Multiple sequence alignment - TraesCS5B01G364400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G364400 chr5B 100.000 3101 0 0 1 3101 542987762 542984662 0.000000e+00 5727.0
1 TraesCS5B01G364400 chr5B 88.889 72 4 3 1082 1149 681044038 681044109 5.510000e-13 86.1
2 TraesCS5B01G364400 chr5B 95.918 49 2 0 521 569 661255142 661255094 2.560000e-11 80.5
3 TraesCS5B01G364400 chr5B 89.286 56 4 2 518 573 257005371 257005318 5.550000e-08 69.4
4 TraesCS5B01G364400 chr5D 93.481 1534 81 8 571 2102 445383195 445381679 0.000000e+00 2261.0
5 TraesCS5B01G364400 chr5D 88.866 485 23 11 9 466 445383662 445383182 4.490000e-158 568.0
6 TraesCS5B01G364400 chr5D 85.326 184 16 6 2271 2444 445381615 445381433 2.460000e-41 180.0
7 TraesCS5B01G364400 chr5D 90.625 96 9 0 2439 2534 278275198 278275103 9.030000e-26 128.0
8 TraesCS5B01G364400 chr5D 76.498 217 34 9 2880 3090 445381196 445380991 5.470000e-18 102.0
9 TraesCS5B01G364400 chr5D 90.385 52 4 1 518 569 508568570 508568520 2.000000e-07 67.6
10 TraesCS5B01G364400 chr3D 84.015 1076 153 14 1033 2099 597398057 597399122 0.000000e+00 1016.0
11 TraesCS5B01G364400 chr4B 83.286 1059 156 17 1033 2081 650601689 650600642 0.000000e+00 955.0
12 TraesCS5B01G364400 chr4B 93.023 86 5 1 2441 2525 438099361 438099446 1.170000e-24 124.0
13 TraesCS5B01G364400 chrUn 83.223 1055 156 14 1059 2095 30047510 30048561 0.000000e+00 948.0
14 TraesCS5B01G364400 chr4A 82.576 1079 174 8 1030 2097 729114044 729115119 0.000000e+00 939.0
15 TraesCS5B01G364400 chr4A 82.286 1050 171 10 1059 2097 728728969 728727924 0.000000e+00 894.0
16 TraesCS5B01G364400 chr4A 96.296 54 1 1 521 574 113574870 113574818 1.530000e-13 87.9
17 TraesCS5B01G364400 chr5A 83.003 1059 148 20 1059 2095 706564000 706565048 0.000000e+00 929.0
18 TraesCS5B01G364400 chr5A 82.580 1062 157 18 1040 2081 688666232 688665179 0.000000e+00 911.0
19 TraesCS5B01G364400 chr5A 95.000 540 26 1 1393 1932 562999154 562998616 0.000000e+00 846.0
20 TraesCS5B01G364400 chr5A 91.511 589 43 2 808 1396 562999816 562999235 0.000000e+00 804.0
21 TraesCS5B01G364400 chr5A 86.546 498 31 17 1 466 563006427 563005934 1.650000e-142 516.0
22 TraesCS5B01G364400 chr5A 91.111 225 13 3 571 795 563005947 563005730 6.500000e-77 298.0
23 TraesCS5B01G364400 chr5A 76.875 480 51 26 2593 3060 562995708 562995277 1.870000e-52 217.0
24 TraesCS5B01G364400 chr5A 86.592 179 17 3 2271 2443 562995945 562995768 1.140000e-44 191.0
25 TraesCS5B01G364400 chr5A 90.625 96 8 1 2438 2533 266913413 266913319 3.250000e-25 126.0
26 TraesCS5B01G364400 chr4D 82.431 1053 162 15 1059 2095 503969940 503968895 0.000000e+00 898.0
27 TraesCS5B01G364400 chr4D 86.042 480 62 4 1626 2103 504068721 504068245 7.670000e-141 510.0
28 TraesCS5B01G364400 chr4D 93.333 90 4 2 2441 2530 389092224 389092137 6.980000e-27 132.0
29 TraesCS5B01G364400 chr3B 92.632 95 6 1 2432 2525 5967968 5967874 5.390000e-28 135.0
30 TraesCS5B01G364400 chr1D 94.253 87 5 0 2439 2525 355081129 355081215 1.940000e-27 134.0
31 TraesCS5B01G364400 chr7D 92.391 92 7 0 2438 2529 362365299 362365390 6.980000e-27 132.0
32 TraesCS5B01G364400 chr7D 78.571 126 16 7 2103 2228 85229735 85229849 4.290000e-09 73.1
33 TraesCS5B01G364400 chr2D 92.473 93 6 1 2434 2525 164992676 164992768 6.980000e-27 132.0
34 TraesCS5B01G364400 chr1A 91.398 93 6 2 2438 2530 64118320 64118410 3.250000e-25 126.0
35 TraesCS5B01G364400 chr2B 84.058 138 10 6 2098 2225 53029502 53029637 4.200000e-24 122.0
36 TraesCS5B01G364400 chr2A 83.333 144 12 6 2098 2231 35376053 35376194 4.200000e-24 122.0
37 TraesCS5B01G364400 chr7A 92.063 63 4 1 2101 2163 86246529 86246590 1.530000e-13 87.9


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G364400 chr5B 542984662 542987762 3100 True 5727.00 5727 100.00000 1 3101 1 chr5B.!!$R2 3100
1 TraesCS5B01G364400 chr5D 445380991 445383662 2671 True 777.75 2261 86.04275 9 3090 4 chr5D.!!$R3 3081
2 TraesCS5B01G364400 chr3D 597398057 597399122 1065 False 1016.00 1016 84.01500 1033 2099 1 chr3D.!!$F1 1066
3 TraesCS5B01G364400 chr4B 650600642 650601689 1047 True 955.00 955 83.28600 1033 2081 1 chr4B.!!$R1 1048
4 TraesCS5B01G364400 chrUn 30047510 30048561 1051 False 948.00 948 83.22300 1059 2095 1 chrUn.!!$F1 1036
5 TraesCS5B01G364400 chr4A 729114044 729115119 1075 False 939.00 939 82.57600 1030 2097 1 chr4A.!!$F1 1067
6 TraesCS5B01G364400 chr4A 728727924 728728969 1045 True 894.00 894 82.28600 1059 2097 1 chr4A.!!$R2 1038
7 TraesCS5B01G364400 chr5A 706564000 706565048 1048 False 929.00 929 83.00300 1059 2095 1 chr5A.!!$F1 1036
8 TraesCS5B01G364400 chr5A 688665179 688666232 1053 True 911.00 911 82.58000 1040 2081 1 chr5A.!!$R2 1041
9 TraesCS5B01G364400 chr5A 562995277 562999816 4539 True 514.50 846 87.49450 808 3060 4 chr5A.!!$R3 2252
10 TraesCS5B01G364400 chr5A 563005730 563006427 697 True 407.00 516 88.82850 1 795 2 chr5A.!!$R4 794
11 TraesCS5B01G364400 chr4D 503968895 503969940 1045 True 898.00 898 82.43100 1059 2095 1 chr4D.!!$R2 1036

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
896 939 0.034767 TCGGTCAGTACTCGGTGGAT 60.035 55.0 0.0 0.0 0.0 3.41 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2780 5408 0.036022 AGAGCTGCTGTTTGGACCTC 59.964 55.0 7.01 0.0 0.0 3.85 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
180 184 2.909140 GCTAGAAGAGCCTCCAGGT 58.091 57.895 0.00 0.00 46.41 4.00
181 185 2.074729 GCTAGAAGAGCCTCCAGGTA 57.925 55.000 0.00 0.00 46.41 3.08
190 194 0.392336 GCCTCCAGGTATCTGCTCTG 59.608 60.000 0.00 0.00 39.61 3.35
199 203 1.050988 TATCTGCTCTGACCTGCCCC 61.051 60.000 0.00 0.00 0.00 5.80
200 204 2.836672 ATCTGCTCTGACCTGCCCCT 62.837 60.000 0.00 0.00 0.00 4.79
219 223 3.057315 CCCTCAGGTGCTTGTGTTTATTG 60.057 47.826 0.00 0.00 0.00 1.90
264 275 0.684479 TCGAGCAGCCACCTAGTGAT 60.684 55.000 0.00 0.00 35.23 3.06
334 362 0.467290 TTGGCTTCCTTGGCTTCGTT 60.467 50.000 0.00 0.00 0.00 3.85
364 398 5.934625 GGGTACTATGATATGCAAGAAGGTG 59.065 44.000 0.00 0.00 0.00 4.00
374 408 1.731720 CAAGAAGGTGGACTAGCAGC 58.268 55.000 0.00 0.00 0.00 5.25
397 432 5.007626 GCACTATGATATGCAAGAAAACCGA 59.992 40.000 0.00 0.00 41.65 4.69
418 458 1.467342 CCGATTCGACAGGTTTTTCCC 59.533 52.381 7.83 0.00 36.75 3.97
422 462 0.180878 TCGACAGGTTTTTCCCGGTT 59.819 50.000 0.00 0.00 32.75 4.44
447 487 1.303236 TGGGATGGTTTGTGGAGCG 60.303 57.895 0.00 0.00 0.00 5.03
463 503 2.746277 CGGAAGAAACCGCCAGGG 60.746 66.667 0.00 0.00 46.20 4.45
474 514 3.775654 GCCAGGGTCTCTCGGGTG 61.776 72.222 0.00 0.00 0.00 4.61
475 515 2.037367 CCAGGGTCTCTCGGGTGA 59.963 66.667 0.00 0.00 0.00 4.02
476 516 2.055042 CCAGGGTCTCTCGGGTGAG 61.055 68.421 0.00 0.00 43.99 3.51
487 527 4.013702 GGGTGAGAGCCGAGTACA 57.986 61.111 0.00 0.00 0.00 2.90
488 528 1.810532 GGGTGAGAGCCGAGTACAG 59.189 63.158 0.00 0.00 0.00 2.74
489 529 1.668101 GGGTGAGAGCCGAGTACAGG 61.668 65.000 0.00 0.00 0.00 4.00
490 530 0.966370 GGTGAGAGCCGAGTACAGGT 60.966 60.000 8.83 0.00 0.00 4.00
491 531 0.889306 GTGAGAGCCGAGTACAGGTT 59.111 55.000 8.83 3.22 0.00 3.50
492 532 1.272769 GTGAGAGCCGAGTACAGGTTT 59.727 52.381 8.83 0.00 0.00 3.27
493 533 1.968493 TGAGAGCCGAGTACAGGTTTT 59.032 47.619 8.83 0.00 0.00 2.43
494 534 2.367567 TGAGAGCCGAGTACAGGTTTTT 59.632 45.455 8.83 0.00 0.00 1.94
495 535 2.994578 GAGAGCCGAGTACAGGTTTTTC 59.005 50.000 8.83 2.92 0.00 2.29
496 536 2.633481 AGAGCCGAGTACAGGTTTTTCT 59.367 45.455 8.83 5.22 0.00 2.52
497 537 3.830755 AGAGCCGAGTACAGGTTTTTCTA 59.169 43.478 8.83 0.00 0.00 2.10
498 538 4.282703 AGAGCCGAGTACAGGTTTTTCTAA 59.717 41.667 8.83 0.00 0.00 2.10
499 539 4.313282 AGCCGAGTACAGGTTTTTCTAAC 58.687 43.478 8.83 0.00 0.00 2.34
500 540 3.434641 GCCGAGTACAGGTTTTTCTAACC 59.565 47.826 8.83 0.00 40.58 2.85
501 541 4.634199 CCGAGTACAGGTTTTTCTAACCA 58.366 43.478 9.17 0.00 42.69 3.67
502 542 4.450080 CCGAGTACAGGTTTTTCTAACCAC 59.550 45.833 9.17 0.00 42.69 4.16
503 543 4.450080 CGAGTACAGGTTTTTCTAACCACC 59.550 45.833 9.17 0.00 42.69 4.61
504 544 5.618236 GAGTACAGGTTTTTCTAACCACCT 58.382 41.667 9.17 0.00 42.69 4.00
505 545 6.517194 CGAGTACAGGTTTTTCTAACCACCTA 60.517 42.308 9.17 0.00 42.69 3.08
506 546 6.766429 AGTACAGGTTTTTCTAACCACCTAG 58.234 40.000 9.17 0.00 42.69 3.02
507 547 5.899631 ACAGGTTTTTCTAACCACCTAGA 57.100 39.130 9.17 0.00 42.69 2.43
