Multiple sequence alignment - TraesCS5B01G351800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G351800 chr5B 100.000 3347 0 0 1 3347 531698328 531694982 0.000000e+00 6181
1 TraesCS5B01G351800 chr5B 76.768 1089 186 40 1527 2584 631548696 631549748 6.310000e-152 547
2 TraesCS5B01G351800 chr5B 98.667 225 3 0 3123 3347 531683417 531683193 1.870000e-107 399
3 TraesCS5B01G351800 chr5D 90.388 1779 116 18 1270 3028 437761227 437762970 0.000000e+00 2287
4 TraesCS5B01G351800 chr5D 76.026 1097 183 47 1526 2584 502731915 502732969 2.320000e-136 496
5 TraesCS5B01G351800 chr5D 96.023 176 7 0 3169 3344 437762970 437763145 1.520000e-73 287
6 TraesCS5B01G351800 chr5D 79.062 320 60 6 2015 2329 432041918 432041601 2.620000e-51 213
7 TraesCS5B01G351800 chr6D 92.807 862 58 4 1 860 432846815 432847674 0.000000e+00 1245
8 TraesCS5B01G351800 chr6D 92.199 141 10 1 3031 3170 44255012 44254872 7.320000e-47 198
9 TraesCS5B01G351800 chr4A 92.567 861 60 4 1 860 724774118 724773261 0.000000e+00 1232
10 TraesCS5B01G351800 chr4A 91.986 861 66 3 1 860 724504885 724505743 0.000000e+00 1205
11 TraesCS5B01G351800 chr7D 92.254 865 63 4 1 862 46985145 46986008 0.000000e+00 1223
12 TraesCS5B01G351800 chr2B 92.236 863 62 5 1 860 713942188 713943048 0.000000e+00 1218
13 TraesCS5B01G351800 chr2D 92.236 863 58 6 1 861 12750252 12749397 0.000000e+00 1214
14 TraesCS5B01G351800 chr2D 75.880 1165 198 56 1406 2541 569680003 569678893 4.950000e-143 518
15 TraesCS5B01G351800 chr2D 91.724 145 11 1 3031 3174 482800725 482800581 2.040000e-47 200
16 TraesCS5B01G351800 chr1D 92.121 863 64 4 1 860 62159859 62158998 0.000000e+00 1214
17 TraesCS5B01G351800 chr1A 92.102 861 64 4 3 861 425687096 425686238 0.000000e+00 1210
18 TraesCS5B01G351800 chr6A 92.005 863 65 4 1 860 605144502 605145363 0.000000e+00 1208
19 TraesCS5B01G351800 chr7A 83.696 552 67 9 2012 2541 634326547 634327097 1.790000e-137 499
20 TraesCS5B01G351800 chrUn 95.035 141 6 1 3031 3170 131950953 131951093 1.560000e-53 220
21 TraesCS5B01G351800 chr3D 95.035 141 6 1 3031 3170 528184792 528184932 1.560000e-53 220
22 TraesCS5B01G351800 chr6B 92.754 138 9 1 3031 3167 592484864 592485001 7.320000e-47 198
23 TraesCS5B01G351800 chr1B 91.156 147 10 3 3031 3174 168624585 168624731 2.630000e-46 196
24 TraesCS5B01G351800 chr3A 88.811 143 16 0 3031 3173 640362083 640362225 3.430000e-40 176
25 TraesCS5B01G351800 chr2A 83.815 173 24 3 2364 2533 709056596 709056425 9.610000e-36 161


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G351800 chr5B 531694982 531698328 3346 True 6181 6181 100.0000 1 3347 1 chr5B.!!$R2 3346
1 TraesCS5B01G351800 chr5B 631548696 631549748 1052 False 547 547 76.7680 1527 2584 1 chr5B.!!$F1 1057
2 TraesCS5B01G351800 chr5D 437761227 437763145 1918 False 1287 2287 93.2055 1270 3344 2 chr5D.!!$F2 2074
3 TraesCS5B01G351800 chr5D 502731915 502732969 1054 False 496 496 76.0260 1526 2584 1 chr5D.!!$F1 1058
4 TraesCS5B01G351800 chr6D 432846815 432847674 859 False 1245 1245 92.8070 1 860 1 chr6D.!!$F1 859
5 TraesCS5B01G351800 chr4A 724773261 724774118 857 True 1232 1232 92.5670 1 860 1 chr4A.!!$R1 859
6 TraesCS5B01G351800 chr4A 724504885 724505743 858 False 1205 1205 91.9860 1 860 1 chr4A.!!$F1 859
7 TraesCS5B01G351800 chr7D 46985145 46986008 863 False 1223 1223 92.2540 1 862 1 chr7D.!!$F1 861
8 TraesCS5B01G351800 chr2B 713942188 713943048 860 False 1218 1218 92.2360 1 860 1 chr2B.!!$F1 859
9 TraesCS5B01G351800 chr2D 12749397 12750252 855 True 1214 1214 92.2360 1 861 1 chr2D.!!$R1 860
10 TraesCS5B01G351800 chr2D 569678893 569680003 1110 True 518 518 75.8800 1406 2541 1 chr2D.!!$R3 1135
11 TraesCS5B01G351800 chr1D 62158998 62159859 861 True 1214 1214 92.1210 1 860 1 chr1D.!!$R1 859
12 TraesCS5B01G351800 chr1A 425686238 425687096 858 True 1210 1210 92.1020 3 861 1 chr1A.!!$R1 858
13 TraesCS5B01G351800 chr6A 605144502 605145363 861 False 1208 1208 92.0050 1 860 1 chr6A.!!$F1 859
14 TraesCS5B01G351800 chr7A 634326547 634327097 550 False 499 499 83.6960 2012 2541 1 chr7A.!!$F1 529

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
938 943 0.035915 GTCTCCCTGCAACCCTCTTC 60.036 60.0 0.0 0.0 0.0 2.87 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2827 2888 0.512952 CGGTTGGTTTGCTTCTCTCG 59.487 55.0 0.0 0.0 0.0 4.04 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
86 87 2.893404 GGTGCACACGTTGTCGGT 60.893 61.111 20.43 0.00 41.85 4.69
176 177 3.836146 TGCCCCTATCATCATTTCCTTG 58.164 45.455 0.00 0.00 0.00 3.61
223 224 1.417890 CCAACTCCACTCAACACCTCT 59.582 52.381 0.00 0.00 0.00 3.69
226 227 1.342074 CTCCACTCAACACCTCTGGA 58.658 55.000 0.00 0.00 0.00 3.86
