Multiple sequence alignment - TraesCS5B01G352100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G352100 chr5B 100.000 5186 0 0 1 5186 531869581 531874766 0.000000e+00 9577.0
1 TraesCS5B01G352100 chr5B 92.611 2355 118 25 851 3184 531905783 531908102 0.000000e+00 3334.0
2 TraesCS5B01G352100 chr5B 90.926 1642 133 8 3181 4807 531908401 531910041 0.000000e+00 2193.0
3 TraesCS5B01G352100 chr5B 80.795 1031 164 21 999 2020 532087289 532088294 0.000000e+00 776.0
4 TraesCS5B01G352100 chr5B 75.989 1491 313 34 3184 4656 532461570 532463033 0.000000e+00 728.0
5 TraesCS5B01G352100 chr5B 80.073 823 146 14 942 1756 531939122 531939934 3.690000e-166 595.0
6 TraesCS5B01G352100 chr5B 88.710 496 43 8 3 491 531904854 531905343 1.330000e-165 593.0
7 TraesCS5B01G352100 chr5B 91.005 378 29 2 4807 5183 532258017 532258390 6.390000e-139 505.0
8 TraesCS5B01G352100 chr5B 88.123 261 21 1 2809 3059 250927134 250927394 9.000000e-78 302.0
9 TraesCS5B01G352100 chr5B 85.075 268 34 5 1760 2027 532458878 532459139 9.120000e-68 268.0
10 TraesCS5B01G352100 chr5B 79.885 348 35 16 166 491 532317245 532317579 7.210000e-54 222.0
11 TraesCS5B01G352100 chr5B 100.000 115 0 0 5412 5526 531874992 531875106 4.340000e-51 213.0
12 TraesCS5B01G352100 chr5B 94.444 54 3 0 5412 5465 532258457 532258510 3.550000e-12 84.2
13 TraesCS5B01G352100 chr5B 97.297 37 1 0 293 329 41902603 41902639 4.620000e-06 63.9
14 TraesCS5B01G352100 chr5A 94.391 1658 82 8 3093 4743 552882310 552883963 0.000000e+00 2536.0
15 TraesCS5B01G352100 chr5A 92.864 1121 72 3 985 2105 552868845 552869957 0.000000e+00 1620.0
16 TraesCS5B01G352100 chr5A 93.536 263 16 1 2524 2785 552881155 552881417 1.870000e-104 390.0
17 TraesCS5B01G352100 chr5A 88.679 265 23 4 591 849 552866717 552866980 3.210000e-82 316.0
18 TraesCS5B01G352100 chr5A 87.295 244 22 8 146 383 552860686 552860926 2.540000e-68 270.0
19 TraesCS5B01G352100 chr5A 81.707 328 46 9 2153 2471 36816875 36816553 1.530000e-65 261.0
20 TraesCS5B01G352100 chr5A 100.000 31 0 0 299 329 33925655 33925685 2.150000e-04 58.4
21 TraesCS5B01G352100 chr5D 88.358 1632 179 7 3184 4807 437980269 437981897 0.000000e+00 1951.0
22 TraesCS5B01G352100 chr5D 90.735 1252 104 6 851 2096 437977895 437979140 0.000000e+00 1659.0
23 TraesCS5B01G352100 chr5D 80.876 1119 182 25 920 2027 437987532 437988629 0.000000e+00 852.0
24 TraesCS5B01G352100 chr5D 76.376 1490 308 34 3184 4655 437991700 437993163 0.000000e+00 761.0
25 TraesCS5B01G352100 chr5D 88.995 418 30 6 66 483 437976950 437977351 2.300000e-138 503.0
26 TraesCS5B01G352100 chr5D 88.506 261 26 2 591 849 437977605 437977863 4.160000e-81 313.0
27 TraesCS5B01G352100 chr5D 87.266 267 21 3 2807 3062 238188988 238188724 5.410000e-75 292.0
28 TraesCS5B01G352100 chr5D 97.778 45 1 0 549 593 437977538 437977582 1.650000e-10 78.7
29 TraesCS5B01G352100 chr5D 86.957 69 7 2 4858 4925 421990791 421990858 5.940000e-10 76.8
30 TraesCS5B01G352100 chr5D 100.000 35 0 0 296 330 43959397 43959431 1.280000e-06 65.8
31 TraesCS5B01G352100 chr3B 77.691 1403 282 25 3186 4568 43099544 43100935 0.000000e+00 828.0
32 TraesCS5B01G352100 chr3B 79.125 1188 216 24 855 2027 43097053 43098223 0.000000e+00 791.0
33 TraesCS5B01G352100 chr3B 87.547 265 22 1 2810 3063 480377202 480376938 4.190000e-76 296.0
34 TraesCS5B01G352100 chr3B 92.000 50 3 1 4876 4924 568418047 568417998 9.930000e-08 69.4
35 TraesCS5B01G352100 chr6B 78.581 775 136 13 982 1756 567768319 567769063 8.320000e-133 484.0
36 TraesCS5B01G352100 chr6B 79.596 544 96 11 3184 3723 567777022 567777554 5.230000e-100 375.0
37 TraesCS5B01G352100 chr6B 84.866 337 37 8 2146 2471 20832897 20832564 1.480000e-85 327.0
38 TraesCS5B01G352100 chr6B 88.846 260 19 6 2807 3059 147680296 147680040 1.490000e-80 311.0
39 TraesCS5B01G352100 chr6B 91.163 215 19 0 2845 3059 640868526 640868740 5.410000e-75 292.0
40 TraesCS5B01G352100 chr6B 81.818 209 38 0 1768 1976 567769117 567769325 5.690000e-40 176.0
41 TraesCS5B01G352100 chr6B 81.319 91 10 6 289 372 669883610 669883700 3.570000e-07 67.6
42 TraesCS5B01G352100 chr2D 92.285 337 14 3 2144 2468 548044069 548044405 8.380000e-128 468.0
43 TraesCS5B01G352100 chr2D 89.752 322 29 1 2147 2468 546215713 546216030 5.150000e-110 409.0
44 TraesCS5B01G352100 chr2D 88.415 328 34 4 2145 2468 644401228 644401555 5.190000e-105 392.0
45 TraesCS5B01G352100 chr2D 97.436 39 0 1 2807 2845 388169894 388169931 1.280000e-06 65.8
46 TraesCS5B01G352100 chr2D 83.824 68 8 3 4860 4926 35588371 35588306 1.660000e-05 62.1
47 TraesCS5B01G352100 chr3A 91.892 333 21 4 2145 2471 658852414 658852082 1.400000e-125 460.0
48 TraesCS5B01G352100 chr3A 92.000 50 3 1 4871 4919 54359173 54359124 9.930000e-08 69.4
49 TraesCS5B01G352100 chr2A 91.892 333 19 1 2144 2468 24906775 24907107 5.040000e-125 459.0
50 TraesCS5B01G352100 chr7D 91.150 339 18 6 2142 2468 621791190 621791528 3.040000e-122 449.0
51 TraesCS5B01G352100 chr1A 90.476 336 29 3 2146 2478 12422392 12422727 1.830000e-119 440.0
52 TraesCS5B01G352100 chr1D 89.143 350 30 6 2130 2471 10187313 10186964 3.960000e-116 429.0
53 TraesCS5B01G352100 chr1D 97.297 37 1 0 2809 2845 255056867 255056831 4.620000e-06 63.9
54 TraesCS5B01G352100 chr6D 93.023 215 15 0 2845 3059 73498246 73498032 1.160000e-81 315.0
55 TraesCS5B01G352100 chr6D 92.558 215 16 0 2845 3059 273093521 273093307 5.380000e-80 309.0
56 TraesCS5B01G352100 chr6D 73.701 308 63 16 3439 3737 468089012 468088714 2.720000e-18 104.0
57 TraesCS5B01G352100 chr6D 100.000 37 0 0 2809 2845 108238335 108238371 9.930000e-08 69.4
58 TraesCS5B01G352100 chr6A 87.739 261 24 4 2807 3059 89894834 89894574 1.160000e-76 298.0
59 TraesCS5B01G352100 chr4D 87.786 262 21 1 2809 3059 275616756 275616495 4.190000e-76 296.0
60 TraesCS5B01G352100 chr4D 85.283 265 28 1 2806 3059 351739538 351739802 4.250000e-66 263.0
61 TraesCS5B01G352100 chr7B 85.167 209 20 1 2809 3006 80678836 80678628 2.610000e-48 204.0
62 TraesCS5B01G352100 chr2B 86.400 125 13 4 2146 2268 66355184 66355062 3.470000e-27 134.0
63 TraesCS5B01G352100 chr2B 83.333 72 7 5 4865 4933 117994998 117995067 1.660000e-05 62.1
64 TraesCS5B01G352100 chr7A 89.286 56 5 1 4865 4919 194456997 194457052 9.930000e-08 69.4
65 TraesCS5B01G352100 chr1B 89.091 55 4 2 4876 4929 664052269 664052216 3.570000e-07 67.6
66 TraesCS5B01G352100 chr1B 86.441 59 6 2 4876 4933 664043831 664043774 4.620000e-06 63.9
67 TraesCS5B01G352100 chr1B 87.500 48 4 1 284 331 666933366 666933321 3.000000e-03 54.7
68 TraesCS5B01G352100 chr4B 78.788 99 14 6 225 322 3892598 3892690 5.980000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G352100 chr5B 531869581 531875106 5525 False 4895.00 9577 100.0000 1 5526 2 chr5B.!!$F6 5525
1 TraesCS5B01G352100 chr5B 531904854 531910041 5187 False 2040.00 3334 90.7490 3 4807 3 chr5B.!!$F7 4804
2 TraesCS5B01G352100 chr5B 532087289 532088294 1005 False 776.00 776 80.7950 999 2020 1 chr5B.!!$F4 1021
3 TraesCS5B01G352100 chr5B 531939122 531939934 812 False 595.00 595 80.0730 942 1756 1 chr5B.!!$F3 814
4 TraesCS5B01G352100 chr5B 532458878 532463033 4155 False 498.00 728 80.5320 1760 4656 2 chr5B.!!$F9 2896
5 TraesCS5B01G352100 chr5A 552881155 552883963 2808 False 1463.00 2536 93.9635 2524 4743 2 chr5A.!!$F4 2219
6 TraesCS5B01G352100 chr5A 552866717 552869957 3240 False 968.00 1620 90.7715 591 2105 2 chr5A.!!$F3 1514
7 TraesCS5B01G352100 chr5D 437976950 437981897 4947 False 900.94 1951 90.8744 66 4807 5 chr5D.!!$F3 4741
8 TraesCS5B01G352100 chr5D 437987532 437993163 5631 False 806.50 852 78.6260 920 4655 2 chr5D.!!$F4 3735
9 TraesCS5B01G352100 chr3B 43097053 43100935 3882 False 809.50 828 78.4080 855 4568 2 chr3B.!!$F1 3713
10 TraesCS5B01G352100 chr6B 567777022 567777554 532 False 375.00 375 79.5960 3184 3723 1 chr6B.!!$F1 539
11 TraesCS5B01G352100 chr6B 567768319 567769325 1006 False 330.00 484 80.1995 982 1976 2 chr6B.!!$F4 994

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
706 925 0.324368 AGACTATGCACCGTCCCTCA 60.324 55.0 12.22 0.00 0.00 3.86 F
843 1065 0.625849 ATGTGCCCCGGAAGAATCTT 59.374 50.0 0.73 0.00 0.00 2.40 F
1696 3679 0.464452 GGACGGTCGAATTCTGGGAT 59.536 55.0 3.52 0.00 0.00 3.85 F
2767 5997 0.038599 TGTGGAGATGCATGCAACCT 59.961 50.0 26.68 23.48 0.00 3.50 F
4130 9439 0.764890 AGCAACTGTGGCCTTCAGTA 59.235 50.0 25.85 0.00 44.03 2.74 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1592 3575 0.036952 CTTCGTGTCAGCACCCTCAT 60.037 55.0 0.00 0.00 42.39 2.90 R