508 548 5.618236 ACAGGTTTTTCTAACCACCTAGAC 58.382 41.667 9.17 0.00 42.69 2.59
509 549 5.368816 ACAGGTTTTTCTAACCACCTAGACT 59.631 40.000 9.17 0.00 42.69 3.24
510 550 6.556116 ACAGGTTTTTCTAACCACCTAGACTA 59.444 38.462 9.17 0.00 42.69 2.59
511 551 6.872547 CAGGTTTTTCTAACCACCTAGACTAC 59.127 42.308 9.17 0.00 42.69 2.73
512 552 5.866092 GGTTTTTCTAACCACCTAGACTACG 59.134 44.000 1.93 0.00 40.03 3.51
513 553 6.294731 GGTTTTTCTAACCACCTAGACTACGA 60.295 42.308 1.93 0.00 40.03 3.43
514 554 5.886960 TTTCTAACCACCTAGACTACGAC 57.113 43.478 0.00 0.00 0.00 4.34
515 555 3.525537 TCTAACCACCTAGACTACGACG 58.474 50.000 0.00 0.00 0.00 5.12
516 556 1.457346 AACCACCTAGACTACGACGG 58.543 55.000 0.00 0.00 0.00 4.79
517 557 0.615331 ACCACCTAGACTACGACGGA 59.385 55.000 0.00 0.00 0.00 4.69
518 558 1.211457 ACCACCTAGACTACGACGGAT 59.789 52.381 0.00 0.00 0.00 4.18
519 559 1.872313 CCACCTAGACTACGACGGATC 59.128 57.143 0.00 0.00 0.00 3.36
528 568 3.997561 CGACGGATCGTGGTGATG 58.002 61.111 0.00 0.00 43.66 3.07
529 569 1.138883 CGACGGATCGTGGTGATGT 59.861 57.895 0.00 0.00 43.66 3.06
530 570 0.457853 CGACGGATCGTGGTGATGTT 60.458 55.000 0.00 0.00 43.66 2.71
531 571 1.722011 GACGGATCGTGGTGATGTTT 58.278 50.000 0.00 0.00 41.37 2.83
532 572 1.393539 GACGGATCGTGGTGATGTTTG 59.606 52.381 0.00 0.00 41.37 2.93
533 573 0.096976 CGGATCGTGGTGATGTTTGC 59.903 55.000 0.00 0.00 37.47 3.68
534 574 1.453155 GGATCGTGGTGATGTTTGCT 58.547 50.000 0.00 0.00 37.47 3.91
535 575 1.812571 GGATCGTGGTGATGTTTGCTT 59.187 47.619 0.00 0.00 37.47 3.91
536 576 2.228822 GGATCGTGGTGATGTTTGCTTT 59.771 45.455 0.00 0.00 37.47 3.51
537 577 3.438781 GGATCGTGGTGATGTTTGCTTTA 59.561 43.478 0.00 0.00 37.47 1.85
538 578 4.096382 GGATCGTGGTGATGTTTGCTTTAT 59.904 41.667 0.00 0.00 37.47 1.40
539 579 4.418013 TCGTGGTGATGTTTGCTTTATG 57.582 40.909 0.00 0.00 0.00 1.90
540 580 4.068599 TCGTGGTGATGTTTGCTTTATGA 58.931 39.130 0.00 0.00 0.00 2.15
541 581 4.699735 TCGTGGTGATGTTTGCTTTATGAT 59.300 37.500 0.00 0.00 0.00 2.45
542 582 5.877564 TCGTGGTGATGTTTGCTTTATGATA 59.122 36.000 0.00 0.00 0.00 2.15
543 583 6.542005 TCGTGGTGATGTTTGCTTTATGATAT 59.458 34.615 0.00 0.00 0.00 1.63
544 584 7.713073 TCGTGGTGATGTTTGCTTTATGATATA 59.287 33.333 0.00 0.00 0.00 0.86
545 585 8.341903 CGTGGTGATGTTTGCTTTATGATATAA 58.658 33.333 0.00 0.00 0.00 0.98
553 593 4.965119 GCTTTATGATATAAAGCGGGGG 57.035 45.455 22.81 2.54 46.31 5.40
554 594 3.128764 GCTTTATGATATAAAGCGGGGGC 59.871 47.826 22.81 7.51 46.31 5.80
555 595 4.331968 CTTTATGATATAAAGCGGGGGCA 58.668 43.478 8.01 0.00 0.00 5.36
556 596 2.969821 ATGATATAAAGCGGGGGCAA 57.030 45.000 0.00 0.00 0.00 4.52
557 597 1.975660 TGATATAAAGCGGGGGCAAC 58.024 50.000 0.00 0.00 0.00 4.17
572 612 3.455990 GGCAACCCTTTTTCGGTTAAA 57.544 42.857 0.00 0.00 41.78 1.52
573 613 3.125316 GGCAACCCTTTTTCGGTTAAAC 58.875 45.455 0.00 0.00 41.78 2.01
574 614 3.125316 GCAACCCTTTTTCGGTTAAACC 58.875 45.455 0.00 0.00 41.78 3.27
617 657 0.471780 TCTTCTGGCAGTCTGGTCCA 60.472 55.000 15.27 0.46 0.00 4.02
641 681 8.438513 CCAGTTATTTAATCTATGATCTGCACG 58.561 37.037 0.00 0.00 0.00 5.34
652 692 3.194062 TGATCTGCACGCGATGATAAAA 58.806 40.909 15.93 0.00 0.00 1.52
699 740 5.068591 GGAAATCACTGGTACCAAGTGTTTT 59.931 40.000 29.52 29.52 37.83 2.43
705 746 5.009610 CACTGGTACCAAGTGTTTTGCTTAT 59.990 40.000 24.78 0.00 0.00 1.73
706 747 6.205853 CACTGGTACCAAGTGTTTTGCTTATA 59.794 38.462 24.78 0.00 0.00 0.98
707 748 6.946009 ACTGGTACCAAGTGTTTTGCTTATAT 59.054 34.615 17.11 0.00 0.00 0.86
708 749 8.104566 ACTGGTACCAAGTGTTTTGCTTATATA 58.895 33.333 17.11 0.00 0.00 0.86
752 793 5.334724 ACTTCCTTTGCATGAATCATTCC 57.665 39.130 0.00 0.00 0.00 3.01
770 811 8.970859 ATCATTCCATGACTTACTTTCTTAGG 57.029 34.615 0.00 0.00 43.01 2.69
774 815 9.668497 ATTCCATGACTTACTTTCTTAGGTTAC 57.332 33.333 0.00 0.00 0.00 2.50
841 883 0.804364 CGCAGATTGCTTGGCAGTAA 59.196 50.000 0.00 0.00 42.25 2.24
890 932 4.103357 CCAAAAGTATCGGTCAGTACTCG 58.897 47.826 0.00 0.00 31.10 4.18
896 939 0.034767 TCGGTCAGTACTCGGTGGAT 60.035 55.000 0.00 0.00 0.00 3.41
897 940 0.815734 CGGTCAGTACTCGGTGGATT 59.184 55.000 0.00 0.00 0.00 3.01
898 941 1.469251 CGGTCAGTACTCGGTGGATTG 60.469 57.143 0.00 0.00 0.00 2.67
899 942 1.134788 GGTCAGTACTCGGTGGATTGG 60.135 57.143 0.00 0.00 0.00 3.16
1001 1044 8.088365 ACACATTGAGTATATATGCACGTACAT 58.912 33.333 6.50 6.50 0.00 2.29
1011 1054 2.421619 TGCACGTACATGAGCATTCAA 58.578 42.857 0.00 0.00 36.78 2.69
1014 1057 3.725895 GCACGTACATGAGCATTCAAGTG 60.726 47.826 0.00 0.00 36.09 3.16
1017 1060 3.062639 CGTACATGAGCATTCAAGTGACC 59.937 47.826 0.00 0.00 36.09 4.02
1037 1080 0.170339 GCAACACCCATAACTTCCGC 59.830 55.000 0.00 0.00 0.00 5.54
1057 1100 1.080569 GCCATGGCCAACAACTTCG 60.081 57.895 27.24 0.00 34.56 3.79
1074 1117 6.128117 ACAACTTCGCTTCTTCAGTTAACAAA 60.128 34.615 8.61 0.94 0.00 2.83
1168 1211 1.289231 ACTCTCTGCTCCAGGGTATGA 59.711 52.381 0.00 0.00 33.01 2.15
1173 1216 1.227380 GCTCCAGGGTATGAGTGCG 60.227 63.158 0.00 0.00 0.00 5.34
1416 1558 1.464395 TGGTACTTGGGGCTGGGAA 60.464 57.895 0.00 0.00 0.00 3.97
1468 1610 1.222115 GCTATCCCGCAATGACGACC 61.222 60.000 0.00 0.00 34.06 4.79
1779 1924 6.070538 AGGCACTTCTTCACTTCATATACACT 60.071 38.462 0.00 0.00 27.25 3.55
2084 4666 5.852282 ATTATGGTGGACATTTTAGGCAC 57.148 39.130 0.00 0.00 41.03 5.01
2099 4681 3.065306 CACAGTCGCCCCACCTTA 58.935 61.111 0.00 0.00 0.00 2.69
2100 4682 1.373435 CACAGTCGCCCCACCTTAA 59.627 57.895 0.00 0.00 0.00 1.85
2101 4683 0.673644 CACAGTCGCCCCACCTTAAG 60.674 60.000 0.00 0.00 0.00 1.85
2102 4684 1.078426 CAGTCGCCCCACCTTAAGG 60.078 63.158 20.42 20.42 42.17 2.69
2107 4689 4.764143 CCCCACCTTAAGGGCTTG 57.236 61.111 25.31 14.21 45.39 4.01
2108 4690 1.774300 CCCCACCTTAAGGGCTTGT 59.226 57.895 25.31 0.70 45.39 3.16
2109 4691 0.114364 CCCCACCTTAAGGGCTTGTT 59.886 55.000 25.31 0.00 45.39 2.83
2110 4692 1.545841 CCCACCTTAAGGGCTTGTTC 58.454 55.000 25.31 0.00 39.96 3.18
2111 4693 1.165270 CCACCTTAAGGGCTTGTTCG 58.835 55.000 25.31 3.49 40.27 3.95
2112 4694 1.165270 CACCTTAAGGGCTTGTTCGG 58.835 55.000 25.31 0.00 40.27 4.30
2113 4695 0.769247 ACCTTAAGGGCTTGTTCGGT 59.231 50.000 25.31 0.00 40.27 4.69
2114 4696 1.144298 ACCTTAAGGGCTTGTTCGGTT 59.856 47.619 25.31 0.00 40.27 4.44
2115 4697 2.372837 ACCTTAAGGGCTTGTTCGGTTA 59.627 45.455 25.31 0.00 40.27 2.85
2116 4698 3.007635 CCTTAAGGGCTTGTTCGGTTAG 58.992 50.000 14.25 0.00 0.00 2.34
2117 4699 2.773993 TAAGGGCTTGTTCGGTTAGG 57.226 50.000 0.00 0.00 0.00 2.69
2118 4700 0.608308 AAGGGCTTGTTCGGTTAGGC 60.608 55.000 0.00 0.00 0.00 3.93
2119 4701 2.396157 GGGCTTGTTCGGTTAGGCG 61.396 63.158 0.00 0.00 35.49 5.52
2120 4702 2.396157 GGCTTGTTCGGTTAGGCGG 61.396 63.158 0.00 0.00 0.00 6.13
2121 4703 2.396157 GCTTGTTCGGTTAGGCGGG 61.396 63.158 0.00 0.00 0.00 6.13
2122 4704 1.743995 CTTGTTCGGTTAGGCGGGG 60.744 63.158 0.00 0.00 0.00 5.73
2123 4705 2.459202 CTTGTTCGGTTAGGCGGGGT 62.459 60.000 0.00 0.00 0.00 4.95
2124 4706 2.054473 TTGTTCGGTTAGGCGGGGTT 62.054 55.000 0.00 0.00 0.00 4.11
2125 4707 1.302752 GTTCGGTTAGGCGGGGTTT 60.303 57.895 0.00 0.00 0.00 3.27
2126 4708 1.302671 TTCGGTTAGGCGGGGTTTG 60.303 57.895 0.00 0.00 0.00 2.93
2127 4709 1.766625 TTCGGTTAGGCGGGGTTTGA 61.767 55.000 0.00 0.00 0.00 2.69
2128 4710 1.302671 CGGTTAGGCGGGGTTTGAA 60.303 57.895 0.00 0.00 0.00 2.69
2129 4711 1.303091 CGGTTAGGCGGGGTTTGAAG 61.303 60.000 0.00 0.00 0.00 3.02
2130 4712 0.037160 GGTTAGGCGGGGTTTGAAGA 59.963 55.000 0.00 0.00 0.00 2.87
2131 4713 1.450025 GTTAGGCGGGGTTTGAAGAG 58.550 55.000 0.00 0.00 0.00 2.85
2132 4714 0.326927 TTAGGCGGGGTTTGAAGAGG 59.673 55.000 0.00 0.00 0.00 3.69
2133 4715 0.838987 TAGGCGGGGTTTGAAGAGGT 60.839 55.000 0.00 0.00 0.00 3.85
2134 4716 1.228459 GGCGGGGTTTGAAGAGGTT 60.228 57.895 0.00 0.00 0.00 3.50
2135 4717 0.826256 GGCGGGGTTTGAAGAGGTTT 60.826 55.000 0.00 0.00 0.00 3.27
2136 4718 0.596577 GCGGGGTTTGAAGAGGTTTC 59.403 55.000 0.00 0.00 0.00 2.78
2137 4719 1.975660 CGGGGTTTGAAGAGGTTTCA 58.024 50.000 0.00 0.00 0.00 2.69
2138 4720 2.303175 CGGGGTTTGAAGAGGTTTCAA 58.697 47.619 0.00 0.00 36.71 2.69
2139 4721 2.691011 CGGGGTTTGAAGAGGTTTCAAA 59.309 45.455 10.14 10.14 43.62 2.69
2140 4722 3.243401 CGGGGTTTGAAGAGGTTTCAAAG 60.243 47.826 13.56 1.59 45.58 2.77
2141 4723 3.069586 GGGGTTTGAAGAGGTTTCAAAGG 59.930 47.826 13.56 0.00 45.58 3.11
2142 4724 3.069586 GGGTTTGAAGAGGTTTCAAAGGG 59.930 47.826 13.56 0.00 45.58 3.95
