
2548 2564 0.326927 CACTATTGGTCCCGGTTGGT 59.673 55.000 0.00 0.00 34.77 3.67
2549 2565 0.326927 ACTATTGGTCCCGGTTGGTG 59.673 55.000 0.00 0.00 34.77 4.17
2550 2566 0.393808 CTATTGGTCCCGGTTGGTGG 60.394 60.000 0.00 0.00 34.77 4.61
2551 2567 2.487274 TATTGGTCCCGGTTGGTGGC 62.487 60.000 0.00 0.00 34.77 5.01
2553 2569 4.360405 GGTCCCGGTTGGTGGCAT 62.360 66.667 0.00 0.00 34.77 4.40
2554 2570 3.061848 GTCCCGGTTGGTGGCATG 61.062 66.667 0.00 0.00 34.77 4.06
2555 2571 3.253061 TCCCGGTTGGTGGCATGA 61.253 61.111 0.00 0.00 34.77 3.07
2556 2572 2.282816 CCCGGTTGGTGGCATGAA 60.283 61.111 0.00 0.00 0.00 2.57
2557 2573 2.635443 CCCGGTTGGTGGCATGAAC 61.635 63.158 0.00 0.00 0.00 3.18
2558 2574 1.900981 CCGGTTGGTGGCATGAACA 60.901 57.895 12.06 0.00 0.00 3.18
2559 2575 1.250154 CCGGTTGGTGGCATGAACAT 61.250 55.000 12.06 0.00 0.00 2.71
2560 2576 0.109179 CGGTTGGTGGCATGAACATG 60.109 55.000 10.04 10.04 41.60 3.21
2561 2577 1.255882 GGTTGGTGGCATGAACATGA 58.744 50.000 17.40 0.00 41.20 3.07
2562 2578 1.617850 GGTTGGTGGCATGAACATGAA 59.382 47.619 17.40 3.29 41.20 2.57
2563 2579 2.610232 GGTTGGTGGCATGAACATGAAC 60.610 50.000 17.40 13.44 41.20 3.18
2564 2580 1.255882 TGGTGGCATGAACATGAACC 58.744 50.000 21.99 21.99 42.57 3.62
2565 2581 0.171007 GGTGGCATGAACATGAACCG 59.829 55.000 17.40 0.00 41.20 4.44
2566 2582 0.171007 GTGGCATGAACATGAACCGG 59.829 55.000 17.40 0.00 41.20 5.28
2567 2583 0.964860 TGGCATGAACATGAACCGGG 60.965 55.000 17.40 0.00 41.20 5.73
2568 2584 0.679640 GGCATGAACATGAACCGGGA 60.680 55.000 17.40 0.00 41.20 5.14
2569 2585 0.451783 GCATGAACATGAACCGGGAC 59.548 55.000 17.40 0.00 41.20 4.46
2570 2586 1.094785 CATGAACATGAACCGGGACC 58.905 55.000 6.32 0.00 41.20 4.46
2571 2587 0.695924 ATGAACATGAACCGGGACCA 59.304 50.000 6.32 0.00 0.00 4.02
2572 2588 0.474614 TGAACATGAACCGGGACCAA 59.525 50.000 6.32 0.00 0.00 3.67
2573 2589 1.133761 TGAACATGAACCGGGACCAAA 60.134 47.619 6.32 0.00 0.00 3.28
2574 2590 1.957877 GAACATGAACCGGGACCAAAA 59.042 47.619 6.32 0.00 0.00 2.44
2575 2591 1.616159 ACATGAACCGGGACCAAAAG 58.384 50.000 6.32 0.00 0.00 2.27
2576 2592 0.887933 CATGAACCGGGACCAAAAGG 59.112 55.000 6.32 0.00 0.00 3.11
2577 2593 0.251608 ATGAACCGGGACCAAAAGGG 60.252 55.000 6.32 0.00 44.81 3.95
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.763897 GTGTTACTGGATGCTTCCCAATT 59.236 43.478 15.62 0.72 41.83 2.32
1 2 3.245229 TGTGTTACTGGATGCTTCCCAAT 60.245 43.478 15.62 4.23 41.83 3.16
2 3 2.107378 TGTGTTACTGGATGCTTCCCAA 59.893 45.455 15.62 5.01 41.83 4.12
3 4 1.702401 TGTGTTACTGGATGCTTCCCA 59.298 47.619 15.62 3.58 41.83 4.37
4 5 2.084546 GTGTGTTACTGGATGCTTCCC 58.915 52.381 15.62 0.98 41.83 3.97
5 6 3.059352 AGTGTGTTACTGGATGCTTCC 57.941 47.619 11.69 11.69 42.94 3.46
26 27 3.704566 GGGGGTGTTTTTGGATATCTTCC 59.295 47.826 2.05 0.00 45.69 3.46
27 28 4.349365 TGGGGGTGTTTTTGGATATCTTC 58.651 43.478 2.05 0.00 0.00 2.87
28 29 4.412060 TGGGGGTGTTTTTGGATATCTT 57.588 40.909 2.05 0.00 0.00 2.40
29 30 4.412060 TTGGGGGTGTTTTTGGATATCT 57.588 40.909 2.05 0.00 0.00 1.98
30 31 5.396324 GGATTTGGGGGTGTTTTTGGATATC 60.396 44.000 0.00 0.00 0.00 1.63
31 32 4.473196 GGATTTGGGGGTGTTTTTGGATAT 59.527 41.667 0.00 0.00 0.00 1.63
32 33 3.841255 GGATTTGGGGGTGTTTTTGGATA 59.159 43.478 0.00 0.00 0.00 2.59
33 34 2.642311 GGATTTGGGGGTGTTTTTGGAT 59.358 45.455 0.00 0.00 0.00 3.41
34 35 2.050918 GGATTTGGGGGTGTTTTTGGA 58.949 47.619 0.00 0.00 0.00 3.53
35 36 1.073125 GGGATTTGGGGGTGTTTTTGG 59.927 52.381 0.00 0.00 0.00 3.28
36 37 1.073125 GGGGATTTGGGGGTGTTTTTG 59.927 52.381 0.00 0.00 0.00 2.44
37 38 1.345526 TGGGGATTTGGGGGTGTTTTT 60.346 47.619 0.00 0.00 0.00 1.94
38 39 0.269173 TGGGGATTTGGGGGTGTTTT 59.731 50.000 0.00 0.00 0.00 2.43
39 40 0.472925 GTGGGGATTTGGGGGTGTTT 60.473 55.000 0.00 0.00 0.00 2.83
40 41 1.157513 GTGGGGATTTGGGGGTGTT 59.842 57.895 0.00 0.00 0.00 3.32
41 42 1.782608 AGTGGGGATTTGGGGGTGT 60.783 57.895 0.00 0.00 0.00 4.16
42 43 1.000359 GAGTGGGGATTTGGGGGTG 60.000 63.158 0.00 0.00 0.00 4.61
43 44 1.151361 AGAGTGGGGATTTGGGGGT 60.151 57.895 0.00 0.00 0.00 4.95
44 45 1.615262 GAGAGTGGGGATTTGGGGG 59.385 63.158 0.00 0.00 0.00 5.40
45 46 1.214305 TGGAGAGTGGGGATTTGGGG 61.214 60.000 0.00 0.00 0.00 4.96
46 47 0.929244 ATGGAGAGTGGGGATTTGGG 59.071 55.000 0.00 0.00 0.00 4.12
47 48 4.459852 AATATGGAGAGTGGGGATTTGG 57.540 45.455 0.00 0.00 0.00 3.28