2376 4948 0.467290 GTTGTGTTGCTCCAGGGGAA 60.467 55.0 0.00 0.00 0.00 3.97 R
3280 8578 0.307760 CAAAGTGAAGCGGCGTTCTT 59.692 50.0 9.37 3.76 0.00 2.52 R
4135 9444 0.040204 AACCTCCAGGGATGGCAAAG 59.960 55.0 0.00 0.00 40.27 2.77 R
5446 10778 0.107831 AACCACTGCGCTACTGGAAA 59.892 50.0 20.89 0.00 0.00 3.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 1.212688 TGGAACGCATCAATCCCATCT 59.787 47.619 0.00 0.00 32.01 2.90
30 31 3.118075 TGGAACGCATCAATCCCATCTAA 60.118 43.478 0.00 0.00 32.01 2.10
46 47 4.220821 CCATCTAATCTAGCCATGGTACGT 59.779 45.833 14.67 0.00 29.86 3.57
53 54 3.819337 TCTAGCCATGGTACGTCTATGAC 59.181 47.826 14.67 2.56 37.22 3.06
55 56 3.828921 AGCCATGGTACGTCTATGACTA 58.171 45.455 14.67 0.00 37.22 2.59
63 64 9.602568 CATGGTACGTCTATGACTAGAGTATAT 57.397 37.037 0.00 0.00 37.22 0.86
125 126 4.825422 TGATTTTGTTGAAGCACAAACCA 58.175 34.783 0.00 0.24 44.51 3.67
133 134 5.301551 TGTTGAAGCACAAACCATAGAACAT 59.698 36.000 0.00 0.00 40.36 2.71
134 135 5.627499 TGAAGCACAAACCATAGAACATC 57.373 39.130 0.00 0.00 0.00 3.06
215 219 4.923281 CACAGCAAAGTTTTATTAGGCACC 59.077 41.667 0.00 0.00 0.00 5.01
233 237 1.518572 CGGAAGCGGCTATTGTCGT 60.519 57.895 1.35 0.00 44.07 4.34
275 279 1.787012 CATTGTGCAAAGAGTTGGCC 58.213 50.000 0.00 0.00 35.10 5.36
286 293 7.661847 GTGCAAAGAGTTGGCCTATAGTATTAT 59.338 37.037 3.32 0.00 35.10 1.28
287 294 7.661437 TGCAAAGAGTTGGCCTATAGTATTATG 59.339 37.037 3.32 0.00 35.10 1.90
327 334 1.892474 GGCCATCCACTTGCAAGTTTA 59.108 47.619 29.23 19.70 37.08 2.01
339 346 1.382088 GCAAGTTTACGTTTGATGCGC 59.618 47.619 0.00 0.00 0.00 6.09
341 348 3.233578 CAAGTTTACGTTTGATGCGCAT 58.766 40.909 25.66 25.66 0.00 4.73
380 387 5.189736 GGTAGGTGGATGGATGCATTCTATA 59.810 44.000 6.53 0.00 0.00 1.31
381 388 6.126652 GGTAGGTGGATGGATGCATTCTATAT 60.127 42.308 6.53 0.00 0.00 0.86
382 389 7.071196 GGTAGGTGGATGGATGCATTCTATATA 59.929 40.741 6.53 0.00 0.00 0.86
413 420 3.192001 AGTCACAATCATTTGCGCATTCT 59.808 39.130 12.75 0.00 36.22 2.40
418 425 4.106909 CAATCATTTGCGCATTCTTAGCA 58.893 39.130 12.75 0.00 39.33 3.49
433 440 3.834799 GCAGCTGGCTGGCATTCC 61.835 66.667 21.76 2.82 43.77 3.01
495 511 2.223971 CCACAACTACAAGTGAGGTCGT 60.224 50.000 0.00 0.00 37.97 4.34
496 512 3.454375 CACAACTACAAGTGAGGTCGTT 58.546 45.455 0.00 0.00 37.97 3.85
497 513 3.245284 CACAACTACAAGTGAGGTCGTTG 59.755 47.826 7.96 7.96 43.51 4.10
498 514 2.150397 ACTACAAGTGAGGTCGTTGC 57.850 50.000 0.00 0.00 0.00 4.17
500 516 2.159014 ACTACAAGTGAGGTCGTTGCAA 60.159 45.455 0.00 0.00 0.00 4.08
542 586 1.699634 GGTCCTGCCTTATCCTGCATA 59.300 52.381 0.00 0.00 36.79 3.14
596 809 7.970614 CCTGTCAAATAAGCCAATAGAAAGAAC 59.029 37.037 0.00 0.00 0.00 3.01
625 842 9.807921 AGGAGGTAAAAATGATAAGTCAAAGAA 57.192 29.630 0.00 0.00 38.01 2.52
635 852 6.533730 TGATAAGTCAAAGAAGAAGGCTCAA 58.466 36.000 0.00 0.00 0.00 3.02
639 856 5.568392 AGTCAAAGAAGAAGGCTCAATGAT 58.432 37.500 0.00 0.00 0.00 2.45
644 861 8.859090 TCAAAGAAGAAGGCTCAATGATAAAAA 58.141 29.630 0.00 0.00 0.00 1.94
656 873 9.415544 GCTCAATGATAAAAAGCCCAATATTAG 57.584 33.333 0.00 0.00 0.00 1.73
699 918 1.686587 TCCACCATAGACTATGCACCG 59.313 52.381 15.87 6.03 34.85 4.94
706 925 0.324368 AGACTATGCACCGTCCCTCA 60.324 55.000 12.22 0.00 0.00 3.86
739 958 8.396272 AGAAAAATACAAGAGCAGCTTTAGAA 57.604 30.769 0.00 0.00 33.60 2.10
782 1004 4.614535 GCACATCTCAAGGACATTGTGAAC 60.615 45.833 8.47 0.00 42.82 3.18
808 1030 9.613428 CATTGATTAATACAGGAGTAGGTTTGA 57.387 33.333 0.00 0.00 32.86 2.69
836 1058 4.738998 CAGCCATGTGCCCCGGAA 62.739 66.667 0.73 0.00 42.71 4.30
843 1065 0.625849 ATGTGCCCCGGAAGAATCTT 59.374 50.000 0.73 0.00 0.00 2.40
849 1071 1.679032 CCCCGGAAGAATCTTCACCAC 60.679 57.143 22.71 6.18 0.00 4.16
860 1113 2.257207 TCTTCACCACGAGGGAAAGAT 58.743 47.619 12.11 0.00 41.15 2.40
880 1135 8.579850 AAAGATCAACCAATTATAAGAGCACA 57.420 30.769 0.00 0.00 0.00 4.57
882 1137 8.218338 AGATCAACCAATTATAAGAGCACAAG 57.782 34.615 0.00 0.00 0.00 3.16
900 1155 5.348164 CACAAGTTGGTTAAACAGAAAGGG 58.652 41.667 7.96 0.00 41.61 3.95
913 1168 3.716872 ACAGAAAGGGGAGAAGACTTTGA 59.283 43.478 0.00 0.00 34.82 2.69
955 1210 2.181584 ACGCGAGTTAGGAGGACAG 58.818 57.895 15.93 0.00 46.40 3.51
1060 3037 2.665165 TCAACAAGTTGAAGCATGGGT 58.335 42.857 12.85 0.00 45.56 4.51
1125 3102 3.513662 GAGTAAGAAGCCTTCCGAAGAC 58.486 50.000 9.87 0.00 33.94 3.01
1308 3291 1.271379 GCCCAAGGAAGAACTGCAGTA 60.271 52.381 22.01 0.00 0.00 2.74
1341 3324 1.002251 GATGTAGAAGAGGGCGTCGAG 60.002 57.143 0.00 0.00 0.00 4.04
1485 3468 1.416401 GGCATCATCTACGGAAGGGAA 59.584 52.381 0.00 0.00 0.00 3.97
1494 3477 2.919096 CGGAAGGGAAAGGGGGCTT 61.919 63.158 0.00 0.00 0.00 4.35
1546 3529 1.940883 CTTGCATTGTGCTGCCCGAT 61.941 55.000 0.00 0.00 45.31 4.18
1582 3565 9.309516 CCAAAATGGTTTCTTATCTCATTGATG 57.690 33.333 0.00 0.00 33.02 3.07
1592 3575 3.615224 TCTCATTGATGTAGCTGCACA 57.385 42.857 6.66 4.81 0.00 4.57
1695 3678 0.613853 AGGACGGTCGAATTCTGGGA 60.614 55.000 3.52 0.00 0.00 4.37
1696 3679 0.464452 GGACGGTCGAATTCTGGGAT 59.536 55.000 3.52 0.00 0.00 3.85
1704 3687 2.843730 TCGAATTCTGGGATGGAAGGAA 59.156 45.455 3.52 0.00 0.00 3.36
1736 3722 1.673033 GCTTGATGCTACTCACACCGT 60.673 52.381 0.00 0.00 38.95 4.83
1887 3918 2.327325 TCTTGCTGGGGAAGAGTACT 57.673 50.000 0.00 0.00 0.00 2.73
2002 4033 5.650266 CACAGAGACTCAGGTACTCACTAAT 59.350 44.000 5.02 0.00 34.60 1.73
2003 4034 6.824196 CACAGAGACTCAGGTACTCACTAATA 59.176 42.308 5.02 0.00 34.60 0.98
2004 4035 7.337184 CACAGAGACTCAGGTACTCACTAATAA 59.663 40.741 5.02 0.00 34.60 1.40
2006 4037 8.908903 CAGAGACTCAGGTACTCACTAATAAAT 58.091 37.037 5.02 0.00 34.60 1.40
2007 4038 8.908903 AGAGACTCAGGTACTCACTAATAAATG 58.091 37.037 5.02 0.00 34.60 2.32
2009 4040 7.124298 AGACTCAGGTACTCACTAATAAATGCA 59.876 37.037 0.00 0.00 34.60 3.96
2010 4041 7.796054 ACTCAGGTACTCACTAATAAATGCAT 58.204 34.615 0.00 0.00 34.60 3.96
2065 4098 5.778241 TCATTCTAAATCATAGCGTCCCCTA 59.222 40.000 0.00 0.00 0.00 3.53
2202 4762 2.493035 ACAACGATCATCAACACAGCA 58.507 42.857 0.00 0.00 0.00 4.41
2224 4796 3.883180 AAACGCACGCACACACCC 61.883 61.111 0.00 0.00 0.00 4.61
2237 4809 1.354031 ACACACCCAAGGCATGATACA 59.646 47.619 0.00 0.00 0.00 2.29
2243 4815 2.079158 CCAAGGCATGATACATAGGCG 58.921 52.381 0.00 0.00 0.00 5.52
2395 4967 0.467290 TTCCCCTGGAGCAACACAAC 60.467 55.000 0.00 0.00 31.21 3.32
2426 4998 2.372690 CCGCGACGACACCTTCAAG 61.373 63.158 8.23 0.00 0.00 3.02
2429 5001 0.784778 GCGACGACACCTTCAAGAAG 59.215 55.000 0.00 2.83 38.14 2.85
2468 5040 4.641792 GGTCCATCCGGGGATAGT 57.358 61.111 0.00 0.00 39.62 2.12
2540 5178 6.073548 GGTTGTTATATGCTCGATCAAAGGAG 60.074 42.308 0.00 0.00 0.00 3.69
2712 5942 0.829990 TTACCGCATGAGGATCTGCA 59.170 50.000 23.45 0.00 38.56 4.41
2767 5997 0.038599 TGTGGAGATGCATGCAACCT 59.961 50.000 26.68 23.48 0.00 3.50
2822 6058 9.120538 TGTTTTTAGCATATACTCCCTTCATTC 57.879 33.333 0.00 0.00 0.00 2.67
3280 8578 1.774254 ACACAGGTGGACAAAGATGGA 59.226 47.619 4.24 0.00 34.19 3.41
3393 8691 3.275617 TGTATGGATTTCCCGGACTTG 57.724 47.619 0.73 0.00 37.93 3.16
3730 9028 6.820656 ACTTTAGGATGTTCTGTGCTCTATTG 59.179 38.462 0.00 0.00 0.00 1.90
3739 9037 2.441001 CTGTGCTCTATTGGGGAATCCT 59.559 50.000 0.00 0.00 36.20 3.24
3776 9074 8.293216 TGAATATAACAAATAACCAGGGGGAAT 58.707 33.333 0.00 0.00 38.05 3.01
4007 9314 1.135199 GTGTCGTTCGCTGGGATAAGA 60.135 52.381 0.00 0.00 0.00 2.10
4062 9369 1.210722 GGAGGAGGACCAAGAATCACC 59.789 57.143 0.00 0.00 38.94 4.02
4130 9439 0.764890 AGCAACTGTGGCCTTCAGTA 59.235 50.000 25.85 0.00 44.03 2.74
4135 9444 1.202770 ACTGTGGCCTTCAGTACAACC 60.203 52.381 24.92 0.00 43.17 3.77
4258 9570 4.993584 ACATTAGCTTTCATATGCTCCTCG 59.006 41.667 0.00 0.00 40.35 4.63
4261 9573 1.530293 GCTTTCATATGCTCCTCGCTG 59.470 52.381 0.00 0.00 40.11 5.18
4267 9579 0.755327 TATGCTCCTCGCTGGCTACA 60.755 55.000 0.00 0.00 40.11 2.74
4281 9593 2.289756 TGGCTACAATTGGCTTCACGTA 60.290 45.455 10.83 0.00 0.00 3.57
4338 9660 6.908284 CGTGAAGTCTACTTAGTCTTATCTGC 59.092 42.308 0.00 0.00 36.11 4.26
4375 9697 8.296713 TCGAGTTCATTCATATTCATGTCGATA 58.703 33.333 0.00 0.00 29.85 2.92
4468 9790 0.889306 CTCCTACCGTATGGCTAGGC 59.111 60.000 9.85 9.85 38.18 3.93
4484 9806 6.594744 TGGCTAGGCATATATATGGATGTTG 58.405 40.000 21.50 0.00 34.32 3.33
4523 9845 6.751514 TTCTTGCACGACCATTATGTATTT 57.248 33.333 0.00 0.00 0.00 1.40
4531 9853 5.067283 ACGACCATTATGTATTTGAAAGGGC 59.933 40.000 0.00 0.00 0.00 5.19