373 375 5.368145 GGTGCTTCATCCTACACATTCATA 58.632 41.667 0.00 0.00 34.69 2.15
601 606 3.391382 GCCGGACTGGTAGGTGCT 61.391 66.667 5.05 0.00 41.21 4.40
607 612 2.330216 GGACTGGTAGGTGCTCCATAT 58.670 52.381 7.70 0.00 35.89 1.78
636 641 1.238938 TCCTGGTTGGGACCTCAGT 59.761 57.895 0.00 0.00 46.66 3.41
645 650 4.019231 GGTTGGGACCTCAGTTCTTAGATT 60.019 45.833 0.00 0.00 42.99 2.40
711 716 2.041485 TCAGCACCCCTTCATCAATTGA 59.959 45.455 11.26 11.26 0.00 2.57
716 721 4.889409 GCACCCCTTCATCAATTGAATAGA 59.111 41.667 13.09 8.26 43.30 1.98
733 738 6.296026 TGAATAGAAGTAGCCACAGTTGTTT 58.704 36.000 0.00 0.00 0.00 2.83
740 745 6.115448 AGTAGCCACAGTTGTTTCTTAGAT 57.885 37.500 0.00 0.00 0.00 1.98
786 791 7.276658 TGTATGACTTTGTAAGGTCTTGTGAA 58.723 34.615 8.11 0.00 34.01 3.18
887 892 2.598589 CACCAATTGGAAGCGAATGTG 58.401 47.619 31.22 11.28 38.94 3.21
888 893 1.067635 ACCAATTGGAAGCGAATGTGC 60.068 47.619 31.22 0.00 38.94 4.57
889 894 3.402355 ACCAATTGGAAGCGAATGTGCT 61.402 45.455 31.22 0.05 42.60 4.40
890 895 2.523015 CAATTGGAAGCGAATGTGCTC 58.477 47.619 0.00 0.00 46.60 4.26
891 896 2.119801 ATTGGAAGCGAATGTGCTCT 57.880 45.000 0.00 0.00 46.60 4.09
892 897 2.760634 TTGGAAGCGAATGTGCTCTA 57.239 45.000 0.00 0.00 46.60 2.43
893 898 2.988010 TGGAAGCGAATGTGCTCTAT 57.012 45.000 0.00 0.00 46.60 1.98
894 899 3.266510 TGGAAGCGAATGTGCTCTATT 57.733 42.857 0.00 0.00 46.60 1.73
895 900 3.609853 TGGAAGCGAATGTGCTCTATTT 58.390 40.909 0.00 0.00 46.60 1.40
896 901 3.374988 TGGAAGCGAATGTGCTCTATTTG 59.625 43.478 0.00 0.00 46.60 2.32
897 902 3.623060 GGAAGCGAATGTGCTCTATTTGA 59.377 43.478 0.00 0.00 46.60 2.69
898 903 4.274459 GGAAGCGAATGTGCTCTATTTGAT 59.726 41.667 0.00 0.00 46.60 2.57
899 904 4.808077 AGCGAATGTGCTCTATTTGATG 57.192 40.909 0.00 0.00 42.95 3.07
900 905 3.562973 AGCGAATGTGCTCTATTTGATGG 59.437 43.478 0.00 0.00 42.95 3.51
901 906 3.851105 GCGAATGTGCTCTATTTGATGGC 60.851 47.826 0.00 0.00 0.00 4.40
902 907 3.304257 CGAATGTGCTCTATTTGATGGCC 60.304 47.826 0.00 0.00 0.00 5.36
903 908 2.804986 TGTGCTCTATTTGATGGCCA 57.195 45.000 8.56 8.56 0.00 5.36
904 909 2.646930 TGTGCTCTATTTGATGGCCAG 58.353 47.619 13.05 0.00 0.00 4.85
905 910 2.239402 TGTGCTCTATTTGATGGCCAGA 59.761 45.455 13.05 0.00 0.00 3.86
906 911 3.282021 GTGCTCTATTTGATGGCCAGAA 58.718 45.455 13.05 6.51 0.00 3.02
907 912 3.314635 GTGCTCTATTTGATGGCCAGAAG 59.685 47.826 13.05 1.96 0.00 2.85
908 913 3.200605 TGCTCTATTTGATGGCCAGAAGA 59.799 43.478 13.05 6.45 0.00 2.87
909 914 3.814283 GCTCTATTTGATGGCCAGAAGAG 59.186 47.826 13.05 16.18 33.49 2.85
910 915 3.813443 TCTATTTGATGGCCAGAAGAGC 58.187 45.455 13.05 0.00 0.00 4.09
924 929 2.804856 GAGCCAGCTCTCGTCTCC 59.195 66.667 12.42 0.00 39.80 3.71
925 930 2.757917 AGCCAGCTCTCGTCTCCC 60.758 66.667 0.00 0.00 0.00 4.30
926 931 2.757917 GCCAGCTCTCGTCTCCCT 60.758 66.667 0.00 0.00 0.00 4.20
927 932 3.074999 GCCAGCTCTCGTCTCCCTG 62.075 68.421 0.00 0.00 0.00 4.45
928 933 2.493973 CAGCTCTCGTCTCCCTGC 59.506 66.667 0.00 0.00 0.00 4.85
929 934 2.036414 AGCTCTCGTCTCCCTGCA 59.964 61.111 0.00 0.00 0.00 4.41
930 935 1.607756 AGCTCTCGTCTCCCTGCAA 60.608 57.895 0.00 0.00 0.00 4.08
931 936 1.446966 GCTCTCGTCTCCCTGCAAC 60.447 63.158 0.00 0.00 0.00 4.17
932 937 1.216710 CTCTCGTCTCCCTGCAACC 59.783 63.158 0.00 0.00 0.00 3.77
933 938 2.232298 CTCTCGTCTCCCTGCAACCC 62.232 65.000 0.00 0.00 0.00 4.11
934 939 2.203788 TCGTCTCCCTGCAACCCT 60.204 61.111 0.00 0.00 0.00 4.34
935 940 2.232298 CTCGTCTCCCTGCAACCCTC 62.232 65.000 0.00 0.00 0.00 4.30
936 941 2.286523 CGTCTCCCTGCAACCCTCT 61.287 63.158 0.00 0.00 0.00 3.69
937 942 1.831652 CGTCTCCCTGCAACCCTCTT 61.832 60.000 0.00 0.00 0.00 2.85
938 943 0.035915 GTCTCCCTGCAACCCTCTTC 60.036 60.000 0.00 0.00 0.00 2.87
939 944 0.178891 TCTCCCTGCAACCCTCTTCT 60.179 55.000 0.00 0.00 0.00 2.85
940 945 0.695347 CTCCCTGCAACCCTCTTCTT 59.305 55.000 0.00 0.00 0.00 2.52
941 946 0.401738 TCCCTGCAACCCTCTTCTTG 59.598 55.000 0.00 0.00 0.00 3.02
942 947 1.246737 CCCTGCAACCCTCTTCTTGC 61.247 60.000 0.00 0.00 42.67 4.01
943 948 1.246737 CCTGCAACCCTCTTCTTGCC 61.247 60.000 0.00 0.00 41.83 4.52
944 949 1.228552 TGCAACCCTCTTCTTGCCC 60.229 57.895 0.00 0.00 41.83 5.36
945 950 1.075659 GCAACCCTCTTCTTGCCCT 59.924 57.895 0.00 0.00 37.41 5.19
946 951 0.540597 GCAACCCTCTTCTTGCCCTT 60.541 55.000 0.00 0.00 37.41 3.95
947 952 2.001076 CAACCCTCTTCTTGCCCTTT 57.999 50.000 0.00 0.00 0.00 3.11
948 953 2.319844 CAACCCTCTTCTTGCCCTTTT 58.680 47.619 0.00 0.00 0.00 2.27
949 954 2.700371 CAACCCTCTTCTTGCCCTTTTT 59.300 45.455 0.00 0.00 0.00 1.94
950 955 2.598565 ACCCTCTTCTTGCCCTTTTTC 58.401 47.619 0.00 0.00 0.00 2.29
951 956 2.177888 ACCCTCTTCTTGCCCTTTTTCT 59.822 45.455 0.00 0.00 0.00 2.52
952 957 3.234353 CCCTCTTCTTGCCCTTTTTCTT 58.766 45.455 0.00 0.00 0.00 2.52