2143 4725 3.069586 GGTTTGAAGAGGTTTCAAAGGGG 59.930 47.826 13.56 0.00 45.58 4.79
2144 4726 3.958147 GTTTGAAGAGGTTTCAAAGGGGA 59.042 43.478 13.56 0.00 45.58 4.81
2145 4727 4.469469 TTGAAGAGGTTTCAAAGGGGAT 57.531 40.909 0.19 0.00 35.69 3.85
2146 4728 4.469469 TGAAGAGGTTTCAAAGGGGATT 57.531 40.909 0.00 0.00 0.00 3.01
2147 4729 5.592587 TGAAGAGGTTTCAAAGGGGATTA 57.407 39.130 0.00 0.00 0.00 1.75
2148 4730 5.959512 TGAAGAGGTTTCAAAGGGGATTAA 58.040 37.500 0.00 0.00 0.00 1.40
2149 4731 6.377912 TGAAGAGGTTTCAAAGGGGATTAAA 58.622 36.000 0.00 0.00 0.00 1.52
2150 4732 7.016296 TGAAGAGGTTTCAAAGGGGATTAAAT 58.984 34.615 0.00 0.00 0.00 1.40
2151 4733 7.178451 TGAAGAGGTTTCAAAGGGGATTAAATC 59.822 37.037 0.00 0.00 0.00 2.17
2152 4734 6.805150 AGAGGTTTCAAAGGGGATTAAATCT 58.195 36.000 0.00 0.00 0.00 2.40
2153 4735 6.892456 AGAGGTTTCAAAGGGGATTAAATCTC 59.108 38.462 0.00 0.00 37.49 2.75
2154 4736 6.805150 AGGTTTCAAAGGGGATTAAATCTCT 58.195 36.000 0.00 0.00 0.00 3.10
2155 4737 7.248976 AGGTTTCAAAGGGGATTAAATCTCTT 58.751 34.615 0.00 0.00 0.00 2.85
2156 4738 7.179160 AGGTTTCAAAGGGGATTAAATCTCTTG 59.821 37.037 0.00 0.00 0.00 3.02
2157 4739 6.530019 TTCAAAGGGGATTAAATCTCTTGC 57.470 37.500 0.00 0.00 0.00 4.01
2158 4740 5.579047 TCAAAGGGGATTAAATCTCTTGCA 58.421 37.500 0.00 0.00 0.00 4.08
2159 4741 6.015918 TCAAAGGGGATTAAATCTCTTGCAA 58.984 36.000 0.00 0.00 0.00 4.08
2160 4742 6.153340 TCAAAGGGGATTAAATCTCTTGCAAG 59.847 38.462 20.81 20.81 0.00 4.01
2161 4743 5.198602 AGGGGATTAAATCTCTTGCAAGT 57.801 39.130 25.19 8.96 0.00 3.16
2162 4744 5.196695 AGGGGATTAAATCTCTTGCAAGTC 58.803 41.667 25.19 12.81 0.00 3.01
2163 4745 5.044550 AGGGGATTAAATCTCTTGCAAGTCT 60.045 40.000 25.19 9.08 0.00 3.24
2164 4746 6.158695 AGGGGATTAAATCTCTTGCAAGTCTA 59.841 38.462 25.19 12.62 0.00 2.59
2165 4747 6.828785 GGGGATTAAATCTCTTGCAAGTCTAA 59.171 38.462 25.19 15.59 0.00 2.10
2166 4748 7.339466 GGGGATTAAATCTCTTGCAAGTCTAAA 59.661 37.037 25.19 13.50 0.00 1.85
2167 4749 8.907885 GGGATTAAATCTCTTGCAAGTCTAAAT 58.092 33.333 25.19 16.98 0.00 1.40
2168 4750 9.943163 GGATTAAATCTCTTGCAAGTCTAAATC 57.057 33.333 25.19 22.30 0.00 2.17
2169 4751 9.943163 GATTAAATCTCTTGCAAGTCTAAATCC 57.057 33.333 25.19 6.59 0.00 3.01
2170 4752 6.765915 AAATCTCTTGCAAGTCTAAATCCC 57.234 37.500 25.19 0.00 0.00 3.85
2171 4753 4.222124 TCTCTTGCAAGTCTAAATCCCC 57.778 45.455 25.19 0.00 0.00 4.81
2172 4754 3.054361 TCTCTTGCAAGTCTAAATCCCCC 60.054 47.826 25.19 0.00 0.00 5.40
2173 4755 2.919602 TCTTGCAAGTCTAAATCCCCCT 59.080 45.455 25.19 0.00 0.00 4.79
2174 4756 3.054361 TCTTGCAAGTCTAAATCCCCCTC 60.054 47.826 25.19 0.00 0.00 4.30
2175 4757 2.274542 TGCAAGTCTAAATCCCCCTCA 58.725 47.619 0.00 0.00 0.00 3.86
2176 4758 2.647299 TGCAAGTCTAAATCCCCCTCAA 59.353 45.455 0.00 0.00 0.00 3.02
2177 4759 3.075283 TGCAAGTCTAAATCCCCCTCAAA 59.925 43.478 0.00 0.00 0.00 2.69
2178 4760 3.444034 GCAAGTCTAAATCCCCCTCAAAC 59.556 47.826 0.00 0.00 0.00 2.93
2179 4761 4.017126 CAAGTCTAAATCCCCCTCAAACC 58.983 47.826 0.00 0.00 0.00 3.27
2180 4762 3.542604 AGTCTAAATCCCCCTCAAACCT 58.457 45.455 0.00 0.00 0.00 3.50
2181 4763 3.523972 AGTCTAAATCCCCCTCAAACCTC 59.476 47.826 0.00 0.00 0.00 3.85
2182 4764 3.523972 GTCTAAATCCCCCTCAAACCTCT 59.476 47.826 0.00 0.00 0.00 3.69
2183 4765 3.780850 TCTAAATCCCCCTCAAACCTCTC 59.219 47.826 0.00 0.00 0.00 3.20
2184 4766 1.299939 AATCCCCCTCAAACCTCTCC 58.700 55.000 0.00 0.00 0.00 3.71
2185 4767 0.121197 ATCCCCCTCAAACCTCTCCA 59.879 55.000 0.00 0.00 0.00 3.86
2186 4768 0.547712 TCCCCCTCAAACCTCTCCAG 60.548 60.000 0.00 0.00 0.00 3.86
2187 4769 0.842467 CCCCCTCAAACCTCTCCAGT 60.842 60.000 0.00 0.00 0.00 4.00
2188 4770 0.615850 CCCCTCAAACCTCTCCAGTC 59.384 60.000 0.00 0.00 0.00 3.51
2189 4771 0.615850 CCCTCAAACCTCTCCAGTCC 59.384 60.000 0.00 0.00 0.00 3.85
2190 4772 0.615850 CCTCAAACCTCTCCAGTCCC 59.384 60.000 0.00 0.00 0.00 4.46
2191 4773 0.615850 CTCAAACCTCTCCAGTCCCC 59.384 60.000 0.00 0.00 0.00 4.81
2192 4774 0.193574 TCAAACCTCTCCAGTCCCCT 59.806 55.000 0.00 0.00 0.00 4.79
2193 4775 1.068121 CAAACCTCTCCAGTCCCCTT 58.932 55.000 0.00 0.00 0.00 3.95
2194 4776 1.003696 CAAACCTCTCCAGTCCCCTTC 59.996 57.143 0.00 0.00 0.00 3.46
2195 4777 0.193574 AACCTCTCCAGTCCCCTTCA 59.806 55.000 0.00 0.00 0.00 3.02
2196 4778 0.193574 ACCTCTCCAGTCCCCTTCAA 59.806 55.000 0.00 0.00 0.00 2.69
2197 4779 1.203492 ACCTCTCCAGTCCCCTTCAAT 60.203 52.381 0.00 0.00 0.00 2.57
2198 4780 1.488393 CCTCTCCAGTCCCCTTCAATC 59.512 57.143 0.00 0.00 0.00 2.67
2199 4781 1.488393 CTCTCCAGTCCCCTTCAATCC 59.512 57.143 0.00 0.00 0.00 3.01
2200 4782 0.548510 CTCCAGTCCCCTTCAATCCC 59.451 60.000 0.00 0.00 0.00 3.85
2201 4783 0.121197 TCCAGTCCCCTTCAATCCCT 59.879 55.000 0.00 0.00 0.00 4.20
2202 4784 1.002857 CCAGTCCCCTTCAATCCCTT 58.997 55.000 0.00 0.00 0.00 3.95
2203 4785 1.359130 CCAGTCCCCTTCAATCCCTTT 59.641 52.381 0.00 0.00 0.00 3.11
2204 4786 2.450476 CAGTCCCCTTCAATCCCTTTG 58.550 52.381 0.00 0.00 36.61 2.77
2205 4787 1.359130 AGTCCCCTTCAATCCCTTTGG 59.641 52.381 0.00 0.00 35.92 3.28
2206 4788 1.077169 GTCCCCTTCAATCCCTTTGGT 59.923 52.381 0.00 0.00 35.92 3.67
2207 4789 1.077005 TCCCCTTCAATCCCTTTGGTG 59.923 52.381 0.00 0.00 35.92 4.17
2208 4790 1.077005 CCCCTTCAATCCCTTTGGTGA 59.923 52.381 0.00 0.00 35.92 4.02
2209 4791 2.450476 CCCTTCAATCCCTTTGGTGAG 58.550 52.381 0.00 0.00 35.92 3.51
2210 4792 2.450476 CCTTCAATCCCTTTGGTGAGG 58.550 52.381 0.00 0.00 35.92 3.86
2220 4802 3.214328 CCTTTGGTGAGGGGATTAATCG 58.786 50.000 9.32 0.00 32.94 3.34
2221 4803 3.118038 CCTTTGGTGAGGGGATTAATCGA 60.118 47.826 9.32 0.00 32.94 3.59
2222 4804 4.523083 CTTTGGTGAGGGGATTAATCGAA 58.477 43.478 9.32 0.00 0.00 3.71
2223 4805 3.553828 TGGTGAGGGGATTAATCGAAC 57.446 47.619 9.32 2.61 0.00 3.95
2224 4806 2.841266 TGGTGAGGGGATTAATCGAACA 59.159 45.455 9.32 4.66 0.00 3.18
2225 4807 3.118408 TGGTGAGGGGATTAATCGAACAG 60.118 47.826 9.32 0.00 0.00 3.16
2226 4808 3.467803 GTGAGGGGATTAATCGAACAGG 58.532 50.000 9.32 0.00 0.00 4.00
2227 4809 2.438021 TGAGGGGATTAATCGAACAGGG 59.562 50.000 9.32 0.00 0.00 4.45
2228 4810 1.143073 AGGGGATTAATCGAACAGGGC 59.857 52.381 9.32 0.00 0.00 5.19
2229 4811 1.605753 GGGATTAATCGAACAGGGCC 58.394 55.000 9.32 0.00 0.00 5.80
2230 4812 1.143073 GGGATTAATCGAACAGGGCCT 59.857 52.381 0.00 0.00 0.00 5.19
2231 4813 2.370849 GGGATTAATCGAACAGGGCCTA 59.629 50.000 5.28 0.00 0.00 3.93
2236 4818 5.680594 TTAATCGAACAGGGCCTAAGTAA 57.319 39.130 5.28 0.00 0.00 2.24
2238 4820 3.536956 TCGAACAGGGCCTAAGTAATG 57.463 47.619 5.28 0.00 0.00 1.90
2241 4823 3.279434 GAACAGGGCCTAAGTAATGTGG 58.721 50.000 5.28 0.00 0.00 4.17
2245 4827 1.389555 GGCCTAAGTAATGTGGGCAC 58.610 55.000 0.00 0.00 44.04 5.01
2256 4838 2.203832 TGGGCACTCTGGCTGAGA 60.204 61.111 25.68 1.14 45.39 3.27
2261 4843 1.471684 GGCACTCTGGCTGAGAATTTG 59.528 52.381 25.68 14.96 45.39 2.32
2264 4846 2.746362 CACTCTGGCTGAGAATTTGGTC 59.254 50.000 25.68 0.00 45.39 4.02
2265 4847 2.290577 ACTCTGGCTGAGAATTTGGTCC 60.291 50.000 25.68 0.00 45.39 4.46
2266 4848 1.704628 TCTGGCTGAGAATTTGGTCCA 59.295 47.619 0.00 0.00 0.00 4.02
2269 4878 3.303938 TGGCTGAGAATTTGGTCCAAAA 58.696 40.909 20.76 3.42 36.90 2.44
2296 4908 9.872721 TGTGAAGATCTAGTAGTACTATATCGG 57.127 37.037 21.18 8.07 38.54 4.18
2297 4909 9.316730 GTGAAGATCTAGTAGTACTATATCGGG 57.683 40.741 21.18 7.52 38.54 5.14
2342 4957 5.290386 CACTGTAAGACGGAACTTCTCTTT 58.710 41.667 0.07 0.00 35.25 2.52
2346 4961 1.348036 AGACGGAACTTCTCTTTGGGG 59.652 52.381 0.00 0.00 27.51 4.96
2356 4971 2.265367 TCTCTTTGGGGATGTGTGCTA 58.735 47.619 0.00 0.00 0.00 3.49
2438 5058 7.894376 CAATGACTTATTGGCACTGAAAATT 57.106 32.000 0.00 0.00 41.99 1.82
2439 5059 7.956558 CAATGACTTATTGGCACTGAAAATTC 58.043 34.615 0.00 0.00 41.99 2.17
2440 5060 6.899393 TGACTTATTGGCACTGAAAATTCT 57.101 33.333 0.00 0.00 0.00 2.40
2441 5061 7.994425 TGACTTATTGGCACTGAAAATTCTA 57.006 32.000 0.00 0.00 0.00 2.10
2442 5062 7.816640 TGACTTATTGGCACTGAAAATTCTAC 58.183 34.615 0.00 0.00 0.00 2.59
2443 5063 7.665559 TGACTTATTGGCACTGAAAATTCTACT 59.334 33.333 0.00 0.00 0.00 2.57
2444 5064 8.045176 ACTTATTGGCACTGAAAATTCTACTC 57.955 34.615 0.00 0.00 0.00 2.59
2445 5065 5.904362 ATTGGCACTGAAAATTCTACTCC 57.096 39.130 0.00 0.00 0.00 3.85
2448 5068 3.942115 GGCACTGAAAATTCTACTCCCTC 59.058 47.826 0.00 0.00 0.00 4.30
