Multiple sequence alignment - TraesCS5B01G354500

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G354500 chr5B 100.000 3009 0 0 1 3009 533515898 533512890 0.000000e+00 5557.0
1 TraesCS5B01G354500 chr5B 91.786 1680 98 20 512 2182 533573078 533571430 0.000000e+00 2302.0
2 TraesCS5B01G354500 chr5B 87.485 1718 149 31 511 2194 533565539 533563854 0.000000e+00 1921.0
3 TraesCS5B01G354500 chr5B 83.983 1642 201 41 511 2140 533451387 533449796 0.000000e+00 1519.0
4 TraesCS5B01G354500 chr5B 81.956 1646 222 46 511 2124 533494246 533492644 0.000000e+00 1325.0
5 TraesCS5B01G354500 chr5B 80.688 1512 223 44 514 2012 533383815 533382360 0.000000e+00 1110.0
6 TraesCS5B01G354500 chr5B 82.393 1187 183 21 840 2016 533088869 533087699 0.000000e+00 1011.0
7 TraesCS5B01G354500 chr5D 93.390 1649 93 9 512 2158 438722385 438720751 0.000000e+00 2427.0
8 TraesCS5B01G354500 chr5D 82.878 1647 215 39 513 2140 438569475 438567877 0.000000e+00 1417.0
9 TraesCS5B01G354500 chr5D 82.117 1644 224 43 511 2123 438589656 438588052 0.000000e+00 1343.0
10 TraesCS5B01G354500 chr5D 90.974 975 61 11 512 1484 438658500 438657551 0.000000e+00 1288.0
11 TraesCS5B01G354500 chr5D 80.293 1502 243 39 532 2016 438559063 438557598 0.000000e+00 1085.0
12 TraesCS5B01G354500 chr5D 80.013 1511 244 33 523 2012 438545170 438543697 0.000000e+00 1064.0
13 TraesCS5B01G354500 chr5D 91.606 691 48 6 1474 2160 438624318 438623634 0.000000e+00 946.0
14 TraesCS5B01G354500 chr5D 93.989 366 15 4 2328 2692 438623633 438623274 5.670000e-152 547.0
15 TraesCS5B01G354500 chr5D 94.136 324 16 1 2689 3009 438609125 438608802 9.690000e-135 490.0
16 TraesCS5B01G354500 chr5D 90.164 61 6 0 2938 2998 507838434 507838494 2.490000e-11 80.5
17 TraesCS5B01G354500 chr5D 86.364 66 9 0 2939 3004 404471065 404471000 4.160000e-09 73.1
18 TraesCS5B01G354500 chr5A 91.541 1655 109 12 512 2158 554236183 554234552 0.000000e+00 2252.0
19 TraesCS5B01G354500 chr5A 92.962 1222 76 6 511 1731 554218708 554217496 0.000000e+00 1772.0
20 TraesCS5B01G354500 chr5A 83.181 1641 217 39 511 2140 554182808 554181216 0.000000e+00 1447.0
21 TraesCS5B01G354500 chr5A 82.442 1646 221 48 511 2123 554201329 554199719 0.000000e+00 1376.0
22 TraesCS5B01G354500 chr5A 79.614 1501 259 34 530 2016 554083182 554081715 0.000000e+00 1033.0
23 TraesCS5B01G354500 chr5A 99.607 509 2 0 1 509 424029477 424029985 0.000000e+00 929.0
24 TraesCS5B01G354500 chr5A 99.409 508 3 0 1 508 424022668 424023175 0.000000e+00 922.0
25 TraesCS5B01G354500 chr5A 93.023 43 3 0 2932 2974 656051216 656051258 2.500000e-06 63.9
26 TraesCS5B01G354500 chr7A 99.803 508 1 0 1 508 619379182 619379689 0.000000e+00 933.0
27 TraesCS5B01G354500 chr7A 99.803 508 1 0 1 508 619391127 619391634 0.000000e+00 933.0
28 TraesCS5B01G354500 chr7A 99.217 511 4 0 1 511 39397185 39396675 0.000000e+00 922.0
29 TraesCS5B01G354500 chr7A 99.409 508 3 0 1 508 39405743 39405236 0.000000e+00 922.0
30 TraesCS5B01G354500 chr7A 99.409 508 3 0 1 508 111880786 111881293 0.000000e+00 922.0
31 TraesCS5B01G354500 chrUn 99.409 508 3 0 1 508 406802780 406803287 0.000000e+00 922.0
32 TraesCS5B01G354500 chrUn 80.699 1088 173 22 534 1609 63291953 63290891 0.000000e+00 811.0
33 TraesCS5B01G354500 chr1B 99.409 508 2 1 1 508 155421483 155420977 0.000000e+00 920.0
34 TraesCS5B01G354500 chr1B 92.778 180 11 2 2153 2331 628050865 628050687 2.980000e-65 259.0
35 TraesCS5B01G354500 chr4A 95.210 167 8 0 2167 2333 731972518 731972352 6.400000e-67 265.0
36 TraesCS5B01G354500 chr4A 84.043 94 14 1 2383 2476 684920488 684920396 4.130000e-14 89.8
37 TraesCS5B01G354500 chr3B 95.238 168 7 1 2165 2331 571752522 571752689 6.400000e-67 265.0
38 TraesCS5B01G354500 chr3B 94.186 172 9 1 2168 2338 68347168 68347339 8.270000e-66 261.0
39 TraesCS5B01G354500 chr3B 85.882 85 12 0 2391 2475 104712076 104711992 1.150000e-14 91.6
40 TraesCS5B01G354500 chr1D 93.820 178 8 3 2165 2340 360358390 360358214 6.400000e-67 265.0
41 TraesCS5B01G354500 chr1D 94.220 173 8 2 2165 2336 331539432 331539261 2.300000e-66 263.0
42 TraesCS5B01G354500 chr1D 93.678 174 10 1 2161 2333 81276526 81276353 2.980000e-65 259.0
43 TraesCS5B01G354500 chr1D 82.828 99 17 0 2379 2477 301353495 301353593 4.130000e-14 89.8
44 TraesCS5B01G354500 chr7D 94.220 173 7 3 2168 2339 381458552 381458382 8.270000e-66 261.0
45 TraesCS5B01G354500 chr6D 94.186 172 8 2 2168 2337 206560274 206560445 8.270000e-66 261.0
46 TraesCS5B01G354500 chr4D 87.059 85 11 0 2391 2475 455894153 455894237 2.470000e-16 97.1
47 TraesCS5B01G354500 chr3D 86.747 83 11 0 2391 2473 422472531 422472613 3.190000e-15 93.5
48 TraesCS5B01G354500 chr3D 81.579 76 12 1 2929 3004 525636220 525636293 9.010000e-06 62.1
49 TraesCS5B01G354500 chr2B 86.207 87 11 1 2391 2476 36590233 36590147 3.190000e-15 93.5
50 TraesCS5B01G354500 chr2B 88.525 61 6 1 2936 2995 779908568 779908628 4.160000e-09 73.1
51 TraesCS5B01G354500 chr7B 85.227 88 13 0 2391 2478 228390933 228390846 1.150000e-14 91.6
52 TraesCS5B01G354500 chr4B 85.882 85 12 0 2391 2475 23660866 23660782 1.150000e-14 91.6
53 TraesCS5B01G354500 chr6B 94.545 55 3 0 2935 2989 688035821 688035875 5.340000e-13 86.1
54 TraesCS5B01G354500 chr1A 86.957 69 9 0 2936 3004 357414463 357414395 8.940000e-11 78.7
55 TraesCS5B01G354500 chr2A 88.889 63 6 1 2936 2997 776592714 776592652 3.220000e-10 76.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G354500 chr5B 533512890 533515898 3008 True 5557.0 5557 100.0000 1 3009 1 chr5B.!!$R5 3008
1 TraesCS5B01G354500 chr5B 533571430 533573078 1648 True 2302.0 2302 91.7860 512 2182 1 chr5B.!!$R7 1670
2 TraesCS5B01G354500 chr5B 533563854 533565539 1685 True 1921.0 1921 87.4850 511 2194 1 chr5B.!!$R6 1683
3 TraesCS5B01G354500 chr5B 533449796 533451387 1591 True 1519.0 1519 83.9830 511 2140 1 chr5B.!!$R3 1629
4 TraesCS5B01G354500 chr5B 533492644 533494246 1602 True 1325.0 1325 81.9560 511 2124 1 chr5B.!!$R4 1613
5 TraesCS5B01G354500 chr5B 533382360 533383815 1455 True 1110.0 1110 80.6880 514 2012 1 chr5B.!!$R2 1498
6 TraesCS5B01G354500 chr5B 533087699 533088869 1170 True 1011.0 1011 82.3930 840 2016 1 chr5B.!!$R1 1176
7 TraesCS5B01G354500 chr5D 438720751 438722385 1634 True 2427.0 2427 93.3900 512 2158 1 chr5D.!!$R8 1646
8 TraesCS5B01G354500 chr5D 438567877 438569475 1598 True 1417.0 1417 82.8780 513 2140 1 chr5D.!!$R4 1627
9 TraesCS5B01G354500 chr5D 438588052 438589656 1604 True 1343.0 1343 82.1170 511 2123 1 chr5D.!!$R5 1612
10 TraesCS5B01G354500 chr5D 438657551 438658500 949 True 1288.0 1288 90.9740 512 1484 1 chr5D.!!$R7 972
11 TraesCS5B01G354500 chr5D 438557598 438559063 1465 True 1085.0 1085 80.2930 532 2016 1 chr5D.!!$R3 1484
12 TraesCS5B01G354500 chr5D 438543697 438545170 1473 True 1064.0 1064 80.0130 523 2012 1 chr5D.!!$R2 1489
13 TraesCS5B01G354500 chr5D 438623274 438624318 1044 True 746.5 946 92.7975 1474 2692 2 chr5D.!!$R9 1218
14 TraesCS5B01G354500 chr5A 554234552 554236183 1631 True 2252.0 2252 91.5410 512 2158 1 chr5A.!!$R5 1646
15 TraesCS5B01G354500 chr5A 554217496 554218708 1212 True 1772.0 1772 92.9620 511 1731 1 chr5A.!!$R4 1220
16 TraesCS5B01G354500 chr5A 554181216 554182808 1592 True 1447.0 1447 83.1810 511 2140 1 chr5A.!!$R2 1629
17 TraesCS5B01G354500 chr5A 554199719 554201329 1610 True 1376.0 1376 82.4420 511 2123 1 chr5A.!!$R3 1612
18 TraesCS5B01G354500 chr5A 554081715 554083182 1467 True 1033.0 1033 79.6140 530 2016 1 chr5A.!!$R1 1486
19 TraesCS5B01G354500 chr5A 424029477 424029985 508 False 929.0 929 99.6070 1 509 1 chr5A.!!$F2 508
20 TraesCS5B01G354500 chr5A 424022668 424023175 507 False 922.0 922 99.4090 1 508 1 chr5A.!!$F1 507
21 TraesCS5B01G354500 chr7A 619379182 619379689 507 False 933.0 933 99.8030 1 508 1 chr7A.!!$F2 507
22 TraesCS5B01G354500 chr7A 619391127 619391634 507 False 933.0 933 99.8030 1 508 1 chr7A.!!$F3 507
23 TraesCS5B01G354500 chr7A 39396675 39397185 510 True 922.0 922 99.2170 1 511 1 chr7A.!!$R1 510
24 TraesCS5B01G354500 chr7A 39405236 39405743 507 True 922.0 922 99.4090 1 508 1 chr7A.!!$R2 507