953 958 3.256879 CCCTCTTCTTGCCCTTTTTCTTC 59.743 47.826 0.00 0.00 0.00 2.87
954 959 4.148079 CCTCTTCTTGCCCTTTTTCTTCT 58.852 43.478 0.00 0.00 0.00 2.85
955 960 4.586421 CCTCTTCTTGCCCTTTTTCTTCTT 59.414 41.667 0.00 0.00 0.00 2.52
956 961 5.278709 CCTCTTCTTGCCCTTTTTCTTCTTC 60.279 44.000 0.00 0.00 0.00 2.87
957 962 5.200483 TCTTCTTGCCCTTTTTCTTCTTCA 58.800 37.500 0.00 0.00 0.00 3.02
958 963 5.835280 TCTTCTTGCCCTTTTTCTTCTTCAT 59.165 36.000 0.00 0.00 0.00 2.57
959 964 5.712152 TCTTGCCCTTTTTCTTCTTCATC 57.288 39.130 0.00 0.00 0.00 2.92
960 965 5.139727 TCTTGCCCTTTTTCTTCTTCATCA 58.860 37.500 0.00 0.00 0.00 3.07
961 966 5.776716 TCTTGCCCTTTTTCTTCTTCATCAT 59.223 36.000 0.00 0.00 0.00 2.45
962 967 5.649782 TGCCCTTTTTCTTCTTCATCATC 57.350 39.130 0.00 0.00 0.00 2.92
963 968 5.078949 TGCCCTTTTTCTTCTTCATCATCA 58.921 37.500 0.00 0.00 0.00 3.07
964 969 5.047802 TGCCCTTTTTCTTCTTCATCATCAC 60.048 40.000 0.00 0.00 0.00 3.06
965 970 5.623141 GCCCTTTTTCTTCTTCATCATCACC 60.623 44.000 0.00 0.00 0.00 4.02
966 971 5.713861 CCCTTTTTCTTCTTCATCATCACCT 59.286 40.000 0.00 0.00 0.00 4.00
967 972 6.886459 CCCTTTTTCTTCTTCATCATCACCTA 59.114 38.462 0.00 0.00 0.00 3.08
968 973 7.148171 CCCTTTTTCTTCTTCATCATCACCTAC 60.148 40.741 0.00 0.00 0.00 3.18
969 974 7.609532 CCTTTTTCTTCTTCATCATCACCTACT 59.390 37.037 0.00 0.00 0.00 2.57
970 975 8.924511 TTTTTCTTCTTCATCATCACCTACTT 57.075 30.769 0.00 0.00 0.00 2.24
971 976 7.912056 TTTCTTCTTCATCATCACCTACTTG 57.088 36.000 0.00 0.00 0.00 3.16
972 977 6.857437 TCTTCTTCATCATCACCTACTTGA 57.143 37.500 0.00 0.00 0.00 3.02
973 978 7.429374 TCTTCTTCATCATCACCTACTTGAT 57.571 36.000 0.00 0.00 36.62 2.57
974 979 7.495901 TCTTCTTCATCATCACCTACTTGATC 58.504 38.462 0.00 0.00 33.74 2.92
975 980 7.344093 TCTTCTTCATCATCACCTACTTGATCT 59.656 37.037 0.00 0.00 33.74 2.75
976 981 7.429374 TCTTCATCATCACCTACTTGATCTT 57.571 36.000 0.00 0.00 33.74 2.40
977 982 7.855375 TCTTCATCATCACCTACTTGATCTTT 58.145 34.615 0.00 0.00 33.74 2.52
978 983 7.984050 TCTTCATCATCACCTACTTGATCTTTC 59.016 37.037 0.00 0.00 33.74 2.62
979 984 6.586344 TCATCATCACCTACTTGATCTTTCC 58.414 40.000 0.00 0.00 33.74 3.13
980 985 5.359194 TCATCACCTACTTGATCTTTCCC 57.641 43.478 0.00 0.00 33.74 3.97
981 986 4.782691 TCATCACCTACTTGATCTTTCCCA 59.217 41.667 0.00 0.00 33.74 4.37
982 987 5.429762 TCATCACCTACTTGATCTTTCCCAT 59.570 40.000 0.00 0.00 33.74 4.00
983 988 5.102953 TCACCTACTTGATCTTTCCCATG 57.897 43.478 0.00 0.00 0.00 3.66
984 989 4.536090 TCACCTACTTGATCTTTCCCATGT 59.464 41.667 0.00 0.00 0.00 3.21
985 990 4.878397 CACCTACTTGATCTTTCCCATGTC 59.122 45.833 0.00 0.00 0.00 3.06
986 991 4.536090 ACCTACTTGATCTTTCCCATGTCA 59.464 41.667 0.00 0.00 0.00 3.58
987 992 5.192522 ACCTACTTGATCTTTCCCATGTCAT 59.807 40.000 0.00 0.00 0.00 3.06
988 993 5.762218 CCTACTTGATCTTTCCCATGTCATC 59.238 44.000 0.00 0.00 0.00 2.92
989 994 4.530875 ACTTGATCTTTCCCATGTCATCC 58.469 43.478 0.00 0.00 0.00 3.51
990 995 4.018141 ACTTGATCTTTCCCATGTCATCCA 60.018 41.667 0.00 0.00 0.00 3.41
991 996 4.801521 TGATCTTTCCCATGTCATCCAT 57.198 40.909 0.00 0.00 0.00 3.41
992 997 4.722220 TGATCTTTCCCATGTCATCCATC 58.278 43.478 0.00 0.00 0.00 3.51
993 998 4.414514 TGATCTTTCCCATGTCATCCATCT 59.585 41.667 0.00 0.00 0.00 2.90
994 999 4.868172 TCTTTCCCATGTCATCCATCTT 57.132 40.909 0.00 0.00 0.00 2.40
995 1000 4.785301 TCTTTCCCATGTCATCCATCTTC 58.215 43.478 0.00 0.00 0.00 2.87
996 1001 4.227982 TCTTTCCCATGTCATCCATCTTCA 59.772 41.667 0.00 0.00 0.00 3.02
997 1002 4.589647 TTCCCATGTCATCCATCTTCAA 57.410 40.909 0.00 0.00 0.00 2.69
998 1003 3.889815 TCCCATGTCATCCATCTTCAAC 58.110 45.455 0.00 0.00 0.00 3.18
999 1004 2.954318 CCCATGTCATCCATCTTCAACC 59.046 50.000 0.00 0.00 0.00 3.77
1000 1005 3.623703 CCATGTCATCCATCTTCAACCA 58.376 45.455 0.00 0.00 0.00 3.67
1001 1006 4.212716 CCATGTCATCCATCTTCAACCAT 58.787 43.478 0.00 0.00 0.00 3.55
1002 1007 4.037565 CCATGTCATCCATCTTCAACCATG 59.962 45.833 0.00 0.00 0.00 3.66
1003 1008 4.305539 TGTCATCCATCTTCAACCATGT 57.694 40.909 0.00 0.00 0.00 3.21
1004 1009 4.264253 TGTCATCCATCTTCAACCATGTC 58.736 43.478 0.00 0.00 0.00 3.06
1005 1010 3.629398 GTCATCCATCTTCAACCATGTCC 59.371 47.826 0.00 0.00 0.00 4.02
1006 1011 3.266513 TCATCCATCTTCAACCATGTCCA 59.733 43.478 0.00 0.00 0.00 4.02
1007 1012 4.079615 TCATCCATCTTCAACCATGTCCAT 60.080 41.667 0.00 0.00 0.00 3.41
1008 1013 4.320546 TCCATCTTCAACCATGTCCATT 57.679 40.909 0.00 0.00 0.00 3.16
1009 1014 4.272489 TCCATCTTCAACCATGTCCATTC 58.728 43.478 0.00 0.00 0.00 2.67
1010 1015 3.382546 CCATCTTCAACCATGTCCATTCC 59.617 47.826 0.00 0.00 0.00 3.01
1011 1016 3.085952 TCTTCAACCATGTCCATTCCC 57.914 47.619 0.00 0.00 0.00 3.97