48 49 7.458409 CATAAATATGGAGAGTGGGGATTTG 57.542 40.000 0.00 0.00 0.00 2.32
62 63 9.166850 AGAGTGCTCTGATCCCCATAAATATGG 62.167 44.444 11.76 11.76 44.29 2.74
63 64 5.813383 AGTGCTCTGATCCCCATAAATATG 58.187 41.667 0.00 0.00 0.00 1.78
64 65 5.789575 AGAGTGCTCTGATCCCCATAAATAT 59.210 40.000 0.28 0.00 38.75 1.28
65 66 5.158141 AGAGTGCTCTGATCCCCATAAATA 58.842 41.667 0.28 0.00 38.75 1.40
66 67 3.979347 AGAGTGCTCTGATCCCCATAAAT 59.021 43.478 0.28 0.00 38.75 1.40
67 68 3.387962 AGAGTGCTCTGATCCCCATAAA 58.612 45.455 0.28 0.00 38.75 1.40
68 69 3.051940 AGAGTGCTCTGATCCCCATAA 57.948 47.619 0.28 0.00 38.75 1.90
69 70 2.783379 AGAGTGCTCTGATCCCCATA 57.217 50.000 0.28 0.00 38.75 2.74
70 71 1.890552 AAGAGTGCTCTGATCCCCAT 58.109 50.000 2.11 0.00 40.36 4.00
71 72 2.550277 TAAGAGTGCTCTGATCCCCA 57.450 50.000 2.11 0.00 40.36 4.96
72 73 2.968574 TGATAAGAGTGCTCTGATCCCC 59.031 50.000 18.96 1.88 43.84 4.81
73 74 4.888326 ATGATAAGAGTGCTCTGATCCC 57.112 45.455 18.96 2.45 43.84 3.85
74 75 6.588719 ACTATGATAAGAGTGCTCTGATCC 57.411 41.667 18.96 6.59 43.84 3.36
77 78 9.973450 GAATTAACTATGATAAGAGTGCTCTGA 57.027 33.333 2.11 0.00 40.36 3.27
78 79 9.979578 AGAATTAACTATGATAAGAGTGCTCTG 57.020 33.333 2.11 0.00 40.36 3.35
80 81 9.973450 TGAGAATTAACTATGATAAGAGTGCTC 57.027 33.333 0.00 0.00 0.00 4.26
99 100 9.550406 TTTGAGCAAATTTCTTGAATGAGAATT 57.450 25.926 0.00 0.00 35.70 2.17
100 101 9.204570 CTTTGAGCAAATTTCTTGAATGAGAAT 57.795 29.630 0.00 0.00 35.70 2.40
101 102 7.170320 GCTTTGAGCAAATTTCTTGAATGAGAA 59.830 33.333 0.00 0.00 41.89 2.87
102 103 6.643770 GCTTTGAGCAAATTTCTTGAATGAGA 59.356 34.615 0.00 0.00 41.89 3.27
103 104 6.818416 GCTTTGAGCAAATTTCTTGAATGAG 58.182 36.000 0.00 0.00 41.89 2.90
104 105 6.774354 GCTTTGAGCAAATTTCTTGAATGA 57.226 33.333 0.00 0.00 41.89 2.57
119 120 4.053469 TGGGTTTTAACTTGCTTTGAGC 57.947 40.909 0.00 0.00 42.82 4.26
120 121 6.760770 TCAAATGGGTTTTAACTTGCTTTGAG 59.239 34.615 0.00 0.00 0.00 3.02
121 122 6.644347 TCAAATGGGTTTTAACTTGCTTTGA 58.356 32.000 0.00 0.00 0.00 2.69
122 123 6.760770 TCTCAAATGGGTTTTAACTTGCTTTG 59.239 34.615 0.00 0.00 0.00 2.77
123 124 6.883744 TCTCAAATGGGTTTTAACTTGCTTT 58.116 32.000 0.00 0.00 0.00 3.51
124 125 6.478512 TCTCAAATGGGTTTTAACTTGCTT 57.521 33.333 0.00 0.00 0.00 3.91
125 126 6.670695 ATCTCAAATGGGTTTTAACTTGCT 57.329 33.333 0.00 0.00 0.00 3.91
126 127 8.825667 TTAATCTCAAATGGGTTTTAACTTGC 57.174 30.769 0.00 0.00 0.00 4.01
127 128 9.423061 CCTTAATCTCAAATGGGTTTTAACTTG 57.577 33.333 0.00 0.00 0.00 3.16
128 129 8.593679 CCCTTAATCTCAAATGGGTTTTAACTT 58.406 33.333 0.00 0.00 0.00 2.66
129 130 7.310423 GCCCTTAATCTCAAATGGGTTTTAACT 60.310 37.037 0.00 0.00 37.09 2.24
130 131 6.816640 GCCCTTAATCTCAAATGGGTTTTAAC 59.183 38.462 0.00 0.00 37.09 2.01
131 132 6.498651 TGCCCTTAATCTCAAATGGGTTTTAA 59.501 34.615 0.00 0.00 37.09 1.52
132 133 6.019748 TGCCCTTAATCTCAAATGGGTTTTA 58.980 36.000 0.00 0.00 37.09 1.52
133 134 4.843516 TGCCCTTAATCTCAAATGGGTTTT 59.156 37.500 0.00 0.00 37.09 2.43
134 135 4.424842 TGCCCTTAATCTCAAATGGGTTT 58.575 39.130 0.00 0.00 37.09 3.27
135 136 4.059773 TGCCCTTAATCTCAAATGGGTT 57.940 40.909 0.00 0.00 37.09 4.11
136 137 3.756082 TGCCCTTAATCTCAAATGGGT 57.244 42.857 0.00 0.00 37.09 4.51
137 138 4.026052 AGTTGCCCTTAATCTCAAATGGG 58.974 43.478 0.00 0.00 37.76 4.00
138 139 4.952335 AGAGTTGCCCTTAATCTCAAATGG 59.048 41.667 0.00 0.00 0.00 3.16
139 140 6.825721 AGTAGAGTTGCCCTTAATCTCAAATG 59.174 38.462 0.00 0.00 0.00 2.32
140 141 6.963322 AGTAGAGTTGCCCTTAATCTCAAAT 58.037 36.000 0.00 0.00 0.00 2.32
141 142 6.374417 AGTAGAGTTGCCCTTAATCTCAAA 57.626 37.500 0.00 0.00 0.00 2.69
142 143 7.344612 TGATAGTAGAGTTGCCCTTAATCTCAA 59.655 37.037 0.00 0.00 0.00 3.02
143 144 6.839134 TGATAGTAGAGTTGCCCTTAATCTCA 59.161 38.462 0.00 0.00 0.00 3.27
144 145 7.291411 TGATAGTAGAGTTGCCCTTAATCTC 57.709 40.000 0.00 0.00 0.00 2.75
145 146 7.863901 ATGATAGTAGAGTTGCCCTTAATCT 57.136 36.000 0.00 0.00 0.00 2.40
146 147 8.910351 AAATGATAGTAGAGTTGCCCTTAATC 57.090 34.615 0.00 0.00 0.00 1.75
147 148 9.700831 AAAAATGATAGTAGAGTTGCCCTTAAT 57.299 29.630 0.00 0.00 0.00 1.40
148 149 9.174166 GAAAAATGATAGTAGAGTTGCCCTTAA 57.826 33.333 0.00 0.00 0.00 1.85
149 150 8.325787 TGAAAAATGATAGTAGAGTTGCCCTTA 58.674 33.333 0.00 0.00 0.00 2.69
150 151 7.175104 TGAAAAATGATAGTAGAGTTGCCCTT 58.825 34.615 0.00 0.00 0.00 3.95