2449 5069 4.323868 GGCACTGAAAATTCTACTCCCTCT 60.324 45.833 0.00 0.00 0.00 3.69
2450 5070 4.633565 GCACTGAAAATTCTACTCCCTCTG 59.366 45.833 0.00 0.00 0.00 3.35
2452 5072 5.872070 CACTGAAAATTCTACTCCCTCTGTC 59.128 44.000 0.00 0.00 0.00 3.51
2453 5073 5.046231 ACTGAAAATTCTACTCCCTCTGTCC 60.046 44.000 0.00 0.00 0.00 4.02
2454 5074 4.225267 TGAAAATTCTACTCCCTCTGTCCC 59.775 45.833 0.00 0.00 0.00 4.46
2455 5075 3.491766 AATTCTACTCCCTCTGTCCCA 57.508 47.619 0.00 0.00 0.00 4.37
2456 5076 3.715648 ATTCTACTCCCTCTGTCCCAT 57.284 47.619 0.00 0.00 0.00 4.00
2457 5077 4.834406 ATTCTACTCCCTCTGTCCCATA 57.166 45.455 0.00 0.00 0.00 2.74
2458 5078 4.620086 TTCTACTCCCTCTGTCCCATAA 57.380 45.455 0.00 0.00 0.00 1.90
2459 5079 4.834406 TCTACTCCCTCTGTCCCATAAT 57.166 45.455 0.00 0.00 0.00 1.28
2460 5080 5.942977 TCTACTCCCTCTGTCCCATAATA 57.057 43.478 0.00 0.00 0.00 0.98
2461 5081 6.485388 TCTACTCCCTCTGTCCCATAATAT 57.515 41.667 0.00 0.00 0.00 1.28
2462 5082 7.599353 TCTACTCCCTCTGTCCCATAATATA 57.401 40.000 0.00 0.00 0.00 0.86
2463 5083 8.008104 TCTACTCCCTCTGTCCCATAATATAA 57.992 38.462 0.00 0.00 0.00 0.98
2464 5084 8.116669 TCTACTCCCTCTGTCCCATAATATAAG 58.883 40.741 0.00 0.00 0.00 1.73
2465 5085 6.875469 ACTCCCTCTGTCCCATAATATAAGA 58.125 40.000 0.00 0.00 0.00 2.10
2466 5086 6.957020 ACTCCCTCTGTCCCATAATATAAGAG 59.043 42.308 0.00 0.00 0.00 2.85
2467 5087 5.721960 TCCCTCTGTCCCATAATATAAGAGC 59.278 44.000 0.00 0.00 0.00 4.09
2468 5088 5.394663 CCCTCTGTCCCATAATATAAGAGCG 60.395 48.000 0.00 0.00 0.00 5.03
2469 5089 5.186021 CCTCTGTCCCATAATATAAGAGCGT 59.814 44.000 0.00 0.00 0.00 5.07
2470 5090 6.295349 CCTCTGTCCCATAATATAAGAGCGTT 60.295 42.308 0.00 0.00 0.00 4.84
2471 5091 7.093902 CCTCTGTCCCATAATATAAGAGCGTTA 60.094 40.741 0.00 0.00 0.00 3.18
2472 5092 8.362464 TCTGTCCCATAATATAAGAGCGTTAT 57.638 34.615 0.79 0.79 0.00 1.89
2473 5093 8.812972 TCTGTCCCATAATATAAGAGCGTTATT 58.187 33.333 0.40 0.00 0.00 1.40
2474 5094 8.771920 TGTCCCATAATATAAGAGCGTTATTG 57.228 34.615 0.40 0.00 0.00 1.90
2475 5095 8.590204 TGTCCCATAATATAAGAGCGTTATTGA 58.410 33.333 0.40 0.00 0.00 2.57
2476 5096 8.870879 GTCCCATAATATAAGAGCGTTATTGAC 58.129 37.037 0.40 0.00 0.00 3.18
2477 5097 8.590204 TCCCATAATATAAGAGCGTTATTGACA 58.410 33.333 0.40 0.00 0.00 3.58
2478 5098 8.656849 CCCATAATATAAGAGCGTTATTGACAC 58.343 37.037 0.40 0.00 0.00 3.67
2479 5099 9.424319 CCATAATATAAGAGCGTTATTGACACT 57.576 33.333 0.40 0.00 0.00 3.55
2482 5102 8.503486 AATATAAGAGCGTTATTGACACTACG 57.497 34.615 0.40 0.00 37.09 3.51
2517 5137 9.827198 AAAAATGCTCTTATATTATGGGATGGA 57.173 29.630 0.00 0.00 0.00 3.41
2518 5138 9.471702 AAAATGCTCTTATATTATGGGATGGAG 57.528 33.333 0.00 0.00 0.00 3.86
2519 5139 5.994250 TGCTCTTATATTATGGGATGGAGC 58.006 41.667 0.00 0.00 42.41 4.70
2520 5140 5.053145 GCTCTTATATTATGGGATGGAGCG 58.947 45.833 0.00 0.00 35.22 5.03
2521 5141 5.163405 GCTCTTATATTATGGGATGGAGCGA 60.163 44.000 0.00 0.00 35.22 4.93
2522 5142 6.471233 TCTTATATTATGGGATGGAGCGAG 57.529 41.667 0.00 0.00 0.00 5.03
2523 5143 5.958380 TCTTATATTATGGGATGGAGCGAGT 59.042 40.000 0.00 0.00 0.00 4.18
2524 5144 7.123383 TCTTATATTATGGGATGGAGCGAGTA 58.877 38.462 0.00 0.00 0.00 2.59
2525 5145 3.963428 ATTATGGGATGGAGCGAGTAC 57.037 47.619 0.00 0.00 0.00 2.73
2526 5146 1.629043 TATGGGATGGAGCGAGTACC 58.371 55.000 0.00 0.00 0.00 3.34
2527 5147 0.398522 ATGGGATGGAGCGAGTACCA 60.399 55.000 0.00 0.00 40.57 3.25
2528 5148 0.616395 TGGGATGGAGCGAGTACCAA 60.616 55.000 0.00 0.00 39.69 3.67
2529 5149 0.759346 GGGATGGAGCGAGTACCAAT 59.241 55.000 0.00 0.00 39.69 3.16
2530 5150 1.141053 GGGATGGAGCGAGTACCAATT 59.859 52.381 0.00 0.00 39.69 2.32
2531 5151 2.213499 GGATGGAGCGAGTACCAATTG 58.787 52.381 0.00 0.00 39.69 2.32
2532 5152 2.158957 GGATGGAGCGAGTACCAATTGA 60.159 50.000 7.12 0.00 39.69 2.57
2533 5153 3.495100 GGATGGAGCGAGTACCAATTGAT 60.495 47.826 7.12 0.00 39.69 2.57
2550 5170 9.313118 ACCAATTGATTTTTCTTGACTGTAAAC 57.687 29.630 7.12 0.00 0.00 2.01
2551 5171 9.533253 CCAATTGATTTTTCTTGACTGTAAACT 57.467 29.630 7.12 0.00 0.00 2.66
2581 5201 3.255397 AGGCCAGCCTGAACTGCT 61.255 61.111 11.21 0.00 46.22 4.24
2587 5207 3.012560 AGCCTGAACTGCTGAACAC 57.987 52.632 0.00 0.00 37.76 3.32
2588 5208 0.471617 AGCCTGAACTGCTGAACACT 59.528 50.000 0.00 0.00 37.76 3.55
2589 5209 1.133976 AGCCTGAACTGCTGAACACTT 60.134 47.619 0.00 0.00 37.76 3.16
2590 5210 1.002033 GCCTGAACTGCTGAACACTTG 60.002 52.381 0.00 0.00 0.00 3.16
2591 5211 2.292267 CCTGAACTGCTGAACACTTGT 58.708 47.619 0.00 0.00 0.00 3.16
2632 5252 2.808543 CACAGAACCACAAGAGGCTAAC 59.191 50.000 0.00 0.00 0.00 2.34
2634 5254 3.901844 ACAGAACCACAAGAGGCTAACTA 59.098 43.478 0.00 0.00 0.00 2.24
2637 5259 5.940470 CAGAACCACAAGAGGCTAACTAATT 59.060 40.000 0.00 0.00 0.00 1.40
2653 5275 2.584835 AATTTGCTAGCCTGGTGTGA 57.415 45.000 13.29 0.00 0.00 3.58
2661 5283 3.637229 GCTAGCCTGGTGTGATACTTCTA 59.363 47.826 2.29 0.00 0.00 2.10
2662 5284 4.500035 GCTAGCCTGGTGTGATACTTCTAC 60.500 50.000 2.29 0.00 0.00 2.59
2688 5316 4.699257 AGAGAAAAGCCAGATGTTGATGTC 59.301 41.667 0.00 0.00 0.00 3.06
2696 5324 4.787563 GCCAGATGTTGATGTCATTAAGCG 60.788 45.833 0.00 0.00 0.00 4.68
2697 5325 4.333649 CCAGATGTTGATGTCATTAAGCGT 59.666 41.667 0.00 0.00 0.00 5.07
2704 5332 6.017852 TGTTGATGTCATTAAGCGTGTTACAA 60.018 34.615 0.00 0.00 0.00 2.41
2705 5333 6.735678 TGATGTCATTAAGCGTGTTACAAT 57.264 33.333 0.00 0.00 0.00 2.71
2720 5348 2.957491 ACAATGTGTTGTTGGTGTGG 57.043 45.000 0.00 0.00 46.07 4.17
2722 5350 0.102120 AATGTGTTGTTGGTGTGGCG 59.898 50.000 0.00 0.00 0.00 5.69
2723 5351 0.749818 ATGTGTTGTTGGTGTGGCGA 60.750 50.000 0.00 0.00 0.00 5.54
2725 5353 0.248458 GTGTTGTTGGTGTGGCGAAG 60.248 55.000 0.00 0.00 0.00 3.79
2738 5366 3.829886 TGGCGAAGTCATTTGAACATC 57.170 42.857 0.00 0.00 36.97 3.06
2739 5367 3.411446 TGGCGAAGTCATTTGAACATCT 58.589 40.909 0.00 0.00 36.97 2.90
2754 5382 5.858381 TGAACATCTATCTGATTACCCTGC 58.142 41.667 0.00 0.00 32.05 4.85
2758 5386 5.784390 ACATCTATCTGATTACCCTGCTGAT 59.216 40.000 0.00 0.00 32.05 2.90
2768 5396 0.035881 CCCTGCTGATGTGTGACTGT 59.964 55.000 0.00 0.00 0.00 3.55
2772 5400 1.151668 GCTGATGTGTGACTGTCACC 58.848 55.000 31.58 23.82 46.40 4.02
2773 5401 1.800805 CTGATGTGTGACTGTCACCC 58.199 55.000 31.58 23.85 46.40 4.61
2774 5402 1.070601 CTGATGTGTGACTGTCACCCA 59.929 52.381 31.58 28.08 46.40 4.51
2775 5403 1.488393 TGATGTGTGACTGTCACCCAA 59.512 47.619 31.58 19.98 46.40 4.12
2776 5404 2.092699 TGATGTGTGACTGTCACCCAAA 60.093 45.455 31.58 19.14 46.40 3.28
2777 5405 2.036958 TGTGTGACTGTCACCCAAAG 57.963 50.000 31.58 0.00 46.40 2.77
2778 5406 1.308998 GTGTGACTGTCACCCAAAGG 58.691 55.000 31.58 0.00 46.40 3.11
2797 5425 0.536006 GTGAGGTCCAAACAGCAGCT 60.536 55.000 0.00 0.00 0.00 4.24
2809 5437 2.396160 CAGCAGCTCTGTTTGTGTTC 57.604 50.000 0.00 0.00 38.02 3.18
2812 5440 2.615912 AGCAGCTCTGTTTGTGTTCTTC 59.384 45.455 0.00 0.00 0.00 2.87
2827 5455 9.965824 TTTGTGTTCTTCAATTTCCTTTCTATC 57.034 29.630 0.00 0.00 0.00 2.08
2835 5463 5.882557 TCAATTTCCTTTCTATCAGGTGCTC 59.117 40.000 0.00 0.00 32.59 4.26
2836 5464 5.707066 ATTTCCTTTCTATCAGGTGCTCT 57.293 39.130 0.00 0.00 32.59 4.09
2857 5485 1.742880 CAGTGTGTGCTCCATCCCG 60.743 63.158 0.00 0.00 0.00 5.14
2859 5487 1.221840 GTGTGTGCTCCATCCCGAT 59.778 57.895 0.00 0.00 0.00 4.18
2860 5488 0.392998 GTGTGTGCTCCATCCCGATT 60.393 55.000 0.00 0.00 0.00 3.34
2861 5489 0.107703 TGTGTGCTCCATCCCGATTC 60.108 55.000 0.00 0.00 0.00 2.52
2862 5490 0.815615 GTGTGCTCCATCCCGATTCC 60.816 60.000 0.00 0.00 0.00 3.01
2863 5491 1.595382 GTGCTCCATCCCGATTCCG 60.595 63.158 0.00 0.00 0.00 4.30
2864 5492 2.063979 TGCTCCATCCCGATTCCGT 61.064 57.895 0.00 0.00 0.00 4.69
2865 5493 0.757561 TGCTCCATCCCGATTCCGTA 60.758 55.000 0.00 0.00 0.00 4.02
2866 5494 0.038159 GCTCCATCCCGATTCCGTAG 60.038 60.000 0.00 0.00 0.00 3.51
2907 5535 6.349528 CCATTGTGTTTGACAGATGATGCTTA 60.350 38.462 6.14 0.00 35.44 3.09
2908 5536 5.611796 TGTGTTTGACAGATGATGCTTAC 57.388 39.130 0.00 0.00 0.00 2.34
2909 5537 5.308014 TGTGTTTGACAGATGATGCTTACT 58.692 37.500 0.00 0.00 0.00 2.24
2910 5538 5.409520 TGTGTTTGACAGATGATGCTTACTC 59.590 40.000 0.00 0.00 0.00 2.59
2920 5548 1.802960 GATGCTTACTCATGGATGCCG 59.197 52.381 0.00 0.00 0.00 5.69
2924 5552 2.423538 GCTTACTCATGGATGCCGTTTT 59.576 45.455 0.00 0.00 0.00 2.43
2935 5563 0.100861 TGCCGTTTTTCCCGTGTTTC 59.899 50.000 0.00 0.00 0.00 2.78