1012 1017 2.102578 CTTCAACCATGTCCATTCCCC 58.897 52.381 0.00 0.00 0.00 4.81
1013 1018 1.381867 TCAACCATGTCCATTCCCCT 58.618 50.000 0.00 0.00 0.00 4.79
1014 1019 1.005805 TCAACCATGTCCATTCCCCTG 59.994 52.381 0.00 0.00 0.00 4.45
1015 1020 0.324645 AACCATGTCCATTCCCCTGC 60.325 55.000 0.00 0.00 0.00 4.85
1016 1021 1.456331 CCATGTCCATTCCCCTGCC 60.456 63.158 0.00 0.00 0.00 4.85
1017 1022 1.456331 CATGTCCATTCCCCTGCCC 60.456 63.158 0.00 0.00 0.00 5.36
1018 1023 1.623686 ATGTCCATTCCCCTGCCCT 60.624 57.895 0.00 0.00 0.00 5.19
1019 1024 1.224003 ATGTCCATTCCCCTGCCCTT 61.224 55.000 0.00 0.00 0.00 3.95
1020 1025 1.380380 GTCCATTCCCCTGCCCTTG 60.380 63.158 0.00 0.00 0.00 3.61
1021 1026 1.856873 TCCATTCCCCTGCCCTTGT 60.857 57.895 0.00 0.00 0.00 3.16
1022 1027 0.551377 TCCATTCCCCTGCCCTTGTA 60.551 55.000 0.00 0.00 0.00 2.41
1023 1028 0.557729 CCATTCCCCTGCCCTTGTAT 59.442 55.000 0.00 0.00 0.00 2.29
1024 1029 1.479389 CCATTCCCCTGCCCTTGTATC 60.479 57.143 0.00 0.00 0.00 2.24
1025 1030 1.496429 CATTCCCCTGCCCTTGTATCT 59.504 52.381 0.00 0.00 0.00 1.98
1026 1031 1.213296 TTCCCCTGCCCTTGTATCTC 58.787 55.000 0.00 0.00 0.00 2.75
1027 1032 1.048724 TCCCCTGCCCTTGTATCTCG 61.049 60.000 0.00 0.00 0.00 4.04
1028 1033 1.447643 CCCTGCCCTTGTATCTCGG 59.552 63.158 0.00 0.00 0.00 4.63
1029 1034 1.227674 CCTGCCCTTGTATCTCGGC 60.228 63.158 0.00 0.00 41.99 5.54
1030 1035 1.690219 CCTGCCCTTGTATCTCGGCT 61.690 60.000 0.00 0.00 42.15 5.52
1031 1036 0.179000 CTGCCCTTGTATCTCGGCTT 59.821 55.000 0.00 0.00 42.15 4.35
1032 1037 0.178068 TGCCCTTGTATCTCGGCTTC 59.822 55.000 0.00 0.00 42.15 3.86
1033 1038 0.466124 GCCCTTGTATCTCGGCTTCT 59.534 55.000 0.00 0.00 38.41 2.85
1034 1039 1.539280 GCCCTTGTATCTCGGCTTCTC 60.539 57.143 0.00 0.00 38.41 2.87
1035 1040 1.069358 CCCTTGTATCTCGGCTTCTCC 59.931 57.143 0.00 0.00 0.00 3.71
1036 1041 1.069358 CCTTGTATCTCGGCTTCTCCC 59.931 57.143 0.00 0.00 0.00 4.30
1037 1042 1.757118 CTTGTATCTCGGCTTCTCCCA 59.243 52.381 0.00 0.00 0.00 4.37
1038 1043 1.112113 TGTATCTCGGCTTCTCCCAC 58.888 55.000 0.00 0.00 0.00 4.61
1039 1044 0.389757 GTATCTCGGCTTCTCCCACC 59.610 60.000 0.00 0.00 0.00 4.61
1040 1045 0.759436 TATCTCGGCTTCTCCCACCC 60.759 60.000 0.00 0.00 0.00 4.61
1041 1046 3.787001 CTCGGCTTCTCCCACCCC 61.787 72.222 0.00 0.00 0.00 4.95
1042 1047 4.649705 TCGGCTTCTCCCACCCCA 62.650 66.667 0.00 0.00 0.00 4.96
1043 1048 4.101448 CGGCTTCTCCCACCCCAG 62.101 72.222 0.00 0.00 0.00 4.45
1044 1049 4.432741 GGCTTCTCCCACCCCAGC 62.433 72.222 0.00 0.00 0.00 4.85
1045 1050 4.785453 GCTTCTCCCACCCCAGCG 62.785 72.222 0.00 0.00 0.00 5.18
1046 1051 4.785453 CTTCTCCCACCCCAGCGC 62.785 72.222 0.00 0.00 0.00 5.92
1049 1054 4.431131 CTCCCACCCCAGCGCAAT 62.431 66.667 11.47 0.00 0.00 3.56
1050 1055 4.424711 TCCCACCCCAGCGCAATC 62.425 66.667 11.47 0.00 0.00 2.67
1052 1057 4.738998 CCACCCCAGCGCAATCCA 62.739 66.667 11.47 0.00 0.00 3.41
1053 1058 3.443045 CACCCCAGCGCAATCCAC 61.443 66.667 11.47 0.00 0.00 4.02
1056 1061 3.499737 CCCAGCGCAATCCACGTC 61.500 66.667 11.47 0.00 0.00 4.34
1057 1062 2.434884 CCAGCGCAATCCACGTCT 60.435 61.111 11.47 0.00 0.00 4.18
1058 1063 2.034879 CCAGCGCAATCCACGTCTT 61.035 57.895 11.47 0.00 0.00 3.01
1059 1064 1.421485 CAGCGCAATCCACGTCTTC 59.579 57.895 11.47 0.00 0.00 2.87
1060 1065 1.741770 AGCGCAATCCACGTCTTCC 60.742 57.895 11.47 0.00 0.00 3.46
1061 1066 1.741770 GCGCAATCCACGTCTTCCT 60.742 57.895 0.30 0.00 0.00 3.36
1062 1067 1.696832 GCGCAATCCACGTCTTCCTC 61.697 60.000 0.30 0.00 0.00 3.71
1063 1068 0.389817 CGCAATCCACGTCTTCCTCA 60.390 55.000 0.00 0.00 0.00 3.86
1064 1069 1.079503 GCAATCCACGTCTTCCTCAC 58.920 55.000 0.00 0.00 0.00 3.51
1065 1070 1.338200 GCAATCCACGTCTTCCTCACT 60.338 52.381 0.00 0.00 0.00 3.41
1066 1071 2.341257 CAATCCACGTCTTCCTCACTG 58.659 52.381 0.00 0.00 0.00 3.66
1067 1072 1.633774 ATCCACGTCTTCCTCACTGT 58.366 50.000 0.00 0.00 0.00 3.55
1068 1073 0.959553 TCCACGTCTTCCTCACTGTC 59.040 55.000 0.00 0.00 0.00 3.51
1069 1074 0.038159 CCACGTCTTCCTCACTGTCC 60.038 60.000 0.00 0.00 0.00 4.02
1070 1075 0.038159 CACGTCTTCCTCACTGTCCC 60.038 60.000 0.00 0.00 0.00 4.46
1071 1076 0.178958 ACGTCTTCCTCACTGTCCCT 60.179 55.000 0.00 0.00 0.00 4.20
1072 1077 0.244994 CGTCTTCCTCACTGTCCCTG 59.755 60.000 0.00 0.00 0.00 4.45
1073 1078 1.343069 GTCTTCCTCACTGTCCCTGT 58.657 55.000 0.00 0.00 0.00 4.00
1074 1079 1.273886 GTCTTCCTCACTGTCCCTGTC 59.726 57.143 0.00 0.00 0.00 3.51
1075 1080 0.610687 CTTCCTCACTGTCCCTGTCC 59.389 60.000 0.00 0.00 0.00 4.02
1076 1081 0.191064 TTCCTCACTGTCCCTGTCCT 59.809 55.000 0.00 0.00 0.00 3.85
1077 1082 0.251832 TCCTCACTGTCCCTGTCCTC 60.252 60.000 0.00 0.00 0.00 3.71
1078 1083 1.261238 CCTCACTGTCCCTGTCCTCC 61.261 65.000 0.00 0.00 0.00 4.30