151 152 6.721318 TGAAAAATGATAGTAGAGTTGCCCT 58.279 36.000 0.00 0.00 0.00 5.19
152 153 6.038714 CCTGAAAAATGATAGTAGAGTTGCCC 59.961 42.308 0.00 0.00 0.00 5.36
153 154 6.823689 TCCTGAAAAATGATAGTAGAGTTGCC 59.176 38.462 0.00 0.00 0.00 4.52
154 155 7.849804 TCCTGAAAAATGATAGTAGAGTTGC 57.150 36.000 0.00 0.00 0.00 4.17
162 163 9.136323 ACACTTCTTTTCCTGAAAAATGATAGT 57.864 29.630 6.53 5.60 39.49 2.12
166 167 9.130661 TGATACACTTCTTTTCCTGAAAAATGA 57.869 29.630 6.53 0.00 39.49 2.57
167 168 9.918630 ATGATACACTTCTTTTCCTGAAAAATG 57.081 29.630 6.53 5.64 39.49 2.32
169 170 9.354673 AGATGATACACTTCTTTTCCTGAAAAA 57.645 29.630 6.53 0.00 39.49 1.94
170 171 8.786898 CAGATGATACACTTCTTTTCCTGAAAA 58.213 33.333 5.07 5.07 37.90 2.29
171 172 7.094634 GCAGATGATACACTTCTTTTCCTGAAA 60.095 37.037 0.00 0.00 31.91 2.69
172 173 6.372659 GCAGATGATACACTTCTTTTCCTGAA 59.627 38.462 0.00 0.00 31.91 3.02
173 174 5.877012 GCAGATGATACACTTCTTTTCCTGA 59.123 40.000 0.00 0.00 31.91 3.86
174 175 5.645067 TGCAGATGATACACTTCTTTTCCTG 59.355 40.000 0.00 0.00 31.91 3.86
175 176 5.809001 TGCAGATGATACACTTCTTTTCCT 58.191 37.500 0.00 0.00 31.91 3.36
176 177 6.690194 ATGCAGATGATACACTTCTTTTCC 57.310 37.500 0.00 0.00 31.91 3.13
177 178 8.430801 AGTATGCAGATGATACACTTCTTTTC 57.569 34.615 0.00 0.00 31.91 2.29
178 179 9.319143 GTAGTATGCAGATGATACACTTCTTTT 57.681 33.333 0.00 0.00 31.91 2.27
179 180 8.478066 TGTAGTATGCAGATGATACACTTCTTT 58.522 33.333 0.00 0.00 31.91 2.52
180 181 8.011844 TGTAGTATGCAGATGATACACTTCTT 57.988 34.615 0.00 0.00 31.91 2.52
181 182 7.588497 TGTAGTATGCAGATGATACACTTCT 57.412 36.000 0.00 0.00 34.06 2.85
195 196 4.142160 GGAGTGATGTGTCTGTAGTATGCA 60.142 45.833 0.00 0.00 0.00 3.96
196 197 4.098654 AGGAGTGATGTGTCTGTAGTATGC 59.901 45.833 0.00 0.00 0.00 3.14
197 198 5.221145 GGAGGAGTGATGTGTCTGTAGTATG 60.221 48.000 0.00 0.00 0.00 2.39
198 199 4.890581 GGAGGAGTGATGTGTCTGTAGTAT 59.109 45.833 0.00 0.00 0.00 2.12
199 200 4.018324 AGGAGGAGTGATGTGTCTGTAGTA 60.018 45.833 0.00 0.00 0.00 1.82
200 201 3.093057 GGAGGAGTGATGTGTCTGTAGT 58.907 50.000 0.00 0.00 0.00 2.73
201 202 3.360867 AGGAGGAGTGATGTGTCTGTAG 58.639 50.000 0.00 0.00 0.00 2.74
202 203 3.010696 AGAGGAGGAGTGATGTGTCTGTA 59.989 47.826 0.00 0.00 0.00 2.74
203 204 2.175202 GAGGAGGAGTGATGTGTCTGT 58.825 52.381 0.00 0.00 0.00 3.41
204 205 2.455557 AGAGGAGGAGTGATGTGTCTG 58.544 52.381 0.00 0.00 0.00 3.51
205 206 2.917713 AGAGGAGGAGTGATGTGTCT 57.082 50.000 0.00 0.00 0.00 3.41
206 207 4.020543 AGTTAGAGGAGGAGTGATGTGTC 58.979 47.826 0.00 0.00 0.00 3.67
207 208 4.054359 AGTTAGAGGAGGAGTGATGTGT 57.946 45.455 0.00 0.00 0.00 3.72
208 209 6.723298 ATTAGTTAGAGGAGGAGTGATGTG 57.277 41.667 0.00 0.00 0.00 3.21
209 210 6.325286 GGAATTAGTTAGAGGAGGAGTGATGT 59.675 42.308 0.00 0.00 0.00 3.06
210 211 6.515862 CGGAATTAGTTAGAGGAGGAGTGATG 60.516 46.154 0.00 0.00 0.00 3.07
211 212 5.536916 CGGAATTAGTTAGAGGAGGAGTGAT 59.463 44.000 0.00 0.00 0.00 3.06
212 213 4.888239 CGGAATTAGTTAGAGGAGGAGTGA 59.112 45.833 0.00 0.00 0.00 3.41
213 214 4.038162 CCGGAATTAGTTAGAGGAGGAGTG 59.962 50.000 0.00 0.00 0.00 3.51
214 215 4.216708 CCGGAATTAGTTAGAGGAGGAGT 58.783 47.826 0.00 0.00 0.00 3.85
215 216 3.574826 CCCGGAATTAGTTAGAGGAGGAG 59.425 52.174 0.73 0.00 0.00 3.69
216 217 3.573695 CCCGGAATTAGTTAGAGGAGGA 58.426 50.000 0.73 0.00 0.00 3.71
217 218 2.037381 GCCCGGAATTAGTTAGAGGAGG 59.963 54.545 0.73 0.00 0.00 4.30
218 219 2.698797 TGCCCGGAATTAGTTAGAGGAG 59.301 50.000 0.73 0.00 0.00 3.69
219 220 2.433239 GTGCCCGGAATTAGTTAGAGGA 59.567 50.000 0.73 0.00 0.00 3.71
220 221 2.169769 TGTGCCCGGAATTAGTTAGAGG 59.830 50.000 0.73 0.00 0.00 3.69
221 222 3.536956 TGTGCCCGGAATTAGTTAGAG 57.463 47.619 0.73 0.00 0.00 2.43
222 223 3.602483 GTTGTGCCCGGAATTAGTTAGA 58.398 45.455 0.73 0.00 0.00 2.10
223 224 2.681344 GGTTGTGCCCGGAATTAGTTAG 59.319 50.000 0.73 0.00 0.00 2.34
224 225 2.713877 GGTTGTGCCCGGAATTAGTTA 58.286 47.619 0.73 0.00 0.00 2.24
225 226 1.541379 GGTTGTGCCCGGAATTAGTT 58.459 50.000 0.73 0.00 0.00 2.24
226 227 3.259592 GGTTGTGCCCGGAATTAGT 57.740 52.632 0.73 0.00 0.00 2.24
236 237 1.534729 CTTGGTTAGAGGGTTGTGCC 58.465 55.000 0.00 0.00 0.00 5.01
237 238 0.881796 GCTTGGTTAGAGGGTTGTGC 59.118 55.000 0.00 0.00 0.00 4.57
238 239 1.202879 TGGCTTGGTTAGAGGGTTGTG 60.203 52.381 0.00 0.00 0.00 3.33
239 240 1.073923 CTGGCTTGGTTAGAGGGTTGT 59.926 52.381 0.00 0.00 0.00 3.32