25 TraesCS5B01G354500 chr7A 111880786 111881293 507 False 922.0 922 99.4090 1 508 1 chr7A.!!$F1 507
26 TraesCS5B01G354500 chrUn 406802780 406803287 507 False 922.0 922 99.4090 1 508 1 chrUn.!!$F1 507
27 TraesCS5B01G354500 chrUn 63290891 63291953 1062 True 811.0 811 80.6990 534 1609 1 chrUn.!!$R1 1075
28 TraesCS5B01G354500 chr1B 155420977 155421483 506 True 920.0 920 99.4090 1 508 1 chr1B.!!$R1 507

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
556 559 1.266989 GGCAAGAACAAGAAAGGGACG 59.733 52.381 0.0 0.0 0.0 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2214 2352 0.32005 TGTTGCTCCGTATGCAGTCA 59.68 50.0 0.0 0.0 41.71 3.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
88 89 2.637872 CCCTTTTTCCCCTTTCCTTTCC 59.362 50.000 0.00 0.00 0.00 3.13
556 559 1.266989 GGCAAGAACAAGAAAGGGACG 59.733 52.381 0.00 0.00 0.00 4.79
582 585 5.129485 AGCGAAAGAAGATAAGATTGGAGGA 59.871 40.000 0.00 0.00 0.00 3.71
626 629 5.545063 TGAAAAAGAAAACCTTCCCCATC 57.455 39.130 0.00 0.00 33.02 3.51
628 631 4.955811 AAAAGAAAACCTTCCCCATCAC 57.044 40.909 0.00 0.00 33.02 3.06
691 695 4.202010 ACAACCCACAATTTCTCTGAAACG 60.202 41.667 0.00 0.00 0.00 3.60
695 699 3.300009 CACAATTTCTCTGAAACGTGCC 58.700 45.455 0.00 0.00 0.00 5.01
1000 1041 1.406069 GCGAGGGAGATGAAAAGCTCA 60.406 52.381 0.00 0.00 38.81 4.26
1218 1268 2.440539 TCTTCACGAAGACTCAAGGC 57.559 50.000 5.38 0.00 42.06 4.35
1237 1287 5.495926 AGGCTCACCATAATTCATAGAGG 57.504 43.478 0.00 0.00 39.06 3.69
1576 1666 3.290710 CTCCATTAGTGAAACCATGGGG 58.709 50.000 18.09 3.19 44.53 4.96
1763 1881 0.037790 GCTGCCGGACTCATCTATCC 60.038 60.000 5.05 0.00 0.00 2.59
1878 1996 5.924356 TGTTGTGTTTGTCCTAGAGAATGA 58.076 37.500 0.00 0.00 0.00 2.57
1881 2011 6.419484 TGTGTTTGTCCTAGAGAATGAGAA 57.581 37.500 0.00 0.00 0.00 2.87
1885 2015 4.703645 TGTCCTAGAGAATGAGAACACG 57.296 45.455 0.00 0.00 0.00 4.49
2118 2254 8.049117 TGTATGGCTCAAAAAGTTAGAGATGAT 58.951 33.333 0.00 0.00 0.00 2.45
2160 2298 1.519408 GATGTACCGTGTGTTGCCTT 58.481 50.000 0.00 0.00 0.00 4.35
2161 2299 1.196808 GATGTACCGTGTGTTGCCTTG 59.803 52.381 0.00 0.00 0.00 3.61
2162 2300 1.281656 GTACCGTGTGTTGCCTTGC 59.718 57.895 0.00 0.00 0.00 4.01
2163 2301 1.894756 TACCGTGTGTTGCCTTGCC 60.895 57.895 0.00 0.00 0.00 4.52
2182 2320 1.214923 CCTAGTACTCCCTCCGTTCCT 59.785 57.143 0.00 0.00 0.00 3.36
2188 2326 5.713807 AGTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
2194 2332 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
2195 2333 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
2196 2334 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
2197 2335 7.122204 CCCTCCGTTCCTAAATATTTGTCTTTT 59.878 37.037 11.05 0.00 0.00 2.27
2198 2336 8.520351 CCTCCGTTCCTAAATATTTGTCTTTTT 58.480 33.333 11.05 0.00 0.00 1.94
2201 2339 9.783256 CCGTTCCTAAATATTTGTCTTTTTAGG 57.217 33.333 11.05 12.11 46.30 2.69
2202 2340 9.783256 CGTTCCTAAATATTTGTCTTTTTAGGG 57.217 33.333 11.05 2.25 45.55 3.53
2213 2351 8.940768 TTTGTCTTTTTAGGGATTTCAACAAG 57.059 30.769 0.00 0.00 0.00 3.16
2214 2352 7.654022 TGTCTTTTTAGGGATTTCAACAAGT 57.346 32.000 0.00 0.00 0.00 3.16
2215 2353 7.488322 TGTCTTTTTAGGGATTTCAACAAGTG 58.512 34.615 0.00 0.00 0.00 3.16
2216 2354 7.340743 TGTCTTTTTAGGGATTTCAACAAGTGA 59.659 33.333 0.00 0.00 0.00 3.41
2217 2355 7.648112 GTCTTTTTAGGGATTTCAACAAGTGAC 59.352 37.037 0.00 0.00 35.39 3.67
2218 2356 7.559897 TCTTTTTAGGGATTTCAACAAGTGACT 59.440 33.333 0.00 0.00 35.39 3.41
2219 2357 6.633500 TTTAGGGATTTCAACAAGTGACTG 57.367 37.500 0.00 0.00 35.39 3.51
2220 2358 2.887152 AGGGATTTCAACAAGTGACTGC 59.113 45.455 0.00 0.00 35.39 4.40
2221 2359 2.622942 GGGATTTCAACAAGTGACTGCA 59.377 45.455 0.00 0.00 35.39 4.41
2222 2360 3.256631 GGGATTTCAACAAGTGACTGCAT 59.743 43.478 0.00 0.00 35.39 3.96
2223 2361 4.458989 GGGATTTCAACAAGTGACTGCATA 59.541 41.667 0.00 0.00 35.39 3.14
2224 2362 5.393962 GGATTTCAACAAGTGACTGCATAC 58.606 41.667 0.00 0.00 35.39 2.39
2225 2363 4.466567 TTTCAACAAGTGACTGCATACG 57.533 40.909 0.00 0.00 35.39 3.06
2226 2364 2.412870 TCAACAAGTGACTGCATACGG 58.587 47.619 0.00 0.00 0.00 4.02
2227 2365 2.036604 TCAACAAGTGACTGCATACGGA 59.963 45.455 0.00 0.00 0.00 4.69
2228 2366 2.370281 ACAAGTGACTGCATACGGAG 57.630 50.000 0.00 0.00 36.48 4.63
2229 2367 1.002366 CAAGTGACTGCATACGGAGC 58.998 55.000 0.00 0.00 32.91 4.70
2230 2368 0.608130 AAGTGACTGCATACGGAGCA 59.392 50.000 0.00 0.00 40.19 4.26
2231 2369 0.608130 AGTGACTGCATACGGAGCAA 59.392 50.000 0.00 0.00 42.17 3.91
2232 2370 0.721718 GTGACTGCATACGGAGCAAC 59.278 55.000 0.00 0.00 42.17 4.17
2233 2371 0.320050 TGACTGCATACGGAGCAACA 59.680 50.000 0.00 2.07 42.17 3.33
2234 2372 1.066215 TGACTGCATACGGAGCAACAT 60.066 47.619 0.00 0.00 42.17 2.71
2235 2373 1.328680 GACTGCATACGGAGCAACATG 59.671 52.381 0.00 0.00 42.17 3.21
2236 2374 1.066215 ACTGCATACGGAGCAACATGA 60.066 47.619 0.00 0.00 42.17 3.07
2237 2375 1.596260 CTGCATACGGAGCAACATGAG 59.404 52.381 0.00 0.00 42.17 2.90
2238 2376 1.066215 TGCATACGGAGCAACATGAGT 60.066 47.619 0.00 0.00 39.39 3.41
2239 2377 1.328680 GCATACGGAGCAACATGAGTG 59.671 52.381 0.00 0.00 0.00 3.51
2240 2378 2.892374 CATACGGAGCAACATGAGTGA 58.108 47.619 0.00 0.00 0.00 3.41
2241 2379 3.261580 CATACGGAGCAACATGAGTGAA 58.738 45.455 0.00 0.00 0.00 3.18
2242 2380 2.479566 ACGGAGCAACATGAGTGAAT 57.520 45.000 0.00 0.00 0.00 2.57
2243 2381 2.350522 ACGGAGCAACATGAGTGAATC 58.649 47.619 0.00 0.00 0.00 2.52
2244 2382 2.027745 ACGGAGCAACATGAGTGAATCT 60.028 45.455 0.00 0.00 0.00 2.40
2245 2383 3.195610 ACGGAGCAACATGAGTGAATCTA 59.804 43.478 0.00 0.00 0.00 1.98
2246 2384 3.553511 CGGAGCAACATGAGTGAATCTAC 59.446 47.826 0.00 0.00 0.00 2.59
2247 2385 4.507710 GGAGCAACATGAGTGAATCTACA 58.492 43.478 0.00 0.00 0.00 2.74
2248 2386 5.121811 GGAGCAACATGAGTGAATCTACAT 58.878 41.667 0.00 0.00 0.00 2.29
2249 2387 5.587844 GGAGCAACATGAGTGAATCTACATT 59.412 40.000 0.00 0.00 0.00 2.71
2250 2388 6.238320 GGAGCAACATGAGTGAATCTACATTC 60.238 42.308 0.00 0.00 39.24 2.67
2251 2389 6.413052 AGCAACATGAGTGAATCTACATTCT 58.587 36.000 0.00 0.00 39.49 2.40
2252 2390 7.559486 AGCAACATGAGTGAATCTACATTCTA 58.441 34.615 0.00 0.00 39.49 2.10
2253 2391 8.043113 AGCAACATGAGTGAATCTACATTCTAA 58.957 33.333 0.00 0.00 39.49 2.10
2254 2392 8.668353 GCAACATGAGTGAATCTACATTCTAAA 58.332 33.333 0.00 0.00 39.49 1.85
2284 2422 9.990868 TGTCTATATACATCCATATGTGGTAGT 57.009 33.333 8.51 10.44 45.99 2.73
2286 2424 9.642343 TCTATATACATCCATATGTGGTAGTCC 57.358 37.037 8.51 0.00 45.99 3.85
2287 2425 9.647918 CTATATACATCCATATGTGGTAGTCCT 57.352 37.037 8.51 3.27 45.99 3.85
2288 2426 8.917414 ATATACATCCATATGTGGTAGTCCTT 57.083 34.615 8.51 1.36 45.99 3.36
2289 2427 5.975988 ACATCCATATGTGGTAGTCCTTT 57.024 39.130 8.51 0.00 44.79 3.11
2290 2428 5.684704 ACATCCATATGTGGTAGTCCTTTG 58.315 41.667 8.51 0.00 44.79 2.77
2291 2429 5.428457 ACATCCATATGTGGTAGTCCTTTGA 59.572 40.000 8.51 0.00 44.79 2.69
2292 2430 6.069673 ACATCCATATGTGGTAGTCCTTTGAA 60.070 38.462 8.51 0.00 44.79 2.69
2293 2431 6.381498 TCCATATGTGGTAGTCCTTTGAAA 57.619 37.500 8.51 0.00 46.16 2.69
2294 2432 6.969043 TCCATATGTGGTAGTCCTTTGAAAT 58.031 36.000 8.51 0.00 46.16 2.17
2295 2433 7.054124 TCCATATGTGGTAGTCCTTTGAAATC 58.946 38.462 8.51 0.00 46.16 2.17
2296 2434 7.056635 CCATATGTGGTAGTCCTTTGAAATCT 58.943 38.462 0.00 0.00 40.83 2.40
2297 2435 7.227512 CCATATGTGGTAGTCCTTTGAAATCTC 59.772 40.741 0.00 0.00 40.83 2.75
2298 2436 5.825593 TGTGGTAGTCCTTTGAAATCTCT 57.174 39.130 0.00 0.00 34.23 3.10
2299 2437 6.928348 TGTGGTAGTCCTTTGAAATCTCTA 57.072 37.500 0.00 0.00 34.23 2.43
2300 2438 7.311092 TGTGGTAGTCCTTTGAAATCTCTAA 57.689 36.000 0.00 0.00 34.23 2.10
2301 2439 7.741785 TGTGGTAGTCCTTTGAAATCTCTAAA 58.258 34.615 0.00 0.00 34.23 1.85
2302 2440 8.215050 TGTGGTAGTCCTTTGAAATCTCTAAAA 58.785 33.333 0.00 0.00 34.23 1.52
2303 2441 9.063615 GTGGTAGTCCTTTGAAATCTCTAAAAA 57.936 33.333 0.00 0.00 34.23 1.94
2326 2464 6.769134 AAACAAATATTTAGGAACGGAGGG 57.231 37.500 0.00 0.00 0.00 4.30
2348 2486 9.084533 GAGGGAGTAGTCATTATCTTTGAGTAT 57.915 37.037 0.00 0.00 33.00 2.12
2390 2528 9.555727 TTTTTGTCTGTATAATATACTGCTCCC 57.444 33.333 11.25 2.26 0.00 4.30
2391 2529 8.492415 TTTGTCTGTATAATATACTGCTCCCT 57.508 34.615 11.25 0.00 0.00 4.20