1079 1084 0.252012 CTCACTGTCCCTGTCCTCCT 60.252 60.000 0.00 0.00 0.00 3.69
1080 1085 0.191064 TCACTGTCCCTGTCCTCCTT 59.809 55.000 0.00 0.00 0.00 3.36
1081 1086 0.610687 CACTGTCCCTGTCCTCCTTC 59.389 60.000 0.00 0.00 0.00 3.46
1082 1087 0.191064 ACTGTCCCTGTCCTCCTTCA 59.809 55.000 0.00 0.00 0.00 3.02
1083 1088 0.901124 CTGTCCCTGTCCTCCTTCAG 59.099 60.000 0.00 0.00 0.00 3.02
1084 1089 1.194781 TGTCCCTGTCCTCCTTCAGC 61.195 60.000 0.00 0.00 0.00 4.26
1085 1090 0.907230 GTCCCTGTCCTCCTTCAGCT 60.907 60.000 0.00 0.00 0.00 4.24
1086 1091 0.616111 TCCCTGTCCTCCTTCAGCTC 60.616 60.000 0.00 0.00 0.00 4.09
1087 1092 1.515020 CCTGTCCTCCTTCAGCTCG 59.485 63.158 0.00 0.00 0.00 5.03
1088 1093 1.254284 CCTGTCCTCCTTCAGCTCGT 61.254 60.000 0.00 0.00 0.00 4.18
1089 1094 0.605589 CTGTCCTCCTTCAGCTCGTT 59.394 55.000 0.00 0.00 0.00 3.85
1090 1095 0.318441 TGTCCTCCTTCAGCTCGTTG 59.682 55.000 0.00 0.00 0.00 4.10
1091 1096 1.016653 GTCCTCCTTCAGCTCGTTGC 61.017 60.000 0.00 0.00 43.29 4.17
1100 1105 2.908015 GCTCGTTGCTATGGGGGA 59.092 61.111 0.00 0.00 38.95 4.81
1101 1106 1.223487 GCTCGTTGCTATGGGGGAA 59.777 57.895 0.00 0.00 38.95 3.97
1102 1107 1.095807 GCTCGTTGCTATGGGGGAAC 61.096 60.000 0.00 0.00 38.95 3.62
1137 1142 4.821589 CGAGACGGGGCAAGCTCC 62.822 72.222 0.00 0.00 0.00 4.70
1138 1143 3.706373 GAGACGGGGCAAGCTCCA 61.706 66.667 12.15 0.00 36.01 3.86
1139 1144 3.959991 GAGACGGGGCAAGCTCCAC 62.960 68.421 12.15 4.46 36.01 4.02
1142 1147 4.785453 CGGGGCAAGCTCCACCTC 62.785 72.222 12.15 0.00 36.01 3.85
1143 1148 4.432741 GGGGCAAGCTCCACCTCC 62.433 72.222 5.98 0.00 36.36 4.30
1144 1149 3.650950 GGGCAAGCTCCACCTCCA 61.651 66.667 0.00 0.00 0.00 3.86
1145 1150 2.436109 GGCAAGCTCCACCTCCAA 59.564 61.111 0.00 0.00 0.00 3.53
1146 1151 1.000396 GGCAAGCTCCACCTCCAAT 60.000 57.895 0.00 0.00 0.00 3.16
1147 1152 1.034292 GGCAAGCTCCACCTCCAATC 61.034 60.000 0.00 0.00 0.00 2.67
1148 1153 0.034670 GCAAGCTCCACCTCCAATCT 60.035 55.000 0.00 0.00 0.00 2.40
1149 1154 2.016096 GCAAGCTCCACCTCCAATCTC 61.016 57.143 0.00 0.00 0.00 2.75
1150 1155 1.558756 CAAGCTCCACCTCCAATCTCT 59.441 52.381 0.00 0.00 0.00 3.10
1151 1156 1.963985 AGCTCCACCTCCAATCTCTT 58.036 50.000 0.00 0.00 0.00 2.85
1152 1157 1.836802 AGCTCCACCTCCAATCTCTTC 59.163 52.381 0.00 0.00 0.00 2.87
1153 1158 1.556911 GCTCCACCTCCAATCTCTTCA 59.443 52.381 0.00 0.00 0.00 3.02
1154 1159 2.679349 GCTCCACCTCCAATCTCTTCAC 60.679 54.545 0.00 0.00 0.00 3.18
1155 1160 1.909302 TCCACCTCCAATCTCTTCACC 59.091 52.381 0.00 0.00 0.00 4.02
1156 1161 1.065126 CCACCTCCAATCTCTTCACCC 60.065 57.143 0.00 0.00 0.00 4.61
1157 1162 1.630369 CACCTCCAATCTCTTCACCCA 59.370 52.381 0.00 0.00 0.00 4.51
1158 1163 2.040278 CACCTCCAATCTCTTCACCCAA 59.960 50.000 0.00 0.00 0.00 4.12
1159 1164 2.716424 ACCTCCAATCTCTTCACCCAAA 59.284 45.455 0.00 0.00 0.00 3.28
1160 1165 3.334881 ACCTCCAATCTCTTCACCCAAAT 59.665 43.478 0.00 0.00 0.00 2.32
1161 1166 4.202716 ACCTCCAATCTCTTCACCCAAATT 60.203 41.667 0.00 0.00 0.00 1.82
1162 1167 5.015178 ACCTCCAATCTCTTCACCCAAATTA 59.985 40.000 0.00 0.00 0.00 1.40
1163 1168 6.131961 CCTCCAATCTCTTCACCCAAATTAT 58.868 40.000 0.00 0.00 0.00 1.28
1164 1169 6.608808 CCTCCAATCTCTTCACCCAAATTATT 59.391 38.462 0.00 0.00 0.00 1.40
1165 1170 7.779798 CCTCCAATCTCTTCACCCAAATTATTA 59.220 37.037 0.00 0.00 0.00 0.98
1166 1171 8.519799 TCCAATCTCTTCACCCAAATTATTAC 57.480 34.615 0.00 0.00 0.00 1.89
1167 1172 7.559897 TCCAATCTCTTCACCCAAATTATTACC 59.440 37.037 0.00 0.00 0.00 2.85
1168 1173 7.417612 CAATCTCTTCACCCAAATTATTACCG 58.582 38.462 0.00 0.00 0.00 4.02
1169 1174 6.302535 TCTCTTCACCCAAATTATTACCGA 57.697 37.500 0.00 0.00 0.00 4.69
1170 1175 6.713276 TCTCTTCACCCAAATTATTACCGAA 58.287 36.000 0.00 0.00 0.00 4.30
1171 1176 6.821665 TCTCTTCACCCAAATTATTACCGAAG 59.178 38.462 0.00 0.00 0.00 3.79
1172 1177 5.355910 TCTTCACCCAAATTATTACCGAAGC 59.644 40.000 0.00 0.00 0.00 3.86
1173 1178 3.623960 TCACCCAAATTATTACCGAAGCG 59.376 43.478 0.00 0.00 0.00 4.68
1174 1179 3.623960 CACCCAAATTATTACCGAAGCGA 59.376 43.478 0.00 0.00 0.00 4.93
1175 1180 4.095185 CACCCAAATTATTACCGAAGCGAA 59.905 41.667 0.00 0.00 0.00 4.70
1176 1181 4.095334 ACCCAAATTATTACCGAAGCGAAC 59.905 41.667 0.00 0.00 0.00 3.95
1177 1182 4.095185 CCCAAATTATTACCGAAGCGAACA 59.905 41.667 0.00 0.00 0.00 3.18
1178 1183 5.025826 CCAAATTATTACCGAAGCGAACAC 58.974 41.667 0.00 0.00 0.00 3.32
1179 1184 4.509915 AATTATTACCGAAGCGAACACG 57.490 40.909 0.00 0.00 0.00 4.49
1180 1185 2.634982 TATTACCGAAGCGAACACGT 57.365 45.000 0.00 0.00 0.00 4.49
1181 1186 1.343506 ATTACCGAAGCGAACACGTC 58.656 50.000 0.00 0.00 0.00 4.34
1193 1198 2.967740 ACACGTCGTGTTCCACTTC 58.032 52.632 24.87 0.00 45.08 3.01
1194 1199 0.529119 ACACGTCGTGTTCCACTTCC 60.529 55.000 24.87 0.00 45.08 3.46