240 241 1.826385 CTGGCTTGGTTAGAGGGTTG 58.174 55.000 0.00 0.00 0.00 3.77
241 242 0.038310 GCTGGCTTGGTTAGAGGGTT 59.962 55.000 0.00 0.00 0.00 4.11
242 243 1.685820 GCTGGCTTGGTTAGAGGGT 59.314 57.895 0.00 0.00 0.00 4.34
243 244 1.077429 GGCTGGCTTGGTTAGAGGG 60.077 63.158 0.00 0.00 0.00 4.30
244 245 1.077429 GGGCTGGCTTGGTTAGAGG 60.077 63.158 0.00 0.00 0.00 3.69
245 246 1.450312 CGGGCTGGCTTGGTTAGAG 60.450 63.158 0.00 0.00 0.00 2.43
246 247 1.899437 CTCGGGCTGGCTTGGTTAGA 61.899 60.000 0.00 0.00 0.00 2.10
247 248 1.450312 CTCGGGCTGGCTTGGTTAG 60.450 63.158 0.00 0.00 0.00 2.34
248 249 2.668632 CTCGGGCTGGCTTGGTTA 59.331 61.111 0.00 0.00 0.00 2.85
252 253 4.711949 AGTGCTCGGGCTGGCTTG 62.712 66.667 9.62 0.00 39.59 4.01
253 254 3.497884 AAAGTGCTCGGGCTGGCTT 62.498 57.895 9.62 7.69 39.59 4.35
254 255 3.909086 GAAAGTGCTCGGGCTGGCT 62.909 63.158 9.62 0.56 39.59 4.75
255 256 3.435186 GAAAGTGCTCGGGCTGGC 61.435 66.667 9.62 0.00 39.59 4.85
256 257 1.372087 GATGAAAGTGCTCGGGCTGG 61.372 60.000 9.62 0.00 39.59 4.85
257 258 0.392193 AGATGAAAGTGCTCGGGCTG 60.392 55.000 9.62 0.00 39.59 4.85
258 259 1.195115 TAGATGAAAGTGCTCGGGCT 58.805 50.000 9.62 0.00 39.59 5.19
259 260 2.139118 GATAGATGAAAGTGCTCGGGC 58.861 52.381 0.00 0.00 39.26 6.13
260 261 3.459232 TGATAGATGAAAGTGCTCGGG 57.541 47.619 0.00 0.00 0.00 5.14
261 262 5.295950 AGAATGATAGATGAAAGTGCTCGG 58.704 41.667 0.00 0.00 0.00 4.63
262 263 6.089283 GCTAGAATGATAGATGAAAGTGCTCG 59.911 42.308 0.00 0.00 0.00 5.03
263 264 6.927936 TGCTAGAATGATAGATGAAAGTGCTC 59.072 38.462 0.00 0.00 0.00 4.26
264 265 6.824553 TGCTAGAATGATAGATGAAAGTGCT 58.175 36.000 0.00 0.00 0.00 4.40
265 266 7.488187 TTGCTAGAATGATAGATGAAAGTGC 57.512 36.000 0.00 0.00 0.00 4.40
266 267 9.932699 CTTTTGCTAGAATGATAGATGAAAGTG 57.067 33.333 0.00 0.00 0.00 3.16
267 268 9.678260 ACTTTTGCTAGAATGATAGATGAAAGT 57.322 29.630 0.00 0.00 32.26 2.66
268 269 9.932699 CACTTTTGCTAGAATGATAGATGAAAG 57.067 33.333 0.00 0.00 0.00 2.62
269 270 9.453572 ACACTTTTGCTAGAATGATAGATGAAA 57.546 29.630 0.00 0.00 0.00 2.69
270 271 9.102757 GACACTTTTGCTAGAATGATAGATGAA 57.897 33.333 0.00 0.00 0.00 2.57
271 272 8.481314 AGACACTTTTGCTAGAATGATAGATGA 58.519 33.333 0.00 0.00 0.00 2.92
272 273 8.659925 AGACACTTTTGCTAGAATGATAGATG 57.340 34.615 0.00 0.00 0.00 2.90
273 274 9.757227 GTAGACACTTTTGCTAGAATGATAGAT 57.243 33.333 0.00 0.00 0.00 1.98
274 275 8.198109 GGTAGACACTTTTGCTAGAATGATAGA 58.802 37.037 0.00 0.00 0.00 1.98
275 276 7.981789 TGGTAGACACTTTTGCTAGAATGATAG 59.018 37.037 0.00 0.00 0.00 2.08
276 277 7.764443 GTGGTAGACACTTTTGCTAGAATGATA 59.236 37.037 0.00 0.00 46.72 2.15
277 278 6.595716 GTGGTAGACACTTTTGCTAGAATGAT 59.404 38.462 0.00 0.00 46.72 2.45
278 279 5.932303 GTGGTAGACACTTTTGCTAGAATGA 59.068 40.000 0.00 0.00 46.72 2.57
279 280 6.170675 GTGGTAGACACTTTTGCTAGAATG 57.829 41.667 0.00 0.00 46.72 2.67
293 294 4.072131 GCTTTTCAATCTGGTGGTAGACA 58.928 43.478 0.00 0.00 0.00 3.41
294 295 4.072131 TGCTTTTCAATCTGGTGGTAGAC 58.928 43.478 0.00 0.00 0.00 2.59
295 296 4.326826 CTGCTTTTCAATCTGGTGGTAGA 58.673 43.478 0.00 0.00 0.00 2.59
296 297 3.441572 CCTGCTTTTCAATCTGGTGGTAG 59.558 47.826 0.00 0.00 0.00 3.18
297 298 3.181434 ACCTGCTTTTCAATCTGGTGGTA 60.181 43.478 0.00 0.00 32.03 3.25
298 299 2.242043 CCTGCTTTTCAATCTGGTGGT 58.758 47.619 0.00 0.00 0.00 4.16
299 300 2.029649 CACCTGCTTTTCAATCTGGTGG 60.030 50.000 8.91 0.00 42.46 4.61
300 301 2.029649 CCACCTGCTTTTCAATCTGGTG 60.030 50.000 9.58 9.58 44.39 4.17
301 302 2.242043 CCACCTGCTTTTCAATCTGGT 58.758 47.619 0.00 0.00 33.20 4.00
302 303 1.547372 CCCACCTGCTTTTCAATCTGG 59.453 52.381 0.00 0.00 0.00 3.86
303 304 1.067354 GCCCACCTGCTTTTCAATCTG 60.067 52.381 0.00 0.00 0.00 2.90
304 305 1.260544 GCCCACCTGCTTTTCAATCT 58.739 50.000 0.00 0.00 0.00 2.40
305 306 0.968405 TGCCCACCTGCTTTTCAATC 59.032 50.000 0.00 0.00 0.00 2.67
306 307 1.070601 GTTGCCCACCTGCTTTTCAAT 59.929 47.619 0.00 0.00 0.00 2.57
307 308 0.463620 GTTGCCCACCTGCTTTTCAA 59.536 50.000 0.00 0.00 0.00 2.69
308 309 0.685785 TGTTGCCCACCTGCTTTTCA 60.686 50.000 0.00 0.00 0.00 2.69
309 310 0.032540 CTGTTGCCCACCTGCTTTTC 59.967 55.000 0.00 0.00 0.00 2.29
310 311 1.402107 CCTGTTGCCCACCTGCTTTT 61.402 55.000 0.00 0.00 0.00 2.27
311 312 1.833934 CCTGTTGCCCACCTGCTTT 60.834 57.895 0.00 0.00 0.00 3.51
312 313 2.203538 CCTGTTGCCCACCTGCTT 60.204 61.111 0.00 0.00 0.00 3.91