2392 2530 7.704578 TGTCTGTATAATATACTGCTCCCTC 57.295 40.000 11.25 1.22 0.00 4.30
2415 2553 5.958380 TCACTCTGTCCCATAACATAAGAGT 59.042 40.000 0.00 0.00 34.40 3.24
2424 2562 6.878923 TCCCATAACATAAGAGTGTTTCTGTG 59.121 38.462 0.00 0.00 42.08 3.66
2438 2576 5.063060 GTGTTTCTGTGATTGGTATACCGTC 59.937 44.000 17.13 16.69 39.43 4.79
2443 2581 5.872617 TCTGTGATTGGTATACCGTCAAAAG 59.127 40.000 23.69 22.23 39.43 2.27
2458 2596 6.073765 ACCGTCAAAAGCGCTCTTATATTATG 60.074 38.462 12.06 2.09 31.02 1.90
2474 2612 1.229131 TATGGGACGGAGGGAGTACT 58.771 55.000 0.00 0.00 0.00 2.73
2534 2672 6.395780 TGAAGGGACCTTTACATTGGATAA 57.604 37.500 4.89 0.00 36.26 1.75
2539 2677 7.935405 AGGGACCTTTACATTGGATAAAAGTA 58.065 34.615 0.00 0.00 0.00 2.24
2562 2700 3.305720 TCAGGTGGTAGTGTTCTTGTCT 58.694 45.455 0.00 0.00 0.00 3.41
2571 2709 5.047943 GGTAGTGTTCTTGTCTGCTCTTCTA 60.048 44.000 0.00 0.00 0.00 2.10
2692 2831 3.609103 AGCACGTTGACTGATTTGAAC 57.391 42.857 0.00 0.00 0.00 3.18
2693 2832 2.942376 AGCACGTTGACTGATTTGAACA 59.058 40.909 0.00 0.00 0.00 3.18
2694 2833 3.035942 GCACGTTGACTGATTTGAACAC 58.964 45.455 0.00 0.00 0.00 3.32
2695 2834 3.279950 CACGTTGACTGATTTGAACACG 58.720 45.455 0.00 0.00 0.00 4.49
2696 2835 2.286833 ACGTTGACTGATTTGAACACGG 59.713 45.455 0.00 0.00 0.00 4.94
2697 2836 2.542178 CGTTGACTGATTTGAACACGGA 59.458 45.455 0.00 0.00 0.00 4.69
2698 2837 3.362986 CGTTGACTGATTTGAACACGGAG 60.363 47.826 0.00 0.00 0.00 4.63
2699 2838 2.766313 TGACTGATTTGAACACGGAGG 58.234 47.619 0.00 0.00 0.00 4.30
2700 2839 2.367241 TGACTGATTTGAACACGGAGGA 59.633 45.455 0.00 0.00 0.00 3.71
2701 2840 2.996621 GACTGATTTGAACACGGAGGAG 59.003 50.000 0.00 0.00 0.00 3.69
2702 2841 2.289694 ACTGATTTGAACACGGAGGAGG 60.290 50.000 0.00 0.00 0.00 4.30
2703 2842 1.003118 TGATTTGAACACGGAGGAGGG 59.997 52.381 0.00 0.00 0.00 4.30
2704 2843 1.278127 GATTTGAACACGGAGGAGGGA 59.722 52.381 0.00 0.00 0.00 4.20
2705 2844 0.395312 TTTGAACACGGAGGAGGGAC 59.605 55.000 0.00 0.00 0.00 4.46
2706 2845 0.761323 TTGAACACGGAGGAGGGACA 60.761 55.000 0.00 0.00 0.00 4.02
2707 2846 0.761323 TGAACACGGAGGAGGGACAA 60.761 55.000 0.00 0.00 0.00 3.18
2708 2847 0.037232 GAACACGGAGGAGGGACAAG 60.037 60.000 0.00 0.00 0.00 3.16
2709 2848 1.481056 AACACGGAGGAGGGACAAGG 61.481 60.000 0.00 0.00 0.00 3.61
2710 2849 1.609501 CACGGAGGAGGGACAAGGA 60.610 63.158 0.00 0.00 0.00 3.36
2711 2850 0.978146 CACGGAGGAGGGACAAGGAT 60.978 60.000 0.00 0.00 0.00 3.24
2712 2851 0.252742 ACGGAGGAGGGACAAGGATT 60.253 55.000 0.00 0.00 0.00 3.01
2713 2852 0.912486 CGGAGGAGGGACAAGGATTT 59.088 55.000 0.00 0.00 0.00 2.17
2714 2853 1.134371 CGGAGGAGGGACAAGGATTTC 60.134 57.143 0.00 0.00 0.00 2.17
2715 2854 2.200955 GGAGGAGGGACAAGGATTTCT 58.799 52.381 0.00 0.00 0.00 2.52
2716 2855 2.578480 GGAGGAGGGACAAGGATTTCTT 59.422 50.000 0.00 0.00 35.79 2.52
2717 2856 3.010696 GGAGGAGGGACAAGGATTTCTTT 59.989 47.826 0.00 0.00 32.41 2.52
2718 2857 4.013050 GAGGAGGGACAAGGATTTCTTTG 58.987 47.826 1.30 1.30 38.67 2.77
2719 2858 3.092301 GGAGGGACAAGGATTTCTTTGG 58.908 50.000 7.26 0.00 37.27 3.28
2720 2859 3.092301 GAGGGACAAGGATTTCTTTGGG 58.908 50.000 7.26 0.00 37.27 4.12
2721 2860 2.721906 AGGGACAAGGATTTCTTTGGGA 59.278 45.455 7.26 0.00 37.27 4.37
2722 2861 3.337909 AGGGACAAGGATTTCTTTGGGAT 59.662 43.478 7.26 0.00 37.27 3.85
2723 2862 4.096681 GGGACAAGGATTTCTTTGGGATT 58.903 43.478 7.26 0.00 37.27 3.01
2724 2863 4.532126 GGGACAAGGATTTCTTTGGGATTT 59.468 41.667 7.26 0.00 37.27 2.17
2725 2864 5.482006 GGACAAGGATTTCTTTGGGATTTG 58.518 41.667 7.26 0.00 37.27 2.32
2726 2865 5.482006 GACAAGGATTTCTTTGGGATTTGG 58.518 41.667 7.26 0.00 37.27 3.28
2727 2866 4.286808 ACAAGGATTTCTTTGGGATTTGGG 59.713 41.667 7.26 0.00 37.27 4.12
2728 2867 3.453868 AGGATTTCTTTGGGATTTGGGG 58.546 45.455 0.00 0.00 0.00 4.96
2729 2868 3.078918 AGGATTTCTTTGGGATTTGGGGA 59.921 43.478 0.00 0.00 0.00 4.81
2730 2869 4.040047 GGATTTCTTTGGGATTTGGGGAT 58.960 43.478 0.00 0.00 0.00 3.85
2731 2870 4.474651 GGATTTCTTTGGGATTTGGGGATT 59.525 41.667 0.00 0.00 0.00 3.01
2732 2871 5.044919 GGATTTCTTTGGGATTTGGGGATTT 60.045 40.000 0.00 0.00 0.00 2.17
2733 2872 5.497464 TTTCTTTGGGATTTGGGGATTTC 57.503 39.130 0.00 0.00 0.00 2.17
2734 2873 4.139162 TCTTTGGGATTTGGGGATTTCA 57.861 40.909 0.00 0.00 0.00 2.69
2735 2874 4.697798 TCTTTGGGATTTGGGGATTTCAT 58.302 39.130 0.00 0.00 0.00 2.57
2736 2875 4.716287 TCTTTGGGATTTGGGGATTTCATC 59.284 41.667 0.00 0.00 0.00 2.92
2744 2883 3.813596 GGATTTCATCCGCGTGCT 58.186 55.556 4.92 0.00 40.13 4.40
2745 2884 1.353103 GGATTTCATCCGCGTGCTG 59.647 57.895 4.92 0.00 40.13 4.41
2746 2885 1.369091 GGATTTCATCCGCGTGCTGT 61.369 55.000 4.92 0.00 40.13 4.40
2747 2886 0.247814 GATTTCATCCGCGTGCTGTG 60.248 55.000 4.92 0.00 0.00 3.66
2754 2893 3.857854 CGCGTGCTGTGGAGATGC 61.858 66.667 0.00 0.00 0.00 3.91
2755 2894 2.743538 GCGTGCTGTGGAGATGCA 60.744 61.111 0.00 0.00 0.00 3.96
2757 2896 3.171987 GTGCTGTGGAGATGCACG 58.828 61.111 0.00 0.00 45.62 5.34
2758 2897 1.669115 GTGCTGTGGAGATGCACGT 60.669 57.895 0.00 0.00 45.62 4.49
2759 2898 1.071299 TGCTGTGGAGATGCACGTT 59.929 52.632 0.00 0.00 0.00 3.99
2760 2899 0.534877 TGCTGTGGAGATGCACGTTT 60.535 50.000 0.00 0.00 0.00 3.60
2761 2900 0.593128 GCTGTGGAGATGCACGTTTT 59.407 50.000 0.00 0.00 0.00 2.43
2762 2901 1.001378 GCTGTGGAGATGCACGTTTTT 60.001 47.619 0.00 0.00 0.00 1.94
2763 2902 2.225491 GCTGTGGAGATGCACGTTTTTA 59.775 45.455 0.00 0.00 0.00 1.52
2764 2903 3.119849 GCTGTGGAGATGCACGTTTTTAT 60.120 43.478 0.00 0.00 0.00 1.40
2765 2904 4.615912 GCTGTGGAGATGCACGTTTTTATT 60.616 41.667 0.00 0.00 0.00 1.40
2766 2905 5.446143 TGTGGAGATGCACGTTTTTATTT 57.554 34.783 0.00 0.00 0.00 1.40
2767 2906 6.561737 TGTGGAGATGCACGTTTTTATTTA 57.438 33.333 0.00 0.00 0.00 1.40
2768 2907 6.375377 TGTGGAGATGCACGTTTTTATTTAC 58.625 36.000 0.00 0.00 0.00 2.01
2769 2908 5.798434 GTGGAGATGCACGTTTTTATTTACC 59.202 40.000 0.00 0.00 0.00 2.85
2770 2909 5.708230 TGGAGATGCACGTTTTTATTTACCT 59.292 36.000 0.00 0.00 0.00 3.08
2771 2910 6.027749 GGAGATGCACGTTTTTATTTACCTG 58.972 40.000 0.00 0.00 0.00 4.00
2772 2911 6.128117 GGAGATGCACGTTTTTATTTACCTGA 60.128 38.462 0.00 0.00 0.00 3.86
2773 2912 7.209471 AGATGCACGTTTTTATTTACCTGAA 57.791 32.000 0.00 0.00 0.00 3.02
2774 2913 7.305474 AGATGCACGTTTTTATTTACCTGAAG 58.695 34.615 0.00 0.00 0.00 3.02
2775 2914 6.621316 TGCACGTTTTTATTTACCTGAAGA 57.379 33.333 0.00 0.00 0.00 2.87
2776 2915 7.209471 TGCACGTTTTTATTTACCTGAAGAT 57.791 32.000 0.00 0.00 0.00 2.40
2777 2916 7.653647 TGCACGTTTTTATTTACCTGAAGATT 58.346 30.769 0.00 0.00 0.00 2.40
2778 2917 8.784994 TGCACGTTTTTATTTACCTGAAGATTA 58.215 29.630 0.00 0.00 0.00 1.75
2779 2918 9.274065 GCACGTTTTTATTTACCTGAAGATTAG 57.726 33.333 0.00 0.00 0.00 1.73
2780 2919 9.274065 CACGTTTTTATTTACCTGAAGATTAGC 57.726 33.333 0.00 0.00 0.00 3.09
2781 2920 8.456471 ACGTTTTTATTTACCTGAAGATTAGCC 58.544 33.333 0.00 0.00 0.00 3.93
2782 2921 7.638683 CGTTTTTATTTACCTGAAGATTAGCCG 59.361 37.037 0.00 0.00 0.00 5.52
2783 2922 6.613755 TTTATTTACCTGAAGATTAGCCGC 57.386 37.500 0.00 0.00 0.00 6.53
2784 2923 2.614829 TTACCTGAAGATTAGCCGCC 57.385 50.000 0.00 0.00 0.00 6.13
2785 2924 1.491668 TACCTGAAGATTAGCCGCCA 58.508 50.000 0.00 0.00 0.00 5.69
2786 2925 0.618458 ACCTGAAGATTAGCCGCCAA 59.382 50.000 0.00 0.00 0.00 4.52
2787 2926 1.212935 ACCTGAAGATTAGCCGCCAAT 59.787 47.619 0.00 0.00 0.00 3.16
2788 2927 2.301346 CCTGAAGATTAGCCGCCAATT 58.699 47.619 0.00 0.00 0.00 2.32
2789 2928 2.689983 CCTGAAGATTAGCCGCCAATTT 59.310 45.455 0.00 0.00 0.00 1.82
2790 2929 3.489738 CCTGAAGATTAGCCGCCAATTTG 60.490 47.826 0.00 0.00 0.00 2.32
2791 2930 3.088532 TGAAGATTAGCCGCCAATTTGT 58.911 40.909 0.00 0.00 0.00 2.83
2792 2931 3.509575 TGAAGATTAGCCGCCAATTTGTT 59.490 39.130 0.00 0.00 0.00 2.83
2793 2932 4.021544 TGAAGATTAGCCGCCAATTTGTTT 60.022 37.500 0.00 0.00 0.00 2.83
2794 2933 3.848726 AGATTAGCCGCCAATTTGTTTG 58.151 40.909 0.00 0.00 34.93 2.93
2795 2934 3.258123 AGATTAGCCGCCAATTTGTTTGT 59.742 39.130 0.00 0.00 33.15 2.83
2796 2935 4.461081 AGATTAGCCGCCAATTTGTTTGTA 59.539 37.500 0.00 0.00 33.15 2.41
2797 2936 4.585955 TTAGCCGCCAATTTGTTTGTAA 57.414 36.364 0.00 0.00 33.15 2.41