4533 9855 4.340950 ACCATTATGTATTTGAAAGGGCCG 59.659 41.667 0.00 0.00 0.00 6.13
4658 9980 1.287425 CCGTCACCGCTAAATCCTTC 58.713 55.000 0.00 0.00 0.00 3.46
4710 10041 1.507141 CTTGTCCGGAACTGGTGTGC 61.507 60.000 5.23 0.00 0.00 4.57
4838 10170 9.450807 GTATGAATTGTATAATGGAAGTGTTGC 57.549 33.333 0.00 0.00 0.00 4.17
4839 10171 7.459795 TGAATTGTATAATGGAAGTGTTGCA 57.540 32.000 0.00 0.00 34.77 4.08
4840 10172 7.890515 TGAATTGTATAATGGAAGTGTTGCAA 58.109 30.769 0.00 0.00 33.68 4.08
4841 10173 8.530311 TGAATTGTATAATGGAAGTGTTGCAAT 58.470 29.630 0.59 0.00 33.68 3.56
4842 10174 8.706492 AATTGTATAATGGAAGTGTTGCAATG 57.294 30.769 0.59 0.00 33.68 2.82
4843 10175 6.206395 TGTATAATGGAAGTGTTGCAATGG 57.794 37.500 0.59 0.00 33.68 3.16
4844 10176 5.714333 TGTATAATGGAAGTGTTGCAATGGT 59.286 36.000 0.59 0.00 33.68 3.55
4845 10177 5.743636 ATAATGGAAGTGTTGCAATGGTT 57.256 34.783 0.59 0.00 33.68 3.67
4846 10178 3.665745 ATGGAAGTGTTGCAATGGTTC 57.334 42.857 0.59 5.78 33.68 3.62
4847 10179 1.686052 TGGAAGTGTTGCAATGGTTCC 59.314 47.619 21.26 21.26 35.09 3.62
4848 10180 1.000843 GGAAGTGTTGCAATGGTTCCC 59.999 52.381 18.94 7.77 0.00 3.97
4849 10181 1.963515 GAAGTGTTGCAATGGTTCCCT 59.036 47.619 0.59 0.00 0.00 4.20
4850 10182 1.620822 AGTGTTGCAATGGTTCCCTC 58.379 50.000 0.59 0.00 0.00 4.30
4851 10183 1.133513 AGTGTTGCAATGGTTCCCTCA 60.134 47.619 0.59 0.00 0.00 3.86
4852 10184 1.270550 GTGTTGCAATGGTTCCCTCAG 59.729 52.381 0.59 0.00 0.00 3.35
4853 10185 1.133513 TGTTGCAATGGTTCCCTCAGT 60.134 47.619 0.59 0.00 0.00 3.41
4854 10186 1.963515 GTTGCAATGGTTCCCTCAGTT 59.036 47.619 0.59 0.00 0.00 3.16
4855 10187 2.365293 GTTGCAATGGTTCCCTCAGTTT 59.635 45.455 0.59 0.00 0.00 2.66
4856 10188 2.238521 TGCAATGGTTCCCTCAGTTTC 58.761 47.619 0.00 0.00 0.00 2.78
4857 10189 2.238521 GCAATGGTTCCCTCAGTTTCA 58.761 47.619 0.00 0.00 0.00 2.69
4858 10190 2.627699 GCAATGGTTCCCTCAGTTTCAA 59.372 45.455 0.00 0.00 0.00 2.69
4859 10191 3.069443 GCAATGGTTCCCTCAGTTTCAAA 59.931 43.478 0.00 0.00 0.00 2.69
4860 10192 4.442753 GCAATGGTTCCCTCAGTTTCAAAA 60.443 41.667 0.00 0.00 0.00 2.44
4861 10193 5.742838 GCAATGGTTCCCTCAGTTTCAAAAT 60.743 40.000 0.00 0.00 0.00 1.82
4862 10194 6.518200 GCAATGGTTCCCTCAGTTTCAAAATA 60.518 38.462 0.00 0.00 0.00 1.40
4863 10195 7.441017 CAATGGTTCCCTCAGTTTCAAAATAA 58.559 34.615 0.00 0.00 0.00 1.40
4864 10196 7.797121 ATGGTTCCCTCAGTTTCAAAATAAT 57.203 32.000 0.00 0.00 0.00 1.28
4865 10197 7.610580 TGGTTCCCTCAGTTTCAAAATAATT 57.389 32.000 0.00 0.00 0.00 1.40
4866 10198 7.441017 TGGTTCCCTCAGTTTCAAAATAATTG 58.559 34.615 0.00 0.00 0.00 2.32
4867 10199 7.070571 TGGTTCCCTCAGTTTCAAAATAATTGT 59.929 33.333 0.00 0.00 0.00 2.71
4868 10200 7.931407 GGTTCCCTCAGTTTCAAAATAATTGTT 59.069 33.333 0.00 0.00 0.00 2.83
4869 10201 9.325198 GTTCCCTCAGTTTCAAAATAATTGTTT 57.675 29.630 0.00 0.00 0.00 2.83
4870 10202 9.898152 TTCCCTCAGTTTCAAAATAATTGTTTT 57.102 25.926 7.06 7.06 0.00 2.43
4907 10239 7.981102 AAGTTGAGACACTTATTTTAGGACC 57.019 36.000 0.00 0.00 35.10 4.46
4908 10240 6.164176 AGTTGAGACACTTATTTTAGGACCG 58.836 40.000 0.00 0.00 0.00 4.79
4909 10241 5.988310 TGAGACACTTATTTTAGGACCGA 57.012 39.130 0.00 0.00 0.00 4.69
4910 10242 5.962433 TGAGACACTTATTTTAGGACCGAG 58.038 41.667 0.00 0.00 0.00 4.63
4911 10243 5.713389 TGAGACACTTATTTTAGGACCGAGA 59.287 40.000 0.00 0.00 0.00 4.04
4912 10244 6.209986 TGAGACACTTATTTTAGGACCGAGAA 59.790 38.462 0.00 0.00 0.00 2.87
4913 10245 6.631962 AGACACTTATTTTAGGACCGAGAAG 58.368 40.000 0.00 0.00 0.00 2.85
4914 10246 6.210984 AGACACTTATTTTAGGACCGAGAAGT 59.789 38.462 0.00 0.00 0.00 3.01
4915 10247 7.395489 AGACACTTATTTTAGGACCGAGAAGTA 59.605 37.037 0.00 0.00 0.00 2.24
4916 10248 8.075761 ACACTTATTTTAGGACCGAGAAGTAT 57.924 34.615 0.00 0.00 0.00 2.12
4917 10249 9.193806 ACACTTATTTTAGGACCGAGAAGTATA 57.806 33.333 0.00 0.00 0.00 1.47
4950 10282 5.880054 AATTGTTACAATGGTTCTCTCCG 57.120 39.130 11.60 0.00 0.00 4.63
4951 10283 4.345859 TTGTTACAATGGTTCTCTCCGT 57.654 40.909 0.00 0.00 0.00 4.69
4952 10284 3.921677 TGTTACAATGGTTCTCTCCGTC 58.078 45.455 0.00 0.00 0.00 4.79
4953 10285 3.259902 GTTACAATGGTTCTCTCCGTCC 58.740 50.000 0.00 0.00 0.00 4.79
4954 10286 0.613777 ACAATGGTTCTCTCCGTCCC 59.386 55.000 0.00 0.00 0.00 4.46
4955 10287 0.613260 CAATGGTTCTCTCCGTCCCA 59.387 55.000 0.00 0.00 0.00 4.37
4956 10288 1.003118 CAATGGTTCTCTCCGTCCCAA 59.997 52.381 0.00 0.00 0.00 4.12
4957 10289 1.358152 ATGGTTCTCTCCGTCCCAAA 58.642 50.000 0.00 0.00 0.00 3.28
4958 10290 1.133363 TGGTTCTCTCCGTCCCAAAA 58.867 50.000 0.00 0.00 0.00 2.44
4959 10291 1.702957 TGGTTCTCTCCGTCCCAAAAT 59.297 47.619 0.00 0.00 0.00 1.82
4960 10292 2.907696 TGGTTCTCTCCGTCCCAAAATA 59.092 45.455 0.00 0.00 0.00 1.40
4961 10293 3.328343 TGGTTCTCTCCGTCCCAAAATAA 59.672 43.478 0.00 0.00 0.00 1.40
4962 10294 3.939592 GGTTCTCTCCGTCCCAAAATAAG 59.060 47.826 0.00 0.00 0.00 1.73
4963 10295 4.323257 GGTTCTCTCCGTCCCAAAATAAGA 60.323 45.833 0.00 0.00 0.00 2.10
4964 10296 4.737855 TCTCTCCGTCCCAAAATAAGAG 57.262 45.455 0.00 0.00 0.00 2.85
4965 10297 3.451178 TCTCTCCGTCCCAAAATAAGAGG 59.549 47.826 0.00 0.00 31.78 3.69
4966 10298 3.446968 TCTCCGTCCCAAAATAAGAGGA 58.553 45.455 0.00 0.00 0.00 3.71
4967 10299 3.841845 TCTCCGTCCCAAAATAAGAGGAA 59.158 43.478 0.00 0.00 0.00 3.36
4968 10300 4.473559 TCTCCGTCCCAAAATAAGAGGAAT 59.526 41.667 0.00 0.00 0.00 3.01
4969 10301 5.045140 TCTCCGTCCCAAAATAAGAGGAATT 60.045 40.000 0.00 0.00 0.00 2.17
4970 10302 4.947388 TCCGTCCCAAAATAAGAGGAATTG 59.053 41.667 0.00 0.00 0.00 2.32
4971 10303 4.947388 CCGTCCCAAAATAAGAGGAATTGA 59.053 41.667 0.00 0.00 0.00 2.57
4972 10304 5.417580 CCGTCCCAAAATAAGAGGAATTGAA 59.582 40.000 0.00 0.00 0.00 2.69
4973 10305 6.096846 CCGTCCCAAAATAAGAGGAATTGAAT 59.903 38.462 0.00 0.00 0.00 2.57
4974 10306 7.363793 CCGTCCCAAAATAAGAGGAATTGAATT 60.364 37.037 0.00 0.00 0.00 2.17
4975 10307 8.682710 CGTCCCAAAATAAGAGGAATTGAATTA 58.317 33.333 0.00 0.00 0.00 1.40
4997 10329 9.908152 AATTAACAAACTTAGATAGTTGCAACC 57.092 29.630 25.62 10.95 46.34 3.77
4998 10330 8.685838 TTAACAAACTTAGATAGTTGCAACCT 57.314 30.769 25.62 17.52 46.34 3.50
4999 10331 7.582667 AACAAACTTAGATAGTTGCAACCTT 57.417 32.000 25.62 13.58 46.34 3.50
5000 10332 7.203255 ACAAACTTAGATAGTTGCAACCTTC 57.797 36.000 25.62 20.91 46.34 3.46
5001 10333 6.770785 ACAAACTTAGATAGTTGCAACCTTCA 59.229 34.615 25.62 9.41 46.34 3.02
5002 10334 6.803154 AACTTAGATAGTTGCAACCTTCAC 57.197 37.500 25.62 12.73 45.33 3.18
5003 10335 6.115448 ACTTAGATAGTTGCAACCTTCACT 57.885 37.500 25.62 18.38 31.29 3.41
5004 10336 7.241042 ACTTAGATAGTTGCAACCTTCACTA 57.759 36.000 25.62 17.49 31.29 2.74
5005 10337 7.852263 ACTTAGATAGTTGCAACCTTCACTAT 58.148 34.615 25.62 15.28 31.29 2.12
5006 10338 8.978472 ACTTAGATAGTTGCAACCTTCACTATA 58.022 33.333 25.62 9.48 31.29 1.31
5007 10339 9.469807 CTTAGATAGTTGCAACCTTCACTATAG 57.530 37.037 25.62 15.34 0.00 1.31
5008 10340 7.425224 AGATAGTTGCAACCTTCACTATAGT 57.575 36.000 25.62 0.00 0.00 2.12
5009 10341 7.493367 AGATAGTTGCAACCTTCACTATAGTC 58.507 38.462 25.62 5.62 0.00 2.59
5010 10342 4.495422 AGTTGCAACCTTCACTATAGTCG 58.505 43.478 25.62 0.00 0.00 4.18
5011 10343 3.520290 TGCAACCTTCACTATAGTCGG 57.480 47.619 1.26 6.63 0.00 4.79
5012 10344 2.167693 TGCAACCTTCACTATAGTCGGG 59.832 50.000 1.26 7.93 0.00 5.14
5013 10345 2.822764 CAACCTTCACTATAGTCGGGC 58.177 52.381 1.26 0.00 0.00 6.13
5014 10346 1.411041 ACCTTCACTATAGTCGGGCC 58.589 55.000 1.26 0.00 0.00 5.80
5015 10347 1.063114 ACCTTCACTATAGTCGGGCCT 60.063 52.381 0.84 0.00 0.00 5.19
5016 10348 2.040178 CCTTCACTATAGTCGGGCCTT 58.960 52.381 0.84 0.00 0.00 4.35
5017 10349 2.224066 CCTTCACTATAGTCGGGCCTTG 60.224 54.545 0.84 0.00 0.00 3.61
5018 10350 0.750850 TCACTATAGTCGGGCCTTGC 59.249 55.000 0.84 0.00 0.00 4.01
5019 10351 0.464036 CACTATAGTCGGGCCTTGCA 59.536 55.000 0.84 0.00 0.00 4.08
5020 10352 1.070758 CACTATAGTCGGGCCTTGCAT 59.929 52.381 0.84 0.00 0.00 3.96
5021 10353 1.070758 ACTATAGTCGGGCCTTGCATG 59.929 52.381 0.84 0.00 0.00 4.06
5022 10354 1.070758 CTATAGTCGGGCCTTGCATGT 59.929 52.381 0.84 0.00 0.00 3.21
5023 10355 1.128200 ATAGTCGGGCCTTGCATGTA 58.872 50.000 0.84 0.00 0.00 2.29
5024 10356 0.464036 TAGTCGGGCCTTGCATGTAG 59.536 55.000 0.84 0.00 0.00 2.74
5025 10357 1.078426 GTCGGGCCTTGCATGTAGT 60.078 57.895 0.84 0.00 0.00 2.73
5026 10358 0.676782 GTCGGGCCTTGCATGTAGTT 60.677 55.000 0.84 0.00 0.00 2.24
5027 10359 0.676466 TCGGGCCTTGCATGTAGTTG 60.676 55.000 0.84 0.00 0.00 3.16