2946 5575 1.083015 CGTGTTTCCGGCTTCAACG 60.083 57.895 0.00 0.00 0.00 4.10
2947 5576 1.370051 GTGTTTCCGGCTTCAACGC 60.370 57.895 0.00 0.00 0.00 4.84
2986 5618 9.481340 AGTTTTGCTTATCTTTGGAAGATTTTC 57.519 29.630 8.33 0.00 45.75 2.29
2987 5619 9.481340 GTTTTGCTTATCTTTGGAAGATTTTCT 57.519 29.630 8.33 0.00 45.75 2.52
2988 5620 9.480053 TTTTGCTTATCTTTGGAAGATTTTCTG 57.520 29.630 8.33 0.00 45.75 3.02
2994 5626 9.965824 TTATCTTTGGAAGATTTTCTGTGTTTC 57.034 29.630 8.33 0.00 45.75 2.78
2995 5627 7.403312 TCTTTGGAAGATTTTCTGTGTTTCA 57.597 32.000 0.00 0.00 33.68 2.69
2996 5628 8.010733 TCTTTGGAAGATTTTCTGTGTTTCAT 57.989 30.769 0.00 0.00 33.68 2.57
2997 5629 7.922278 TCTTTGGAAGATTTTCTGTGTTTCATG 59.078 33.333 0.00 0.00 33.68 3.07
2999 5631 7.111247 TGGAAGATTTTCTGTGTTTCATGTT 57.889 32.000 0.00 0.00 33.68 2.71
3000 5632 7.555087 TGGAAGATTTTCTGTGTTTCATGTTT 58.445 30.769 0.00 0.00 33.68 2.83
3001 5633 7.492020 TGGAAGATTTTCTGTGTTTCATGTTTG 59.508 33.333 0.00 0.00 33.68 2.93
3002 5634 6.833342 AGATTTTCTGTGTTTCATGTTTGC 57.167 33.333 0.00 0.00 0.00 3.68
3003 5635 6.339730 AGATTTTCTGTGTTTCATGTTTGCA 58.660 32.000 0.00 0.00 0.00 4.08
3014 5646 3.519579 TCATGTTTGCACTTGGTGTTTG 58.480 40.909 0.00 0.00 35.75 2.93
3015 5647 1.719600 TGTTTGCACTTGGTGTTTGC 58.280 45.000 0.00 0.00 35.75 3.68
3023 5655 2.348605 CTTGGTGTTTGCCGGTGTGG 62.349 60.000 1.90 0.00 42.50 4.17
3029 5661 0.818040 GTTTGCCGGTGTGGTTCTCT 60.818 55.000 1.90 0.00 41.21 3.10
3036 5668 2.404215 CGGTGTGGTTCTCTAGTGTTG 58.596 52.381 0.00 0.00 0.00 3.33
3037 5669 2.223971 CGGTGTGGTTCTCTAGTGTTGT 60.224 50.000 0.00 0.00 0.00 3.32
3045 5677 5.815740 TGGTTCTCTAGTGTTGTTGTTCTTC 59.184 40.000 0.00 0.00 0.00 2.87
3046 5678 6.049790 GGTTCTCTAGTGTTGTTGTTCTTCT 58.950 40.000 0.00 0.00 0.00 2.85
3047 5679 6.539103 GGTTCTCTAGTGTTGTTGTTCTTCTT 59.461 38.462 0.00 0.00 0.00 2.52
3048 5680 7.254488 GGTTCTCTAGTGTTGTTGTTCTTCTTC 60.254 40.741 0.00 0.00 0.00 2.87
3060 5692 6.206634 TGTTGTTCTTCTTCGCCTGAATAAAT 59.793 34.615 0.00 0.00 32.61 1.40
3061 5693 6.182039 TGTTCTTCTTCGCCTGAATAAATG 57.818 37.500 0.00 0.00 32.61 2.32
3062 5694 5.123820 TGTTCTTCTTCGCCTGAATAAATGG 59.876 40.000 0.00 0.00 32.61 3.16
3065 5697 2.023673 CTTCGCCTGAATAAATGGGCA 58.976 47.619 0.00 0.00 44.27 5.36
3066 5698 2.363306 TCGCCTGAATAAATGGGCAT 57.637 45.000 0.00 0.00 44.27 4.40
3067 5699 2.229792 TCGCCTGAATAAATGGGCATC 58.770 47.619 0.00 0.00 44.27 3.91
3068 5700 1.270550 CGCCTGAATAAATGGGCATCC 59.729 52.381 0.00 0.00 44.27 3.51
3069 5701 1.270550 GCCTGAATAAATGGGCATCCG 59.729 52.381 0.00 0.00 43.59 4.18
3074 5707 3.820467 TGAATAAATGGGCATCCGATGTC 59.180 43.478 10.10 7.35 35.24 3.06
3077 5710 0.820891 AATGGGCATCCGATGTCTGC 60.821 55.000 12.62 0.00 34.67 4.26
3090 5723 5.105513 TCCGATGTCTGCATGTTTCTTACTA 60.106 40.000 0.00 0.00 35.07 1.82
3091 5724 5.755375 CCGATGTCTGCATGTTTCTTACTAT 59.245 40.000 0.00 0.00 35.07 2.12
3092 5725 6.074088 CCGATGTCTGCATGTTTCTTACTATC 60.074 42.308 0.00 0.00 35.07 2.08
3093 5726 6.476706 CGATGTCTGCATGTTTCTTACTATCA 59.523 38.462 0.00 0.00 35.07 2.15
3094 5727 7.010460 CGATGTCTGCATGTTTCTTACTATCAA 59.990 37.037 0.00 0.00 35.07 2.57
3095 5728 8.743085 ATGTCTGCATGTTTCTTACTATCAAT 57.257 30.769 0.00 0.00 33.37 2.57
3096 5729 8.565896 TGTCTGCATGTTTCTTACTATCAATT 57.434 30.769 0.00 0.00 0.00 2.32
3097 5730 9.665719 TGTCTGCATGTTTCTTACTATCAATTA 57.334 29.630 0.00 0.00 0.00 1.40
3098 5731 9.922305 GTCTGCATGTTTCTTACTATCAATTAC 57.078 33.333 0.00 0.00 0.00 1.89
3099 5732 9.665719 TCTGCATGTTTCTTACTATCAATTACA 57.334 29.630 0.00 0.00 0.00 2.41
3100 5733 9.926751 CTGCATGTTTCTTACTATCAATTACAG 57.073 33.333 0.00 0.00 0.00 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
150 154 2.065906 CTTCTAGCGGACGGAGGAGC 62.066 65.000 0.00 0.00 0.00 4.70
165 169 2.676748 CAGATACCTGGAGGCTCTTCT 58.323 52.381 15.23 4.90 39.32 2.85
174 178 1.289231 AGGTCAGAGCAGATACCTGGA 59.711 52.381 0.00 0.00 40.83 3.86
180 184 1.050988 GGGGCAGGTCAGAGCAGATA 61.051 60.000 1.66 0.00 0.00 1.98
181 185 2.373707 GGGGCAGGTCAGAGCAGAT 61.374 63.158 1.66 0.00 0.00 2.90
199 203 3.254166 AGCAATAAACACAAGCACCTGAG 59.746 43.478 0.00 0.00 0.00 3.35
200 204 3.004629 CAGCAATAAACACAAGCACCTGA 59.995 43.478 0.00 0.00 0.00 3.86
264 275 2.440946 CCAGTGAGTGGTCAGGTGA 58.559 57.895 0.00 0.00 42.17 4.02
334 362 4.409187 TGCATATCATAGTACCCCGTACA 58.591 43.478 4.86 0.00 41.03 2.90
364 398 4.180057 GCATATCATAGTGCTGCTAGTCC 58.820 47.826 0.00 0.00 38.30 3.85
374 408 6.422223 GTCGGTTTTCTTGCATATCATAGTG 58.578 40.000 0.00 0.00 0.00 2.74
397 432 2.148768 GGAAAAACCTGTCGAATCGGT 58.851 47.619 1.76 0.00 35.41 4.69
418 458 2.435938 CATCCCACCACCGAACCG 60.436 66.667 0.00 0.00 0.00 4.44
422 462 1.074072 CAAACCATCCCACCACCGA 59.926 57.895 0.00 0.00 0.00 4.69
447 487 2.434774 ACCCTGGCGGTTTCTTCC 59.565 61.111 0.00 0.00 45.36 3.46
469 509 1.994507 CTGTACTCGGCTCTCACCCG 61.995 65.000 0.00 0.00 46.88 5.28
470 510 1.668101 CCTGTACTCGGCTCTCACCC 61.668 65.000 0.00 0.00 0.00 4.61
471 511 0.966370 ACCTGTACTCGGCTCTCACC 60.966 60.000 0.00 0.00 0.00 4.02
472 512 0.889306 AACCTGTACTCGGCTCTCAC 59.111 55.000 0.00 0.00 0.00 3.51
473 513 1.629043 AAACCTGTACTCGGCTCTCA 58.371 50.000 0.00 0.00 0.00 3.27
474 514 2.745515 AAAACCTGTACTCGGCTCTC 57.254 50.000 0.00 0.00 0.00 3.20
475 515 2.633481 AGAAAAACCTGTACTCGGCTCT 59.367 45.455 0.00 0.00 0.00 4.09
476 516 3.041508 AGAAAAACCTGTACTCGGCTC 57.958 47.619 0.00 0.00 0.00 4.70
477 517 4.313282 GTTAGAAAAACCTGTACTCGGCT 58.687 43.478 0.00 0.00 0.00 5.52
478 518 3.434641 GGTTAGAAAAACCTGTACTCGGC 59.565 47.826 0.00 0.00 37.34 5.54
479 519 4.450080 GTGGTTAGAAAAACCTGTACTCGG 59.550 45.833 8.29 0.00 40.88 4.63
480 520 4.450080 GGTGGTTAGAAAAACCTGTACTCG 59.550 45.833 8.29 0.00 40.88 4.18
481 521 5.618236 AGGTGGTTAGAAAAACCTGTACTC 58.382 41.667 8.29 0.00 41.52 2.59
482 522 5.641789 AGGTGGTTAGAAAAACCTGTACT 57.358 39.130 8.29 0.00 41.52 2.73
483 523 6.648310 GTCTAGGTGGTTAGAAAAACCTGTAC 59.352 42.308 8.29 0.00 42.96 2.90
484 524 6.556116 AGTCTAGGTGGTTAGAAAAACCTGTA 59.444 38.462 8.29 0.00 42.96 2.74
485 525 5.368816 AGTCTAGGTGGTTAGAAAAACCTGT 59.631 40.000 8.29 0.00 42.96 4.00
486 526 5.866207 AGTCTAGGTGGTTAGAAAAACCTG 58.134 41.667 8.29 0.00 42.96 4.00
487 527 6.294955 CGTAGTCTAGGTGGTTAGAAAAACCT 60.295 42.308 8.29 0.00 45.06 3.50
488 528 5.866092 CGTAGTCTAGGTGGTTAGAAAAACC 59.134 44.000 0.00 0.00 40.67 3.27
489 529 6.584184 GTCGTAGTCTAGGTGGTTAGAAAAAC 59.416 42.308 0.00 0.00 31.80 2.43
490 530 6.568462 CGTCGTAGTCTAGGTGGTTAGAAAAA 60.568 42.308 0.00 0.00 31.80 1.94
491 531 5.106555 CGTCGTAGTCTAGGTGGTTAGAAAA 60.107 44.000 0.00 0.00 31.80 2.29
492 532 4.393062 CGTCGTAGTCTAGGTGGTTAGAAA 59.607 45.833 0.00 0.00 31.80 2.52
493 533 3.935203 CGTCGTAGTCTAGGTGGTTAGAA 59.065 47.826 0.00 0.00 31.80 2.10
494 534 3.525537 CGTCGTAGTCTAGGTGGTTAGA 58.474 50.000 0.00 0.00 0.00 2.10
495 535 2.611292 CCGTCGTAGTCTAGGTGGTTAG 59.389 54.545 0.00 0.00 0.00 2.34
496 536 2.236146 TCCGTCGTAGTCTAGGTGGTTA 59.764 50.000 10.99 0.00 0.00 2.85
497 537 1.003580 TCCGTCGTAGTCTAGGTGGTT 59.996 52.381 10.99 0.00 0.00 3.67
498 538 0.615331 TCCGTCGTAGTCTAGGTGGT 59.385 55.000 10.99 0.00 0.00 4.16
499 539 1.872313 GATCCGTCGTAGTCTAGGTGG 59.128 57.143 0.00 4.02 0.00 4.61
500 540 1.526041 CGATCCGTCGTAGTCTAGGTG 59.474 57.143 0.00 0.00 42.78 4.00
501 541 1.863267 CGATCCGTCGTAGTCTAGGT 58.137 55.000 0.00 0.00 42.78 3.08
512 552 1.393539 CAAACATCACCACGATCCGTC 59.606 52.381 0.00 0.00 38.32 4.79
513 553 1.438651 CAAACATCACCACGATCCGT 58.561 50.000 0.00 0.00 42.36 4.69
514 554 0.096976 GCAAACATCACCACGATCCG 59.903 55.000 0.00 0.00 29.21 4.18
515 555 1.453155 AGCAAACATCACCACGATCC 58.547 50.000 0.00 0.00 29.21 3.36
516 556 3.559238 AAAGCAAACATCACCACGATC 57.441 42.857 0.00 0.00 29.21 3.69
517 557 4.699735 TCATAAAGCAAACATCACCACGAT 59.300 37.500 0.00 0.00 33.27 3.73
518 558 4.068599 TCATAAAGCAAACATCACCACGA 58.931 39.130 0.00 0.00 0.00 4.35
519 559 4.418013 TCATAAAGCAAACATCACCACG 57.582 40.909 0.00 0.00 0.00 4.94
533 573 4.331968 TGCCCCCGCTTTATATCATAAAG 58.668 43.478 12.33 12.33 37.53 1.85
534 574 4.374689 TGCCCCCGCTTTATATCATAAA 57.625 40.909 0.00 0.00 35.36 1.40
535 575 4.076394 GTTGCCCCCGCTTTATATCATAA 58.924 43.478 0.00 0.00 35.36 1.90
536 576 3.560453 GGTTGCCCCCGCTTTATATCATA 60.560 47.826 0.00 0.00 35.36 2.15