2798 2937 3.460857 AGCCGCCAATTTGTTTGTAAA 57.539 38.095 0.00 0.00 33.15 2.01
2799 2938 4.001618 AGCCGCCAATTTGTTTGTAAAT 57.998 36.364 0.00 0.00 33.15 1.40
2800 2939 3.993736 AGCCGCCAATTTGTTTGTAAATC 59.006 39.130 0.00 0.00 33.15 2.17
2801 2940 3.743396 GCCGCCAATTTGTTTGTAAATCA 59.257 39.130 0.00 0.00 33.15 2.57
2802 2941 4.143137 GCCGCCAATTTGTTTGTAAATCAG 60.143 41.667 0.00 0.00 33.15 2.90
2803 2942 5.226396 CCGCCAATTTGTTTGTAAATCAGA 58.774 37.500 0.00 0.00 33.15 3.27
2804 2943 5.118510 CCGCCAATTTGTTTGTAAATCAGAC 59.881 40.000 0.00 0.00 33.15 3.51
2805 2944 5.689514 CGCCAATTTGTTTGTAAATCAGACA 59.310 36.000 0.00 0.00 38.98 3.41
2806 2945 6.365789 CGCCAATTTGTTTGTAAATCAGACAT 59.634 34.615 0.00 0.00 40.11 3.06
2807 2946 7.095691 CGCCAATTTGTTTGTAAATCAGACATT 60.096 33.333 0.00 0.00 40.11 2.71
2808 2947 8.223100 GCCAATTTGTTTGTAAATCAGACATTC 58.777 33.333 0.00 0.00 40.11 2.67
2809 2948 8.711457 CCAATTTGTTTGTAAATCAGACATTCC 58.289 33.333 0.00 0.00 40.11 3.01
2810 2949 9.258826 CAATTTGTTTGTAAATCAGACATTCCA 57.741 29.630 0.00 0.00 40.11 3.53
2811 2950 8.816640 ATTTGTTTGTAAATCAGACATTCCAC 57.183 30.769 0.00 0.00 40.11 4.02
2812 2951 6.951062 TGTTTGTAAATCAGACATTCCACA 57.049 33.333 0.00 0.00 36.46 4.17
2813 2952 6.969366 TGTTTGTAAATCAGACATTCCACAG 58.031 36.000 0.00 0.00 36.46 3.66
2814 2953 5.627499 TTGTAAATCAGACATTCCACAGC 57.373 39.130 0.00 0.00 0.00 4.40
2815 2954 3.684305 TGTAAATCAGACATTCCACAGCG 59.316 43.478 0.00 0.00 0.00 5.18
2816 2955 2.479566 AATCAGACATTCCACAGCGT 57.520 45.000 0.00 0.00 0.00 5.07
2817 2956 2.479566 ATCAGACATTCCACAGCGTT 57.520 45.000 0.00 0.00 0.00 4.84
2818 2957 2.254546 TCAGACATTCCACAGCGTTT 57.745 45.000 0.00 0.00 0.00 3.60
2819 2958 3.394674 TCAGACATTCCACAGCGTTTA 57.605 42.857 0.00 0.00 0.00 2.01
2820 2959 3.937814 TCAGACATTCCACAGCGTTTAT 58.062 40.909 0.00 0.00 0.00 1.40
2821 2960 4.323417 TCAGACATTCCACAGCGTTTATT 58.677 39.130 0.00 0.00 0.00 1.40
2822 2961 4.759693 TCAGACATTCCACAGCGTTTATTT 59.240 37.500 0.00 0.00 0.00 1.40
2823 2962 5.240623 TCAGACATTCCACAGCGTTTATTTT 59.759 36.000 0.00 0.00 0.00 1.82
2824 2963 5.920273 CAGACATTCCACAGCGTTTATTTTT 59.080 36.000 0.00 0.00 0.00 1.94
2825 2964 5.920273 AGACATTCCACAGCGTTTATTTTTG 59.080 36.000 0.00 0.00 0.00 2.44
2826 2965 5.596845 ACATTCCACAGCGTTTATTTTTGT 58.403 33.333 0.00 0.00 0.00 2.83
2827 2966 6.045955 ACATTCCACAGCGTTTATTTTTGTT 58.954 32.000 0.00 0.00 0.00 2.83
2828 2967 5.957910 TTCCACAGCGTTTATTTTTGTTG 57.042 34.783 0.00 0.00 0.00 3.33
2829 2968 5.000012 TCCACAGCGTTTATTTTTGTTGT 58.000 34.783 0.00 0.00 0.00 3.32
2830 2969 5.411781 TCCACAGCGTTTATTTTTGTTGTT 58.588 33.333 0.00 0.00 0.00 2.83
2831 2970 5.289675 TCCACAGCGTTTATTTTTGTTGTTG 59.710 36.000 0.00 0.00 0.00 3.33
2832 2971 5.062809 CCACAGCGTTTATTTTTGTTGTTGT 59.937 36.000 0.00 0.00 0.00 3.32
2833 2972 6.253727 CCACAGCGTTTATTTTTGTTGTTGTA 59.746 34.615 0.00 0.00 0.00 2.41
2834 2973 7.326645 CACAGCGTTTATTTTTGTTGTTGTAG 58.673 34.615 0.00 0.00 0.00 2.74
2835 2974 7.008810 CACAGCGTTTATTTTTGTTGTTGTAGT 59.991 33.333 0.00 0.00 0.00 2.73
2836 2975 7.008810 ACAGCGTTTATTTTTGTTGTTGTAGTG 59.991 33.333 0.00 0.00 0.00 2.74
2837 2976 7.008810 CAGCGTTTATTTTTGTTGTTGTAGTGT 59.991 33.333 0.00 0.00 0.00 3.55
2838 2977 7.542824 AGCGTTTATTTTTGTTGTTGTAGTGTT 59.457 29.630 0.00 0.00 0.00 3.32
2839 2978 8.163516 GCGTTTATTTTTGTTGTTGTAGTGTTT 58.836 29.630 0.00 0.00 0.00 2.83
2840 2979 9.664826 CGTTTATTTTTGTTGTTGTAGTGTTTC 57.335 29.630 0.00 0.00 0.00 2.78
2843 2982 7.589574 ATTTTTGTTGTTGTAGTGTTTCACC 57.410 32.000 0.00 0.00 34.49 4.02
2844 2983 4.705337 TTGTTGTTGTAGTGTTTCACCC 57.295 40.909 0.00 0.00 34.49 4.61
2845 2984 3.018149 TGTTGTTGTAGTGTTTCACCCC 58.982 45.455 0.00 0.00 34.49 4.95
2846 2985 3.284617 GTTGTTGTAGTGTTTCACCCCT 58.715 45.455 0.00 0.00 34.49 4.79
2847 2986 2.925724 TGTTGTAGTGTTTCACCCCTG 58.074 47.619 0.00 0.00 34.49 4.45
2848 2987 2.506231 TGTTGTAGTGTTTCACCCCTGA 59.494 45.455 0.00 0.00 34.49 3.86
2849 2988 3.137544 TGTTGTAGTGTTTCACCCCTGAT 59.862 43.478 0.00 0.00 34.49 2.90
2850 2989 3.695830 TGTAGTGTTTCACCCCTGATC 57.304 47.619 0.00 0.00 34.49 2.92
2851 2990 3.248024 TGTAGTGTTTCACCCCTGATCT 58.752 45.455 0.00 0.00 34.49 2.75
2852 2991 3.260884 TGTAGTGTTTCACCCCTGATCTC 59.739 47.826 0.00 0.00 34.49 2.75
2853 2992 2.338809 AGTGTTTCACCCCTGATCTCA 58.661 47.619 0.00 0.00 34.49 3.27
2854 2993 2.304180 AGTGTTTCACCCCTGATCTCAG 59.696 50.000 0.00 0.00 38.17 3.35
2855 2994 1.003580 TGTTTCACCCCTGATCTCAGC 59.996 52.381 1.51 0.00 42.47 4.26
2856 2995 0.250234 TTTCACCCCTGATCTCAGCG 59.750 55.000 1.51 0.00 42.47 5.18
2857 2996 0.904865 TTCACCCCTGATCTCAGCGT 60.905 55.000 1.51 0.00 42.47 5.07
2858 2997 1.153489 CACCCCTGATCTCAGCGTG 60.153 63.158 1.51 6.49 42.47 5.34
2859 2998 1.305297 ACCCCTGATCTCAGCGTGA 60.305 57.895 1.51 0.00 42.47 4.35
2860 2999 0.689080 ACCCCTGATCTCAGCGTGAT 60.689 55.000 1.51 0.00 42.47 3.06
2861 3000 1.332195 CCCCTGATCTCAGCGTGATA 58.668 55.000 1.51 0.00 42.47 2.15
2862 3001 1.688735 CCCCTGATCTCAGCGTGATAA 59.311 52.381 1.51 0.00 42.47 1.75
2863 3002 2.546795 CCCCTGATCTCAGCGTGATAAC 60.547 54.545 1.51 0.00 42.47 1.89
2864 3003 2.101415 CCCTGATCTCAGCGTGATAACA 59.899 50.000 1.51 0.00 42.47 2.41
2865 3004 3.244009 CCCTGATCTCAGCGTGATAACAT 60.244 47.826 1.51 0.00 42.47 2.71
2866 3005 3.986572 CCTGATCTCAGCGTGATAACATC 59.013 47.826 1.51 0.00 42.47 3.06
2867 3006 4.261952 CCTGATCTCAGCGTGATAACATCT 60.262 45.833 1.51 0.00 42.47 2.90
2868 3007 4.614946 TGATCTCAGCGTGATAACATCTG 58.385 43.478 0.00 0.00 33.80 2.90
2869 3008 2.814269 TCTCAGCGTGATAACATCTGC 58.186 47.619 0.00 0.00 33.12 4.26
2870 3009 1.520174 CTCAGCGTGATAACATCTGCG 59.480 52.381 0.00 0.00 36.77 5.18
2871 3010 1.134175 TCAGCGTGATAACATCTGCGA 59.866 47.619 0.00 3.09 36.77 5.10
2872 3011 1.520174 CAGCGTGATAACATCTGCGAG 59.480 52.381 0.00 0.00 36.77 5.03
2873 3012 0.855349 GCGTGATAACATCTGCGAGG 59.145 55.000 0.00 0.00 32.95 4.63
2874 3013 1.536072 GCGTGATAACATCTGCGAGGA 60.536 52.381 0.00 0.00 32.95 3.71
2875 3014 2.864097 GCGTGATAACATCTGCGAGGAT 60.864 50.000 0.00 0.00 32.95 3.24
2876 3015 3.611766 GCGTGATAACATCTGCGAGGATA 60.612 47.826 0.00 0.00 32.95 2.59
2877 3016 4.738124 CGTGATAACATCTGCGAGGATAT 58.262 43.478 0.00 0.00 32.95 1.63
2878 3017 5.164233 CGTGATAACATCTGCGAGGATATT 58.836 41.667 0.00 0.00 32.95 1.28
2879 3018 5.635280 CGTGATAACATCTGCGAGGATATTT 59.365 40.000 0.00 0.00 32.95 1.40
2880 3019 6.146184 CGTGATAACATCTGCGAGGATATTTT 59.854 38.462 0.00 0.00 32.95 1.82
2881 3020 7.307396 CGTGATAACATCTGCGAGGATATTTTT 60.307 37.037 0.00 0.00 32.95 1.94
2882 3021 8.988934 GTGATAACATCTGCGAGGATATTTTTA 58.011 33.333 0.00 0.00 0.00 1.52
2883 3022 9.208022 TGATAACATCTGCGAGGATATTTTTAG 57.792 33.333 0.00 0.00 0.00 1.85
2884 3023 9.424319 GATAACATCTGCGAGGATATTTTTAGA 57.576 33.333 0.00 0.00 0.00 2.10
2885 3024 9.778741 ATAACATCTGCGAGGATATTTTTAGAA 57.221 29.630 0.00 0.00 0.00 2.10
2886 3025 7.721286 ACATCTGCGAGGATATTTTTAGAAG 57.279 36.000 0.00 0.00 0.00 2.85
2887 3026 7.500992 ACATCTGCGAGGATATTTTTAGAAGA 58.499 34.615 0.00 0.00 0.00 2.87
2888 3027 7.655328 ACATCTGCGAGGATATTTTTAGAAGAG 59.345 37.037 0.00 0.00 0.00 2.85
2889 3028 7.348080 TCTGCGAGGATATTTTTAGAAGAGA 57.652 36.000 0.00 0.00 0.00 3.10
2890 3029 7.957002 TCTGCGAGGATATTTTTAGAAGAGAT 58.043 34.615 0.00 0.00 0.00 2.75
2891 3030 8.424918 TCTGCGAGGATATTTTTAGAAGAGATT 58.575 33.333 0.00 0.00 0.00 2.40
2892 3031 8.370493 TGCGAGGATATTTTTAGAAGAGATTG 57.630 34.615 0.00 0.00 0.00 2.67
2893 3032 7.041780 TGCGAGGATATTTTTAGAAGAGATTGC 60.042 37.037 0.00 0.00 0.00 3.56
2894 3033 7.172361 GCGAGGATATTTTTAGAAGAGATTGCT 59.828 37.037 0.00 0.00 0.00 3.91
2895 3034 9.698309 CGAGGATATTTTTAGAAGAGATTGCTA 57.302 33.333 0.00 0.00 0.00 3.49
2911 3050 4.652421 TTGCTATACAATTGGGTGCATG 57.348 40.909 10.83 0.00 31.73 4.06
2912 3051 3.895998 TGCTATACAATTGGGTGCATGA 58.104 40.909 10.83 0.00 0.00 3.07
2913 3052 3.631686 TGCTATACAATTGGGTGCATGAC 59.368 43.478 10.83 0.00 0.00 3.06
2914 3053 3.631686 GCTATACAATTGGGTGCATGACA 59.368 43.478 10.83 0.00 0.00 3.58
2915 3054 8.286759 TTGCTATACAATTGGGTGCATGACAC 62.287 42.308 10.83 10.63 40.15 3.67