5028 10360 1.512694 GGGCCTTGCATGTAGTTGC 59.487 57.895 0.84 0.00 43.07 4.17
5035 10367 3.984292 GCATGTAGTTGCACTGCTC 57.016 52.632 1.98 0.00 42.31 4.26
5036 10368 0.449388 GCATGTAGTTGCACTGCTCC 59.551 55.000 1.98 0.00 42.31 4.70
5037 10369 1.089920 CATGTAGTTGCACTGCTCCC 58.910 55.000 1.98 0.00 31.77 4.30
5038 10370 0.692476 ATGTAGTTGCACTGCTCCCA 59.308 50.000 1.98 0.00 31.77 4.37
5039 10371 0.472044 TGTAGTTGCACTGCTCCCAA 59.528 50.000 1.98 0.00 31.77 4.12
5040 10372 0.875059 GTAGTTGCACTGCTCCCAAC 59.125 55.000 1.98 0.00 39.20 3.77
5041 10373 0.472044 TAGTTGCACTGCTCCCAACA 59.528 50.000 1.98 0.00 40.85 3.33
5042 10374 1.103398 AGTTGCACTGCTCCCAACAC 61.103 55.000 1.98 0.00 40.85 3.32
5043 10375 2.186160 TTGCACTGCTCCCAACACG 61.186 57.895 1.98 0.00 0.00 4.49
5044 10376 3.357079 GCACTGCTCCCAACACGG 61.357 66.667 0.00 0.00 0.00 4.94
5045 10377 2.425592 CACTGCTCCCAACACGGA 59.574 61.111 0.00 0.00 36.56 4.69
5046 10378 1.003355 CACTGCTCCCAACACGGAT 60.003 57.895 0.00 0.00 36.56 4.18
5047 10379 1.003355 ACTGCTCCCAACACGGATG 60.003 57.895 0.00 0.00 36.56 3.51
5048 10380 1.296392 CTGCTCCCAACACGGATGA 59.704 57.895 0.00 0.00 36.56 2.92
5049 10381 0.321564 CTGCTCCCAACACGGATGAA 60.322 55.000 0.00 0.00 36.56 2.57
5050 10382 0.321564 TGCTCCCAACACGGATGAAG 60.322 55.000 0.00 0.00 36.56 3.02
5051 10383 1.648467 GCTCCCAACACGGATGAAGC 61.648 60.000 0.00 0.00 36.56 3.86
5052 10384 0.321564 CTCCCAACACGGATGAAGCA 60.322 55.000 0.00 0.00 36.56 3.91
5053 10385 0.109532 TCCCAACACGGATGAAGCAA 59.890 50.000 0.00 0.00 36.56 3.91
5054 10386 0.523072 CCCAACACGGATGAAGCAAG 59.477 55.000 0.00 0.00 36.56 4.01
5055 10387 0.523072 CCAACACGGATGAAGCAAGG 59.477 55.000 0.00 0.00 36.56 3.61
5056 10388 1.522668 CAACACGGATGAAGCAAGGA 58.477 50.000 0.00 0.00 0.00 3.36
5057 10389 1.197721 CAACACGGATGAAGCAAGGAC 59.802 52.381 0.00 0.00 0.00 3.85
5058 10390 0.687354 ACACGGATGAAGCAAGGACT 59.313 50.000 0.00 0.00 0.00 3.85
5059 10391 1.072331 ACACGGATGAAGCAAGGACTT 59.928 47.619 0.00 0.00 0.00 3.01
5060 10392 2.154462 CACGGATGAAGCAAGGACTTT 58.846 47.619 0.00 0.00 0.00 2.66
5061 10393 2.095567 CACGGATGAAGCAAGGACTTTG 60.096 50.000 0.00 0.00 39.88 2.77
5062 10394 1.470098 CGGATGAAGCAAGGACTTTGG 59.530 52.381 0.00 0.00 37.26 3.28
5064 10396 2.229784 GGATGAAGCAAGGACTTTGGTG 59.770 50.000 2.49 0.00 46.27 4.17
5065 10397 2.435372 TGAAGCAAGGACTTTGGTGT 57.565 45.000 2.49 0.00 46.27 4.16
5066 10398 2.297701 TGAAGCAAGGACTTTGGTGTC 58.702 47.619 2.49 4.31 46.27 3.67
5067 10399 2.092429 TGAAGCAAGGACTTTGGTGTCT 60.092 45.455 2.49 0.00 46.27 3.41
5068 10400 2.262423 AGCAAGGACTTTGGTGTCTC 57.738 50.000 0.69 0.00 45.31 3.36
5069 10401 1.202818 AGCAAGGACTTTGGTGTCTCC 60.203 52.381 0.69 0.00 45.31 3.71
5070 10402 1.202818 GCAAGGACTTTGGTGTCTCCT 60.203 52.381 0.00 0.00 37.26 3.69
5071 10403 2.749800 GCAAGGACTTTGGTGTCTCCTT 60.750 50.000 0.00 0.00 37.26 3.36
5072 10404 3.142174 CAAGGACTTTGGTGTCTCCTTC 58.858 50.000 0.00 0.00 37.16 3.46
5073 10405 1.700186 AGGACTTTGGTGTCTCCTTCC 59.300 52.381 0.00 0.00 37.16 3.46
5074 10406 1.700186 GGACTTTGGTGTCTCCTTCCT 59.300 52.381 0.00 0.00 37.16 3.36
5075 10407 2.289756 GGACTTTGGTGTCTCCTTCCTC 60.290 54.545 0.00 0.00 37.16 3.71
5076 10408 2.635427 GACTTTGGTGTCTCCTTCCTCT 59.365 50.000 0.00 0.00 37.07 3.69
5077 10409 2.370189 ACTTTGGTGTCTCCTTCCTCTG 59.630 50.000 0.00 0.00 37.07 3.35
5078 10410 1.352083 TTGGTGTCTCCTTCCTCTGG 58.648 55.000 0.00 0.00 37.07 3.86
5079 10411 1.194781 TGGTGTCTCCTTCCTCTGGC 61.195 60.000 0.00 0.00 37.07 4.85
5080 10412 0.907230 GGTGTCTCCTTCCTCTGGCT 60.907 60.000 0.00 0.00 0.00 4.75
5081 10413 1.619977 GGTGTCTCCTTCCTCTGGCTA 60.620 57.143 0.00 0.00 0.00 3.93
5082 10414 1.478916 GTGTCTCCTTCCTCTGGCTAC 59.521 57.143 0.00 0.00 0.00 3.58
5083 10415 1.077169 TGTCTCCTTCCTCTGGCTACA 59.923 52.381 0.00 0.00 0.00 2.74
5084 10416 2.180276 GTCTCCTTCCTCTGGCTACAA 58.820 52.381 0.00 0.00 0.00 2.41
5085 10417 2.167487 GTCTCCTTCCTCTGGCTACAAG 59.833 54.545 0.00 0.00 0.00 3.16
5086 10418 0.905357 TCCTTCCTCTGGCTACAAGC 59.095 55.000 0.00 0.00 41.46 4.01
5095 10427 4.504132 GCTACAAGCCCTCGTCAG 57.496 61.111 0.00 0.00 34.48 3.51
5096 10428 1.592223 GCTACAAGCCCTCGTCAGT 59.408 57.895 0.00 0.00 34.48 3.41
5097 10429 0.458716 GCTACAAGCCCTCGTCAGTC 60.459 60.000 0.00 0.00 34.48 3.51
5098 10430 0.173708 CTACAAGCCCTCGTCAGTCC 59.826 60.000 0.00 0.00 0.00 3.85
5099 10431 0.251653 TACAAGCCCTCGTCAGTCCT 60.252 55.000 0.00 0.00 0.00 3.85
5100 10432 1.216710 CAAGCCCTCGTCAGTCCTC 59.783 63.158 0.00 0.00 0.00 3.71
5101 10433 1.077625 AAGCCCTCGTCAGTCCTCT 59.922 57.895 0.00 0.00 0.00 3.69
5102 10434 0.543174 AAGCCCTCGTCAGTCCTCTT 60.543 55.000 0.00 0.00 0.00 2.85
5103 10435 0.968393 AGCCCTCGTCAGTCCTCTTC 60.968 60.000 0.00 0.00 0.00 2.87
5104 10436 1.803943 CCCTCGTCAGTCCTCTTCG 59.196 63.158 0.00 0.00 0.00 3.79
5105 10437 0.677098 CCCTCGTCAGTCCTCTTCGA 60.677 60.000 0.00 0.00 0.00 3.71
5106 10438 1.166129 CCTCGTCAGTCCTCTTCGAA 58.834 55.000 0.00 0.00 31.28 3.71
5107 10439 1.131504 CCTCGTCAGTCCTCTTCGAAG 59.868 57.143 19.35 19.35 31.28 3.79
5108 10440 1.131504 CTCGTCAGTCCTCTTCGAAGG 59.868 57.143 24.37 11.16 37.81 3.46
5109 10441 0.882474 CGTCAGTCCTCTTCGAAGGT 59.118 55.000 24.37 2.55 37.69 3.50
5110 10442 1.401670 CGTCAGTCCTCTTCGAAGGTG 60.402 57.143 24.37 16.67 37.69 4.00
5111 10443 1.614413 GTCAGTCCTCTTCGAAGGTGT 59.386 52.381 24.37 3.25 37.69 4.16
5112 10444 2.036089 GTCAGTCCTCTTCGAAGGTGTT 59.964 50.000 24.37 4.98 37.69 3.32
5113 10445 2.698797 TCAGTCCTCTTCGAAGGTGTTT 59.301 45.455 24.37 6.02 37.69 2.83
5114 10446 2.802816 CAGTCCTCTTCGAAGGTGTTTG 59.197 50.000 24.37 13.75 37.69 2.93
5115 10447 2.698797 AGTCCTCTTCGAAGGTGTTTGA 59.301 45.455 24.37 9.58 37.69 2.69
5116 10448 3.134081 AGTCCTCTTCGAAGGTGTTTGAA 59.866 43.478 24.37 2.10 37.69 2.69
5123 10455 5.611796 TTCGAAGGTGTTTGAAGATCATG 57.388 39.130 0.00 0.00 32.00 3.07
5124 10456 3.436704 TCGAAGGTGTTTGAAGATCATGC 59.563 43.478 0.00 0.00 0.00 4.06
5125 10457 3.438087 CGAAGGTGTTTGAAGATCATGCT 59.562 43.478 0.00 0.00 0.00 3.79
5126 10458 4.083110 CGAAGGTGTTTGAAGATCATGCTT 60.083 41.667 0.00 0.00 0.00 3.91
5127 10459 5.563475 CGAAGGTGTTTGAAGATCATGCTTT 60.563 40.000 0.00 0.00 0.00 3.51
5128 10460 5.130292 AGGTGTTTGAAGATCATGCTTTG 57.870 39.130 0.00 0.00 0.00 2.77
5129 10461 4.021719 AGGTGTTTGAAGATCATGCTTTGG 60.022 41.667 0.00 0.00 0.00 3.28
5130 10462 4.022068 GGTGTTTGAAGATCATGCTTTGGA 60.022 41.667 0.00 0.00 0.00 3.53
5131 10463 5.509501 GGTGTTTGAAGATCATGCTTTGGAA 60.510 40.000 0.00 0.00 0.00 3.53
5132 10464 5.632347 GTGTTTGAAGATCATGCTTTGGAAG 59.368 40.000 0.00 0.00 0.00 3.46
5133 10465 5.166398 GTTTGAAGATCATGCTTTGGAAGG 58.834 41.667 0.00 0.00 0.00 3.46
5134 10466 3.359033 TGAAGATCATGCTTTGGAAGGG 58.641 45.455 0.00 0.00 0.00 3.95
5135 10467 3.245371 TGAAGATCATGCTTTGGAAGGGT 60.245 43.478 0.00 0.00 0.00 4.34
5136 10468 3.010200 AGATCATGCTTTGGAAGGGTC 57.990 47.619 0.00 0.00 0.00 4.46
5137 10469 2.309755 AGATCATGCTTTGGAAGGGTCA 59.690 45.455 0.00 0.00 0.00 4.02
5138 10470 2.905415 TCATGCTTTGGAAGGGTCAT 57.095 45.000 0.00 0.00 0.00 3.06
5139 10471 2.726821 TCATGCTTTGGAAGGGTCATC 58.273 47.619 0.00 0.00 0.00 2.92
5140 10472 2.041485 TCATGCTTTGGAAGGGTCATCA 59.959 45.455 0.00 0.00 0.00 3.07
5141 10473 2.905415 TGCTTTGGAAGGGTCATCAT 57.095 45.000 0.00 0.00 0.00 2.45
5142 10474 4.079844 TCATGCTTTGGAAGGGTCATCATA 60.080 41.667 0.00 0.00 0.00 2.15
5143 10475 3.889815 TGCTTTGGAAGGGTCATCATAG 58.110 45.455 0.00 0.00 0.00 2.23
5144 10476 3.266772 TGCTTTGGAAGGGTCATCATAGT 59.733 43.478 0.00 0.00 0.00 2.12
5145 10477 4.263905 TGCTTTGGAAGGGTCATCATAGTT 60.264 41.667 0.00 0.00 0.00 2.24
5146 10478 4.706962 GCTTTGGAAGGGTCATCATAGTTT 59.293 41.667 0.00 0.00 0.00 2.66
5147 10479 5.885912 GCTTTGGAAGGGTCATCATAGTTTA 59.114 40.000 0.00 0.00 0.00 2.01
5148 10480 6.377146 GCTTTGGAAGGGTCATCATAGTTTAA 59.623 38.462 0.00 0.00 0.00 1.52
5149 10481 7.093945 GCTTTGGAAGGGTCATCATAGTTTAAA 60.094 37.037 0.00 0.00 0.00 1.52
5150 10482 8.713708 TTTGGAAGGGTCATCATAGTTTAAAA 57.286 30.769 0.00 0.00 0.00 1.52
5151 10483 8.893563 TTGGAAGGGTCATCATAGTTTAAAAT 57.106 30.769 0.00 0.00 0.00 1.82
5152 10484 8.893563 TGGAAGGGTCATCATAGTTTAAAATT 57.106 30.769 0.00 0.00 0.00 1.82
5153 10485 8.966868 TGGAAGGGTCATCATAGTTTAAAATTC 58.033 33.333 0.00 0.00 0.00 2.17
5154 10486 8.414003 GGAAGGGTCATCATAGTTTAAAATTCC 58.586 37.037 0.00 0.00 0.00 3.01