313 314 4.982701 GCCTGTTGCCCACCTGCT 62.983 66.667 0.00 0.00 0.00 4.24
314 315 4.982701 AGCCTGTTGCCCACCTGC 62.983 66.667 0.00 0.00 42.71 4.85
315 316 2.674380 GAGCCTGTTGCCCACCTG 60.674 66.667 0.00 0.00 42.71 4.00
316 317 2.856000 AGAGCCTGTTGCCCACCT 60.856 61.111 0.00 0.00 42.71 4.00
317 318 2.360475 GAGAGCCTGTTGCCCACC 60.360 66.667 0.00 0.00 42.71 4.61
318 319 2.360475 GGAGAGCCTGTTGCCCAC 60.360 66.667 0.00 0.00 42.71 4.61
319 320 2.156098 AAGGAGAGCCTGTTGCCCA 61.156 57.895 0.00 0.00 46.28 5.36
320 321 1.676967 CAAGGAGAGCCTGTTGCCC 60.677 63.158 0.00 0.00 46.28 5.36
321 322 2.338785 GCAAGGAGAGCCTGTTGCC 61.339 63.158 0.00 0.00 46.28 4.52
322 323 1.584380 CTGCAAGGAGAGCCTGTTGC 61.584 60.000 0.00 0.00 46.28 4.17
323 324 0.035881 TCTGCAAGGAGAGCCTGTTG 59.964 55.000 0.00 0.00 46.28 3.33
324 325 0.036022 GTCTGCAAGGAGAGCCTGTT 59.964 55.000 0.00 0.00 46.28 3.16
325 326 1.123861 TGTCTGCAAGGAGAGCCTGT 61.124 55.000 0.00 0.00 46.28 4.00
326 327 0.673022 GTGTCTGCAAGGAGAGCCTG 60.673 60.000 0.00 0.00 46.28 4.85
328 329 0.035630 ATGTGTCTGCAAGGAGAGCC 60.036 55.000 0.00 0.00 0.00 4.70
329 330 1.338484 TGATGTGTCTGCAAGGAGAGC 60.338 52.381 0.00 0.00 0.00 4.09
330 331 2.740981 GTTGATGTGTCTGCAAGGAGAG 59.259 50.000 0.00 0.00 0.00 3.20
331 332 2.369860 AGTTGATGTGTCTGCAAGGAGA 59.630 45.455 0.00 0.00 0.00 3.71
332 333 2.775890 AGTTGATGTGTCTGCAAGGAG 58.224 47.619 0.00 0.00 0.00 3.69
333 334 2.936919 AGTTGATGTGTCTGCAAGGA 57.063 45.000 0.00 0.00 0.00 3.36
334 335 3.996150 AAAGTTGATGTGTCTGCAAGG 57.004 42.857 0.00 0.00 0.00 3.61
335 336 4.923893 TCAAAAGTTGATGTGTCTGCAAG 58.076 39.130 0.00 0.00 34.08 4.01
336 337 4.979943 TCAAAAGTTGATGTGTCTGCAA 57.020 36.364 0.00 0.00 34.08 4.08
372 373 1.531423 AGAGCATGTTCAACAGCTGG 58.469 50.000 19.93 0.36 34.43 4.85
382 383 2.433436 GGACCGGTTTTAGAGCATGTT 58.567 47.619 9.42 0.00 0.00 2.71
416 417 1.961793 TCTCGTGTGGTTTTCCCTTG 58.038 50.000 0.00 0.00 39.73 3.61
615 619 0.388134 TCTCTACCGTTGCGACTTGC 60.388 55.000 1.84 0.00 46.70 4.01
616 620 2.279582 ATCTCTACCGTTGCGACTTG 57.720 50.000 1.84 0.00 0.00 3.16
617 621 2.731341 CGAATCTCTACCGTTGCGACTT 60.731 50.000 1.84 0.00 0.00 3.01
618 622 1.202154 CGAATCTCTACCGTTGCGACT 60.202 52.381 1.84 0.00 0.00 4.18
619 623 1.189403 CGAATCTCTACCGTTGCGAC 58.811 55.000 0.00 0.00 0.00 5.19
778 786 4.021192 GCCTCTCTCTCTCTCCATTATTGG 60.021 50.000 0.00 0.00 45.15 3.16
779 787 4.021192 GGCCTCTCTCTCTCTCCATTATTG 60.021 50.000 0.00 0.00 0.00 1.90
780 788 4.159557 GGCCTCTCTCTCTCTCCATTATT 58.840 47.826 0.00 0.00 0.00 1.40
781 789 3.778265 GGCCTCTCTCTCTCTCCATTAT 58.222 50.000 0.00 0.00 0.00 1.28
782 790 2.488167 CGGCCTCTCTCTCTCTCCATTA 60.488 54.545 0.00 0.00 0.00 1.90
783 791 1.753847 CGGCCTCTCTCTCTCTCCATT 60.754 57.143 0.00 0.00 0.00 3.16
784 792 0.178992 CGGCCTCTCTCTCTCTCCAT 60.179 60.000 0.00 0.00 0.00 3.41
785 793 1.225983 CGGCCTCTCTCTCTCTCCA 59.774 63.158 0.00 0.00 0.00 3.86
786 794 1.528309 CCGGCCTCTCTCTCTCTCC 60.528 68.421 0.00 0.00 0.00 3.71
787 795 2.193536 GCCGGCCTCTCTCTCTCTC 61.194 68.421 18.11 0.00 0.00 3.20
788 796 2.123897 GCCGGCCTCTCTCTCTCT 60.124 66.667 18.11 0.00 0.00 3.10
789 797 3.223589 GGCCGGCCTCTCTCTCTC 61.224 72.222 38.76 7.31 0.00 3.20
843 851 0.743345 GAGGGTCGCGCTTAAATGGT 60.743 55.000 5.56 0.00 0.00 3.55
857 865 2.121832 TGGGTGGATGACGAGGGT 59.878 61.111 0.00 0.00 0.00 4.34
878 886 1.153147 GCGGGAGGGGAAGCTTAAG 60.153 63.158 0.00 0.00 0.00 1.85
949 957 2.592308 GGGTGGCCTTAGAGCAGG 59.408 66.667 3.32 0.00 36.95 4.85
951 959 4.096003 GCGGGTGGCCTTAGAGCA 62.096 66.667 3.32 0.00 34.80 4.26
1269 1277 2.749044 CACGGGAAGCAGCAGCAT 60.749 61.111 3.17 0.00 45.49 3.79
1284 1292 1.741770 GACCTCCACCATGACGCAC 60.742 63.158 0.00 0.00 0.00 5.34
1393 1401 1.518572 GCTCGTACATGTCCACCGG 60.519 63.158 0.00 0.00 0.00 5.28
1509 1517 1.080705 GAACCTCGACCACACCTCG 60.081 63.158 0.00 0.00 0.00 4.63
1628 1636 4.436183 GCAAGAATCAAGAAAGCCGTAGAC 60.436 45.833 0.00 0.00 0.00 2.59
1680 1692 2.389715 CTCCTCTACATCGGTTTCCCT 58.610 52.381 0.00 0.00 0.00 4.20
1780 1792 2.944349 GGACGTACACCCAACAAGAAAA 59.056 45.455 0.00 0.00 0.00 2.29
1790 1802 2.935481 CTTGTAGAGGACGTACACCC 57.065 55.000 0.00 0.00 30.01 4.61
1856 1868 6.127054 CCCCAATCACATCACTCGGTATATAT 60.127 42.308 0.00 0.00 0.00 0.86
1941 1953 5.050769 CGTAAATCTCTGTATGTGATGTGCC 60.051 44.000 0.00 0.00 0.00 5.01