2926 3065 3.183793 TGCATGACACAGTATAGGCTG 57.816 47.619 0.00 0.00 41.92 4.85
2927 3066 2.765699 TGCATGACACAGTATAGGCTGA 59.234 45.455 0.00 0.00 39.62 4.26
2928 3067 3.126831 GCATGACACAGTATAGGCTGAC 58.873 50.000 0.00 0.00 39.62 3.51
2929 3068 3.430790 GCATGACACAGTATAGGCTGACA 60.431 47.826 0.00 0.00 39.62 3.58
2930 3069 3.868757 TGACACAGTATAGGCTGACAC 57.131 47.619 0.00 0.00 39.62 3.67
2931 3070 3.161866 TGACACAGTATAGGCTGACACA 58.838 45.455 0.00 0.00 39.62 3.72
2932 3071 3.769300 TGACACAGTATAGGCTGACACAT 59.231 43.478 0.00 0.00 39.62 3.21
2933 3072 4.222810 TGACACAGTATAGGCTGACACATT 59.777 41.667 0.00 0.00 39.62 2.71
2934 3073 5.420739 TGACACAGTATAGGCTGACACATTA 59.579 40.000 0.00 0.00 39.62 1.90
2935 3074 5.661458 ACACAGTATAGGCTGACACATTAC 58.339 41.667 0.00 0.00 39.62 1.89
2936 3075 4.740205 CACAGTATAGGCTGACACATTACG 59.260 45.833 0.00 0.00 39.62 3.18
2937 3076 4.643334 ACAGTATAGGCTGACACATTACGA 59.357 41.667 0.00 0.00 39.62 3.43
2938 3077 5.126545 ACAGTATAGGCTGACACATTACGAA 59.873 40.000 0.00 0.00 39.62 3.85
2939 3078 6.040247 CAGTATAGGCTGACACATTACGAAA 58.960 40.000 0.00 0.00 38.70 3.46
2940 3079 6.533723 CAGTATAGGCTGACACATTACGAAAA 59.466 38.462 0.00 0.00 38.70 2.29
2941 3080 7.224753 CAGTATAGGCTGACACATTACGAAAAT 59.775 37.037 0.00 0.00 38.70 1.82
2942 3081 7.769044 AGTATAGGCTGACACATTACGAAAATT 59.231 33.333 0.00 0.00 0.00 1.82
2943 3082 5.046910 AGGCTGACACATTACGAAAATTG 57.953 39.130 0.00 0.00 0.00 2.32
2944 3083 3.608073 GGCTGACACATTACGAAAATTGC 59.392 43.478 0.00 0.00 0.00 3.56
2945 3084 4.475944 GCTGACACATTACGAAAATTGCT 58.524 39.130 0.00 0.00 0.00 3.91
2946 3085 4.917415 GCTGACACATTACGAAAATTGCTT 59.083 37.500 0.00 0.00 0.00 3.91
2947 3086 5.402270 GCTGACACATTACGAAAATTGCTTT 59.598 36.000 0.00 0.00 0.00 3.51
2948 3087 6.074356 GCTGACACATTACGAAAATTGCTTTT 60.074 34.615 0.00 0.00 37.28 2.27
2949 3088 7.159437 TGACACATTACGAAAATTGCTTTTG 57.841 32.000 0.00 0.00 34.73 2.44
2950 3089 6.199908 TGACACATTACGAAAATTGCTTTTGG 59.800 34.615 0.00 0.00 34.73 3.28
2951 3090 6.276847 ACACATTACGAAAATTGCTTTTGGA 58.723 32.000 0.00 0.00 34.73 3.53
2952 3091 6.420604 ACACATTACGAAAATTGCTTTTGGAG 59.579 34.615 0.00 0.00 34.73 3.86
2953 3092 5.925969 ACATTACGAAAATTGCTTTTGGAGG 59.074 36.000 0.00 0.00 34.73 4.30
2954 3093 2.754472 ACGAAAATTGCTTTTGGAGGC 58.246 42.857 0.00 0.00 34.73 4.70
2955 3094 2.365293 ACGAAAATTGCTTTTGGAGGCT 59.635 40.909 0.00 0.00 34.73 4.58
2956 3095 2.733026 CGAAAATTGCTTTTGGAGGCTG 59.267 45.455 0.00 0.00 34.73 4.85
2957 3096 3.552684 CGAAAATTGCTTTTGGAGGCTGA 60.553 43.478 0.00 0.00 34.73 4.26
2958 3097 3.672767 AAATTGCTTTTGGAGGCTGAG 57.327 42.857 0.00 0.00 0.00 3.35
2959 3098 0.893447 ATTGCTTTTGGAGGCTGAGC 59.107 50.000 0.00 0.00 0.00 4.26
2960 3099 0.178981 TTGCTTTTGGAGGCTGAGCT 60.179 50.000 3.72 0.00 34.56 4.09
2961 3100 0.607489 TGCTTTTGGAGGCTGAGCTC 60.607 55.000 6.82 6.82 34.56 4.09
2962 3101 1.311651 GCTTTTGGAGGCTGAGCTCC 61.312 60.000 12.15 10.04 40.05 4.70
2963 3102 0.037303 CTTTTGGAGGCTGAGCTCCA 59.963 55.000 17.69 17.69 46.84 3.86
2966 3105 2.831859 TGGAGGCTGAGCTCCATAG 58.168 57.895 17.69 2.92 44.02 2.23
2967 3106 0.262876 TGGAGGCTGAGCTCCATAGA 59.737 55.000 17.69 0.64 44.02 1.98
2968 3107 0.968405 GGAGGCTGAGCTCCATAGAG 59.032 60.000 12.15 2.09 43.57 2.43
2969 3108 0.968405 GAGGCTGAGCTCCATAGAGG 59.032 60.000 12.15 0.00 40.79 3.69
2970 3109 1.120795 AGGCTGAGCTCCATAGAGGC 61.121 60.000 12.15 13.58 40.79 4.70
2971 3110 1.370810 GCTGAGCTCCATAGAGGCC 59.629 63.158 12.15 0.00 40.79 5.19
2972 3111 1.120795 GCTGAGCTCCATAGAGGCCT 61.121 60.000 3.86 3.86 40.79 5.19
2973 3112 0.968405 CTGAGCTCCATAGAGGCCTC 59.032 60.000 26.22 26.22 40.79 4.70
2974 3113 0.560193 TGAGCTCCATAGAGGCCTCT 59.440 55.000 36.62 36.62 40.79 3.69
2975 3114 1.062581 TGAGCTCCATAGAGGCCTCTT 60.063 52.381 39.23 23.53 40.79 2.85
2976 3115 2.046292 GAGCTCCATAGAGGCCTCTTT 58.954 52.381 39.23 28.99 40.79 2.52
2977 3116 2.437651 GAGCTCCATAGAGGCCTCTTTT 59.562 50.000 39.23 24.27 40.79 2.27
2978 3117 2.849318 AGCTCCATAGAGGCCTCTTTTT 59.151 45.455 39.23 21.75 40.79 1.94
2979 3118 2.948315 GCTCCATAGAGGCCTCTTTTTG 59.052 50.000 39.23 29.71 40.79 2.44
2980 3119 2.948315 CTCCATAGAGGCCTCTTTTTGC 59.052 50.000 39.23 9.15 40.93 3.68
2981 3120 2.308570 TCCATAGAGGCCTCTTTTTGCA 59.691 45.455 39.23 21.48 40.93 4.08
2982 3121 3.091545 CCATAGAGGCCTCTTTTTGCAA 58.908 45.455 39.23 20.70 40.93 4.08
2983 3122 3.511146 CCATAGAGGCCTCTTTTTGCAAA 59.489 43.478 39.23 19.92 40.93 3.68
2984 3123 4.021192 CCATAGAGGCCTCTTTTTGCAAAA 60.021 41.667 39.23 20.46 40.93 2.44
2985 3124 5.337813 CCATAGAGGCCTCTTTTTGCAAAAT 60.338 40.000 39.23 20.56 40.93 1.82
2986 3125 4.694760 AGAGGCCTCTTTTTGCAAAATT 57.305 36.364 30.40 2.58 36.31 1.82
2987 3126 4.635223 AGAGGCCTCTTTTTGCAAAATTC 58.365 39.130 30.40 13.00 36.31 2.17
2988 3127 4.101430 AGAGGCCTCTTTTTGCAAAATTCA 59.899 37.500 30.40 9.79 36.31 2.57
2989 3128 4.779696 AGGCCTCTTTTTGCAAAATTCAA 58.220 34.783 24.39 9.44 0.00 2.69
2990 3129 5.192176 AGGCCTCTTTTTGCAAAATTCAAA 58.808 33.333 24.39 9.07 0.00 2.69
2991 3130 5.066375 AGGCCTCTTTTTGCAAAATTCAAAC 59.934 36.000 24.39 13.89 33.66 2.93
2992 3131 5.066375 GGCCTCTTTTTGCAAAATTCAAACT 59.934 36.000 24.39 0.00 33.66 2.66
2993 3132 6.404623 GGCCTCTTTTTGCAAAATTCAAACTT 60.405 34.615 24.39 0.00 33.66 2.66
2994 3133 6.688385 GCCTCTTTTTGCAAAATTCAAACTTC 59.312 34.615 24.39 5.58 33.66 3.01
2995 3134 7.626028 GCCTCTTTTTGCAAAATTCAAACTTCA 60.626 33.333 24.39 5.54 33.66 3.02
2996 3135 8.400186 CCTCTTTTTGCAAAATTCAAACTTCAT 58.600 29.630 24.39 0.00 33.66 2.57
2997 3136 9.777575 CTCTTTTTGCAAAATTCAAACTTCATT 57.222 25.926 24.39 0.00 33.66 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
517 518 3.699038 TGCCTGCTCCCATAATGTTAAAC 59.301 43.478 0.00 0.00 0.00 2.01
556 559 6.018343 CCTCCAATCTTATCTTCTTTCGCTTC 60.018 42.308 0.00 0.00 0.00 3.86
691 695 2.438434 CCCCGTCCAATCAGGCAC 60.438 66.667 0.00 0.00 37.29 5.01
695 699 1.915078 AAGCCTCCCCGTCCAATCAG 61.915 60.000 0.00 0.00 0.00 2.90
1000 1041 9.809096 CTTATTTGGCAGATACTCGTATATCAT 57.191 33.333 0.00 0.00 34.50 2.45
1113 1163 7.745620 ATTTTCTCGACTCACCTAAAAACAT 57.254 32.000 0.00 0.00 0.00 2.71
1123 1173 4.214437 CAACAGCAATTTTCTCGACTCAC 58.786 43.478 0.00 0.00 0.00 3.51
1218 1268 5.012458 TGAGGCCTCTATGAATTATGGTGAG 59.988 44.000 32.28 0.00 0.00 3.51
1237 1287 2.159327 AACATTTGCAGCTTTGAGGC 57.841 45.000 0.00 0.00 0.00 4.70
1576 1666 4.589374 ACATATACTGTGAGGCTAGGGAAC 59.411 45.833 0.00 0.00 36.48 3.62
1763 1881 9.258826 CAGAATTTCATCTGGTGAAGTATCTAG 57.741 37.037 3.27 2.19 46.85 2.43
1878 1996 1.338769 GGGATGTAAGTGGCGTGTTCT 60.339 52.381 0.00 0.00 0.00 3.01
1881 2011 1.298667 GGGGATGTAAGTGGCGTGT 59.701 57.895 0.00 0.00 0.00 4.49
1885 2015 1.215423 AGATTGGGGGATGTAAGTGGC 59.785 52.381 0.00 0.00 0.00 5.01
1964 2094 3.746492 AGAGTAAAACTGTTCACGGATGC 59.254 43.478 0.00 0.00 0.00 3.91
2039 2171 9.851686 ATGTATTGTTTCCTTCAAGAGCATATA 57.148 29.630 0.00 0.00 0.00 0.86
2040 2172 8.757982 ATGTATTGTTTCCTTCAAGAGCATAT 57.242 30.769 0.00 0.00 0.00 1.78
2041 2173 8.579850 AATGTATTGTTTCCTTCAAGAGCATA 57.420 30.769 0.00 0.00 0.00 3.14
2124 2260 9.729281 ACGGTACATCCTTATTTTCTTTCTTAA 57.271 29.630 0.00 0.00 0.00 1.85
2131 2269 5.801380 ACACACGGTACATCCTTATTTTCT 58.199 37.500 0.00 0.00 0.00 2.52
2139 2277 0.321298 GGCAACACACGGTACATCCT 60.321 55.000 0.00 0.00 0.00 3.24
2147 2285 1.577328 CTAGGCAAGGCAACACACGG 61.577 60.000 0.00 0.00 41.41 4.94
2160 2298 0.333993 AACGGAGGGAGTACTAGGCA 59.666 55.000 0.00 0.00 0.00 4.75
2161 2299 1.031235 GAACGGAGGGAGTACTAGGC 58.969 60.000 0.00 0.00 0.00 3.93
2162 2300 1.214923 AGGAACGGAGGGAGTACTAGG 59.785 57.143 0.00 0.00 0.00 3.02
2163 2301 2.732844 AGGAACGGAGGGAGTACTAG 57.267 55.000 0.00 0.00 0.00 2.57
2188 2326 8.536175 ACTTGTTGAAATCCCTAAAAAGACAAA 58.464 29.630 0.00 0.00 0.00 2.83
2194 2332 7.488322 CAGTCACTTGTTGAAATCCCTAAAAA 58.512 34.615 0.00 0.00 35.39 1.94
2195 2333 6.460953 GCAGTCACTTGTTGAAATCCCTAAAA 60.461 38.462 0.00 0.00 35.39 1.52
2196 2334 5.009610 GCAGTCACTTGTTGAAATCCCTAAA 59.990 40.000 0.00 0.00 35.39 1.85