5155 10487 8.893563 AAGGGTCATCATAGTTTAAAATTCCA 57.106 30.769 0.00 0.00 0.00 3.53
5156 10488 9.492730 AAGGGTCATCATAGTTTAAAATTCCAT 57.507 29.630 0.00 0.00 0.00 3.41
5157 10489 9.136323 AGGGTCATCATAGTTTAAAATTCCATC 57.864 33.333 0.00 0.00 0.00 3.51
5158 10490 8.912988 GGGTCATCATAGTTTAAAATTCCATCA 58.087 33.333 0.00 0.00 0.00 3.07
5168 10500 8.998377 AGTTTAAAATTCCATCAAAATTTCCCG 58.002 29.630 0.00 0.00 35.75 5.14
5169 10501 8.994170 GTTTAAAATTCCATCAAAATTTCCCGA 58.006 29.630 0.00 0.00 35.75 5.14
5170 10502 9.561069 TTTAAAATTCCATCAAAATTTCCCGAA 57.439 25.926 0.00 0.00 35.75 4.30
5171 10503 7.671495 AAAATTCCATCAAAATTTCCCGAAG 57.329 32.000 0.00 0.00 35.75 3.79
5172 10504 6.358974 AATTCCATCAAAATTTCCCGAAGT 57.641 33.333 0.00 0.00 0.00 3.01
5173 10505 5.799827 TTCCATCAAAATTTCCCGAAGTT 57.200 34.783 0.00 0.00 0.00 2.66
5174 10506 5.799827 TCCATCAAAATTTCCCGAAGTTT 57.200 34.783 0.00 0.00 36.07 2.66
5175 10507 5.778862 TCCATCAAAATTTCCCGAAGTTTC 58.221 37.500 0.00 0.00 33.62 2.78
5176 10508 5.303078 TCCATCAAAATTTCCCGAAGTTTCA 59.697 36.000 0.00 0.00 33.62 2.69
5177 10509 5.988561 CCATCAAAATTTCCCGAAGTTTCAA 59.011 36.000 0.00 0.00 33.62 2.69
5178 10510 6.073819 CCATCAAAATTTCCCGAAGTTTCAAC 60.074 38.462 0.00 0.00 33.62 3.18
5179 10511 5.967088 TCAAAATTTCCCGAAGTTTCAACA 58.033 33.333 0.00 0.00 33.62 3.33
5180 10512 6.398918 TCAAAATTTCCCGAAGTTTCAACAA 58.601 32.000 0.00 0.00 33.62 2.83
5181 10513 7.044798 TCAAAATTTCCCGAAGTTTCAACAAT 58.955 30.769 0.00 0.00 33.62 2.71
5182 10514 7.550906 TCAAAATTTCCCGAAGTTTCAACAATT 59.449 29.630 0.00 0.00 33.62 2.32
5183 10515 7.857734 AAATTTCCCGAAGTTTCAACAATTT 57.142 28.000 0.00 0.00 0.00 1.82
5184 10516 7.477144 AATTTCCCGAAGTTTCAACAATTTC 57.523 32.000 0.00 0.00 0.00 2.17
5185 10517 5.845391 TTCCCGAAGTTTCAACAATTTCT 57.155 34.783 0.00 0.00 0.00 2.52
5452 10784 9.880157 ATCTGATTAAATCAAAATGGTTTCCAG 57.120 29.630 0.00 0.78 39.11 3.86
5453 10785 8.869109 TCTGATTAAATCAAAATGGTTTCCAGT 58.131 29.630 0.00 0.00 39.11 4.00
5456 10788 9.087424 GATTAAATCAAAATGGTTTCCAGTAGC 57.913 33.333 0.00 0.00 36.75 3.58
5457 10789 4.701956 ATCAAAATGGTTTCCAGTAGCG 57.298 40.909 0.00 0.00 36.75 4.26
5458 10790 2.227865 TCAAAATGGTTTCCAGTAGCGC 59.772 45.455 0.00 0.00 36.75 5.92
5459 10791 1.904287 AAATGGTTTCCAGTAGCGCA 58.096 45.000 11.47 0.00 36.75 6.09
5460 10792 1.453155 AATGGTTTCCAGTAGCGCAG 58.547 50.000 11.47 0.00 36.75 5.18
5461 10793 0.324943 ATGGTTTCCAGTAGCGCAGT 59.675 50.000 11.47 0.00 36.75 4.40
5462 10794 0.602638 TGGTTTCCAGTAGCGCAGTG 60.603 55.000 11.47 8.91 0.00 3.66
5464 10796 0.602905 GTTTCCAGTAGCGCAGTGGT 60.603 55.000 23.94 2.87 46.58 4.16
5465 10797 0.107831 TTTCCAGTAGCGCAGTGGTT 59.892 50.000 23.94 2.19 46.58 3.67
5466 10798 0.320421 TTCCAGTAGCGCAGTGGTTC 60.320 55.000 23.94 0.00 46.58 3.62
5467 10799 2.094659 CCAGTAGCGCAGTGGTTCG 61.095 63.158 19.53 0.00 42.18 3.95
5504 10836 5.337578 TTTTGGCCAAATTATGTCCTAGC 57.662 39.130 30.78 0.00 0.00 3.42
5505 10837 3.951563 TGGCCAAATTATGTCCTAGCT 57.048 42.857 0.61 0.00 0.00 3.32
5506 10838 3.554934 TGGCCAAATTATGTCCTAGCTG 58.445 45.455 0.61 0.00 0.00 4.24
5507 10839 3.201930 TGGCCAAATTATGTCCTAGCTGA 59.798 43.478 0.61 0.00 0.00 4.26
5508 10840 3.817647 GGCCAAATTATGTCCTAGCTGAG 59.182 47.826 0.00 0.00 0.00 3.35
5509 10841 4.444876 GGCCAAATTATGTCCTAGCTGAGA 60.445 45.833 0.00 0.00 0.00 3.27
5510 10842 5.312079 GCCAAATTATGTCCTAGCTGAGAT 58.688 41.667 0.00 0.00 0.00 2.75
5511 10843 5.767168 GCCAAATTATGTCCTAGCTGAGATT 59.233 40.000 0.00 0.00 0.00 2.40
5512 10844 6.264067 GCCAAATTATGTCCTAGCTGAGATTT 59.736 38.462 0.00 0.00 0.00 2.17
5513 10845 7.646314 CCAAATTATGTCCTAGCTGAGATTTG 58.354 38.462 0.00 0.71 33.84 2.32
5514 10846 7.500227 CCAAATTATGTCCTAGCTGAGATTTGA 59.500 37.037 0.00 0.00 35.22 2.69
5515 10847 8.896744 CAAATTATGTCCTAGCTGAGATTTGAA 58.103 33.333 0.00 0.00 35.22 2.69
5516 10848 8.443953 AATTATGTCCTAGCTGAGATTTGAAC 57.556 34.615 0.00 0.00 0.00 3.18
5517 10849 5.690464 ATGTCCTAGCTGAGATTTGAACT 57.310 39.130 0.00 0.00 0.00 3.01
5518 10850 4.825422 TGTCCTAGCTGAGATTTGAACTG 58.175 43.478 0.00 0.00 0.00 3.16
5519 10851 3.620821 GTCCTAGCTGAGATTTGAACTGC 59.379 47.826 0.00 0.00 0.00 4.40
5520 10852 2.606725 CCTAGCTGAGATTTGAACTGCG 59.393 50.000 0.00 0.00 34.59 5.18
5521 10853 1.446907 AGCTGAGATTTGAACTGCGG 58.553 50.000 0.00 0.00 34.59 5.69
5522 10854 0.179179 GCTGAGATTTGAACTGCGGC 60.179 55.000 0.00 0.00 0.00 6.53
5523 10855 0.449388 CTGAGATTTGAACTGCGGCC 59.551 55.000 0.00 0.00 0.00 6.13
5524 10856 0.250684 TGAGATTTGAACTGCGGCCA 60.251 50.000 2.24 0.00 0.00 5.36
5525 10857 0.449388 GAGATTTGAACTGCGGCCAG 59.551 55.000 2.24 0.00 44.80 4.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.394115 GGGATTGATGCGTTCCAACTTAATT 60.394 40.000 0.00 0.00 0.00 1.40
1 2 4.097892 GGGATTGATGCGTTCCAACTTAAT 59.902 41.667 0.00 0.00 0.00 1.40
15 16 6.058553 TGGCTAGATTAGATGGGATTGATG 57.941 41.667 0.00 0.00 0.00 3.07
28 29 6.150641 GTCATAGACGTACCATGGCTAGATTA 59.849 42.308 13.04 0.00 0.00 1.75
30 31 4.459685 GTCATAGACGTACCATGGCTAGAT 59.540 45.833 13.04 0.00 0.00 1.98
53 54 9.539139 CCGTTACGTTGTCAATATATACTCTAG 57.461 37.037 3.52 0.00 0.00 2.43
55 56 6.860023 GCCGTTACGTTGTCAATATATACTCT 59.140 38.462 3.52 0.00 0.00 3.24
63 64 1.348276 CGGCCGTTACGTTGTCAATA 58.652 50.000 19.50 0.00 0.00 1.90
64 65 1.293267 CCGGCCGTTACGTTGTCAAT 61.293 55.000 26.12 0.00 0.00 2.57
96 97 4.805192 GTGCTTCAACAAAATCAGCAAGAA 59.195 37.500 0.00 0.00 42.00 2.52
133 134 1.272490 CACCAAGAGCCGTAGAACTGA 59.728 52.381 0.00 0.00 0.00 3.41
134 135 1.272490 TCACCAAGAGCCGTAGAACTG 59.728 52.381 0.00 0.00 0.00 3.16
181 182 1.199327 CTTTGCTGTGGATGCTGACAG 59.801 52.381 0.00 0.00 42.18 3.51
215 219 0.248743 TACGACAATAGCCGCTTCCG 60.249 55.000 0.00 0.00 0.00 4.30
233 237 3.491766 AGAGAAGTGACCCAAGGGATA 57.508 47.619 13.15 0.00 38.96 2.59
286 293 6.548993 TGGCCAACTTGAAATATATATGCACA 59.451 34.615 0.61 0.00 0.00 4.57
287 294 6.980593 TGGCCAACTTGAAATATATATGCAC 58.019 36.000 0.61 0.00 0.00 4.57
327 334 2.465774 TGCTATGCGCATCAAACGT 58.534 47.368 29.11 3.98 45.47 3.99
339 346 4.518970 ACCTACCGGCAAAAATATGCTATG 59.481 41.667 0.00 0.00 45.68 2.23
341 348 3.880490 CACCTACCGGCAAAAATATGCTA 59.120 43.478 0.00 0.00 45.68 3.49
380 387 4.508551 TGATTGTGACTTGCCTCCATAT 57.491 40.909 0.00 0.00 0.00 1.78
381 388 3.998913 TGATTGTGACTTGCCTCCATA 57.001 42.857 0.00 0.00 0.00 2.74
382 389 2.885135 TGATTGTGACTTGCCTCCAT 57.115 45.000 0.00 0.00 0.00 3.41
418 425 0.543646 AAAAGGAATGCCAGCCAGCT 60.544 50.000 0.00 0.00 36.29 4.24
425 432 4.901250 AGAAAAAGAGGAAAAGGAATGCCA 59.099 37.500 0.00 0.00 36.29 4.92
433 440 7.390162 ACTGCTCATCTAGAAAAAGAGGAAAAG 59.610 37.037 0.00 0.00 36.00 2.27
508 524 2.688958 GCAGGACCTTGACGTATACTCT 59.311 50.000 0.56 0.00 0.00 3.24
542 586 5.242434 TGACAATTTTACCACGTAGATGCT 58.758 37.500 0.00 0.00 0.00 3.79
596 809 8.792830 TTGACTTATCATTTTTACCTCCTCTG 57.207 34.615 0.00 0.00 33.85 3.35
656 873 0.107165 GGCCACCTATCTCAACACCC 60.107 60.000 0.00 0.00 0.00 4.61
662 879 1.573857 TGGACTAGGCCACCTATCTCA 59.426 52.381 15.37 0.00 35.36 3.27
699 918 8.964476 TGTATTTTTCTATCTTCATGAGGGAC 57.036 34.615 4.83 0.00 0.00 4.46
706 925 8.619546 GCTGCTCTTGTATTTTTCTATCTTCAT 58.380 33.333 0.00 0.00 0.00 2.57
739 958 0.472471 AAGGTCACATGAACACCGGT 59.528 50.000 0.00 0.00 35.13 5.28
775 997 8.862325 ACTCCTGTATTAATCAATGTTCACAA 57.138 30.769 0.00 0.00 0.00 3.33
782 1004 9.613428 TCAAACCTACTCCTGTATTAATCAATG 57.387 33.333 0.00 0.00 0.00 2.82
808 1030 2.362736 CACATGGCTGTCTATGTGCTT 58.637 47.619 12.65 0.00 45.09 3.91
836 1058 1.938585 TCCCTCGTGGTGAAGATTCT 58.061 50.000 2.33 0.00 34.77 2.40
843 1065 1.639722 TGATCTTTCCCTCGTGGTGA 58.360 50.000 2.33 0.00 34.77 4.02
849 1071 7.715249 TCTTATAATTGGTTGATCTTTCCCTCG 59.285 37.037 0.00 0.00 0.00 4.63
860 1113 7.309133 CCAACTTGTGCTCTTATAATTGGTTGA 60.309 37.037 0.00 0.00 33.41 3.18
880 1135 4.874199 TCCCCTTTCTGTTTAACCAACTT 58.126 39.130 0.00 0.00 36.21 2.66
882 1137 4.466827 TCTCCCCTTTCTGTTTAACCAAC 58.533 43.478 0.00 0.00 35.71 3.77
900 1155 8.674607 TCTTAAAACAACTTCAAAGTCTTCTCC 58.325 33.333 0.00 0.00 38.57 3.71
913 1168 3.625764 TCAGCGCACTCTTAAAACAACTT 59.374 39.130 11.47 0.00 0.00 2.66
946 1201 0.768221 TTGAGGTTGGCTGTCCTCCT 60.768 55.000 16.08 0.00 46.76 3.69
951 1206 2.034685 GGAGTTTTTGAGGTTGGCTGTC 59.965 50.000 0.00 0.00 0.00 3.51
955 1210 2.483013 GGTTGGAGTTTTTGAGGTTGGC 60.483 50.000 0.00 0.00 0.00 4.52