2015 2027 8.239314 TCACAAAGACTCATCAAATGCTTTATC 58.761 33.333 0.00 0.00 0.00 1.75
2084 2097 6.372981 CCTTGCAAAAATAGCCAAACAATTC 58.627 36.000 0.00 0.00 0.00 2.17
2099 2112 3.888930 CTCTACCTTTCACCCTTGCAAAA 59.111 43.478 0.00 0.00 0.00 2.44
2121 2134 6.127814 GGACCAAAACCTAACCAAGTAATAGC 60.128 42.308 0.00 0.00 0.00 2.97
2126 2139 4.202493 GGAGGACCAAAACCTAACCAAGTA 60.202 45.833 0.00 0.00 37.93 2.24
2129 2142 2.787035 AGGAGGACCAAAACCTAACCAA 59.213 45.455 0.00 0.00 37.93 3.67
2312 2328 3.305813 CGTTTTCTACTAGTGGTGGCTGA 60.306 47.826 5.39 0.00 0.00 4.26
2313 2329 2.993899 CGTTTTCTACTAGTGGTGGCTG 59.006 50.000 5.39 0.00 0.00 4.85
2314 2330 2.028385 CCGTTTTCTACTAGTGGTGGCT 60.028 50.000 5.39 0.00 0.00 4.75
2315 2331 2.344025 CCGTTTTCTACTAGTGGTGGC 58.656 52.381 5.39 0.00 0.00 5.01
2316 2332 2.354403 CCCCGTTTTCTACTAGTGGTGG 60.354 54.545 5.39 1.96 0.00 4.61
2317 2333 2.933928 GCCCCGTTTTCTACTAGTGGTG 60.934 54.545 5.39 0.00 0.00 4.17
2318 2334 1.277273 GCCCCGTTTTCTACTAGTGGT 59.723 52.381 5.39 0.00 0.00 4.16
2319 2335 1.553704 AGCCCCGTTTTCTACTAGTGG 59.446 52.381 5.39 1.87 0.00 4.00
2320 2336 3.329929 AAGCCCCGTTTTCTACTAGTG 57.670 47.619 5.39 0.00 0.00 2.74
2321 2337 3.615834 CGAAAGCCCCGTTTTCTACTAGT 60.616 47.826 0.00 0.00 32.09 2.57
2322 2338 2.928116 CGAAAGCCCCGTTTTCTACTAG 59.072 50.000 0.00 0.00 32.09 2.57
2323 2339 2.299867 ACGAAAGCCCCGTTTTCTACTA 59.700 45.455 0.00 0.00 36.83 1.82
2324 2340 1.071228 ACGAAAGCCCCGTTTTCTACT 59.929 47.619 0.00 0.00 36.83 2.57
2325 2341 1.462283 GACGAAAGCCCCGTTTTCTAC 59.538 52.381 0.00 0.00 40.67 2.59
2326 2342 1.608801 GGACGAAAGCCCCGTTTTCTA 60.609 52.381 0.00 0.00 40.67 2.10
2327 2343 0.887836 GGACGAAAGCCCCGTTTTCT 60.888 55.000 0.00 0.00 40.67 2.52
2328 2344 1.167781 TGGACGAAAGCCCCGTTTTC 61.168 55.000 0.00 0.00 40.67 2.29
2329 2345 1.152922 TGGACGAAAGCCCCGTTTT 60.153 52.632 0.00 0.00 40.67 2.43
2330 2346 1.599797 CTGGACGAAAGCCCCGTTT 60.600 57.895 0.00 0.00 40.67 3.60
2331 2347 2.032071 CTGGACGAAAGCCCCGTT 59.968 61.111 0.00 0.00 40.67 4.44
2332 2348 4.016706 CCTGGACGAAAGCCCCGT 62.017 66.667 0.00 0.00 43.56 5.28
2335 2351 4.344865 TGGCCTGGACGAAAGCCC 62.345 66.667 3.32 0.00 45.14 5.19
2336 2352 2.747855 CTGGCCTGGACGAAAGCC 60.748 66.667 3.32 0.00 45.96 4.35
2337 2353 1.172812 AAACTGGCCTGGACGAAAGC 61.173 55.000 14.82 0.00 0.00 3.51
2338 2354 2.076863 CTAAACTGGCCTGGACGAAAG 58.923 52.381 14.82 0.00 0.00 2.62
2339 2355 1.880646 GCTAAACTGGCCTGGACGAAA 60.881 52.381 14.82 0.00 0.00 3.46
2340 2356 0.321298 GCTAAACTGGCCTGGACGAA 60.321 55.000 14.82 0.00 0.00 3.85
2341 2357 1.295423 GCTAAACTGGCCTGGACGA 59.705 57.895 14.82 0.00 0.00 4.20
2342 2358 1.745489 GGCTAAACTGGCCTGGACG 60.745 63.158 14.82 0.00 45.57 4.79
2343 2359 4.320910 GGCTAAACTGGCCTGGAC 57.679 61.111 14.82 0.00 45.57 4.02
2349 2365 2.298610 GGACTAATGGGCTAAACTGGC 58.701 52.381 0.00 0.00 0.00 4.85
2350 2366 2.745152 CGGGACTAATGGGCTAAACTGG 60.745 54.545 0.00 0.00 0.00 4.00
2351 2367 2.561569 CGGGACTAATGGGCTAAACTG 58.438 52.381 0.00 0.00 0.00 3.16
2352 2368 1.489230 CCGGGACTAATGGGCTAAACT 59.511 52.381 0.00 0.00 0.00 2.66
2353 2369 1.211212 ACCGGGACTAATGGGCTAAAC 59.789 52.381 6.32 0.00 0.00 2.01
2354 2370 1.587066 ACCGGGACTAATGGGCTAAA 58.413 50.000 6.32 0.00 0.00 1.85
2355 2371 1.487558 GAACCGGGACTAATGGGCTAA 59.512 52.381 6.32 0.00 0.00 3.09
2356 2372 1.125633 GAACCGGGACTAATGGGCTA 58.874 55.000 6.32 0.00 0.00 3.93
2357 2373 0.912487 TGAACCGGGACTAATGGGCT 60.912 55.000 6.32 0.00 0.00 5.19
2358 2374 0.034863 TTGAACCGGGACTAATGGGC 60.035 55.000 6.32 0.00 0.00 5.36
2359 2375 2.572290 GATTGAACCGGGACTAATGGG 58.428 52.381 6.32 0.00 0.00 4.00
2360 2376 2.092646 TGGATTGAACCGGGACTAATGG 60.093 50.000 6.32 0.00 0.00 3.16
2361 2377 3.118408 TCTGGATTGAACCGGGACTAATG 60.118 47.826 6.32 0.00 36.97 1.90
2362 2378 3.112263 TCTGGATTGAACCGGGACTAAT 58.888 45.455 6.32 0.27 36.97 1.73
2363 2379 2.542550 TCTGGATTGAACCGGGACTAA 58.457 47.619 6.32 0.00 36.97 2.24
2364 2380 2.235402 GTTCTGGATTGAACCGGGACTA 59.765 50.000 6.32 0.00 40.62 2.59
2365 2381 1.003233 GTTCTGGATTGAACCGGGACT 59.997 52.381 6.32 0.00 40.62 3.85
2366 2382 1.450025 GTTCTGGATTGAACCGGGAC 58.550 55.000 6.32 0.00 40.10 4.46
2367 2383 3.948735 GTTCTGGATTGAACCGGGA 57.051 52.632 6.32 0.00 40.10 5.14
2372 2388 1.450025 GTCCCGGTTCTGGATTGAAC 58.550 55.000 0.00 0.00 43.88 3.18