2197 2335 4.518970 GCAGTCACTTGTTGAAATCCCTAA 59.481 41.667 0.00 0.00 35.39 2.69
2198 2336 4.072131 GCAGTCACTTGTTGAAATCCCTA 58.928 43.478 0.00 0.00 35.39 3.53
2199 2337 2.887152 GCAGTCACTTGTTGAAATCCCT 59.113 45.455 0.00 0.00 35.39 4.20
2200 2338 2.622942 TGCAGTCACTTGTTGAAATCCC 59.377 45.455 0.00 0.00 35.39 3.85
2201 2339 3.988379 TGCAGTCACTTGTTGAAATCC 57.012 42.857 0.00 0.00 35.39 3.01
2202 2340 5.082059 CGTATGCAGTCACTTGTTGAAATC 58.918 41.667 0.00 0.00 35.39 2.17
2203 2341 4.083324 CCGTATGCAGTCACTTGTTGAAAT 60.083 41.667 0.00 0.00 35.39 2.17
2204 2342 3.249799 CCGTATGCAGTCACTTGTTGAAA 59.750 43.478 0.00 0.00 35.39 2.69
2205 2343 2.805671 CCGTATGCAGTCACTTGTTGAA 59.194 45.455 0.00 0.00 35.39 2.69
2206 2344 2.036604 TCCGTATGCAGTCACTTGTTGA 59.963 45.455 0.00 0.00 0.00 3.18
2207 2345 2.412870 TCCGTATGCAGTCACTTGTTG 58.587 47.619 0.00 0.00 0.00 3.33
2208 2346 2.688507 CTCCGTATGCAGTCACTTGTT 58.311 47.619 0.00 0.00 0.00 2.83
2209 2347 1.673033 GCTCCGTATGCAGTCACTTGT 60.673 52.381 0.00 0.00 0.00 3.16
2210 2348 1.002366 GCTCCGTATGCAGTCACTTG 58.998 55.000 0.00 0.00 0.00 3.16
2211 2349 0.608130 TGCTCCGTATGCAGTCACTT 59.392 50.000 0.00 0.00 35.31 3.16
2212 2350 0.608130 TTGCTCCGTATGCAGTCACT 59.392 50.000 0.00 0.00 41.71 3.41
2213 2351 0.721718 GTTGCTCCGTATGCAGTCAC 59.278 55.000 0.00 0.00 41.71 3.67
2214 2352 0.320050 TGTTGCTCCGTATGCAGTCA 59.680 50.000 0.00 0.00 41.71 3.41
2215 2353 1.328680 CATGTTGCTCCGTATGCAGTC 59.671 52.381 0.00 0.00 41.71 3.51
2216 2354 1.066215 TCATGTTGCTCCGTATGCAGT 60.066 47.619 0.00 0.00 41.71 4.40
2217 2355 1.596260 CTCATGTTGCTCCGTATGCAG 59.404 52.381 0.00 0.00 41.71 4.41
2218 2356 1.066215 ACTCATGTTGCTCCGTATGCA 60.066 47.619 0.00 0.00 38.80 3.96
2219 2357 1.328680 CACTCATGTTGCTCCGTATGC 59.671 52.381 0.00 0.00 0.00 3.14
2220 2358 2.892374 TCACTCATGTTGCTCCGTATG 58.108 47.619 0.00 0.00 0.00 2.39
2221 2359 3.610040 TTCACTCATGTTGCTCCGTAT 57.390 42.857 0.00 0.00 0.00 3.06
2222 2360 3.195610 AGATTCACTCATGTTGCTCCGTA 59.804 43.478 0.00 0.00 0.00 4.02
2223 2361 2.027745 AGATTCACTCATGTTGCTCCGT 60.028 45.455 0.00 0.00 0.00 4.69
2224 2362 2.625737 AGATTCACTCATGTTGCTCCG 58.374 47.619 0.00 0.00 0.00 4.63
2225 2363 4.507710 TGTAGATTCACTCATGTTGCTCC 58.492 43.478 0.00 0.00 0.00 4.70
2226 2364 6.538021 AGAATGTAGATTCACTCATGTTGCTC 59.462 38.462 14.46 0.00 40.59 4.26
2227 2365 6.413052 AGAATGTAGATTCACTCATGTTGCT 58.587 36.000 14.46 0.00 40.59 3.91
2228 2366 6.674694 AGAATGTAGATTCACTCATGTTGC 57.325 37.500 14.46 0.00 40.59 4.17
2272 2410 7.989741 AGAGATTTCAAAGGACTACCACATATG 59.010 37.037 0.00 0.00 38.94 1.78
2273 2411 8.095452 AGAGATTTCAAAGGACTACCACATAT 57.905 34.615 0.00 0.00 38.94 1.78
2274 2412 7.496346 AGAGATTTCAAAGGACTACCACATA 57.504 36.000 0.00 0.00 38.94 2.29
2275 2413 6.380079 AGAGATTTCAAAGGACTACCACAT 57.620 37.500 0.00 0.00 38.94 3.21
2276 2414 5.825593 AGAGATTTCAAAGGACTACCACA 57.174 39.130 0.00 0.00 38.94 4.17
2277 2415 8.617290 TTTTAGAGATTTCAAAGGACTACCAC 57.383 34.615 0.00 0.00 38.94 4.16
2301 2439 7.452189 TCCCTCCGTTCCTAAATATTTGTTTTT 59.548 33.333 11.05 0.00 0.00 1.94
2302 2440 6.949463 TCCCTCCGTTCCTAAATATTTGTTTT 59.051 34.615 11.05 0.00 0.00 2.43
2303 2441 6.486941 TCCCTCCGTTCCTAAATATTTGTTT 58.513 36.000 11.05 0.00 0.00 2.83
2304 2442 6.069705 TCCCTCCGTTCCTAAATATTTGTT 57.930 37.500 11.05 0.00 0.00 2.83
2305 2443 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
2306 2444 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
2307 2445 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
2308 2446 6.141790 ACTACTCCCTCCGTTCCTAAATATT 58.858 40.000 0.00 0.00 0.00 1.28
2309 2447 5.713807 ACTACTCCCTCCGTTCCTAAATAT 58.286 41.667 0.00 0.00 0.00 1.28
2310 2448 5.134725 ACTACTCCCTCCGTTCCTAAATA 57.865 43.478 0.00 0.00 0.00 1.40
2311 2449 3.959449 GACTACTCCCTCCGTTCCTAAAT 59.041 47.826 0.00 0.00 0.00 1.40
2312 2450 3.245371 TGACTACTCCCTCCGTTCCTAAA 60.245 47.826 0.00 0.00 0.00 1.85
2313 2451 2.309755 TGACTACTCCCTCCGTTCCTAA 59.690 50.000 0.00 0.00 0.00 2.69
2314 2452 1.918262 TGACTACTCCCTCCGTTCCTA 59.082 52.381 0.00 0.00 0.00 2.94
2315 2453 0.702902 TGACTACTCCCTCCGTTCCT 59.297 55.000 0.00 0.00 0.00 3.36
2316 2454 1.777941 ATGACTACTCCCTCCGTTCC 58.222 55.000 0.00 0.00 0.00 3.62
2317 2455 4.828387 AGATAATGACTACTCCCTCCGTTC 59.172 45.833 0.00 0.00 0.00 3.95
2318 2456 4.805744 AGATAATGACTACTCCCTCCGTT 58.194 43.478 0.00 0.00 0.00 4.44
2319 2457 4.456662 AGATAATGACTACTCCCTCCGT 57.543 45.455 0.00 0.00 0.00 4.69
2320 2458 5.302059 TCAAAGATAATGACTACTCCCTCCG 59.698 44.000 0.00 0.00 0.00 4.63
2321 2459 6.325286 ACTCAAAGATAATGACTACTCCCTCC 59.675 42.308 0.00 0.00 0.00 4.30
2322 2460 7.354751 ACTCAAAGATAATGACTACTCCCTC 57.645 40.000 0.00 0.00 0.00 4.30
2323 2461 8.865090 CATACTCAAAGATAATGACTACTCCCT 58.135 37.037 0.00 0.00 0.00 4.20
2324 2462 8.643324 ACATACTCAAAGATAATGACTACTCCC 58.357 37.037 0.00 0.00 0.00 4.30
2374 2512 7.471041 ACAGAGTGAGGGAGCAGTATATTATA 58.529 38.462 0.00 0.00 0.00 0.98
2392 2530 7.795129 AACACTCTTATGTTATGGGACAGAGTG 60.795 40.741 19.88 19.88 45.81 3.51
2415 2553 5.155278 ACGGTATACCAATCACAGAAACA 57.845 39.130 21.76 0.00 35.14 2.83
2424 2562 3.545426 GCGCTTTTGACGGTATACCAATC 60.545 47.826 21.76 17.42 35.14 2.67
2438 2576 6.603095 GTCCCATAATATAAGAGCGCTTTTG 58.397 40.000 22.35 5.08 35.56 2.44
2443 2581 3.119245 TCCGTCCCATAATATAAGAGCGC 60.119 47.826 0.00 0.00 0.00 5.92
2458 2596 0.324091 TCAAGTACTCCCTCCGTCCC 60.324 60.000 0.00 0.00 0.00 4.46
2474 2612 6.423182 TCTTTCAGAGTCCTTCCTTTTTCAA 58.577 36.000 0.00 0.00 0.00 2.69
2534 2672 6.435292 AGAACACTACCACCTGATTACTTT 57.565 37.500 0.00 0.00 0.00 2.66
2539 2677 4.348168 AGACAAGAACACTACCACCTGATT 59.652 41.667 0.00 0.00 0.00 2.57
2542 2680 3.393800 CAGACAAGAACACTACCACCTG 58.606 50.000 0.00 0.00 0.00 4.00
2547 2685 3.669251 AGAGCAGACAAGAACACTACC 57.331 47.619 0.00 0.00 0.00 3.18
2571 2709 5.729510 ACAAGTAAACACAAAACCATTGCT 58.270 33.333 0.00 0.00 0.00 3.91
2692 2831 0.978146 ATCCTTGTCCCTCCTCCGTG 60.978 60.000 0.00 0.00 0.00 4.94
2693 2832 0.252742 AATCCTTGTCCCTCCTCCGT 60.253 55.000 0.00 0.00 0.00 4.69
2694 2833 0.912486 AAATCCTTGTCCCTCCTCCG 59.088 55.000 0.00 0.00 0.00 4.63
2695 2834 2.200955 AGAAATCCTTGTCCCTCCTCC 58.799 52.381 0.00 0.00 0.00 4.30
2696 2835 4.013050 CAAAGAAATCCTTGTCCCTCCTC 58.987 47.826 0.00 0.00 34.79 3.71
2697 2836 3.245407 CCAAAGAAATCCTTGTCCCTCCT 60.245 47.826 0.00 0.00 34.79 3.69
2698 2837 3.092301 CCAAAGAAATCCTTGTCCCTCC 58.908 50.000 0.00 0.00 34.79 4.30
2699 2838 3.092301 CCCAAAGAAATCCTTGTCCCTC 58.908 50.000 0.00 0.00 34.79 4.30
2700 2839 2.721906 TCCCAAAGAAATCCTTGTCCCT 59.278 45.455 0.00 0.00 34.79 4.20
2701 2840 3.169512 TCCCAAAGAAATCCTTGTCCC 57.830 47.619 0.00 0.00 34.79 4.46
2702 2841 5.482006 CAAATCCCAAAGAAATCCTTGTCC 58.518 41.667 0.00 0.00 34.79 4.02
2703 2842 5.482006 CCAAATCCCAAAGAAATCCTTGTC 58.518 41.667 0.00 0.00 34.79 3.18
2704 2843 4.286808 CCCAAATCCCAAAGAAATCCTTGT 59.713 41.667 0.00 0.00 34.79 3.16
2705 2844 4.323715 CCCCAAATCCCAAAGAAATCCTTG 60.324 45.833 0.00 0.00 34.79 3.61
2706 2845 3.845992 CCCCAAATCCCAAAGAAATCCTT 59.154 43.478 0.00 0.00 36.47 3.36
2707 2846 3.078918 TCCCCAAATCCCAAAGAAATCCT 59.921 43.478 0.00 0.00 0.00 3.24
2708 2847 3.449918 TCCCCAAATCCCAAAGAAATCC 58.550 45.455 0.00 0.00 0.00 3.01
2709 2848 5.698741 AATCCCCAAATCCCAAAGAAATC 57.301 39.130 0.00 0.00 0.00 2.17
2710 2849 5.551189 TGAAATCCCCAAATCCCAAAGAAAT 59.449 36.000 0.00 0.00 0.00 2.17
2711 2850 4.910304 TGAAATCCCCAAATCCCAAAGAAA 59.090 37.500 0.00 0.00 0.00 2.52
2712 2851 4.497516 TGAAATCCCCAAATCCCAAAGAA 58.502 39.130 0.00 0.00 0.00 2.52
2713 2852 4.139162 TGAAATCCCCAAATCCCAAAGA 57.861 40.909 0.00 0.00 0.00 2.52
2714 2853 5.027293 GATGAAATCCCCAAATCCCAAAG 57.973 43.478 0.00 0.00 37.38 2.77
2728 2867 0.247814 CACAGCACGCGGATGAAATC 60.248 55.000 17.52 0.00 44.55 2.17
2729 2868 1.647545 CCACAGCACGCGGATGAAAT 61.648 55.000 17.52 0.00 36.11 2.17
2730 2869 2.324330 CCACAGCACGCGGATGAAA 61.324 57.895 17.52 0.00 36.11 2.69
2731 2870 2.741985 CCACAGCACGCGGATGAA 60.742 61.111 17.52 0.00 36.11 2.57
2732 2871 3.647649 CTCCACAGCACGCGGATGA 62.648 63.158 17.52 1.07 36.11 2.92