967 1222 2.764010 GGTTTGGAAGTTGGTTGGAGTT 59.236 45.455 0.00 0.00 0.00 3.01
1054 3031 2.584835 TCCTCCTTGTTCAACCCATG 57.415 50.000 0.00 0.00 0.00 3.66
1060 3037 2.225091 ACATGGCATCCTCCTTGTTCAA 60.225 45.455 0.00 0.00 40.34 2.69
1125 3102 1.622607 TACCAGCTGGGGATTGGTCG 61.623 60.000 35.42 7.71 43.82 4.79
1308 3291 6.600822 CCTCTTCTACATCACCAACAATTGAT 59.399 38.462 13.59 0.00 32.44 2.57
1420 3403 0.820226 TCCTCCTGATTCTGTGCGAG 59.180 55.000 0.00 0.00 0.00 5.03
1485 3468 1.903404 CGCAAACAGAAGCCCCCTT 60.903 57.895 0.00 0.00 0.00 3.95
1582 3565 2.772739 CACCCTCATGTGCAGCTAC 58.227 57.895 0.00 0.00 0.00 3.58
1592 3575 0.036952 CTTCGTGTCAGCACCCTCAT 60.037 55.000 0.00 0.00 42.39 2.90
1695 3678 3.446516 GCAATGCTCTTCTTTCCTTCCAT 59.553 43.478 0.00 0.00 0.00 3.41
1696 3679 2.821969 GCAATGCTCTTCTTTCCTTCCA 59.178 45.455 0.00 0.00 0.00 3.53
1704 3687 3.505464 GCATCAAGCAATGCTCTTCTT 57.495 42.857 8.71 0.00 46.81 2.52
1736 3722 7.241042 TCTTCCTTATTCTTTTCTTCTCCGA 57.759 36.000 0.00 0.00 0.00 4.55
2065 4098 7.709149 ATGCTAAAGTTAGGCTCAAAATTCT 57.291 32.000 0.00 0.00 0.00 2.40
2202 4762 1.084935 TGTGTGCGTGCGTTTGTACT 61.085 50.000 0.00 0.00 0.00 2.73
2224 4796 1.466167 GCGCCTATGTATCATGCCTTG 59.534 52.381 0.00 0.00 0.00 3.61
2376 4948 0.467290 GTTGTGTTGCTCCAGGGGAA 60.467 55.000 0.00 0.00 0.00 3.97
2515 5153 5.758296 TCCTTTGATCGAGCATATAACAACC 59.242 40.000 3.25 0.00 0.00 3.77
2516 5154 6.480320 ACTCCTTTGATCGAGCATATAACAAC 59.520 38.462 3.25 0.00 0.00 3.32
2517 5155 6.479990 CACTCCTTTGATCGAGCATATAACAA 59.520 38.462 3.25 0.00 0.00 2.83
2519 5157 5.986135 ACACTCCTTTGATCGAGCATATAAC 59.014 40.000 3.25 0.00 0.00 1.89
2712 5942 9.848710 AGATATGTGAGATGATGAAAATGAAGT 57.151 29.630 0.00 0.00 0.00 3.01
2767 5997 0.771127 GGCCCCTACTTATGATGCCA 59.229 55.000 0.00 0.00 37.36 4.92
2841 6077 3.773860 AAACATGCACTCGTTTGAACA 57.226 38.095 9.29 0.00 34.16 3.18
3049 6410 8.745149 AGAGAACTATATCTACTACTCCCTCA 57.255 38.462 0.00 0.00 0.00 3.86
3280 8578 0.307760 CAAAGTGAAGCGGCGTTCTT 59.692 50.000 9.37 3.76 0.00 2.52
3393 8691 7.217258 CGAATACTATCTTGAGCATCGATGTAC 59.783 40.741 25.47 18.99 38.61 2.90
3730 9028 2.131023 AGATTCACCTCAGGATTCCCC 58.869 52.381 0.00 0.00 0.00 4.81
3776 9074 5.471424 ACTGATGGATAGATCAAAGGGAGA 58.529 41.667 0.00 0.00 31.90 3.71
3881 9186 5.217978 ACCAAATGAAGCAATGTGTCATT 57.782 34.783 7.43 7.43 42.38 2.57
4062 9369 1.135859 GTGTTGCATCTTTCAGCCTCG 60.136 52.381 0.00 0.00 0.00 4.63
4130 9439 0.542702 CCAGGGATGGCAAAGGTTGT 60.543 55.000 0.00 0.00 0.00 3.32
4135 9444 0.040204 AACCTCCAGGGATGGCAAAG 59.960 55.000 0.00 0.00 40.27 2.77
4258 9570 1.135286 GTGAAGCCAATTGTAGCCAGC 60.135 52.381 4.43 0.00 0.00 4.85
4261 9573 1.165270 ACGTGAAGCCAATTGTAGCC 58.835 50.000 4.43 0.00 0.00 3.93
4267 9579 2.017049 GCAGGATACGTGAAGCCAATT 58.983 47.619 0.00 0.00 46.39 2.32
4281 9593 5.025453 AGTTAACCATTGGATTTGCAGGAT 58.975 37.500 10.37 0.00 0.00 3.24
4338 9660 2.065993 TGAACTCGAGAAGGAAAGCG 57.934 50.000 21.68 0.00 0.00 4.68
4375 9697 0.895100 ACACACCCAGCGCAAATGAT 60.895 50.000 11.47 0.00 0.00 2.45
4484 9806 7.742963 TCGTGCAAGAATAACGAATTTAGAAAC 59.257 33.333 0.00 0.00 42.83 2.78
4495 9817 3.740044 AATGGTCGTGCAAGAATAACG 57.260 42.857 3.20 0.00 38.64 3.18
4523 9845 1.074727 TCCTTTGAATCGGCCCTTTCA 59.925 47.619 10.23 10.23 0.00 2.69
4531 9853 6.699575 AATTCTACCATTCCTTTGAATCGG 57.300 37.500 0.00 0.00 39.20 4.18
4683 10014 1.202758 AGTTCCGGACAAGAACATGCA 60.203 47.619 1.83 0.00 44.91 3.96
4757 10089 6.388619 AGCCAGGTTCTAAATCTTTAGGAA 57.611 37.500 9.26 1.85 40.35 3.36
4766 10098 6.670695 AAAATGACAAGCCAGGTTCTAAAT 57.329 33.333 0.00 0.00 0.00 1.40
4769 10101 5.385198 AGAAAAATGACAAGCCAGGTTCTA 58.615 37.500 0.00 0.00 0.00 2.10
4812 10144 9.450807 GCAACACTTCCATTATACAATTCATAC 57.549 33.333 0.00 0.00 0.00 2.39
4813 10145 9.183368 TGCAACACTTCCATTATACAATTCATA 57.817 29.630 0.00 0.00 0.00 2.15
4814 10146 8.065473 TGCAACACTTCCATTATACAATTCAT 57.935 30.769 0.00 0.00 0.00 2.57
4815 10147 7.459795 TGCAACACTTCCATTATACAATTCA 57.540 32.000 0.00 0.00 0.00 2.57
4816 10148 8.810427 CATTGCAACACTTCCATTATACAATTC 58.190 33.333 0.00 0.00 0.00 2.17
4817 10149 7.765360 CCATTGCAACACTTCCATTATACAATT 59.235 33.333 0.00 0.00 0.00 2.32
4818 10150 7.093377 ACCATTGCAACACTTCCATTATACAAT 60.093 33.333 0.00 0.00 0.00 2.71
4819 10151 6.210385 ACCATTGCAACACTTCCATTATACAA 59.790 34.615 0.00 0.00 0.00 2.41
4820 10152 5.714333 ACCATTGCAACACTTCCATTATACA 59.286 36.000 0.00 0.00 0.00 2.29
4821 10153 6.207691 ACCATTGCAACACTTCCATTATAC 57.792 37.500 0.00 0.00 0.00 1.47
4822 10154 6.127479 GGAACCATTGCAACACTTCCATTATA 60.127 38.462 19.19 0.00 0.00 0.98
4823 10155 5.337491 GGAACCATTGCAACACTTCCATTAT 60.337 40.000 19.19 0.00 0.00 1.28
4824 10156 4.021544 GGAACCATTGCAACACTTCCATTA 60.022 41.667 19.19 0.00 0.00 1.90
4825 10157 3.244181 GGAACCATTGCAACACTTCCATT 60.244 43.478 19.19 1.62 0.00 3.16
4826 10158 2.299867 GGAACCATTGCAACACTTCCAT 59.700 45.455 19.19 0.00 0.00 3.41
4827 10159 1.686052 GGAACCATTGCAACACTTCCA 59.314 47.619 19.19 0.00 0.00 3.53
4828 10160 2.438868 GGAACCATTGCAACACTTCC 57.561 50.000 0.00 8.15 0.00 3.46
4843 10175 8.887036 AACAATTATTTTGAAACTGAGGGAAC 57.113 30.769 0.00 0.00 0.00 3.62
4844 10176 9.898152 AAAACAATTATTTTGAAACTGAGGGAA 57.102 25.926 0.00 0.00 30.56 3.97
4881 10213 9.498176 GGTCCTAAAATAAGTGTCTCAACTTTA 57.502 33.333 0.00 0.00 40.77 1.85
4882 10214 7.172703 CGGTCCTAAAATAAGTGTCTCAACTTT 59.827 37.037 0.00 0.00 40.77 2.66
4883 10215 6.649557 CGGTCCTAAAATAAGTGTCTCAACTT 59.350 38.462 0.00 0.00 42.89 2.66
4884 10216 6.014840 TCGGTCCTAAAATAAGTGTCTCAACT 60.015 38.462 0.00 0.00 0.00 3.16
4885 10217 6.161381 TCGGTCCTAAAATAAGTGTCTCAAC 58.839 40.000 0.00 0.00 0.00 3.18
4886 10218 6.209986 TCTCGGTCCTAAAATAAGTGTCTCAA 59.790 38.462 0.00 0.00 0.00 3.02
4887 10219 5.713389 TCTCGGTCCTAAAATAAGTGTCTCA 59.287 40.000 0.00 0.00 0.00 3.27
4888 10220 6.205101 TCTCGGTCCTAAAATAAGTGTCTC 57.795 41.667 0.00 0.00 0.00 3.36
4889 10221 6.210984 ACTTCTCGGTCCTAAAATAAGTGTCT 59.789 38.462 0.00 0.00 0.00 3.41
4890 10222 6.396450 ACTTCTCGGTCCTAAAATAAGTGTC 58.604 40.000 0.00 0.00 0.00 3.67
4891 10223 6.356186 ACTTCTCGGTCCTAAAATAAGTGT 57.644 37.500 0.00 0.00 0.00 3.55
4924 10256 8.458843 CGGAGAGAACCATTGTAACAATTATTT 58.541 33.333 0.00 0.00 0.00 1.40
4925 10257 7.610305 ACGGAGAGAACCATTGTAACAATTATT 59.390 33.333 0.00 0.00 0.00 1.40
4926 10258 7.110155 ACGGAGAGAACCATTGTAACAATTAT 58.890 34.615 0.00 0.00 0.00 1.28
4927 10259 6.469410 ACGGAGAGAACCATTGTAACAATTA 58.531 36.000 0.00 0.00 0.00 1.40
4928 10260 5.313712 ACGGAGAGAACCATTGTAACAATT 58.686 37.500 0.00 0.00 0.00 2.32
4929 10261 4.906618 ACGGAGAGAACCATTGTAACAAT 58.093 39.130 0.00 0.00 0.00 2.71
4930 10262 4.312443 GACGGAGAGAACCATTGTAACAA 58.688 43.478 0.00 0.00 0.00 2.83
4931 10263 3.306502 GGACGGAGAGAACCATTGTAACA 60.307 47.826 0.00 0.00 0.00 2.41
4932 10264 3.259902 GGACGGAGAGAACCATTGTAAC 58.740 50.000 0.00 0.00 0.00 2.50
4933 10265 2.235402 GGGACGGAGAGAACCATTGTAA 59.765 50.000 0.00 0.00 0.00 2.41
4934 10266 1.829222 GGGACGGAGAGAACCATTGTA 59.171 52.381 0.00 0.00 0.00 2.41
4935 10267 0.613777 GGGACGGAGAGAACCATTGT 59.386 55.000 0.00 0.00 0.00 2.71
4936 10268 0.613260 TGGGACGGAGAGAACCATTG 59.387 55.000 0.00 0.00 0.00 2.82
4937 10269 1.358152 TTGGGACGGAGAGAACCATT 58.642 50.000 0.00 0.00 0.00 3.16
4938 10270 1.358152 TTTGGGACGGAGAGAACCAT 58.642 50.000 0.00 0.00 0.00 3.55
4939 10271 1.133363 TTTTGGGACGGAGAGAACCA 58.867 50.000 0.00 0.00 0.00 3.67
4940 10272 2.491675 ATTTTGGGACGGAGAGAACC 57.508 50.000 0.00 0.00 0.00 3.62
4941 10273 4.828829 TCTTATTTTGGGACGGAGAGAAC 58.171 43.478 0.00 0.00 0.00 3.01
4942 10274 4.081087 CCTCTTATTTTGGGACGGAGAGAA 60.081 45.833 0.00 0.00 32.88 2.87
4943 10275 3.451178 CCTCTTATTTTGGGACGGAGAGA 59.549 47.826 0.00 0.00 32.88 3.10
4944 10276 3.451178 TCCTCTTATTTTGGGACGGAGAG 59.549 47.826 0.00 0.00 0.00 3.20
4945 10277 3.446968 TCCTCTTATTTTGGGACGGAGA 58.553 45.455 0.00 0.00 0.00 3.71
4946 10278 3.906720 TCCTCTTATTTTGGGACGGAG 57.093 47.619 0.00 0.00 0.00 4.63
4947 10279 4.855298 ATTCCTCTTATTTTGGGACGGA 57.145 40.909 0.00 0.00 0.00 4.69
4948 10280 4.947388 TCAATTCCTCTTATTTTGGGACGG 59.053 41.667 0.00 0.00 0.00 4.79
4949 10281 6.509418 TTCAATTCCTCTTATTTTGGGACG 57.491 37.500 0.00 0.00 0.00 4.79
4971 10303 9.908152 GGTTGCAACTATCTAAGTTTGTTAATT 57.092 29.630 27.64 0.00 46.61 1.40
4972 10304 9.297037 AGGTTGCAACTATCTAAGTTTGTTAAT 57.703 29.630 27.64 0.00 46.61 1.40