1195 1200 0.249322 CACGTCGTGTTCCACTTCCT 60.249 55.000 17.30 0.00 31.34 3.36
1196 1201 0.031721 ACGTCGTGTTCCACTTCCTC 59.968 55.000 0.00 0.00 31.34 3.71
1197 1202 0.031585 CGTCGTGTTCCACTTCCTCA 59.968 55.000 0.00 0.00 31.34 3.86
1198 1203 1.537348 CGTCGTGTTCCACTTCCTCAA 60.537 52.381 0.00 0.00 31.34 3.02
1199 1204 2.557317 GTCGTGTTCCACTTCCTCAAA 58.443 47.619 0.00 0.00 31.34 2.69
1200 1205 2.940410 GTCGTGTTCCACTTCCTCAAAA 59.060 45.455 0.00 0.00 31.34 2.44
1201 1206 3.002348 GTCGTGTTCCACTTCCTCAAAAG 59.998 47.826 0.00 0.00 31.34 2.27
1202 1207 2.943033 CGTGTTCCACTTCCTCAAAAGT 59.057 45.455 0.00 0.00 40.08 2.66
1203 1208 3.377172 CGTGTTCCACTTCCTCAAAAGTT 59.623 43.478 0.00 0.00 37.38 2.66
1204 1209 4.495844 CGTGTTCCACTTCCTCAAAAGTTC 60.496 45.833 0.00 0.00 37.38 3.01
1205 1210 4.640647 GTGTTCCACTTCCTCAAAAGTTCT 59.359 41.667 0.00 0.00 37.38 3.01
1206 1211 5.820947 GTGTTCCACTTCCTCAAAAGTTCTA 59.179 40.000 0.00 0.00 37.38 2.10
1207 1212 6.486993 GTGTTCCACTTCCTCAAAAGTTCTAT 59.513 38.462 0.00 0.00 37.38 1.98
1208 1213 7.013369 GTGTTCCACTTCCTCAAAAGTTCTATT 59.987 37.037 0.00 0.00 37.38 1.73
1209 1214 7.559897 TGTTCCACTTCCTCAAAAGTTCTATTT 59.440 33.333 0.00 0.00 37.38 1.40
1210 1215 7.510549 TCCACTTCCTCAAAAGTTCTATTTG 57.489 36.000 0.00 0.00 37.38 2.32
1211 1216 7.287061 TCCACTTCCTCAAAAGTTCTATTTGA 58.713 34.615 2.19 2.19 42.73 2.69
1212 1217 7.944554 TCCACTTCCTCAAAAGTTCTATTTGAT 59.055 33.333 2.54 0.00 43.61 2.57
1213 1218 8.239998 CCACTTCCTCAAAAGTTCTATTTGATC 58.760 37.037 2.54 0.00 43.61 2.92
1214 1219 9.007901 CACTTCCTCAAAAGTTCTATTTGATCT 57.992 33.333 2.54 0.00 43.61 2.75
1215 1220 9.007901 ACTTCCTCAAAAGTTCTATTTGATCTG 57.992 33.333 2.54 0.00 43.61 2.90
1216 1221 7.928307 TCCTCAAAAGTTCTATTTGATCTGG 57.072 36.000 2.54 1.94 43.61 3.86
1217 1222 6.886459 TCCTCAAAAGTTCTATTTGATCTGGG 59.114 38.462 2.54 1.64 43.61 4.45
1218 1223 6.886459 CCTCAAAAGTTCTATTTGATCTGGGA 59.114 38.462 2.54 0.00 43.61 4.37
1219 1224 7.148171 CCTCAAAAGTTCTATTTGATCTGGGAC 60.148 40.741 2.54 0.00 43.61 4.46
1220 1225 6.659242 TCAAAAGTTCTATTTGATCTGGGACC 59.341 38.462 0.00 0.00 40.75 4.46
1221 1226 5.779241 AAGTTCTATTTGATCTGGGACCA 57.221 39.130 0.00 0.00 0.00 4.02
1222 1227 5.365021 AGTTCTATTTGATCTGGGACCAG 57.635 43.478 12.16 12.16 44.86 4.00
1231 1236 0.991920 TCTGGGACCAGACCAATTCC 59.008 55.000 16.79 0.00 46.80 3.01
1232 1237 0.698238 CTGGGACCAGACCAATTCCA 59.302 55.000 13.06 0.00 46.30 3.53
1233 1238 1.075374 CTGGGACCAGACCAATTCCAA 59.925 52.381 13.06 0.00 46.30 3.53
1234 1239 1.715931 TGGGACCAGACCAATTCCAAT 59.284 47.619 0.00 0.00 34.44 3.16
1235 1240 2.111613 TGGGACCAGACCAATTCCAATT 59.888 45.455 0.00 0.00 34.44 2.32
1236 1241 3.173151 GGGACCAGACCAATTCCAATTT 58.827 45.455 0.00 0.00 0.00 1.82
1237 1242 3.055891 GGGACCAGACCAATTCCAATTTG 60.056 47.826 0.00 0.00 0.00 2.32
1238 1243 3.055891 GGACCAGACCAATTCCAATTTGG 60.056 47.826 9.28 9.28 39.43 3.28
1239 1244 2.302733 ACCAGACCAATTCCAATTTGGC 59.697 45.455 10.76 0.00 37.47 4.52
1240 1245 2.302445 CCAGACCAATTCCAATTTGGCA 59.698 45.455 10.76 0.00 37.47 4.92
1241 1246 3.054948 CCAGACCAATTCCAATTTGGCAT 60.055 43.478 10.76 2.36 37.47 4.40
1242 1247 3.936453 CAGACCAATTCCAATTTGGCATG 59.064 43.478 10.76 8.82 37.47 4.06
1243 1248 3.839490 AGACCAATTCCAATTTGGCATGA 59.161 39.130 10.76 0.00 37.47 3.07
1244 1249 4.472108 AGACCAATTCCAATTTGGCATGAT 59.528 37.500 10.76 0.00 37.47 2.45
1245 1250 4.519213 ACCAATTCCAATTTGGCATGATG 58.481 39.130 10.76 2.10 37.47 3.07
1246 1251 3.314080 CCAATTCCAATTTGGCATGATGC 59.686 43.478 9.33 9.33 44.08 3.91
1255 1260 3.255032 GCATGATGCCCTACCCCT 58.745 61.111 6.04 0.00 37.42 4.79
1256 1261 1.228367 GCATGATGCCCTACCCCTG 60.228 63.158 6.04 0.00 37.42 4.45
1257 1262 1.228367 CATGATGCCCTACCCCTGC 60.228 63.158 0.00 0.00 0.00 4.85
1258 1263 2.822637 ATGATGCCCTACCCCTGCG 61.823 63.158 0.00 0.00 0.00 5.18
1259 1264 4.256180 GATGCCCTACCCCTGCGG 62.256 72.222 0.00 0.00 37.81 5.69
1331 1336 0.909623 GGTACTACACATGGCCAGGT 59.090 55.000 19.28 19.28 0.00 4.00
1350 1355 4.803426 GTGACTGGGAGAGCGGCG 62.803 72.222 0.51 0.51 0.00 6.46
1367 1372 2.558313 GAAGGAACTGCAGCACGC 59.442 61.111 15.27 0.00 40.86 5.34
1410 1415 3.330853 GCATCGCCGTCATCGTCC 61.331 66.667 0.00 0.00 35.01 4.79
1440 1445 3.129502 GCAGCCATCGCAGCTTCA 61.130 61.111 0.00 0.00 43.71 3.02
1452 1457 2.260743 GCTTCAGCTTTGGCAGGC 59.739 61.111 6.44 6.44 41.70 4.85
1488 1493 4.385405 GGGCTCGTGCTCTGCTGT 62.385 66.667 9.61 0.00 36.57 4.40
1503 1508 1.409064 TGCTGTATCCGTAGCAAGAGG 59.591 52.381 0.00 0.00 46.06 3.69
1544 1552 3.808174 GCTATCATAACCGAACCTGAACC 59.192 47.826 0.00 0.00 0.00 3.62
1545 1553 4.443034 GCTATCATAACCGAACCTGAACCT 60.443 45.833 0.00 0.00 0.00 3.50