2373 2389 0.326927 GGTCCCGGTTCTGGATTGAA 59.673 55.000 0.00 0.00 33.65 2.69
2374 2390 0.838554 TGGTCCCGGTTCTGGATTGA 60.839 55.000 0.00 0.00 33.65 2.57
2375 2391 0.037590 TTGGTCCCGGTTCTGGATTG 59.962 55.000 0.00 0.00 33.65 2.67
2376 2392 0.999712 ATTGGTCCCGGTTCTGGATT 59.000 50.000 0.00 0.00 33.65 3.01
2377 2393 0.255890 CATTGGTCCCGGTTCTGGAT 59.744 55.000 0.00 0.00 33.65 3.41
2378 2394 1.682849 CATTGGTCCCGGTTCTGGA 59.317 57.895 0.00 0.00 0.00 3.86
2379 2395 1.378514 CCATTGGTCCCGGTTCTGG 60.379 63.158 0.00 0.00 0.00 3.86
2380 2396 0.392998 CTCCATTGGTCCCGGTTCTG 60.393 60.000 0.00 0.00 0.00 3.02
2381 2397 1.991230 CTCCATTGGTCCCGGTTCT 59.009 57.895 0.00 0.00 0.00 3.01
2382 2398 1.749258 GCTCCATTGGTCCCGGTTC 60.749 63.158 0.00 0.00 0.00 3.62
2383 2399 0.912487 TAGCTCCATTGGTCCCGGTT 60.912 55.000 0.00 0.00 0.00 4.44
2384 2400 0.694444 ATAGCTCCATTGGTCCCGGT 60.694 55.000 0.00 0.00 0.00 5.28
2385 2401 0.474184 AATAGCTCCATTGGTCCCGG 59.526 55.000 1.86 0.00 0.00 5.73
2386 2402 1.949525 CAAATAGCTCCATTGGTCCCG 59.050 52.381 1.86 0.00 0.00 5.14
2387 2403 1.683385 GCAAATAGCTCCATTGGTCCC 59.317 52.381 1.86 0.00 41.15 4.46
2388 2404 1.683385 GGCAAATAGCTCCATTGGTCC 59.317 52.381 1.86 0.00 44.79 4.46
2389 2405 1.683385 GGGCAAATAGCTCCATTGGTC 59.317 52.381 1.86 0.00 44.79 4.02
2390 2406 1.780503 GGGCAAATAGCTCCATTGGT 58.219 50.000 1.86 0.00 44.79 3.67
2397 2413 1.436983 CGAACCGGGGCAAATAGCTC 61.437 60.000 6.32 0.00 45.58 4.09
2398 2414 1.451387 CGAACCGGGGCAAATAGCT 60.451 57.895 6.32 0.00 44.79 3.32
2399 2415 1.747745 ACGAACCGGGGCAAATAGC 60.748 57.895 6.32 0.00 44.65 2.97
2400 2416 0.391927 TCACGAACCGGGGCAAATAG 60.392 55.000 6.32 0.00 0.00 1.73
2401 2417 0.391927 CTCACGAACCGGGGCAAATA 60.392 55.000 6.32 0.00 0.00 1.40
2402 2418 1.674322 CTCACGAACCGGGGCAAAT 60.674 57.895 6.32 0.00 0.00 2.32
2403 2419 2.281208 CTCACGAACCGGGGCAAA 60.281 61.111 6.32 0.00 0.00 3.68
2408 2424 4.760047 CTGGGCTCACGAACCGGG 62.760 72.222 6.32 0.00 0.00 5.73
2409 2425 4.760047 CCTGGGCTCACGAACCGG 62.760 72.222 0.00 0.00 0.00 5.28
2410 2426 4.760047 CCCTGGGCTCACGAACCG 62.760 72.222 0.00 0.00 0.00 4.44
2411 2427 4.410400 CCCCTGGGCTCACGAACC 62.410 72.222 7.39 0.00 0.00 3.62
2412 2428 4.410400 CCCCCTGGGCTCACGAAC 62.410 72.222 7.39 0.00 35.35 3.95
2439 2455 3.061848 GACCAATGGCCCACGTGG 61.062 66.667 28.26 28.26 37.09 4.94
2440 2456 3.061848 GGACCAATGGCCCACGTG 61.062 66.667 9.08 9.08 0.00 4.49
2441 2457 4.360405 GGGACCAATGGCCCACGT 62.360 66.667 21.67 0.00 38.39 4.49
2445 2461 4.376170 AACCGGGACCAATGGCCC 62.376 66.667 18.15 18.15 36.26 5.80
2446 2462 2.754254 GAACCGGGACCAATGGCC 60.754 66.667 6.32 0.00 0.00 5.36
2447 2463 3.131478 CGAACCGGGACCAATGGC 61.131 66.667 6.32 0.00 0.00 4.40
2448 2464 1.743995 GACGAACCGGGACCAATGG 60.744 63.158 6.32 0.00 0.00 3.16
2449 2465 1.743995 GGACGAACCGGGACCAATG 60.744 63.158 6.32 0.00 0.00 2.82
2450 2466 2.666812 GGACGAACCGGGACCAAT 59.333 61.111 6.32 0.00 0.00 3.16
2459 2475 1.232621 CCAAAAGGTCCGGACGAACC 61.233 60.000 27.68 15.23 35.69 3.62
2460 2476 0.533531 ACCAAAAGGTCCGGACGAAC 60.534 55.000 27.68 14.58 0.00 3.95
2461 2477 0.249996 GACCAAAAGGTCCGGACGAA 60.250 55.000 27.68 0.00 33.21 3.85
2462 2478 1.368579 GACCAAAAGGTCCGGACGA 59.631 57.895 27.68 0.00 33.21 4.20
2463 2479 3.961729 GACCAAAAGGTCCGGACG 58.038 61.111 27.68 15.31 33.21 4.79
2469 2485 1.176619 CCAACCGGGACCAAAAGGTC 61.177 60.000 6.32 6.11 40.01 3.85
2470 2486 1.152631 CCAACCGGGACCAAAAGGT 60.153 57.895 6.32 0.00 40.01 3.50
2471 2487 1.152631 ACCAACCGGGACCAAAAGG 60.153 57.895 6.32 0.00 41.15 3.11
2472 2488 1.460273 CCACCAACCGGGACCAAAAG 61.460 60.000 6.32 0.00 41.15 2.27
2473 2489 1.455959 CCACCAACCGGGACCAAAA 60.456 57.895 6.32 0.00 41.15 2.44
2474 2490 2.196229 CCACCAACCGGGACCAAA 59.804 61.111 6.32 0.00 41.15 3.28
2480 2496 3.943691 TTCGTCCCACCAACCGGG 61.944 66.667 6.32 0.00 46.03 5.73
2481 2497 2.667199 GTTCGTCCCACCAACCGG 60.667 66.667 0.00 0.00 38.77 5.28
2482 2498 2.667199 GGTTCGTCCCACCAACCG 60.667 66.667 0.00 0.00 34.04 4.44
2483 2499 2.667199 CGGTTCGTCCCACCAACC 60.667 66.667 0.00 0.00 36.91 3.77
2484 2500 2.667199 CCGGTTCGTCCCACCAAC 60.667 66.667 0.00 0.00 33.36 3.77
2485 2501 3.943691 CCCGGTTCGTCCCACCAA 61.944 66.667 0.00 0.00 33.36 3.67
2486 2502 4.938074 TCCCGGTTCGTCCCACCA 62.938 66.667 0.00 0.00 33.36 4.17