4973 10305 8.685838 AGGTTGCAACTATCTAAGTTTGTTAA 57.314 30.769 27.64 0.00 46.61 2.01
4974 10306 8.685838 AAGGTTGCAACTATCTAAGTTTGTTA 57.314 30.769 27.64 0.00 46.61 2.41
4975 10307 7.284489 TGAAGGTTGCAACTATCTAAGTTTGTT 59.716 33.333 27.64 0.62 46.61 2.83
4976 10308 6.770785 TGAAGGTTGCAACTATCTAAGTTTGT 59.229 34.615 27.64 1.31 46.61 2.83
4977 10309 7.041098 AGTGAAGGTTGCAACTATCTAAGTTTG 60.041 37.037 27.64 0.00 46.61 2.93
4978 10310 6.998673 AGTGAAGGTTGCAACTATCTAAGTTT 59.001 34.615 27.64 9.30 46.61 2.66
4980 10312 6.115448 AGTGAAGGTTGCAACTATCTAAGT 57.885 37.500 27.64 11.70 41.49 2.24
4981 10313 9.469807 CTATAGTGAAGGTTGCAACTATCTAAG 57.530 37.037 27.64 16.26 0.00 2.18
4982 10314 8.978472 ACTATAGTGAAGGTTGCAACTATCTAA 58.022 33.333 27.64 14.96 0.00 2.10
4983 10315 8.534954 ACTATAGTGAAGGTTGCAACTATCTA 57.465 34.615 27.64 20.51 0.00 1.98
4984 10316 7.425224 ACTATAGTGAAGGTTGCAACTATCT 57.575 36.000 27.64 19.30 0.00 1.98
4985 10317 6.418226 CGACTATAGTGAAGGTTGCAACTATC 59.582 42.308 27.64 23.73 0.00 2.08
4986 10318 6.273825 CGACTATAGTGAAGGTTGCAACTAT 58.726 40.000 27.64 18.24 0.00 2.12
4987 10319 5.393787 CCGACTATAGTGAAGGTTGCAACTA 60.394 44.000 27.64 12.47 0.00 2.24
4988 10320 4.495422 CGACTATAGTGAAGGTTGCAACT 58.505 43.478 27.64 10.40 0.00 3.16
4989 10321 3.617263 CCGACTATAGTGAAGGTTGCAAC 59.383 47.826 21.59 21.59 0.00 4.17
4990 10322 3.369052 CCCGACTATAGTGAAGGTTGCAA 60.369 47.826 10.90 0.00 0.00 4.08
4991 10323 2.167693 CCCGACTATAGTGAAGGTTGCA 59.832 50.000 10.90 0.00 0.00 4.08
4992 10324 2.822764 CCCGACTATAGTGAAGGTTGC 58.177 52.381 10.90 0.00 0.00 4.17
4993 10325 2.483188 GGCCCGACTATAGTGAAGGTTG 60.483 54.545 10.90 1.15 0.00 3.77
4994 10326 1.761198 GGCCCGACTATAGTGAAGGTT 59.239 52.381 10.90 0.00 0.00 3.50
4995 10327 1.063114 AGGCCCGACTATAGTGAAGGT 60.063 52.381 10.90 0.00 0.00 3.50
4996 10328 1.705873 AGGCCCGACTATAGTGAAGG 58.294 55.000 10.90 10.49 0.00 3.46
4997 10329 2.803492 GCAAGGCCCGACTATAGTGAAG 60.803 54.545 10.90 1.45 0.00 3.02
4998 10330 1.138266 GCAAGGCCCGACTATAGTGAA 59.862 52.381 10.90 0.00 0.00 3.18
4999 10331 0.750850 GCAAGGCCCGACTATAGTGA 59.249 55.000 10.90 0.00 0.00 3.41
5000 10332 0.464036 TGCAAGGCCCGACTATAGTG 59.536 55.000 10.90 2.85 0.00 2.74
5001 10333 1.070758 CATGCAAGGCCCGACTATAGT 59.929 52.381 4.68 4.68 0.00 2.12
5002 10334 1.070758 ACATGCAAGGCCCGACTATAG 59.929 52.381 0.00 0.00 0.00 1.31
5003 10335 1.128200 ACATGCAAGGCCCGACTATA 58.872 50.000 0.00 0.00 0.00 1.31
5004 10336 1.070758 CTACATGCAAGGCCCGACTAT 59.929 52.381 0.00 0.00 0.00 2.12
5005 10337 0.464036 CTACATGCAAGGCCCGACTA 59.536 55.000 0.00 0.00 0.00 2.59
5006 10338 1.221840 CTACATGCAAGGCCCGACT 59.778 57.895 0.00 0.00 0.00 4.18
5007 10339 0.676782 AACTACATGCAAGGCCCGAC 60.677 55.000 0.00 0.00 0.00 4.79
5008 10340 0.676466 CAACTACATGCAAGGCCCGA 60.676 55.000 0.00 0.00 0.00 5.14
5009 10341 1.802636 CAACTACATGCAAGGCCCG 59.197 57.895 0.00 0.00 0.00 6.13
5010 10342 1.512694 GCAACTACATGCAAGGCCC 59.487 57.895 0.00 0.00 45.70 5.80
5024 10356 1.360192 GTGTTGGGAGCAGTGCAAC 59.640 57.895 19.20 13.14 0.00 4.17
5025 10357 2.186160 CGTGTTGGGAGCAGTGCAA 61.186 57.895 19.20 0.00 0.00 4.08
5026 10358 2.591429 CGTGTTGGGAGCAGTGCA 60.591 61.111 19.20 0.00 0.00 4.57
5027 10359 3.357079 CCGTGTTGGGAGCAGTGC 61.357 66.667 7.13 7.13 0.00 4.40
5028 10360 1.003355 ATCCGTGTTGGGAGCAGTG 60.003 57.895 0.00 0.00 40.02 3.66
5029 10361 1.003355 CATCCGTGTTGGGAGCAGT 60.003 57.895 0.00 0.00 40.02 4.40
5030 10362 0.321564 TTCATCCGTGTTGGGAGCAG 60.322 55.000 0.00 0.00 40.02 4.24
5031 10363 0.321564 CTTCATCCGTGTTGGGAGCA 60.322 55.000 0.00 0.00 40.02 4.26
5032 10364 1.648467 GCTTCATCCGTGTTGGGAGC 61.648 60.000 0.00 0.00 40.02 4.70
5033 10365 0.321564 TGCTTCATCCGTGTTGGGAG 60.322 55.000 0.00 0.00 40.02 4.30
5034 10366 0.109532 TTGCTTCATCCGTGTTGGGA 59.890 50.000 0.00 0.00 41.17 4.37
5035 10367 0.523072 CTTGCTTCATCCGTGTTGGG 59.477 55.000 0.00 0.00 38.76 4.12
5036 10368 0.523072 CCTTGCTTCATCCGTGTTGG 59.477 55.000 0.00 0.00 40.09 3.77
5037 10369 1.197721 GTCCTTGCTTCATCCGTGTTG 59.802 52.381 0.00 0.00 0.00 3.33
5038 10370 1.072331 AGTCCTTGCTTCATCCGTGTT 59.928 47.619 0.00 0.00 0.00 3.32
5039 10371 0.687354 AGTCCTTGCTTCATCCGTGT 59.313 50.000 0.00 0.00 0.00 4.49
5040 10372 1.813513 AAGTCCTTGCTTCATCCGTG 58.186 50.000 0.00 0.00 0.00 4.94
5041 10373 2.154462 CAAAGTCCTTGCTTCATCCGT 58.846 47.619 0.00 0.00 0.00 4.69
5042 10374 1.470098 CCAAAGTCCTTGCTTCATCCG 59.530 52.381 0.00 0.00 33.27 4.18
5043 10375 2.229784 CACCAAAGTCCTTGCTTCATCC 59.770 50.000 0.00 0.00 33.27 3.51
5044 10376 2.887152 ACACCAAAGTCCTTGCTTCATC 59.113 45.455 0.00 0.00 33.27 2.92
5045 10377 2.887152 GACACCAAAGTCCTTGCTTCAT 59.113 45.455 0.00 0.00 33.27 2.57
5046 10378 2.092429 AGACACCAAAGTCCTTGCTTCA 60.092 45.455 0.00 0.00 39.34 3.02
5047 10379 2.550180 GAGACACCAAAGTCCTTGCTTC 59.450 50.000 0.00 0.00 39.34 3.86
5048 10380 2.576615 GAGACACCAAAGTCCTTGCTT 58.423 47.619 0.00 0.00 39.34 3.91
5049 10381 1.202818 GGAGACACCAAAGTCCTTGCT 60.203 52.381 0.00 0.00 39.34 3.91
5050 10382 1.202818 AGGAGACACCAAAGTCCTTGC 60.203 52.381 0.00 0.00 35.84 4.01
5051 10383 2.938956 AGGAGACACCAAAGTCCTTG 57.061 50.000 0.00 0.00 35.84 3.61
5053 10385 1.700186 GGAAGGAGACACCAAAGTCCT 59.300 52.381 0.00 0.00 41.42 3.85
5054 10386 1.700186 AGGAAGGAGACACCAAAGTCC 59.300 52.381 0.00 0.00 42.04 3.85
5055 10387 2.635427 AGAGGAAGGAGACACCAAAGTC 59.365 50.000 0.00 0.00 42.04 3.01
5056 10388 2.370189 CAGAGGAAGGAGACACCAAAGT 59.630 50.000 0.00 0.00 42.04 2.66
5057 10389 2.289945 CCAGAGGAAGGAGACACCAAAG 60.290 54.545 0.00 0.00 42.04 2.77
5058 10390 1.699634 CCAGAGGAAGGAGACACCAAA 59.300 52.381 0.00 0.00 42.04 3.28
5059 10391 1.352083 CCAGAGGAAGGAGACACCAA 58.648 55.000 0.00 0.00 42.04 3.67
5060 10392 1.194781 GCCAGAGGAAGGAGACACCA 61.195 60.000 0.00 0.00 42.04 4.17
5061 10393 0.907230 AGCCAGAGGAAGGAGACACC 60.907 60.000 0.00 0.00 39.35 4.16
5062 10394 1.478916 GTAGCCAGAGGAAGGAGACAC 59.521 57.143 0.00 0.00 0.00 3.67
5063 10395 1.077169 TGTAGCCAGAGGAAGGAGACA 59.923 52.381 0.00 0.00 0.00 3.41
5064 10396 1.853963 TGTAGCCAGAGGAAGGAGAC 58.146 55.000 0.00 0.00 0.00 3.36
5065 10397 2.461695 CTTGTAGCCAGAGGAAGGAGA 58.538 52.381 0.00 0.00 0.00 3.71
5066 10398 1.134551 GCTTGTAGCCAGAGGAAGGAG 60.135 57.143 0.00 0.00 34.48 3.69
5067 10399 0.905357 GCTTGTAGCCAGAGGAAGGA 59.095 55.000 0.00 0.00 34.48 3.36
5068 10400 3.467776 GCTTGTAGCCAGAGGAAGG 57.532 57.895 0.00 0.00 34.48 3.46
5078 10410 0.458716 GACTGACGAGGGCTTGTAGC 60.459 60.000 0.00 0.00 41.46 3.58
5079 10411 0.173708 GGACTGACGAGGGCTTGTAG 59.826 60.000 0.00 0.00 0.00 2.74
5080 10412 0.251653 AGGACTGACGAGGGCTTGTA 60.252 55.000 0.00 0.00 0.00 2.41
5081 10413 1.534235 AGGACTGACGAGGGCTTGT 60.534 57.895 0.00 0.00 0.00 3.16
5082 10414 1.216710 GAGGACTGACGAGGGCTTG 59.783 63.158 0.00 0.00 0.00 4.01
5083 10415 0.543174 AAGAGGACTGACGAGGGCTT 60.543 55.000 0.00 0.00 0.00 4.35
5084 10416 0.968393 GAAGAGGACTGACGAGGGCT 60.968 60.000 0.00 0.00 0.00 5.19
5085 10417 1.513622 GAAGAGGACTGACGAGGGC 59.486 63.158 0.00 0.00 0.00 5.19
5086 10418 0.677098 TCGAAGAGGACTGACGAGGG 60.677 60.000 0.00 0.00 34.15 4.30
5087 10419 1.131504 CTTCGAAGAGGACTGACGAGG 59.868 57.143 20.74 0.00 38.43 4.63
5088 10420 1.131504 CCTTCGAAGAGGACTGACGAG 59.868 57.143 26.61 0.99 38.43 4.18
5089 10421 1.166129 CCTTCGAAGAGGACTGACGA 58.834 55.000 26.61 0.00 38.43 4.20
5090 10422 0.882474 ACCTTCGAAGAGGACTGACG 59.118 55.000 26.61 8.60 38.43 4.35
5091 10423 1.614413 ACACCTTCGAAGAGGACTGAC 59.386 52.381 26.61 0.00 38.43 3.51
5092 10424 1.996798 ACACCTTCGAAGAGGACTGA 58.003 50.000 26.61 0.00 38.43 3.41
5093 10425 2.802816 CAAACACCTTCGAAGAGGACTG 59.197 50.000 26.61 13.24 38.43 3.51
5094 10426 2.698797 TCAAACACCTTCGAAGAGGACT 59.301 45.455 26.61 5.06 38.43 3.85
5095 10427 3.107642 TCAAACACCTTCGAAGAGGAC 57.892 47.619 26.61 0.00 38.43 3.85
5096 10428 3.386726 TCTTCAAACACCTTCGAAGAGGA 59.613 43.478 26.61 7.81 39.07 3.71
5097 10429 3.728845 TCTTCAAACACCTTCGAAGAGG 58.271 45.455 26.61 18.68 39.07 3.69
5098 10430 4.991056 TGATCTTCAAACACCTTCGAAGAG 59.009 41.667 26.61 19.31 45.05 2.85
5099 10431 4.956085 TGATCTTCAAACACCTTCGAAGA 58.044 39.130 26.61 2.42 45.69 2.87
5100 10432 5.625251 CATGATCTTCAAACACCTTCGAAG 58.375 41.667 18.51 18.51 36.93 3.79
5101 10433 4.083324 GCATGATCTTCAAACACCTTCGAA 60.083 41.667 0.00 0.00 0.00 3.71
5102 10434 3.436704 GCATGATCTTCAAACACCTTCGA 59.563 43.478 0.00 0.00 0.00 3.71