537 577 2.514803 GTTGCCCCCGCTTTATATCAT 58.485 47.619 0.00 0.00 35.36 2.45
538 578 1.477923 GGTTGCCCCCGCTTTATATCA 60.478 52.381 0.00 0.00 35.36 2.15
539 579 1.244816 GGTTGCCCCCGCTTTATATC 58.755 55.000 0.00 0.00 35.36 1.63
540 580 0.178973 GGGTTGCCCCCGCTTTATAT 60.179 55.000 0.00 0.00 45.80 0.86
541 581 1.227946 GGGTTGCCCCCGCTTTATA 59.772 57.895 0.00 0.00 45.80 0.98
542 582 2.043349 GGGTTGCCCCCGCTTTAT 60.043 61.111 0.00 0.00 45.80 1.40
551 591 1.330234 TAACCGAAAAAGGGTTGCCC 58.670 50.000 6.47 0.00 46.81 5.36
552 592 3.125316 GTTTAACCGAAAAAGGGTTGCC 58.875 45.455 6.47 0.00 46.81 4.52
553 593 3.125316 GGTTTAACCGAAAAAGGGTTGC 58.875 45.455 0.00 0.00 46.81 4.17
617 657 7.148738 CGCGTGCAGATCATAGATTAAATAACT 60.149 37.037 0.00 0.00 0.00 2.24
641 681 7.023575 CCATTGTTAGGCTATTTTATCATCGC 58.976 38.462 0.00 0.00 0.00 4.58
674 714 3.137544 ACACTTGGTACCAGTGATTTCCA 59.862 43.478 32.98 12.49 37.31 3.53
675 715 3.751518 ACACTTGGTACCAGTGATTTCC 58.248 45.455 32.98 2.32 37.31 3.13
676 716 5.767816 AAACACTTGGTACCAGTGATTTC 57.232 39.130 32.98 2.99 37.31 2.17
677 717 5.681179 GCAAAACACTTGGTACCAGTGATTT 60.681 40.000 32.98 30.08 38.46 2.17
752 793 8.027771 AGACGTAACCTAAGAAAGTAAGTCATG 58.972 37.037 0.00 0.00 0.00 3.07
770 811 7.460507 GCAACAAACAGTTAAAACAGACGTAAC 60.461 37.037 0.00 0.00 38.74 2.50
774 815 5.092781 AGCAACAAACAGTTAAAACAGACG 58.907 37.500 0.00 0.00 38.74 4.18
841 883 5.163581 GCAATCTGCCTCAACACATAATTCT 60.164 40.000 0.00 0.00 37.42 2.40
890 932 1.984026 CAGCCCCAACCAATCCACC 60.984 63.158 0.00 0.00 0.00 4.61
1001 1044 0.250252 TGCGGTCACTTGAATGCTCA 60.250 50.000 5.77 0.00 0.00 4.26
1011 1054 0.398696 TTATGGGTGTTGCGGTCACT 59.601 50.000 5.89 0.00 36.25 3.41
1014 1057 1.467342 GAAGTTATGGGTGTTGCGGTC 59.533 52.381 0.00 0.00 0.00 4.79
1017 1060 0.446222 CGGAAGTTATGGGTGTTGCG 59.554 55.000 0.00 0.00 0.00 4.85
1037 1080 0.037975 GAAGTTGTTGGCCATGGCAG 60.038 55.000 36.56 0.31 44.11 4.85
1057 1100 4.911514 TGGGTTTGTTAACTGAAGAAGC 57.088 40.909 7.22 4.09 34.59 3.86
1074 1117 0.338814 AGGAGGTCTCGGTAATGGGT 59.661 55.000 0.00 0.00 0.00 4.51
1168 1211 1.453155 CTAATGAACTTGCCCGCACT 58.547 50.000 0.00 0.00 0.00 4.40
1173 1216 1.936547 CTCGAGCTAATGAACTTGCCC 59.063 52.381 0.00 0.00 0.00 5.36
1372 1424 4.901868 ACTGGCTTAAAGGTTAATGTCGA 58.098 39.130 0.00 0.00 0.00 4.20
1379 1431 3.911894 ACCACCTACTGGCTTAAAGGTTA 59.088 43.478 0.00 0.00 45.32 2.85
1416 1558 7.588497 AAGCTTGGAGTTCTCAATAAACTTT 57.412 32.000 0.00 0.00 37.10 2.66
1779 1924 2.038952 ACAGTTGCTTGGCAGAGTATCA 59.961 45.455 0.00 0.00 40.61 2.15
2081 4663 2.741486 TTAAGGTGGGGCGACTGTGC 62.741 60.000 0.00 0.00 0.00 4.57
2084 4666 1.078426 CCTTAAGGTGGGGCGACTG 60.078 63.158 13.83 0.00 0.00 3.51
2099 4681 0.608308 GCCTAACCGAACAAGCCCTT 60.608 55.000 0.00 0.00 0.00 3.95
2100 4682 1.002502 GCCTAACCGAACAAGCCCT 60.003 57.895 0.00 0.00 0.00 5.19
2101 4683 2.396157 CGCCTAACCGAACAAGCCC 61.396 63.158 0.00 0.00 0.00 5.19
2102 4684 2.396157 CCGCCTAACCGAACAAGCC 61.396 63.158 0.00 0.00 0.00 4.35
2103 4685 2.396157 CCCGCCTAACCGAACAAGC 61.396 63.158 0.00 0.00 0.00 4.01
2104 4686 1.743995 CCCCGCCTAACCGAACAAG 60.744 63.158 0.00 0.00 0.00 3.16
2105 4687 2.054473 AACCCCGCCTAACCGAACAA 62.054 55.000 0.00 0.00 0.00 2.83
2106 4688 2.054473 AAACCCCGCCTAACCGAACA 62.054 55.000 0.00 0.00 0.00 3.18
2107 4689 1.302752 AAACCCCGCCTAACCGAAC 60.303 57.895 0.00 0.00 0.00 3.95
2108 4690 1.302671 CAAACCCCGCCTAACCGAA 60.303 57.895 0.00 0.00 0.00 4.30
2109 4691 1.766625 TTCAAACCCCGCCTAACCGA 61.767 55.000 0.00 0.00 0.00 4.69
2110 4692 1.302671 TTCAAACCCCGCCTAACCG 60.303 57.895 0.00 0.00 0.00 4.44
2111 4693 0.037160 TCTTCAAACCCCGCCTAACC 59.963 55.000 0.00 0.00 0.00 2.85
2112 4694 1.450025 CTCTTCAAACCCCGCCTAAC 58.550 55.000 0.00 0.00 0.00 2.34
2113 4695 0.326927 CCTCTTCAAACCCCGCCTAA 59.673 55.000 0.00 0.00 0.00 2.69
2114 4696 0.838987 ACCTCTTCAAACCCCGCCTA 60.839 55.000 0.00 0.00 0.00 3.93
2115 4697 1.716028 AACCTCTTCAAACCCCGCCT 61.716 55.000 0.00 0.00 0.00 5.52
2116 4698 0.826256 AAACCTCTTCAAACCCCGCC 60.826 55.000 0.00 0.00 0.00 6.13
2117 4699 0.596577 GAAACCTCTTCAAACCCCGC 59.403 55.000 0.00 0.00 0.00 6.13
2118 4700 1.975660 TGAAACCTCTTCAAACCCCG 58.024 50.000 0.00 0.00 0.00 5.73
2119 4701 3.069586 CCTTTGAAACCTCTTCAAACCCC 59.930 47.826 8.24 0.00 41.74 4.95
2120 4702 3.069586 CCCTTTGAAACCTCTTCAAACCC 59.930 47.826 8.24 0.00 41.74 4.11
2121 4703 3.069586 CCCCTTTGAAACCTCTTCAAACC 59.930 47.826 8.24 0.00 41.74 3.27
2122 4704 3.958147 TCCCCTTTGAAACCTCTTCAAAC 59.042 43.478 8.24 0.00 41.74 2.93
2123 4705 4.258457 TCCCCTTTGAAACCTCTTCAAA 57.742 40.909 11.10 11.10 43.62 2.69
2124 4706 3.963476 TCCCCTTTGAAACCTCTTCAA 57.037 42.857 0.00 0.00 36.71 2.69
2125 4707 4.469469 AATCCCCTTTGAAACCTCTTCA 57.531 40.909 0.00 0.00 0.00 3.02
2126 4708 6.911250 TTTAATCCCCTTTGAAACCTCTTC 57.089 37.500 0.00 0.00 0.00 2.87
2127 4709 7.248976 AGATTTAATCCCCTTTGAAACCTCTT 58.751 34.615 0.78 0.00 0.00 2.85
2128 4710 6.805150 AGATTTAATCCCCTTTGAAACCTCT 58.195 36.000 0.78 0.00 0.00 3.69
2129 4711 6.892456 AGAGATTTAATCCCCTTTGAAACCTC 59.108 38.462 0.78 0.00 0.00 3.85
2130 4712 6.805150 AGAGATTTAATCCCCTTTGAAACCT 58.195 36.000 0.78 0.00 0.00 3.50
2131 4713 7.323420 CAAGAGATTTAATCCCCTTTGAAACC 58.677 38.462 0.78 0.00 0.00 3.27
2132 4714 6.813649 GCAAGAGATTTAATCCCCTTTGAAAC 59.186 38.462 0.78 0.00 0.00 2.78
2133 4715 6.496565 TGCAAGAGATTTAATCCCCTTTGAAA 59.503 34.615 0.78 0.00 0.00 2.69
2134 4716 6.015918 TGCAAGAGATTTAATCCCCTTTGAA 58.984 36.000 0.78 0.00 0.00 2.69
2135 4717 5.579047 TGCAAGAGATTTAATCCCCTTTGA 58.421 37.500 0.78 0.00 0.00 2.69
2136 4718 5.920193 TGCAAGAGATTTAATCCCCTTTG 57.080 39.130 0.78 3.36 0.00 2.77
2137 4719 6.019108 ACTTGCAAGAGATTTAATCCCCTTT 58.981 36.000 32.50 0.70 0.00 3.11
2138 4720 5.583932 ACTTGCAAGAGATTTAATCCCCTT 58.416 37.500 32.50 1.12 0.00 3.95
2139 4721 5.044550 AGACTTGCAAGAGATTTAATCCCCT 60.045 40.000 32.50 4.73 0.00 4.79
2140 4722 5.196695 AGACTTGCAAGAGATTTAATCCCC 58.803 41.667 32.50 5.26 0.00 4.81
2141 4723 7.865706 TTAGACTTGCAAGAGATTTAATCCC 57.134 36.000 32.50 6.53 0.00 3.85
2142 4724 9.943163 GATTTAGACTTGCAAGAGATTTAATCC 57.057 33.333 32.50 12.52 0.00 3.01
2143 4725 9.943163 GGATTTAGACTTGCAAGAGATTTAATC 57.057 33.333 32.50 25.25 0.00 1.75
2144 4726 8.907885 GGGATTTAGACTTGCAAGAGATTTAAT 58.092 33.333 32.50 20.30 0.00 1.40
2145 4727 7.339466 GGGGATTTAGACTTGCAAGAGATTTAA 59.661 37.037 32.50 17.61 0.00 1.52
2146 4728 6.828785 GGGGATTTAGACTTGCAAGAGATTTA 59.171 38.462 32.50 12.91 0.00 1.40
2147 4729 5.654209 GGGGATTTAGACTTGCAAGAGATTT 59.346 40.000 32.50 10.03 0.00 2.17
2148 4730 5.196695 GGGGATTTAGACTTGCAAGAGATT 58.803 41.667 32.50 10.45 0.00 2.40
2149 4731 4.385754 GGGGGATTTAGACTTGCAAGAGAT 60.386 45.833 32.50 18.54 0.00 2.75
2150 4732 3.054361 GGGGGATTTAGACTTGCAAGAGA 60.054 47.826 32.50 13.84 0.00 3.10
2151 4733 3.054065 AGGGGGATTTAGACTTGCAAGAG 60.054 47.826 32.50 8.87 0.00 2.85
2152 4734 2.919602 AGGGGGATTTAGACTTGCAAGA 59.080 45.455 32.50 10.47 0.00 3.02
2153 4735 3.282885 GAGGGGGATTTAGACTTGCAAG 58.717 50.000 24.84 24.84 0.00 4.01
2154 4736 2.647299 TGAGGGGGATTTAGACTTGCAA 59.353 45.455 0.00 0.00 0.00 4.08
2155 4737 2.274542 TGAGGGGGATTTAGACTTGCA 58.725 47.619 0.00 0.00 0.00 4.08
2156 4738 3.366052 TTGAGGGGGATTTAGACTTGC 57.634 47.619 0.00 0.00 0.00 4.01
2157 4739 4.017126 GGTTTGAGGGGGATTTAGACTTG 58.983 47.826 0.00 0.00 0.00 3.16
2158 4740 3.923425 AGGTTTGAGGGGGATTTAGACTT 59.077 43.478 0.00 0.00 0.00 3.01
2159 4741 3.523972 GAGGTTTGAGGGGGATTTAGACT 59.476 47.826 0.00 0.00 0.00 3.24
2160 4742 3.523972 AGAGGTTTGAGGGGGATTTAGAC 59.476 47.826 0.00 0.00 0.00 2.59
2161 4743 3.780850 GAGAGGTTTGAGGGGGATTTAGA 59.219 47.826 0.00 0.00 0.00 2.10
2162 4744 3.117851 GGAGAGGTTTGAGGGGGATTTAG 60.118 52.174 0.00 0.00 0.00 1.85
2163 4745 2.850568 GGAGAGGTTTGAGGGGGATTTA 59.149 50.000 0.00 0.00 0.00 1.40
2164 4746 1.641192 GGAGAGGTTTGAGGGGGATTT 59.359 52.381 0.00 0.00 0.00 2.17
2165 4747 1.299939 GGAGAGGTTTGAGGGGGATT 58.700 55.000 0.00 0.00 0.00 3.01
2166 4748 0.121197 TGGAGAGGTTTGAGGGGGAT 59.879 55.000 0.00 0.00 0.00 3.85
2167 4749 0.547712 CTGGAGAGGTTTGAGGGGGA 60.548 60.000 0.00 0.00 0.00 4.81
2168 4750 0.842467 ACTGGAGAGGTTTGAGGGGG 60.842 60.000 0.00 0.00 0.00 5.40
2169 4751 0.615850 GACTGGAGAGGTTTGAGGGG 59.384 60.000 0.00 0.00 0.00 4.79