2487 2503 4.383861 GTCCCGGTTCGTCCCACC 62.384 72.222 0.00 0.00 0.00 4.61
2488 2504 4.383861 GGTCCCGGTTCGTCCCAC 62.384 72.222 0.00 0.00 0.00 4.61
2489 2505 4.938074 TGGTCCCGGTTCGTCCCA 62.938 66.667 0.00 0.00 0.00 4.37
2490 2506 2.963101 ATTGGTCCCGGTTCGTCCC 61.963 63.158 0.00 0.00 0.00 4.46
2491 2507 1.743995 CATTGGTCCCGGTTCGTCC 60.744 63.158 0.00 0.00 0.00 4.79
2492 2508 1.743995 CCATTGGTCCCGGTTCGTC 60.744 63.158 0.00 0.00 0.00 4.20
2493 2509 2.349755 CCATTGGTCCCGGTTCGT 59.650 61.111 0.00 0.00 0.00 3.85
2494 2510 1.743995 GACCATTGGTCCCGGTTCG 60.744 63.158 23.00 0.00 46.19 3.95
2495 2511 4.313819 GACCATTGGTCCCGGTTC 57.686 61.111 23.00 0.00 46.19 3.62
2503 2519 1.542375 AGGAGCCAGGACCATTGGT 60.542 57.895 8.42 8.42 39.44 3.67
2504 2520 1.077212 CAGGAGCCAGGACCATTGG 60.077 63.158 0.00 0.00 38.78 3.16
2505 2521 1.077212 CCAGGAGCCAGGACCATTG 60.077 63.158 0.00 0.00 0.00 2.82
2506 2522 2.988839 GCCAGGAGCCAGGACCATT 61.989 63.158 1.65 0.00 34.35 3.16
2507 2523 3.415087 GCCAGGAGCCAGGACCAT 61.415 66.667 1.65 0.00 34.35 3.55
2516 2532 0.475906 AATAGTGATGGGCCAGGAGC 59.524 55.000 13.78 1.99 42.60 4.70
2517 2533 1.202855 CCAATAGTGATGGGCCAGGAG 60.203 57.143 13.78 0.00 34.15 3.69
2518 2534 0.846015 CCAATAGTGATGGGCCAGGA 59.154 55.000 13.78 0.00 34.15 3.86
2519 2535 0.552848 ACCAATAGTGATGGGCCAGG 59.447 55.000 13.78 7.57 42.48 4.45
2520 2536 1.972872 GACCAATAGTGATGGGCCAG 58.027 55.000 13.78 0.00 40.33 4.85
2523 2539 0.535102 CGGGACCAATAGTGATGGGC 60.535 60.000 0.00 0.00 45.89 5.36
2524 2540 0.108585 CCGGGACCAATAGTGATGGG 59.891 60.000 0.00 0.00 42.48 4.00
2525 2541 0.837272 ACCGGGACCAATAGTGATGG 59.163 55.000 6.32 0.00 43.84 3.51
2526 2542 2.288666 CAACCGGGACCAATAGTGATG 58.711 52.381 6.32 0.00 0.00 3.07
2527 2543 1.211949 CCAACCGGGACCAATAGTGAT 59.788 52.381 6.32 0.00 40.01 3.06
2528 2544 0.616371 CCAACCGGGACCAATAGTGA 59.384 55.000 6.32 0.00 40.01 3.41
2529 2545 0.326927 ACCAACCGGGACCAATAGTG 59.673 55.000 6.32 0.00 41.15 2.74
2530 2546 0.326927 CACCAACCGGGACCAATAGT 59.673 55.000 6.32 0.00 41.15 2.12
2531 2547 0.393808 CCACCAACCGGGACCAATAG 60.394 60.000 6.32 0.00 41.15 1.73
2532 2548 1.686416 CCACCAACCGGGACCAATA 59.314 57.895 6.32 0.00 41.15 1.90
2533 2549 2.438795 CCACCAACCGGGACCAAT 59.561 61.111 6.32 0.00 41.15 3.16
2534 2550 4.589675 GCCACCAACCGGGACCAA 62.590 66.667 6.32 0.00 41.15 3.67
2536 2552 4.360405 ATGCCACCAACCGGGACC 62.360 66.667 6.32 0.00 41.15 4.46
2537 2553 3.061848 CATGCCACCAACCGGGAC 61.062 66.667 6.32 0.00 41.15 4.46
2538 2554 2.835049 TTCATGCCACCAACCGGGA 61.835 57.895 6.32 0.00 41.15 5.14
2539 2555 2.282816 TTCATGCCACCAACCGGG 60.283 61.111 6.32 0.00 44.81 5.73
2540 2556 1.250154 ATGTTCATGCCACCAACCGG 61.250 55.000 0.00 0.00 38.77 5.28
2541 2557 0.109179 CATGTTCATGCCACCAACCG 60.109 55.000 0.00 0.00 0.00 4.44
2542 2558 1.255882 TCATGTTCATGCCACCAACC 58.744 50.000 7.80 0.00 0.00 3.77
2543 2559 2.610232 GGTTCATGTTCATGCCACCAAC 60.610 50.000 19.70 13.33 0.00 3.77
2544 2560 1.617850 GGTTCATGTTCATGCCACCAA 59.382 47.619 19.70 5.10 0.00 3.67
2545 2561 1.255882 GGTTCATGTTCATGCCACCA 58.744 50.000 19.70 0.24 0.00 4.17
2546 2562 0.171007 CGGTTCATGTTCATGCCACC 59.829 55.000 16.91 16.91 0.00 4.61
2547 2563 0.171007 CCGGTTCATGTTCATGCCAC 59.829 55.000 7.80 7.03 0.00 5.01
2548 2564 0.964860 CCCGGTTCATGTTCATGCCA 60.965 55.000 0.00 0.00 0.00 4.92
2549 2565 0.679640 TCCCGGTTCATGTTCATGCC 60.680 55.000 0.00 4.18 0.00 4.40
2550 2566 0.451783 GTCCCGGTTCATGTTCATGC 59.548 55.000 0.00 0.00 0.00 4.06
2551 2567 1.094785 GGTCCCGGTTCATGTTCATG 58.905 55.000 0.00 6.46 0.00 3.07
2552 2568 0.695924 TGGTCCCGGTTCATGTTCAT 59.304 50.000 0.00 0.00 0.00 2.57
2553 2569 0.474614 TTGGTCCCGGTTCATGTTCA 59.525 50.000 0.00 0.00 0.00 3.18
2554 2570 1.611519 TTTGGTCCCGGTTCATGTTC 58.388 50.000 0.00 0.00 0.00 3.18
2555 2571 1.960689 CTTTTGGTCCCGGTTCATGTT 59.039 47.619 0.00 0.00 0.00 2.71
2556 2572 1.616159 CTTTTGGTCCCGGTTCATGT 58.384 50.000 0.00 0.00 0.00 3.21
2557 2573 0.887933 CCTTTTGGTCCCGGTTCATG 59.112 55.000 0.00 0.00 34.07 3.07
2558 2574 0.251608 CCCTTTTGGTCCCGGTTCAT 60.252 55.000 0.00 0.00 38.10 2.57
2559 2575 1.151908 CCCTTTTGGTCCCGGTTCA 59.848 57.895 0.00 0.00 38.10 3.18
2560 2576 4.090723 CCCTTTTGGTCCCGGTTC 57.909 61.111 0.00 0.00 38.10 3.62


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.