5103 10435 3.438087 AGCATGATCTTCAAACACCTTCG 59.562 43.478 0.00 0.00 0.00 3.79
5104 10436 5.382618 AAGCATGATCTTCAAACACCTTC 57.617 39.130 0.00 0.00 0.00 3.46
5105 10437 5.510179 CCAAAGCATGATCTTCAAACACCTT 60.510 40.000 0.00 0.00 0.00 3.50
5106 10438 4.021719 CCAAAGCATGATCTTCAAACACCT 60.022 41.667 0.00 0.00 0.00 4.00
5107 10439 4.022068 TCCAAAGCATGATCTTCAAACACC 60.022 41.667 0.00 0.00 0.00 4.16
5108 10440 5.125100 TCCAAAGCATGATCTTCAAACAC 57.875 39.130 0.00 0.00 0.00 3.32
5109 10441 5.279106 CCTTCCAAAGCATGATCTTCAAACA 60.279 40.000 0.00 0.00 0.00 2.83
5110 10442 5.166398 CCTTCCAAAGCATGATCTTCAAAC 58.834 41.667 0.00 0.00 0.00 2.93
5111 10443 4.221262 CCCTTCCAAAGCATGATCTTCAAA 59.779 41.667 0.00 0.00 0.00 2.69
5112 10444 3.765511 CCCTTCCAAAGCATGATCTTCAA 59.234 43.478 0.00 0.00 0.00 2.69
5113 10445 3.245371 ACCCTTCCAAAGCATGATCTTCA 60.245 43.478 0.00 0.00 0.00 3.02
5114 10446 3.359950 ACCCTTCCAAAGCATGATCTTC 58.640 45.455 0.00 0.00 0.00 2.87
5115 10447 3.245371 TGACCCTTCCAAAGCATGATCTT 60.245 43.478 0.00 0.00 0.00 2.40
5116 10448 2.309755 TGACCCTTCCAAAGCATGATCT 59.690 45.455 0.00 0.00 0.00 2.75
5117 10449 2.726821 TGACCCTTCCAAAGCATGATC 58.273 47.619 0.00 0.00 0.00 2.92
5118 10450 2.905415 TGACCCTTCCAAAGCATGAT 57.095 45.000 0.00 0.00 0.00 2.45
5119 10451 2.041485 TGATGACCCTTCCAAAGCATGA 59.959 45.455 0.00 0.00 0.00 3.07
5120 10452 2.449464 TGATGACCCTTCCAAAGCATG 58.551 47.619 0.00 0.00 0.00 4.06
5121 10453 2.905415 TGATGACCCTTCCAAAGCAT 57.095 45.000 0.00 0.00 0.00 3.79
5122 10454 2.905415 ATGATGACCCTTCCAAAGCA 57.095 45.000 0.00 0.00 0.00 3.91
5123 10455 3.891049 ACTATGATGACCCTTCCAAAGC 58.109 45.455 0.00 0.00 0.00 3.51
5124 10456 7.938140 TTAAACTATGATGACCCTTCCAAAG 57.062 36.000 0.00 0.00 0.00 2.77
5125 10457 8.713708 TTTTAAACTATGATGACCCTTCCAAA 57.286 30.769 0.00 0.00 0.00 3.28
5126 10458 8.893563 ATTTTAAACTATGATGACCCTTCCAA 57.106 30.769 0.00 0.00 0.00 3.53
5127 10459 8.893563 AATTTTAAACTATGATGACCCTTCCA 57.106 30.769 0.00 0.00 0.00 3.53
5128 10460 8.414003 GGAATTTTAAACTATGATGACCCTTCC 58.586 37.037 0.00 0.00 0.00 3.46
5129 10461 8.966868 TGGAATTTTAAACTATGATGACCCTTC 58.033 33.333 0.00 0.00 0.00 3.46
5130 10462 8.893563 TGGAATTTTAAACTATGATGACCCTT 57.106 30.769 0.00 0.00 0.00 3.95
5131 10463 9.136323 GATGGAATTTTAAACTATGATGACCCT 57.864 33.333 0.00 0.00 0.00 4.34
5132 10464 8.912988 TGATGGAATTTTAAACTATGATGACCC 58.087 33.333 0.00 0.00 0.00 4.46
5142 10474 8.998377 CGGGAAATTTTGATGGAATTTTAAACT 58.002 29.630 0.00 0.00 36.96 2.66
5143 10475 8.994170 TCGGGAAATTTTGATGGAATTTTAAAC 58.006 29.630 0.00 0.00 36.96 2.01
5144 10476 9.561069 TTCGGGAAATTTTGATGGAATTTTAAA 57.439 25.926 0.00 0.00 36.96 1.52
5145 10477 9.213799 CTTCGGGAAATTTTGATGGAATTTTAA 57.786 29.630 0.00 0.00 36.96 1.52
5146 10478 8.371699 ACTTCGGGAAATTTTGATGGAATTTTA 58.628 29.630 0.00 0.00 36.96 1.52
5147 10479 7.223584 ACTTCGGGAAATTTTGATGGAATTTT 58.776 30.769 0.00 0.00 36.96 1.82
5148 10480 6.768483 ACTTCGGGAAATTTTGATGGAATTT 58.232 32.000 0.00 0.00 38.89 1.82
5149 10481 6.358974 ACTTCGGGAAATTTTGATGGAATT 57.641 33.333 0.00 0.00 0.00 2.17
5150 10482 6.358974 AACTTCGGGAAATTTTGATGGAAT 57.641 33.333 0.00 0.00 0.00 3.01
5151 10483 5.799827 AACTTCGGGAAATTTTGATGGAA 57.200 34.783 0.00 0.00 0.00 3.53
5152 10484 5.303078 TGAAACTTCGGGAAATTTTGATGGA 59.697 36.000 0.00 0.00 0.00 3.41
5153 10485 5.537188 TGAAACTTCGGGAAATTTTGATGG 58.463 37.500 0.00 0.00 0.00 3.51
5154 10486 6.478344 TGTTGAAACTTCGGGAAATTTTGATG 59.522 34.615 0.00 0.00 0.00 3.07
5155 10487 6.578023 TGTTGAAACTTCGGGAAATTTTGAT 58.422 32.000 0.00 0.00 0.00 2.57
5156 10488 5.967088 TGTTGAAACTTCGGGAAATTTTGA 58.033 33.333 0.00 0.00 0.00 2.69
5157 10489 6.654793 TTGTTGAAACTTCGGGAAATTTTG 57.345 33.333 0.00 0.00 0.00 2.44
5158 10490 7.857734 AATTGTTGAAACTTCGGGAAATTTT 57.142 28.000 0.00 0.00 0.00 1.82
5159 10491 7.768582 AGAAATTGTTGAAACTTCGGGAAATTT 59.231 29.630 0.00 0.00 0.00 1.82
5160 10492 7.272244 AGAAATTGTTGAAACTTCGGGAAATT 58.728 30.769 0.00 0.00 0.00 1.82
5161 10493 6.816136 AGAAATTGTTGAAACTTCGGGAAAT 58.184 32.000 0.00 0.00 0.00 2.17
5162 10494 6.215495 AGAAATTGTTGAAACTTCGGGAAA 57.785 33.333 0.00 0.00 0.00 3.13
5163 10495 5.845391 AGAAATTGTTGAAACTTCGGGAA 57.155 34.783 0.00 0.00 0.00 3.97
5426 10758 9.880157 CTGGAAACCATTTTGATTTAATCAGAT 57.120 29.630 7.72 4.31 34.97 2.90
5427 10759 8.869109 ACTGGAAACCATTTTGATTTAATCAGA 58.131 29.630 7.72 0.78 34.97 3.27
5430 10762 9.087424 GCTACTGGAAACCATTTTGATTTAATC 57.913 33.333 0.00 0.00 30.82 1.75
5431 10763 7.759433 CGCTACTGGAAACCATTTTGATTTAAT 59.241 33.333 0.00 0.00 30.82 1.40
5432 10764 7.087639 CGCTACTGGAAACCATTTTGATTTAA 58.912 34.615 0.00 0.00 30.82 1.52
5433 10765 6.616947 CGCTACTGGAAACCATTTTGATTTA 58.383 36.000 0.00 0.00 30.82 1.40
5434 10766 5.469479 CGCTACTGGAAACCATTTTGATTT 58.531 37.500 0.00 0.00 30.82 2.17
5435 10767 4.618227 GCGCTACTGGAAACCATTTTGATT 60.618 41.667 0.00 0.00 30.82 2.57
5436 10768 3.119495 GCGCTACTGGAAACCATTTTGAT 60.119 43.478 0.00 0.00 30.82 2.57
5437 10769 2.227865 GCGCTACTGGAAACCATTTTGA 59.772 45.455 0.00 0.00 30.82 2.69
5438 10770 2.030363 TGCGCTACTGGAAACCATTTTG 60.030 45.455 9.73 0.00 30.82 2.44
5439 10771 2.228822 CTGCGCTACTGGAAACCATTTT 59.771 45.455 9.73 0.00 30.82 1.82
5440 10772 1.812571 CTGCGCTACTGGAAACCATTT 59.187 47.619 9.73 0.00 30.82 2.32
5441 10773 1.271379 ACTGCGCTACTGGAAACCATT 60.271 47.619 9.73 0.00 30.82 3.16
5442 10774 0.324943 ACTGCGCTACTGGAAACCAT 59.675 50.000 9.73 0.00 30.82 3.55
5443 10775 0.602638 CACTGCGCTACTGGAAACCA 60.603 55.000 9.73 0.00 0.00 3.67
5444 10776 1.298859 CCACTGCGCTACTGGAAACC 61.299 60.000 9.73 0.00 0.00 3.27
5445 10777 0.602905 ACCACTGCGCTACTGGAAAC 60.603 55.000 20.89 0.00 0.00 2.78
5446 10778 0.107831 AACCACTGCGCTACTGGAAA 59.892 50.000 20.89 0.00 0.00 3.13
5447 10779 0.320421 GAACCACTGCGCTACTGGAA 60.320 55.000 20.89 0.00 0.00 3.53
5448 10780 1.292223 GAACCACTGCGCTACTGGA 59.708 57.895 20.89 0.00 0.00 3.86
5449 10781 2.094659 CGAACCACTGCGCTACTGG 61.095 63.158 9.73 12.84 0.00 4.00
5450 10782 3.463505 CGAACCACTGCGCTACTG 58.536 61.111 9.73 0.23 0.00 2.74
5456 10788 2.128853 ATTTGGTGCGAACCACTGCG 62.129 55.000 17.19 0.00 44.08 5.18
5457 10789 0.878416 TATTTGGTGCGAACCACTGC 59.122 50.000 17.19 0.00 44.08 4.40
5458 10790 6.801539 ATATATATTTGGTGCGAACCACTG 57.198 37.500 17.19 0.00 44.08 3.66
5459 10791 7.817418 AAATATATATTTGGTGCGAACCACT 57.183 32.000 17.19 8.55 44.08 4.00
5460 10792 8.751335 CAAAAATATATATTTGGTGCGAACCAC 58.249 33.333 17.19 0.00 39.90 4.16
5461 10793 7.923344 CCAAAAATATATATTTGGTGCGAACCA 59.077 33.333 12.64 12.64 46.73 3.67
5462 10794 8.293114 CCAAAAATATATATTTGGTGCGAACC 57.707 34.615 19.08 5.27 46.73 3.62
5487 10819 4.708177 TCTCAGCTAGGACATAATTTGGC 58.292 43.478 0.00 0.00 0.00 4.52
5488 10820 7.500227 TCAAATCTCAGCTAGGACATAATTTGG 59.500 37.037 0.00 0.00 34.17 3.28
5489 10821 8.442632 TCAAATCTCAGCTAGGACATAATTTG 57.557 34.615 0.00 0.00 34.50 2.32
5490 10822 8.897752 GTTCAAATCTCAGCTAGGACATAATTT 58.102 33.333 0.00 0.00 0.00 1.82
5491 10823 8.270744 AGTTCAAATCTCAGCTAGGACATAATT 58.729 33.333 0.00 0.00 0.00 1.40
5492 10824 7.714377 CAGTTCAAATCTCAGCTAGGACATAAT 59.286 37.037 0.00 0.00 0.00 1.28
5493 10825 7.044181 CAGTTCAAATCTCAGCTAGGACATAA 58.956 38.462 0.00 0.00 0.00 1.90
5494 10826 6.577103 CAGTTCAAATCTCAGCTAGGACATA 58.423 40.000 0.00 0.00 0.00 2.29
5495 10827 5.426504 CAGTTCAAATCTCAGCTAGGACAT 58.573 41.667 0.00 0.00 0.00 3.06
5496 10828 4.825422 CAGTTCAAATCTCAGCTAGGACA 58.175 43.478 0.00 0.00 0.00 4.02
5497 10829 3.620821 GCAGTTCAAATCTCAGCTAGGAC 59.379 47.826 0.00 0.00 0.00 3.85
5498 10830 3.677148 CGCAGTTCAAATCTCAGCTAGGA 60.677 47.826 0.00 0.00 0.00 2.94
5499 10831 2.606725 CGCAGTTCAAATCTCAGCTAGG 59.393 50.000 0.00 0.00 0.00 3.02
5500 10832 2.606725 CCGCAGTTCAAATCTCAGCTAG 59.393 50.000 0.00 0.00 0.00 3.42
5501 10833 2.621338 CCGCAGTTCAAATCTCAGCTA 58.379 47.619 0.00 0.00 0.00 3.32
5502 10834 1.446907 CCGCAGTTCAAATCTCAGCT 58.553 50.000 0.00 0.00 0.00 4.24
5503 10835 0.179179 GCCGCAGTTCAAATCTCAGC 60.179 55.000 0.00 0.00 0.00 4.26
5504 10836 0.449388 GGCCGCAGTTCAAATCTCAG 59.551 55.000 0.00 0.00 0.00 3.35
5505 10837 0.250684 TGGCCGCAGTTCAAATCTCA 60.251 50.000 0.00 0.00 0.00 3.27
5506 10838 0.449388 CTGGCCGCAGTTCAAATCTC 59.551 55.000 0.00 0.00 0.00 2.75
5507 10839 2.559785 CTGGCCGCAGTTCAAATCT 58.440 52.632 0.00 0.00 0.00 2.40


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.