2733 2872 2.913054 ATCTCCACAGCACGCGGATG 62.913 60.000 12.47 11.32 39.32 3.51
2734 2873 2.725312 ATCTCCACAGCACGCGGAT 61.725 57.895 12.47 0.00 0.00 4.18
2735 2874 3.381983 ATCTCCACAGCACGCGGA 61.382 61.111 12.47 0.00 0.00 5.54
2736 2875 3.190849 CATCTCCACAGCACGCGG 61.191 66.667 12.47 0.00 0.00 6.46
2737 2876 3.857854 GCATCTCCACAGCACGCG 61.858 66.667 3.53 3.53 0.00 6.01
2738 2877 2.743538 TGCATCTCCACAGCACGC 60.744 61.111 0.00 0.00 32.55 5.34
2741 2880 0.534877 AAACGTGCATCTCCACAGCA 60.535 50.000 0.00 0.00 35.47 4.41
2742 2881 0.593128 AAAACGTGCATCTCCACAGC 59.407 50.000 0.00 0.00 35.47 4.40
2743 2882 4.685169 ATAAAAACGTGCATCTCCACAG 57.315 40.909 0.00 0.00 35.47 3.66
2744 2883 5.446143 AAATAAAAACGTGCATCTCCACA 57.554 34.783 0.00 0.00 35.47 4.17
2745 2884 5.798434 GGTAAATAAAAACGTGCATCTCCAC 59.202 40.000 0.00 0.00 0.00 4.02
2746 2885 5.708230 AGGTAAATAAAAACGTGCATCTCCA 59.292 36.000 0.00 0.00 0.00 3.86
2747 2886 6.027749 CAGGTAAATAAAAACGTGCATCTCC 58.972 40.000 0.00 0.00 0.00 3.71
2748 2887 6.837992 TCAGGTAAATAAAAACGTGCATCTC 58.162 36.000 0.00 0.00 32.85 2.75
2749 2888 6.811253 TCAGGTAAATAAAAACGTGCATCT 57.189 33.333 0.00 0.00 32.85 2.90
2750 2889 7.302524 TCTTCAGGTAAATAAAAACGTGCATC 58.697 34.615 0.00 0.00 32.85 3.91
2751 2890 7.209471 TCTTCAGGTAAATAAAAACGTGCAT 57.791 32.000 0.00 0.00 32.85 3.96
2752 2891 6.621316 TCTTCAGGTAAATAAAAACGTGCA 57.379 33.333 0.00 0.00 32.85 4.57
2753 2892 9.274065 CTAATCTTCAGGTAAATAAAAACGTGC 57.726 33.333 0.00 0.00 32.85 5.34
2754 2893 9.274065 GCTAATCTTCAGGTAAATAAAAACGTG 57.726 33.333 0.00 0.00 33.82 4.49
2755 2894 8.456471 GGCTAATCTTCAGGTAAATAAAAACGT 58.544 33.333 0.00 0.00 0.00 3.99
2756 2895 7.638683 CGGCTAATCTTCAGGTAAATAAAAACG 59.361 37.037 0.00 0.00 0.00 3.60
2757 2896 7.431376 GCGGCTAATCTTCAGGTAAATAAAAAC 59.569 37.037 0.00 0.00 0.00 2.43
2758 2897 7.415877 GGCGGCTAATCTTCAGGTAAATAAAAA 60.416 37.037 0.00 0.00 0.00 1.94
2759 2898 6.038936 GGCGGCTAATCTTCAGGTAAATAAAA 59.961 38.462 0.00 0.00 0.00 1.52
2760 2899 5.529800 GGCGGCTAATCTTCAGGTAAATAAA 59.470 40.000 0.00 0.00 0.00 1.40
2761 2900 5.061179 GGCGGCTAATCTTCAGGTAAATAA 58.939 41.667 0.00 0.00 0.00 1.40
2762 2901 4.101898 TGGCGGCTAATCTTCAGGTAAATA 59.898 41.667 11.43 0.00 0.00 1.40
2763 2902 3.118038 TGGCGGCTAATCTTCAGGTAAAT 60.118 43.478 11.43 0.00 0.00 1.40
2764 2903 2.237643 TGGCGGCTAATCTTCAGGTAAA 59.762 45.455 11.43 0.00 0.00 2.01
2765 2904 1.834896 TGGCGGCTAATCTTCAGGTAA 59.165 47.619 11.43 0.00 0.00 2.85
2766 2905 1.491668 TGGCGGCTAATCTTCAGGTA 58.508 50.000 11.43 0.00 0.00 3.08
2767 2906 0.618458 TTGGCGGCTAATCTTCAGGT 59.382 50.000 11.43 0.00 0.00 4.00
2768 2907 1.972872 ATTGGCGGCTAATCTTCAGG 58.027 50.000 11.43 0.00 0.00 3.86
2769 2908 3.129287 ACAAATTGGCGGCTAATCTTCAG 59.871 43.478 12.13 3.90 0.00 3.02
2770 2909 3.088532 ACAAATTGGCGGCTAATCTTCA 58.911 40.909 12.13 0.00 0.00 3.02
2771 2910 3.782889 ACAAATTGGCGGCTAATCTTC 57.217 42.857 12.13 0.00 0.00 2.87
2772 2911 4.244862 CAAACAAATTGGCGGCTAATCTT 58.755 39.130 12.13 6.40 35.27 2.40
2773 2912 3.258123 ACAAACAAATTGGCGGCTAATCT 59.742 39.130 12.13 0.00 43.66 2.40
2774 2913 3.584834 ACAAACAAATTGGCGGCTAATC 58.415 40.909 12.13 0.00 43.66 1.75
2775 2914 3.676291 ACAAACAAATTGGCGGCTAAT 57.324 38.095 11.43 5.68 43.66 1.73
2776 2915 4.585955 TTACAAACAAATTGGCGGCTAA 57.414 36.364 11.43 0.00 43.66 3.09
2777 2916 4.585955 TTTACAAACAAATTGGCGGCTA 57.414 36.364 11.43 1.99 43.66 3.93
2778 2917 3.460857 TTTACAAACAAATTGGCGGCT 57.539 38.095 11.43 0.00 43.66 5.52
2779 2918 3.743396 TGATTTACAAACAAATTGGCGGC 59.257 39.130 0.00 0.00 43.66 6.53
2780 2919 5.118510 GTCTGATTTACAAACAAATTGGCGG 59.881 40.000 0.00 0.00 43.66 6.13
2781 2920 5.689514 TGTCTGATTTACAAACAAATTGGCG 59.310 36.000 0.00 0.00 43.66 5.69
2782 2921 7.656707 ATGTCTGATTTACAAACAAATTGGC 57.343 32.000 0.00 0.00 43.66 4.52
2783 2922 8.711457 GGAATGTCTGATTTACAAACAAATTGG 58.289 33.333 0.00 0.00 43.66 3.16
2784 2923 9.258826 TGGAATGTCTGATTTACAAACAAATTG 57.741 29.630 0.00 0.00 44.95 2.32
2785 2924 9.260002 GTGGAATGTCTGATTTACAAACAAATT 57.740 29.630 0.00 0.00 32.99 1.82
2786 2925 8.420222 TGTGGAATGTCTGATTTACAAACAAAT 58.580 29.630 0.00 0.00 32.99 2.32
2787 2926 7.776107 TGTGGAATGTCTGATTTACAAACAAA 58.224 30.769 0.00 0.00 32.99 2.83
2788 2927 7.340122 TGTGGAATGTCTGATTTACAAACAA 57.660 32.000 0.00 0.00 32.99 2.83
2789 2928 6.514870 GCTGTGGAATGTCTGATTTACAAACA 60.515 38.462 0.00 0.00 33.81 2.83
2790 2929 5.858581 GCTGTGGAATGTCTGATTTACAAAC 59.141 40.000 0.00 0.00 0.00 2.93
2791 2930 5.334802 CGCTGTGGAATGTCTGATTTACAAA 60.335 40.000 0.00 0.00 0.00 2.83
2792 2931 4.154015 CGCTGTGGAATGTCTGATTTACAA 59.846 41.667 0.00 0.00 0.00 2.41
2793 2932 3.684305 CGCTGTGGAATGTCTGATTTACA 59.316 43.478 0.00 0.00 0.00 2.41
2794 2933 3.684788 ACGCTGTGGAATGTCTGATTTAC 59.315 43.478 0.00 0.00 0.00 2.01
2795 2934 3.937814 ACGCTGTGGAATGTCTGATTTA 58.062 40.909 0.00 0.00 0.00 1.40
2796 2935 2.783135 ACGCTGTGGAATGTCTGATTT 58.217 42.857 0.00 0.00 0.00 2.17
2797 2936 2.479566 ACGCTGTGGAATGTCTGATT 57.520 45.000 0.00 0.00 0.00 2.57
2798 2937 2.479566 AACGCTGTGGAATGTCTGAT 57.520 45.000 0.00 0.00 0.00 2.90
2799 2938 2.254546 AAACGCTGTGGAATGTCTGA 57.745 45.000 0.00 0.00 0.00 3.27
2800 2939 4.685169 AATAAACGCTGTGGAATGTCTG 57.315 40.909 0.00 0.00 0.00 3.51
2801 2940 5.705609 AAAATAAACGCTGTGGAATGTCT 57.294 34.783 0.00 0.00 0.00 3.41
2802 2941 5.689961 ACAAAAATAAACGCTGTGGAATGTC 59.310 36.000 0.00 0.00 0.00 3.06
2803 2942 5.596845 ACAAAAATAAACGCTGTGGAATGT 58.403 33.333 0.00 0.00 0.00 2.71
2804 2943 6.019156 ACAACAAAAATAAACGCTGTGGAATG 60.019 34.615 0.00 0.00 0.00 2.67
2805 2944 6.045955 ACAACAAAAATAAACGCTGTGGAAT 58.954 32.000 0.00 0.00 0.00 3.01
2806 2945 5.411781 ACAACAAAAATAAACGCTGTGGAA 58.588 33.333 0.00 0.00 0.00 3.53
2807 2946 5.000012 ACAACAAAAATAAACGCTGTGGA 58.000 34.783 0.00 0.00 0.00 4.02
2808 2947 5.062809 ACAACAACAAAAATAAACGCTGTGG 59.937 36.000 0.00 0.00 0.00 4.17
2809 2948 6.088719 ACAACAACAAAAATAAACGCTGTG 57.911 33.333 0.00 0.00 0.00 3.66
2810 2949 7.008810 CACTACAACAACAAAAATAAACGCTGT 59.991 33.333 0.00 0.00 0.00 4.40
2811 2950 7.008810 ACACTACAACAACAAAAATAAACGCTG 59.991 33.333 0.00 0.00 0.00 5.18
2812 2951 7.030768 ACACTACAACAACAAAAATAAACGCT 58.969 30.769 0.00 0.00 0.00 5.07
2813 2952 7.212032 ACACTACAACAACAAAAATAAACGC 57.788 32.000 0.00 0.00 0.00 4.84
2814 2953 9.664826 GAAACACTACAACAACAAAAATAAACG 57.335 29.630 0.00 0.00 0.00 3.60
2817 2956 9.141400 GGTGAAACACTACAACAACAAAAATAA 57.859 29.630 0.00 0.00 39.98 1.40
2818 2957 7.760340 GGGTGAAACACTACAACAACAAAAATA 59.240 33.333 0.00 0.00 37.19 1.40
2819 2958 6.592220 GGGTGAAACACTACAACAACAAAAAT 59.408 34.615 0.00 0.00 37.19 1.82
2820 2959 5.927115 GGGTGAAACACTACAACAACAAAAA 59.073 36.000 0.00 0.00 37.19 1.94
2821 2960 5.471257 GGGTGAAACACTACAACAACAAAA 58.529 37.500 0.00 0.00 37.19 2.44
2822 2961 4.082136 GGGGTGAAACACTACAACAACAAA 60.082 41.667 0.00 0.00 42.68 2.83
2823 2962 3.444388 GGGGTGAAACACTACAACAACAA 59.556 43.478 0.00 0.00 42.68 2.83
2824 2963 3.018149 GGGGTGAAACACTACAACAACA 58.982 45.455 0.00 0.00 42.68 3.33
2825 2964 3.066203 CAGGGGTGAAACACTACAACAAC 59.934 47.826 0.00 0.00 42.68 3.32
2826 2965 3.054287 TCAGGGGTGAAACACTACAACAA 60.054 43.478 0.00 0.00 42.68 2.83
2827 2966 2.506231 TCAGGGGTGAAACACTACAACA 59.494 45.455 0.00 0.00 42.68 3.33
2828 2967 3.202829 TCAGGGGTGAAACACTACAAC 57.797 47.619 0.00 0.00 42.68 3.32
2829 2968 3.650942 AGATCAGGGGTGAAACACTACAA 59.349 43.478 0.00 0.00 42.68 2.41
2830 2969 3.248024 AGATCAGGGGTGAAACACTACA 58.752 45.455 0.00 0.00 42.68 2.74
2831 2970 3.260884 TGAGATCAGGGGTGAAACACTAC 59.739 47.826 0.00 0.00 42.68 2.73
2832 2971 3.515502 CTGAGATCAGGGGTGAAACACTA 59.484 47.826 1.70 0.00 42.68 2.74
2833 2972 2.304180 CTGAGATCAGGGGTGAAACACT 59.696 50.000 1.70 0.00 42.68 3.55
2834 2973 2.704572 CTGAGATCAGGGGTGAAACAC 58.295 52.381 1.70 0.00 41.97 3.32
2835 2974 1.003580 GCTGAGATCAGGGGTGAAACA 59.996 52.381 11.63 0.00 43.94 2.83
2836 2975 1.743996 GCTGAGATCAGGGGTGAAAC 58.256 55.000 11.63 0.00 43.94 2.78
2844 2983 3.443099 TGTTATCACGCTGAGATCAGG 57.557 47.619 11.63 4.71 43.94 3.86