1548 1556 3.517901 TCATAACCGAACCTGAACCTCAT 59.482 43.478 0.00 0.00 0.00 2.90
1578 1586 0.832559 GGCCTAGGGAGTTCCGCTAT 60.833 60.000 11.72 0.00 39.23 2.97
1638 1647 2.446802 AAGATCGGGAGAGGGGGC 60.447 66.667 0.00 0.00 45.48 5.80
1641 1650 2.042930 ATCGGGAGAGGGGGCTTT 59.957 61.111 0.00 0.00 45.48 3.51
1650 1659 4.735358 GGGGGCTTTGGTCCGGTC 62.735 72.222 0.00 0.00 38.30 4.79
1655 1664 0.035739 GGCTTTGGTCCGGTCTACAA 59.964 55.000 0.00 0.00 0.00 2.41
1668 1677 3.097614 GGTCTACAAAGGCTACCTGAGA 58.902 50.000 0.00 0.00 32.13 3.27
1671 1680 4.463186 GTCTACAAAGGCTACCTGAGAGAA 59.537 45.833 0.00 0.00 32.13 2.87
1698 1707 1.825090 GTCATGTGGCCATCAAGACA 58.175 50.000 25.40 14.07 0.00 3.41
1703 1712 2.256306 TGTGGCCATCAAGACACTCTA 58.744 47.619 9.72 0.00 35.02 2.43
1704 1713 2.840038 TGTGGCCATCAAGACACTCTAT 59.160 45.455 9.72 0.00 35.02 1.98
1724 1733 1.074566 TGTCTCAGTCTCAGAGGAGCA 59.925 52.381 0.00 0.00 41.13 4.26
1726 1735 0.457035 CTCAGTCTCAGAGGAGCAGC 59.543 60.000 0.00 0.00 41.13 5.25
1729 1741 1.685421 GTCTCAGAGGAGCAGCCCT 60.685 63.158 2.25 2.25 41.13 5.19
1759 1771 1.229209 AAGGAGTTCCAGGCGGAGA 60.229 57.895 0.28 0.00 44.10 3.71
1761 1773 0.261991 AGGAGTTCCAGGCGGAGATA 59.738 55.000 0.28 0.00 44.10 1.98
2145 2169 2.434359 GGCAACGCTAAGCTCGGT 60.434 61.111 0.00 0.00 0.00 4.69
2201 2225 3.712881 GCCACGGACGACACAAGC 61.713 66.667 0.00 0.00 0.00 4.01
2245 2269 2.600769 ACCCGGAGCTCGTCAACT 60.601 61.111 0.73 0.00 37.11 3.16
2250 2274 1.739562 GGAGCTCGTCAACTGCCAG 60.740 63.158 7.83 0.00 0.00 4.85
2286 2310 1.081641 CGACGTGTACAGCTTCGGT 60.082 57.895 11.21 0.00 0.00 4.69
2298 2322 0.388134 GCTTCGGTGTCGTGCTTCTA 60.388 55.000 0.00 0.00 37.69 2.10
2345 2393 4.715523 GGGGTTGCTGCTGGCGTA 62.716 66.667 0.00 0.00 45.43 4.42
2505 2553 2.225255 GTCCGTTACCGAGGCTATAGAC 59.775 54.545 3.21 0.00 35.63 2.59
2553 2611 0.806102 CGATGCTCGGTGGAACGATT 60.806 55.000 0.00 0.00 42.62 3.34
2554 2612 0.652592 GATGCTCGGTGGAACGATTG 59.347 55.000 0.00 0.00 42.62 2.67
2591 2652 1.774966 TCTCCTTGGAGAGACGGGT 59.225 57.895 14.79 0.00 37.98 5.28
2597 2658 1.542915 CTTGGAGAGACGGGTTTACGA 59.457 52.381 0.00 0.00 37.61 3.43
2598 2659 0.883833 TGGAGAGACGGGTTTACGAC 59.116 55.000 0.00 0.00 37.61 4.34
2599 2660 0.179179 GGAGAGACGGGTTTACGACG 60.179 60.000 0.00 0.00 37.61 5.12
2618 2679 1.138047 GGTGACGACGCGTTATCTGG 61.138 60.000 15.53 1.34 41.37 3.86
2640 2701 5.530915 TGGAAACTCAAACTCTGGTTATGTG 59.469 40.000 0.00 0.00 34.90 3.21
2641 2702 5.438761 AAACTCAAACTCTGGTTATGTGC 57.561 39.130 0.00 0.00 34.90 4.57
2642 2703 4.085357 ACTCAAACTCTGGTTATGTGCA 57.915 40.909 0.00 0.00 34.90 4.57
2643 2704 4.655963 ACTCAAACTCTGGTTATGTGCAT 58.344 39.130 0.00 0.00 34.90 3.96
2644 2705 4.456911 ACTCAAACTCTGGTTATGTGCATG 59.543 41.667 0.00 0.00 34.90 4.06
2645 2706 3.191162 TCAAACTCTGGTTATGTGCATGC 59.809 43.478 11.82 11.82 34.90 4.06
2646 2707 2.495155 ACTCTGGTTATGTGCATGCA 57.505 45.000 18.46 18.46 0.00 3.96
2647 2708 3.008835 ACTCTGGTTATGTGCATGCAT 57.991 42.857 25.64 11.73 0.00 3.96
2664 2725 3.016031 TGCATGCATTCAAACCGAGTAT 58.984 40.909 18.46 0.00 0.00 2.12
2698 2759 7.878127 TCGAGTATTCAACTTTTCTCTTTCCAT 59.122 33.333 0.00 0.00 39.07 3.41
2707 2768 9.780413 CAACTTTTCTCTTTCCATAAGAATAGC 57.220 33.333 0.00 0.00 33.83 2.97
2709 2770 9.520515 ACTTTTCTCTTTCCATAAGAATAGCAA 57.479 29.630 0.00 0.00 33.83 3.91
2736 2797 2.358615 TGCATGCACCCACGACTC 60.359 61.111 18.46 0.00 0.00 3.36
2750 2811 5.011329 ACCCACGACTCTTTGTATCTGTAAA 59.989 40.000 0.00 0.00 0.00 2.01
2827 2888 4.487714 TTCATGTGACCTCCCATAACTC 57.512 45.455 0.00 0.00 0.00 3.01
2887 2948 7.254590 GGCTATGCTTAGTAGTTGACATCTTTG 60.255 40.741 8.30 0.00 0.00 2.77
2928 2994 6.418057 TCCATTTTATTTTGTGAGCCTTGT 57.582 33.333 0.00 0.00 0.00 3.16
2939 3005 3.754850 TGTGAGCCTTGTCATCTGAATTG 59.245 43.478 0.00 0.00 0.00 2.32
3028 3096 0.394565 ACAGAGAGGTGCCAACACTC 59.605 55.000 0.00 0.00 46.57 3.51
3029 3097 0.668706 CAGAGAGGTGCCAACACTCG 60.669 60.000 1.41 0.00 46.57 4.18
3030 3098 1.374758 GAGAGGTGCCAACACTCGG 60.375 63.158 0.00 0.00 46.57 4.63
3031 3099 2.358737 GAGGTGCCAACACTCGGG 60.359 66.667 0.00 0.00 46.57 5.14
3037 3105 4.988598 CCAACACTCGGGCGCTGT 62.989 66.667 7.64 0.00 0.00 4.40
3038 3106 2.972505 CAACACTCGGGCGCTGTT 60.973 61.111 7.64 6.77 0.00 3.16
3039 3107 2.665185 AACACTCGGGCGCTGTTC 60.665 61.111 7.64 0.00 0.00 3.18
3049 3117 3.414700 CGCTGTTCGGCAGTCCAC 61.415 66.667 4.50 0.00 46.64 4.02
3050 3118 3.050275 GCTGTTCGGCAGTCCACC 61.050 66.667 9.08 0.00 46.64 4.61
3051 3119 2.358737 CTGTTCGGCAGTCCACCC 60.359 66.667 0.00 0.00 40.27 4.61
3052 3120 4.308458 TGTTCGGCAGTCCACCCG 62.308 66.667 0.00 0.00 45.64 5.28
3059 3127 4.742201 CAGTCCACCCGCTCCGTG 62.742 72.222 0.00 0.00 0.00 4.94