2170 4752 0.615850 GGACTGGAGAGGTTTGAGGG 59.384 60.000 0.00 0.00 0.00 4.30
2171 4753 0.615850 GGGACTGGAGAGGTTTGAGG 59.384 60.000 0.00 0.00 0.00 3.86
2172 4754 0.615850 GGGGACTGGAGAGGTTTGAG 59.384 60.000 0.00 0.00 0.00 3.02
2173 4755 0.193574 AGGGGACTGGAGAGGTTTGA 59.806 55.000 0.00 0.00 41.13 2.69
2174 4756 1.003696 GAAGGGGACTGGAGAGGTTTG 59.996 57.143 0.00 0.00 42.68 2.93
2175 4757 1.363246 GAAGGGGACTGGAGAGGTTT 58.637 55.000 0.00 0.00 42.68 3.27
2176 4758 0.193574 TGAAGGGGACTGGAGAGGTT 59.806 55.000 0.00 0.00 42.68 3.50
2177 4759 0.193574 TTGAAGGGGACTGGAGAGGT 59.806 55.000 0.00 0.00 42.68 3.85
2178 4760 1.488393 GATTGAAGGGGACTGGAGAGG 59.512 57.143 0.00 0.00 42.68 3.69
2179 4761 1.488393 GGATTGAAGGGGACTGGAGAG 59.512 57.143 0.00 0.00 42.68 3.20
2180 4762 1.584724 GGATTGAAGGGGACTGGAGA 58.415 55.000 0.00 0.00 42.68 3.71
2181 4763 0.548510 GGGATTGAAGGGGACTGGAG 59.451 60.000 0.00 0.00 42.68 3.86
2182 4764 0.121197 AGGGATTGAAGGGGACTGGA 59.879 55.000 0.00 0.00 42.68 3.86
2183 4765 1.002857 AAGGGATTGAAGGGGACTGG 58.997 55.000 0.00 0.00 42.68 4.00
2184 4766 2.450476 CAAAGGGATTGAAGGGGACTG 58.550 52.381 0.00 0.00 42.68 3.51
2185 4767 1.359130 CCAAAGGGATTGAAGGGGACT 59.641 52.381 0.00 0.00 41.85 3.85
2186 4768 1.077169 ACCAAAGGGATTGAAGGGGAC 59.923 52.381 0.00 0.00 41.85 4.46
2187 4769 1.077005 CACCAAAGGGATTGAAGGGGA 59.923 52.381 0.00 0.00 41.85 4.81
2188 4770 1.077005 TCACCAAAGGGATTGAAGGGG 59.923 52.381 0.00 0.00 41.85 4.79
2189 4771 2.450476 CTCACCAAAGGGATTGAAGGG 58.550 52.381 0.00 0.00 41.85 3.95
2190 4772 2.450476 CCTCACCAAAGGGATTGAAGG 58.550 52.381 0.00 0.00 41.85 3.46
2199 4781 3.118038 TCGATTAATCCCCTCACCAAAGG 60.118 47.826 9.87 0.00 36.08 3.11
2200 4782 4.150897 TCGATTAATCCCCTCACCAAAG 57.849 45.455 9.87 0.00 0.00 2.77
2201 4783 4.263550 TGTTCGATTAATCCCCTCACCAAA 60.264 41.667 9.87 0.00 0.00 3.28
2202 4784 3.264706 TGTTCGATTAATCCCCTCACCAA 59.735 43.478 9.87 0.00 0.00 3.67
2203 4785 2.841266 TGTTCGATTAATCCCCTCACCA 59.159 45.455 9.87 0.00 0.00 4.17
2204 4786 3.467803 CTGTTCGATTAATCCCCTCACC 58.532 50.000 9.87 0.00 0.00 4.02
2205 4787 3.467803 CCTGTTCGATTAATCCCCTCAC 58.532 50.000 9.87 1.03 0.00 3.51
2206 4788 2.438021 CCCTGTTCGATTAATCCCCTCA 59.562 50.000 9.87 4.06 0.00 3.86
2207 4789 2.810767 GCCCTGTTCGATTAATCCCCTC 60.811 54.545 9.87 0.00 0.00 4.30
2208 4790 1.143073 GCCCTGTTCGATTAATCCCCT 59.857 52.381 9.87 0.00 0.00 4.79
2209 4791 1.605753 GCCCTGTTCGATTAATCCCC 58.394 55.000 9.87 0.00 0.00 4.81
2210 4792 1.143073 AGGCCCTGTTCGATTAATCCC 59.857 52.381 9.87 2.83 0.00 3.85
2211 4793 2.640316 AGGCCCTGTTCGATTAATCC 57.360 50.000 9.87 0.00 0.00 3.01
2212 4794 4.704965 ACTTAGGCCCTGTTCGATTAATC 58.295 43.478 0.00 5.30 0.00 1.75
2213 4795 4.772886 ACTTAGGCCCTGTTCGATTAAT 57.227 40.909 0.00 0.00 0.00 1.40
2214 4796 5.680594 TTACTTAGGCCCTGTTCGATTAA 57.319 39.130 0.00 0.00 0.00 1.40
2215 4797 5.129815 ACATTACTTAGGCCCTGTTCGATTA 59.870 40.000 0.00 0.00 0.00 1.75
2216 4798 4.080526 ACATTACTTAGGCCCTGTTCGATT 60.081 41.667 0.00 0.00 0.00 3.34
2217 4799 3.454812 ACATTACTTAGGCCCTGTTCGAT 59.545 43.478 0.00 0.00 0.00 3.59
2218 4800 2.835764 ACATTACTTAGGCCCTGTTCGA 59.164 45.455 0.00 0.00 0.00 3.71
2219 4801 2.936498 CACATTACTTAGGCCCTGTTCG 59.064 50.000 0.00 0.00 0.00 3.95
2220 4802 3.279434 CCACATTACTTAGGCCCTGTTC 58.721 50.000 0.00 0.00 0.00 3.18
2221 4803 2.025321 CCCACATTACTTAGGCCCTGTT 60.025 50.000 0.00 0.00 0.00 3.16
2222 4804 1.564348 CCCACATTACTTAGGCCCTGT 59.436 52.381 0.00 0.00 0.00 4.00
2223 4805 1.750682 GCCCACATTACTTAGGCCCTG 60.751 57.143 0.00 0.00 37.66 4.45
2224 4806 0.551396 GCCCACATTACTTAGGCCCT 59.449 55.000 0.00 0.00 37.66 5.19
2225 4807 0.257616 TGCCCACATTACTTAGGCCC 59.742 55.000 0.00 0.00 43.18 5.80
2226 4808 1.064685 AGTGCCCACATTACTTAGGCC 60.065 52.381 0.00 0.00 43.18 5.19
2227 4809 2.092914 AGAGTGCCCACATTACTTAGGC 60.093 50.000 0.82 0.00 44.13 3.93
2228 4810 3.535561 CAGAGTGCCCACATTACTTAGG 58.464 50.000 0.82 0.00 0.00 2.69
2229 4811 3.535561 CCAGAGTGCCCACATTACTTAG 58.464 50.000 0.82 0.00 0.00 2.18
2230 4812 2.355716 GCCAGAGTGCCCACATTACTTA 60.356 50.000 0.82 0.00 0.00 2.24
2231 4813 1.614317 GCCAGAGTGCCCACATTACTT 60.614 52.381 0.82 0.00 0.00 2.24
2236 4818 2.194388 CTCAGCCAGAGTGCCCACAT 62.194 60.000 0.82 0.00 39.62 3.21
2238 4820 2.046507 CTCAGCCAGAGTGCCCAC 60.047 66.667 0.00 0.00 39.62 4.61
2241 4823 1.471684 CAAATTCTCAGCCAGAGTGCC 59.528 52.381 3.95 0.00 44.98 5.01
2245 4827 2.290514 TGGACCAAATTCTCAGCCAGAG 60.291 50.000 0.00 0.00 46.14 3.35
2256 4838 7.307131 AGATCTTCACATTTTGGACCAAATT 57.693 32.000 20.22 13.88 33.19 1.82
2261 4843 7.331791 ACTACTAGATCTTCACATTTTGGACC 58.668 38.462 0.00 0.00 0.00 4.46
2342 4957 0.255604 CCACATAGCACACATCCCCA 59.744 55.000 0.00 0.00 0.00 4.96
2346 4961 2.932614 GTCAGACCACATAGCACACATC 59.067 50.000 0.00 0.00 0.00 3.06
2356 4971 3.009473 AGTGCCAATAAGTCAGACCACAT 59.991 43.478 0.00 0.00 0.00 3.21
2415 5034 7.899973 AGAATTTTCAGTGCCAATAAGTCATT 58.100 30.769 0.00 0.00 0.00 2.57
2419 5038 7.121315 GGAGTAGAATTTTCAGTGCCAATAAGT 59.879 37.037 0.00 0.00 0.00 2.24
2450 5070 8.870879 GTCAATAACGCTCTTATATTATGGGAC 58.129 37.037 0.00 0.00 0.00 4.46
2452 5072 8.656849 GTGTCAATAACGCTCTTATATTATGGG 58.343 37.037 0.00 0.00 35.42 4.00
2453 5073 9.424319 AGTGTCAATAACGCTCTTATATTATGG 57.576 33.333 0.00 0.00 45.69 2.74
2456 5076 9.603298 CGTAGTGTCAATAACGCTCTTATATTA 57.397 33.333 0.00 0.00 45.69 0.98
2457 5077 8.503486 CGTAGTGTCAATAACGCTCTTATATT 57.497 34.615 0.00 0.00 45.69 1.28
2491 5111 9.827198 TCCATCCCATAATATAAGAGCATTTTT 57.173 29.630 0.00 0.00 0.00 1.94
2492 5112 9.471702 CTCCATCCCATAATATAAGAGCATTTT 57.528 33.333 0.00 0.00 0.00 1.82
2493 5113 7.559170 GCTCCATCCCATAATATAAGAGCATTT 59.441 37.037 0.00 0.00 42.83 2.32
2494 5114 7.059156 GCTCCATCCCATAATATAAGAGCATT 58.941 38.462 0.00 0.00 42.83 3.56
2495 5115 6.599445 GCTCCATCCCATAATATAAGAGCAT 58.401 40.000 0.00 0.00 42.83 3.79
2496 5116 5.395657 CGCTCCATCCCATAATATAAGAGCA 60.396 44.000 8.67 0.00 43.33 4.26
2497 5117 5.053145 CGCTCCATCCCATAATATAAGAGC 58.947 45.833 0.00 0.00 40.55 4.09
2498 5118 6.097554 ACTCGCTCCATCCCATAATATAAGAG 59.902 42.308 0.00 0.00 0.00 2.85
2499 5119 5.958380 ACTCGCTCCATCCCATAATATAAGA 59.042 40.000 0.00 0.00 0.00 2.10
2500 5120 6.227298 ACTCGCTCCATCCCATAATATAAG 57.773 41.667 0.00 0.00 0.00 1.73
2501 5121 6.097839 GGTACTCGCTCCATCCCATAATATAA 59.902 42.308 0.00 0.00 0.00 0.98
2502 5122 5.597182 GGTACTCGCTCCATCCCATAATATA 59.403 44.000 0.00 0.00 0.00 0.86
2503 5123 4.406003 GGTACTCGCTCCATCCCATAATAT 59.594 45.833 0.00 0.00 0.00 1.28
2504 5124 3.767673 GGTACTCGCTCCATCCCATAATA 59.232 47.826 0.00 0.00 0.00 0.98
2505 5125 2.567615 GGTACTCGCTCCATCCCATAAT 59.432 50.000 0.00 0.00 0.00 1.28
2506 5126 1.968493 GGTACTCGCTCCATCCCATAA 59.032 52.381 0.00 0.00 0.00 1.90
2507 5127 1.133294 TGGTACTCGCTCCATCCCATA 60.133 52.381 0.00 0.00 0.00 2.74
2508 5128 0.398522 TGGTACTCGCTCCATCCCAT 60.399 55.000 0.00 0.00 0.00 4.00
2509 5129 0.616395 TTGGTACTCGCTCCATCCCA 60.616 55.000 0.00 0.00 33.50 4.37
2510 5130 0.759346 ATTGGTACTCGCTCCATCCC 59.241 55.000 0.00 0.00 33.50 3.85
2511 5131 2.158957 TCAATTGGTACTCGCTCCATCC 60.159 50.000 5.42 0.00 33.50 3.51
2512 5132 3.179443 TCAATTGGTACTCGCTCCATC 57.821 47.619 5.42 0.00 33.50 3.51
2513 5133 3.845781 ATCAATTGGTACTCGCTCCAT 57.154 42.857 5.42 0.00 33.50 3.41
2514 5134 3.627395 AATCAATTGGTACTCGCTCCA 57.373 42.857 5.42 0.00 0.00 3.86
2515 5135 4.965119 AAAATCAATTGGTACTCGCTCC 57.035 40.909 5.42 0.00 0.00 4.70
2516 5136 6.183309 AGAAAAATCAATTGGTACTCGCTC 57.817 37.500 5.42 0.00 0.00 5.03
2517 5137 6.206634 TCAAGAAAAATCAATTGGTACTCGCT 59.793 34.615 5.42 0.00 0.00 4.93
2518 5138 6.305638 GTCAAGAAAAATCAATTGGTACTCGC 59.694 38.462 5.42 0.00 0.00 5.03
2519 5139 7.535258 CAGTCAAGAAAAATCAATTGGTACTCG 59.465 37.037 5.42 0.00 0.00 4.18
2520 5140 8.352942 ACAGTCAAGAAAAATCAATTGGTACTC 58.647 33.333 5.42 0.00 0.00 2.59
2521 5141 8.237811 ACAGTCAAGAAAAATCAATTGGTACT 57.762 30.769 5.42 0.00 0.00 2.73
2522 5142 9.959749 TTACAGTCAAGAAAAATCAATTGGTAC 57.040 29.630 5.42 0.00 0.00 3.34
2524 5144 9.313118 GTTTACAGTCAAGAAAAATCAATTGGT 57.687 29.630 5.42 0.00 0.00 3.67
2525 5145 9.533253 AGTTTACAGTCAAGAAAAATCAATTGG 57.467 29.630 5.42 0.00 0.00 3.16
2528 5148 9.520204 CACAGTTTACAGTCAAGAAAAATCAAT 57.480 29.630 0.00 0.00 0.00 2.57