2845 2984 4.680567 CAGATGTTATCACGCTGAGATCAG 59.319 45.833 5.45 5.45 46.40 2.90
2846 2985 4.614946 CAGATGTTATCACGCTGAGATCA 58.385 43.478 0.00 0.00 33.79 2.92
2847 2986 3.428198 GCAGATGTTATCACGCTGAGATC 59.572 47.826 8.81 0.00 33.79 2.75
2848 2987 3.388308 GCAGATGTTATCACGCTGAGAT 58.612 45.455 8.81 0.00 33.79 2.75
2849 2988 2.796032 CGCAGATGTTATCACGCTGAGA 60.796 50.000 8.81 0.00 34.05 3.27
2850 2989 1.520174 CGCAGATGTTATCACGCTGAG 59.480 52.381 8.81 3.47 33.79 3.35
2851 2990 1.134175 TCGCAGATGTTATCACGCTGA 59.866 47.619 8.81 0.00 33.79 4.26
2852 2991 1.520174 CTCGCAGATGTTATCACGCTG 59.480 52.381 0.00 0.00 33.89 5.18
2853 2992 1.536922 CCTCGCAGATGTTATCACGCT 60.537 52.381 0.00 0.00 33.89 5.07
2854 2993 0.855349 CCTCGCAGATGTTATCACGC 59.145 55.000 0.00 0.00 33.89 5.34
2855 2994 2.492019 TCCTCGCAGATGTTATCACG 57.508 50.000 0.00 0.00 33.89 4.35
2856 2995 7.426929 AAAATATCCTCGCAGATGTTATCAC 57.573 36.000 0.00 0.00 33.89 3.06
2857 2996 9.208022 CTAAAAATATCCTCGCAGATGTTATCA 57.792 33.333 0.00 0.00 33.89 2.15
2858 2997 9.424319 TCTAAAAATATCCTCGCAGATGTTATC 57.576 33.333 0.00 0.00 33.89 1.75
2859 2998 9.778741 TTCTAAAAATATCCTCGCAGATGTTAT 57.221 29.630 0.00 0.00 33.89 1.89
2860 2999 9.261180 CTTCTAAAAATATCCTCGCAGATGTTA 57.739 33.333 0.00 0.00 33.89 2.41
2861 3000 7.987458 TCTTCTAAAAATATCCTCGCAGATGTT 59.013 33.333 0.00 0.00 33.89 2.71
2862 3001 7.500992 TCTTCTAAAAATATCCTCGCAGATGT 58.499 34.615 0.00 0.00 33.89 3.06
2863 3002 7.869937 TCTCTTCTAAAAATATCCTCGCAGATG 59.130 37.037 0.00 0.00 33.89 2.90
2864 3003 7.957002 TCTCTTCTAAAAATATCCTCGCAGAT 58.043 34.615 0.00 0.00 33.89 2.90
2865 3004 7.348080 TCTCTTCTAAAAATATCCTCGCAGA 57.652 36.000 0.00 0.00 0.00 4.26
2866 3005 8.494347 CAATCTCTTCTAAAAATATCCTCGCAG 58.506 37.037 0.00 0.00 0.00 5.18
2867 3006 7.041780 GCAATCTCTTCTAAAAATATCCTCGCA 60.042 37.037 0.00 0.00 0.00 5.10
2868 3007 7.172361 AGCAATCTCTTCTAAAAATATCCTCGC 59.828 37.037 0.00 0.00 0.00 5.03
2869 3008 8.600449 AGCAATCTCTTCTAAAAATATCCTCG 57.400 34.615 0.00 0.00 0.00 4.63
2879 3018 9.342308 CCCAATTGTATAGCAATCTCTTCTAAA 57.658 33.333 4.43 0.00 46.29 1.85
2880 3019 8.494433 ACCCAATTGTATAGCAATCTCTTCTAA 58.506 33.333 4.43 0.00 46.29 2.10
2881 3020 7.933577 CACCCAATTGTATAGCAATCTCTTCTA 59.066 37.037 4.43 0.00 46.29 2.10
2882 3021 6.769822 CACCCAATTGTATAGCAATCTCTTCT 59.230 38.462 4.43 0.00 46.29 2.85
2883 3022 6.514048 GCACCCAATTGTATAGCAATCTCTTC 60.514 42.308 4.43 0.00 46.29 2.87
2884 3023 5.300286 GCACCCAATTGTATAGCAATCTCTT 59.700 40.000 4.43 0.00 46.29 2.85
2885 3024 4.823989 GCACCCAATTGTATAGCAATCTCT 59.176 41.667 4.43 0.00 46.29 3.10
2886 3025 4.580167 TGCACCCAATTGTATAGCAATCTC 59.420 41.667 4.43 0.00 46.29 2.75
2887 3026 4.535781 TGCACCCAATTGTATAGCAATCT 58.464 39.130 4.43 0.00 46.29 2.40
2888 3027 4.916983 TGCACCCAATTGTATAGCAATC 57.083 40.909 4.43 0.00 46.29 2.67
2889 3028 9.501441 GTGTCATGCACCCAATTGTATAGCAAT 62.501 40.741 13.55 0.00 44.25 3.56
2890 3029 4.097741 GTCATGCACCCAATTGTATAGCAA 59.902 41.667 13.55 0.08 41.89 3.91
2891 3030 3.631686 GTCATGCACCCAATTGTATAGCA 59.368 43.478 12.41 12.41 34.78 3.49
2892 3031 3.631686 TGTCATGCACCCAATTGTATAGC 59.368 43.478 4.43 3.80 0.00 2.97
2893 3032 5.173774 GTGTCATGCACCCAATTGTATAG 57.826 43.478 4.43 0.00 42.10 1.31
2906 3045 2.765699 TCAGCCTATACTGTGTCATGCA 59.234 45.455 0.00 0.00 38.84 3.96
2907 3046 3.126831 GTCAGCCTATACTGTGTCATGC 58.873 50.000 0.00 0.00 38.84 4.06
2908 3047 4.115516 GTGTCAGCCTATACTGTGTCATG 58.884 47.826 0.00 0.00 38.84 3.07
2909 3048 3.769300 TGTGTCAGCCTATACTGTGTCAT 59.231 43.478 0.00 0.00 38.84 3.06
2910 3049 3.161866 TGTGTCAGCCTATACTGTGTCA 58.838 45.455 0.00 0.00 38.84 3.58
2911 3050 3.868757 TGTGTCAGCCTATACTGTGTC 57.131 47.619 0.00 0.00 38.84 3.67
2912 3051 4.826274 AATGTGTCAGCCTATACTGTGT 57.174 40.909 0.00 0.00 38.84 3.72
2913 3052 4.740205 CGTAATGTGTCAGCCTATACTGTG 59.260 45.833 0.00 0.00 38.84 3.66
2914 3053 4.643334 TCGTAATGTGTCAGCCTATACTGT 59.357 41.667 0.00 0.00 38.84 3.55
2915 3054 5.183014 TCGTAATGTGTCAGCCTATACTG 57.817 43.478 0.00 0.00 39.12 2.74
2916 3055 5.847111 TTCGTAATGTGTCAGCCTATACT 57.153 39.130 0.00 0.00 0.00 2.12
2917 3056 6.897259 TTTTCGTAATGTGTCAGCCTATAC 57.103 37.500 0.00 0.00 0.00 1.47
2918 3057 7.466725 GCAATTTTCGTAATGTGTCAGCCTATA 60.467 37.037 0.00 0.00 0.00 1.31
2919 3058 6.677920 GCAATTTTCGTAATGTGTCAGCCTAT 60.678 38.462 0.00 0.00 0.00 2.57
2920 3059 5.391523 GCAATTTTCGTAATGTGTCAGCCTA 60.392 40.000 0.00 0.00 0.00 3.93
2921 3060 4.615912 GCAATTTTCGTAATGTGTCAGCCT 60.616 41.667 0.00 0.00 0.00 4.58
2922 3061 3.608073 GCAATTTTCGTAATGTGTCAGCC 59.392 43.478 0.00 0.00 0.00 4.85
2923 3062 4.475944 AGCAATTTTCGTAATGTGTCAGC 58.524 39.130 0.00 0.00 0.00 4.26
2924 3063 6.991485 AAAGCAATTTTCGTAATGTGTCAG 57.009 33.333 0.00 0.00 0.00 3.51
2925 3064 6.199908 CCAAAAGCAATTTTCGTAATGTGTCA 59.800 34.615 0.00 0.00 0.00 3.58
2926 3065 6.419413 TCCAAAAGCAATTTTCGTAATGTGTC 59.581 34.615 0.00 0.00 0.00 3.67
2927 3066 6.276847 TCCAAAAGCAATTTTCGTAATGTGT 58.723 32.000 0.00 0.00 0.00 3.72
2928 3067 6.128849 CCTCCAAAAGCAATTTTCGTAATGTG 60.129 38.462 0.00 0.00 0.00 3.21
2929 3068 5.925969 CCTCCAAAAGCAATTTTCGTAATGT 59.074 36.000 0.00 0.00 0.00 2.71
2930 3069 5.163963 GCCTCCAAAAGCAATTTTCGTAATG 60.164 40.000 0.00 0.00 0.00 1.90
2931 3070 4.929211 GCCTCCAAAAGCAATTTTCGTAAT 59.071 37.500 0.00 0.00 0.00 1.89
2932 3071 4.038642 AGCCTCCAAAAGCAATTTTCGTAA 59.961 37.500 0.00 0.00 0.00 3.18
2933 3072 3.572255 AGCCTCCAAAAGCAATTTTCGTA 59.428 39.130 0.00 0.00 0.00 3.43
2934 3073 2.365293 AGCCTCCAAAAGCAATTTTCGT 59.635 40.909 0.00 0.00 0.00 3.85
2935 3074 2.733026 CAGCCTCCAAAAGCAATTTTCG 59.267 45.455 0.00 0.00 0.00 3.46
2936 3075 3.992427 CTCAGCCTCCAAAAGCAATTTTC 59.008 43.478 0.00 0.00 0.00 2.29
2937 3076 3.804759 GCTCAGCCTCCAAAAGCAATTTT 60.805 43.478 0.00 0.00 33.21 1.82
2938 3077 2.289257 GCTCAGCCTCCAAAAGCAATTT 60.289 45.455 0.00 0.00 33.21 1.82
2939 3078 1.274447 GCTCAGCCTCCAAAAGCAATT 59.726 47.619 0.00 0.00 33.21 2.32
2940 3079 0.893447 GCTCAGCCTCCAAAAGCAAT 59.107 50.000 0.00 0.00 33.21 3.56
2941 3080 0.178981 AGCTCAGCCTCCAAAAGCAA 60.179 50.000 0.00 0.00 35.42 3.91
2942 3081 0.607489 GAGCTCAGCCTCCAAAAGCA 60.607 55.000 9.40 0.00 35.42 3.91
2943 3082 2.178856 GAGCTCAGCCTCCAAAAGC 58.821 57.895 9.40 0.00 0.00 3.51
2950 3089 0.968405 CCTCTATGGAGCTCAGCCTC 59.032 60.000 17.19 0.00 38.21 4.70
2951 3090 1.120795 GCCTCTATGGAGCTCAGCCT 61.121 60.000 17.19 0.00 38.21 4.58
2952 3091 1.370810 GCCTCTATGGAGCTCAGCC 59.629 63.158 17.19 0.00 38.21 4.85
2953 3092 1.120795 AGGCCTCTATGGAGCTCAGC 61.121 60.000 17.19 5.95 38.21 4.26
2954 3093 0.968405 GAGGCCTCTATGGAGCTCAG 59.032 60.000 26.25 4.49 38.21 3.35
2955 3094 0.560193 AGAGGCCTCTATGGAGCTCA 59.440 55.000 34.40 1.87 38.35 4.26
2956 3095 1.715785 AAGAGGCCTCTATGGAGCTC 58.284 55.000 35.31 4.71 39.39 4.09
2957 3096 2.188818 AAAGAGGCCTCTATGGAGCT 57.811 50.000 35.31 15.54 39.39 4.09
2958 3097 2.948315 CAAAAAGAGGCCTCTATGGAGC 59.052 50.000 35.31 5.60 39.39 4.70
2959 3098 2.948315 GCAAAAAGAGGCCTCTATGGAG 59.052 50.000 35.31 23.09 39.39 3.86
2960 3099 2.308570 TGCAAAAAGAGGCCTCTATGGA 59.691 45.455 35.31 28.71 39.39 3.41
2961 3100 2.726821 TGCAAAAAGAGGCCTCTATGG 58.273 47.619 35.31 24.17 39.39 2.74
2962 3101 4.789012 TTTGCAAAAAGAGGCCTCTATG 57.211 40.909 35.31 30.27 39.39 2.23
2963 3102 6.014327 TGAATTTTGCAAAAAGAGGCCTCTAT 60.014 34.615 35.31 23.77 39.39 1.98
2964 3103 5.304101 TGAATTTTGCAAAAAGAGGCCTCTA 59.696 36.000 35.31 16.34 39.39 2.43
2965 3104 4.101430 TGAATTTTGCAAAAAGAGGCCTCT 59.899 37.500 30.40 30.40 42.75 3.69
2966 3105 4.379652 TGAATTTTGCAAAAAGAGGCCTC 58.620 39.130 27.10 26.22 0.00 4.70
2967 3106 4.420522 TGAATTTTGCAAAAAGAGGCCT 57.579 36.364 27.10 3.86 0.00 5.19
2968 3107 5.066375 AGTTTGAATTTTGCAAAAAGAGGCC 59.934 36.000 27.10 14.32 37.03 5.19
2969 3108 6.122850 AGTTTGAATTTTGCAAAAAGAGGC 57.877 33.333 27.10 15.57 37.03 4.70
2970 3109 7.750769 TGAAGTTTGAATTTTGCAAAAAGAGG 58.249 30.769 27.10 0.00 37.03 3.69
2971 3110 9.777575 AATGAAGTTTGAATTTTGCAAAAAGAG 57.222 25.926 27.10 0.00 37.03 2.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.