2529 5149 7.973388 CCACAGTTTACAGTCAAGAAAAATCAA 59.027 33.333 0.00 0.00 0.00 2.57
2530 5150 7.479980 CCACAGTTTACAGTCAAGAAAAATCA 58.520 34.615 0.00 0.00 0.00 2.57
2531 5151 6.417930 GCCACAGTTTACAGTCAAGAAAAATC 59.582 38.462 0.00 0.00 0.00 2.17
2532 5152 6.127479 TGCCACAGTTTACAGTCAAGAAAAAT 60.127 34.615 0.00 0.00 0.00 1.82
2533 5153 5.184096 TGCCACAGTTTACAGTCAAGAAAAA 59.816 36.000 0.00 0.00 0.00 1.94
2549 5169 3.081554 CCTAAGGCCTGCCACAGT 58.918 61.111 5.69 0.00 38.92 3.55
2550 5170 2.439156 GCCTAAGGCCTGCCACAG 60.439 66.667 5.69 6.51 44.06 3.66
2576 5196 4.022416 TGTTTTTGACAAGTGTTCAGCAGT 60.022 37.500 0.00 0.00 34.69 4.40
2578 5198 4.022416 ACTGTTTTTGACAAGTGTTCAGCA 60.022 37.500 0.00 0.00 37.93 4.41
2579 5199 4.485163 ACTGTTTTTGACAAGTGTTCAGC 58.515 39.130 0.00 0.00 37.93 4.26
2580 5200 7.081349 TGTAACTGTTTTTGACAAGTGTTCAG 58.919 34.615 0.00 0.00 37.93 3.02
2581 5201 6.971602 TGTAACTGTTTTTGACAAGTGTTCA 58.028 32.000 0.00 0.00 37.93 3.18
2582 5202 7.061789 CCTTGTAACTGTTTTTGACAAGTGTTC 59.938 37.037 22.53 0.00 43.47 3.18
2583 5203 6.866248 CCTTGTAACTGTTTTTGACAAGTGTT 59.134 34.615 22.53 0.00 43.47 3.32
2584 5204 6.015772 ACCTTGTAACTGTTTTTGACAAGTGT 60.016 34.615 22.53 18.52 43.47 3.55
2585 5205 6.307800 CACCTTGTAACTGTTTTTGACAAGTG 59.692 38.462 22.53 18.22 43.47 3.16
2586 5206 6.386654 CACCTTGTAACTGTTTTTGACAAGT 58.613 36.000 22.53 13.48 43.47 3.16
2587 5207 5.288472 GCACCTTGTAACTGTTTTTGACAAG 59.712 40.000 19.67 19.67 44.21 3.16
2588 5208 5.164954 GCACCTTGTAACTGTTTTTGACAA 58.835 37.500 0.00 2.48 37.93 3.18
2589 5209 4.218635 TGCACCTTGTAACTGTTTTTGACA 59.781 37.500 0.00 0.00 36.65 3.58
2590 5210 4.561213 GTGCACCTTGTAACTGTTTTTGAC 59.439 41.667 5.22 0.00 0.00 3.18
2591 5211 4.218635 TGTGCACCTTGTAACTGTTTTTGA 59.781 37.500 15.69 0.00 0.00 2.69
2632 5252 3.609853 TCACACCAGGCTAGCAAATTAG 58.390 45.455 18.24 3.95 0.00 1.73
2634 5254 2.584835 TCACACCAGGCTAGCAAATT 57.415 45.000 18.24 0.00 0.00 1.82
2637 5259 2.187958 AGTATCACACCAGGCTAGCAA 58.812 47.619 18.24 0.00 0.00 3.91
2653 5275 8.540507 TCTGGCTTTTCTCTATGTAGAAGTAT 57.459 34.615 0.00 0.00 36.85 2.12
2661 5283 5.809001 TCAACATCTGGCTTTTCTCTATGT 58.191 37.500 0.00 0.00 0.00 2.29
2662 5284 6.318144 ACATCAACATCTGGCTTTTCTCTATG 59.682 38.462 0.00 0.00 0.00 2.23
2688 5316 6.361297 CAACACATTGTAACACGCTTAATG 57.639 37.500 0.00 0.00 35.47 1.90
2704 5332 0.749818 TCGCCACACCAACAACACAT 60.750 50.000 0.00 0.00 0.00 3.21
2705 5333 0.960861 TTCGCCACACCAACAACACA 60.961 50.000 0.00 0.00 0.00 3.72
2712 5340 1.336440 CAAATGACTTCGCCACACCAA 59.664 47.619 0.00 0.00 0.00 3.67
2720 5348 6.256539 TCAGATAGATGTTCAAATGACTTCGC 59.743 38.462 0.00 0.00 0.00 4.70
2725 5353 8.778358 GGGTAATCAGATAGATGTTCAAATGAC 58.222 37.037 0.00 0.00 36.96 3.06
2736 5364 5.784390 ACATCAGCAGGGTAATCAGATAGAT 59.216 40.000 0.00 0.00 39.09 1.98
2737 5365 5.011431 CACATCAGCAGGGTAATCAGATAGA 59.989 44.000 0.00 0.00 0.00 1.98
2738 5366 5.221601 ACACATCAGCAGGGTAATCAGATAG 60.222 44.000 0.00 0.00 0.00 2.08
2739 5367 4.655649 ACACATCAGCAGGGTAATCAGATA 59.344 41.667 0.00 0.00 0.00 1.98
2771 5399 1.328279 GTTTGGACCTCACCTTTGGG 58.672 55.000 0.00 0.00 38.88 4.12
2772 5400 1.956477 CTGTTTGGACCTCACCTTTGG 59.044 52.381 0.00 0.00 0.00 3.28
2773 5401 1.338020 GCTGTTTGGACCTCACCTTTG 59.662 52.381 0.00 0.00 0.00 2.77
2774 5402 1.064017 TGCTGTTTGGACCTCACCTTT 60.064 47.619 0.00 0.00 0.00 3.11
2775 5403 0.550914 TGCTGTTTGGACCTCACCTT 59.449 50.000 0.00 0.00 0.00 3.50
2776 5404 0.109342 CTGCTGTTTGGACCTCACCT 59.891 55.000 0.00 0.00 0.00 4.00
2777 5405 1.518903 GCTGCTGTTTGGACCTCACC 61.519 60.000 0.00 0.00 0.00 4.02
2778 5406 0.536006 AGCTGCTGTTTGGACCTCAC 60.536 55.000 0.00 0.00 0.00 3.51
2779 5407 0.250467 GAGCTGCTGTTTGGACCTCA 60.250 55.000 7.01 0.00 0.00 3.86
2780 5408 0.036022 AGAGCTGCTGTTTGGACCTC 59.964 55.000 7.01 0.00 0.00 3.85
2781 5409 0.250640 CAGAGCTGCTGTTTGGACCT 60.251 55.000 7.01 0.00 39.85 3.85
2782 5410 2.251600 CAGAGCTGCTGTTTGGACC 58.748 57.895 7.01 0.00 39.85 4.46
2797 5425 6.773976 AGGAAATTGAAGAACACAAACAGA 57.226 33.333 0.00 0.00 0.00 3.41
2809 5437 6.376581 AGCACCTGATAGAAAGGAAATTGAAG 59.623 38.462 0.00 0.00 38.27 3.02
2812 5440 5.884792 AGAGCACCTGATAGAAAGGAAATTG 59.115 40.000 0.00 0.00 38.27 2.32
2841 5469 0.392998 AATCGGGATGGAGCACACAC 60.393 55.000 0.00 0.00 0.00 3.82
2849 5477 0.105862 ACCTACGGAATCGGGATGGA 60.106 55.000 0.00 0.00 41.39 3.41
2857 5485 1.004595 GTCGCCAAACCTACGGAATC 58.995 55.000 0.00 0.00 0.00 2.52
2859 5487 1.004679 GGTCGCCAAACCTACGGAA 60.005 57.895 0.00 0.00 36.32 4.30
2860 5488 2.658422 GGTCGCCAAACCTACGGA 59.342 61.111 0.00 0.00 36.32 4.69
2861 5489 2.435410 GGGTCGCCAAACCTACGG 60.435 66.667 0.00 0.00 39.42 4.02
2862 5490 2.435410 GGGGTCGCCAAACCTACG 60.435 66.667 0.00 0.00 39.42 3.51
2863 5491 0.675837 GAAGGGGTCGCCAAACCTAC 60.676 60.000 8.89 0.00 39.42 3.18
2864 5492 1.681076 GAAGGGGTCGCCAAACCTA 59.319 57.895 8.89 0.00 39.42 3.08
2865 5493 2.434774 GAAGGGGTCGCCAAACCT 59.565 61.111 8.89 0.00 39.42 3.50
2866 5494 2.675423 GGAAGGGGTCGCCAAACC 60.675 66.667 8.89 4.69 38.69 3.27
2867 5495 0.898326 AATGGAAGGGGTCGCCAAAC 60.898 55.000 8.89 0.00 34.95 2.93
2868 5496 0.897863 CAATGGAAGGGGTCGCCAAA 60.898 55.000 8.89 0.00 34.95 3.28
2873 5501 1.269448 CAAACACAATGGAAGGGGTCG 59.731 52.381 0.00 0.00 0.00 4.79
2876 5504 2.297033 CTGTCAAACACAATGGAAGGGG 59.703 50.000 0.00 0.00 33.31 4.79
2878 5506 4.520111 TCATCTGTCAAACACAATGGAAGG 59.480 41.667 0.00 0.00 33.31 3.46
2907 5535 1.818674 GGAAAAACGGCATCCATGAGT 59.181 47.619 0.00 0.00 33.30 3.41
2908 5536 1.134946 GGGAAAAACGGCATCCATGAG 59.865 52.381 0.00 0.00 34.82 2.90
2909 5537 1.181786 GGGAAAAACGGCATCCATGA 58.818 50.000 0.00 0.00 34.82 3.07
2910 5538 0.179140 CGGGAAAAACGGCATCCATG 60.179 55.000 0.00 0.00 34.82 3.66
2935 5563 4.278956 AACTAGCGTTGAAGCCGG 57.721 55.556 0.00 0.00 38.01 6.13
2983 5615 5.070770 AGTGCAAACATGAAACACAGAAA 57.929 34.783 0.00 0.00 33.69 2.52
2985 5617 4.422840 CAAGTGCAAACATGAAACACAGA 58.577 39.130 0.00 0.00 33.69 3.41
2986 5618 3.552699 CCAAGTGCAAACATGAAACACAG 59.447 43.478 0.00 0.00 33.69 3.66
2987 5619 3.056250 ACCAAGTGCAAACATGAAACACA 60.056 39.130 0.00 0.00 33.69 3.72
2988 5620 3.306703 CACCAAGTGCAAACATGAAACAC 59.693 43.478 0.00 2.21 0.00 3.32
2994 5626 2.030701 GCAAACACCAAGTGCAAACATG 59.969 45.455 0.00 0.00 36.98 3.21
2995 5627 2.278854 GCAAACACCAAGTGCAAACAT 58.721 42.857 0.00 0.00 36.98 2.71
2996 5628 1.674221 GGCAAACACCAAGTGCAAACA 60.674 47.619 0.00 0.00 40.12 2.83
2997 5629 1.006086 GGCAAACACCAAGTGCAAAC 58.994 50.000 0.00 0.00 40.12 2.93
2999 5631 1.140589 CGGCAAACACCAAGTGCAA 59.859 52.632 0.00 0.00 40.12 4.08
3000 5632 2.780094 CCGGCAAACACCAAGTGCA 61.780 57.895 0.00 0.00 40.12 4.57
3001 5633 2.027460 CCGGCAAACACCAAGTGC 59.973 61.111 0.00 0.00 36.98 4.40
3002 5634 1.065600 CACCGGCAAACACCAAGTG 59.934 57.895 0.00 0.00 39.75 3.16
3003 5635 1.379309 ACACCGGCAAACACCAAGT 60.379 52.632 0.00 0.00 0.00 3.16
3014 5646 0.389948 CACTAGAGAACCACACCGGC 60.390 60.000 0.00 0.00 39.03 6.13
3015 5647 0.966920 ACACTAGAGAACCACACCGG 59.033 55.000 0.00 0.00 42.50 5.28
3023 5655 7.515371 CGAAGAAGAACAACAACACTAGAGAAC 60.515 40.741 0.00 0.00 0.00 3.01
3029 5661 3.558418 GGCGAAGAAGAACAACAACACTA 59.442 43.478 0.00 0.00 0.00 2.74
3036 5668 5.607119 TTATTCAGGCGAAGAAGAACAAC 57.393 39.130 0.00 0.00 33.74 3.32
3037 5669 6.349280 CCATTTATTCAGGCGAAGAAGAACAA 60.349 38.462 0.00 0.00 34.05 2.83
3045 5677 2.781945 GCCCATTTATTCAGGCGAAG 57.218 50.000 0.00 0.00 35.30 3.79
3060 5692 1.986632 ATGCAGACATCGGATGCCCA 61.987 55.000 17.61 9.77 39.22 5.36
3061 5693 1.228063 ATGCAGACATCGGATGCCC 60.228 57.895 17.61 9.93 39.22 5.36
3062 5694 0.816825 ACATGCAGACATCGGATGCC 60.817 55.000 17.61 7.06 39.22 4.40
3065 5697 3.272574 AGAAACATGCAGACATCGGAT 57.727 42.857 0.00 0.00 32.87 4.18
3066 5698 2.768253 AGAAACATGCAGACATCGGA 57.232 45.000 0.00 0.00 32.87 4.55
3067 5699 3.935203 AGTAAGAAACATGCAGACATCGG 59.065 43.478 0.00 0.00 32.87 4.18
3068 5700 6.476706 TGATAGTAAGAAACATGCAGACATCG 59.523 38.462 0.00 0.00 32.87 3.84
3069 5701 7.776933 TGATAGTAAGAAACATGCAGACATC 57.223 36.000 0.00 0.00 32.87 3.06
3074 5707 9.926751 CTGTAATTGATAGTAAGAAACATGCAG 57.073 33.333 0.00 0.00 0.00 4.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.