3060 3128 4.988716 AGTCCACCCGCTCCGTGA 62.989 66.667 0.00 0.00 32.77 4.35
3061 3129 3.998672 GTCCACCCGCTCCGTGAA 61.999 66.667 0.00 0.00 32.77 3.18
3062 3130 3.235481 TCCACCCGCTCCGTGAAA 61.235 61.111 0.00 0.00 32.77 2.69
3063 3131 2.281208 CCACCCGCTCCGTGAAAA 60.281 61.111 0.00 0.00 32.77 2.29
3064 3132 1.674322 CCACCCGCTCCGTGAAAAT 60.674 57.895 0.00 0.00 32.77 1.82
3065 3133 1.241315 CCACCCGCTCCGTGAAAATT 61.241 55.000 0.00 0.00 32.77 1.82
3066 3134 1.444836 CACCCGCTCCGTGAAAATTA 58.555 50.000 0.00 0.00 32.77 1.40
3067 3135 1.807742 CACCCGCTCCGTGAAAATTAA 59.192 47.619 0.00 0.00 32.77 1.40
3068 3136 2.081462 ACCCGCTCCGTGAAAATTAAG 58.919 47.619 0.00 0.00 0.00 1.85
3069 3137 2.289819 ACCCGCTCCGTGAAAATTAAGA 60.290 45.455 0.00 0.00 0.00 2.10
3070 3138 2.745281 CCCGCTCCGTGAAAATTAAGAA 59.255 45.455 0.00 0.00 0.00 2.52
3071 3139 3.377172 CCCGCTCCGTGAAAATTAAGAAT 59.623 43.478 0.00 0.00 0.00 2.40
3072 3140 4.495844 CCCGCTCCGTGAAAATTAAGAATC 60.496 45.833 0.00 0.00 0.00 2.52
3073 3141 4.332819 CCGCTCCGTGAAAATTAAGAATCT 59.667 41.667 0.00 0.00 0.00 2.40
3074 3142 5.493735 CGCTCCGTGAAAATTAAGAATCTC 58.506 41.667 0.00 0.00 0.00 2.75
3075 3143 5.292101 CGCTCCGTGAAAATTAAGAATCTCT 59.708 40.000 0.00 0.00 0.00 3.10
3076 3144 6.481984 GCTCCGTGAAAATTAAGAATCTCTG 58.518 40.000 0.00 0.00 0.00 3.35
3077 3145 6.457528 GCTCCGTGAAAATTAAGAATCTCTGG 60.458 42.308 0.00 0.00 0.00 3.86
3078 3146 6.707290 TCCGTGAAAATTAAGAATCTCTGGA 58.293 36.000 0.00 0.00 0.00 3.86
3079 3147 6.818644 TCCGTGAAAATTAAGAATCTCTGGAG 59.181 38.462 0.00 0.00 0.00 3.86
3080 3148 6.595716 CCGTGAAAATTAAGAATCTCTGGAGT 59.404 38.462 0.00 0.00 0.00 3.85
3081 3149 7.764443 CCGTGAAAATTAAGAATCTCTGGAGTA 59.236 37.037 0.00 0.00 0.00 2.59
3082 3150 8.596380 CGTGAAAATTAAGAATCTCTGGAGTAC 58.404 37.037 0.00 0.00 0.00 2.73
3083 3151 8.884726 GTGAAAATTAAGAATCTCTGGAGTACC 58.115 37.037 0.00 0.00 0.00 3.34
3084 3152 8.826765 TGAAAATTAAGAATCTCTGGAGTACCT 58.173 33.333 0.00 0.00 37.04 3.08
3085 3153 9.674068 GAAAATTAAGAATCTCTGGAGTACCTT 57.326 33.333 0.00 0.00 37.04 3.50
3087 3155 9.674068 AAATTAAGAATCTCTGGAGTACCTTTC 57.326 33.333 0.00 0.00 37.04 2.62
3088 3156 5.685520 AAGAATCTCTGGAGTACCTTTCC 57.314 43.478 0.00 0.00 37.04 3.13
3089 3157 3.702045 AGAATCTCTGGAGTACCTTTCCG 59.298 47.826 0.00 0.00 37.54 4.30
3090 3158 1.183549 TCTCTGGAGTACCTTTCCGC 58.816 55.000 0.00 0.00 37.54 5.54
3091 3159 1.187087 CTCTGGAGTACCTTTCCGCT 58.813 55.000 0.00 0.00 37.54 5.52
3092 3160 1.135333 CTCTGGAGTACCTTTCCGCTC 59.865 57.143 0.00 0.00 37.54 5.03
3093 3161 0.179134 CTGGAGTACCTTTCCGCTCG 60.179 60.000 0.00 0.00 37.54 5.03
3094 3162 1.518792 GGAGTACCTTTCCGCTCGC 60.519 63.158 0.00 0.00 0.00 5.03
3095 3163 1.511768 GAGTACCTTTCCGCTCGCT 59.488 57.895 0.00 0.00 0.00 4.93
3096 3164 0.525882 GAGTACCTTTCCGCTCGCTC 60.526 60.000 0.00 0.00 0.00 5.03
3097 3165 1.518792 GTACCTTTCCGCTCGCTCC 60.519 63.158 0.00 0.00 0.00 4.70
3098 3166 3.060020 TACCTTTCCGCTCGCTCCG 62.060 63.158 0.00 0.00 0.00 4.63
3105 3173 3.414700 CGCTCGCTCCGCACTTTT 61.415 61.111 0.00 0.00 0.00 2.27
3106 3174 2.946762 GCTCGCTCCGCACTTTTT 59.053 55.556 0.00 0.00 0.00 1.94
3107 3175 1.623081 CGCTCGCTCCGCACTTTTTA 61.623 55.000 0.00 0.00 0.00 1.52
3108 3176 0.515564 GCTCGCTCCGCACTTTTTAA 59.484 50.000 0.00 0.00 0.00 1.52
3109 3177 1.724973 GCTCGCTCCGCACTTTTTAAC 60.725 52.381 0.00 0.00 0.00 2.01
3110 3178 1.798813 CTCGCTCCGCACTTTTTAACT 59.201 47.619 0.00 0.00 0.00 2.24
3111 3179 2.991190 CTCGCTCCGCACTTTTTAACTA 59.009 45.455 0.00 0.00 0.00 2.24
3112 3180 2.991190 TCGCTCCGCACTTTTTAACTAG 59.009 45.455 0.00 0.00 0.00 2.57
3113 3181 2.991190 CGCTCCGCACTTTTTAACTAGA 59.009 45.455 0.00 0.00 0.00 2.43
3114 3182 3.430895 CGCTCCGCACTTTTTAACTAGAA 59.569 43.478 0.00 0.00 0.00 2.10
3115 3183 4.092968 CGCTCCGCACTTTTTAACTAGAAT 59.907 41.667 0.00 0.00 0.00 2.40
3116 3184 5.390567 CGCTCCGCACTTTTTAACTAGAATT 60.391 40.000 0.00 0.00 0.00 2.17
3117 3185 6.022208 GCTCCGCACTTTTTAACTAGAATTC 58.978 40.000 0.00 0.00 0.00 2.17
3118 3186 6.490566 TCCGCACTTTTTAACTAGAATTCC 57.509 37.500 0.65 0.00 0.00 3.01
3119 3187 5.121142 TCCGCACTTTTTAACTAGAATTCCG 59.879 40.000 0.65 0.00 0.00 4.30
3120 3188 5.106830 CCGCACTTTTTAACTAGAATTCCGT 60.107 40.000 0.65 0.00 0.00 4.69
3121 3189 6.013689 CGCACTTTTTAACTAGAATTCCGTC 58.986 40.000 0.65 0.00 0.00 4.79
3122 3190 6.347079 CGCACTTTTTAACTAGAATTCCGTCA 60.347 38.462 0.65 0.00 0.00 4.35
3123 3191 7.015877 GCACTTTTTAACTAGAATTCCGTCAG 58.984 38.462 0.65 0.00 0.00 3.51
3124 3192 7.015877 CACTTTTTAACTAGAATTCCGTCAGC 58.984 38.462 0.65 0.00 0.00 4.26
3125 3193 6.935208 ACTTTTTAACTAGAATTCCGTCAGCT 59.065 34.615 0.65 0.00 0.00 4.24
3126 3194 6.963049 TTTTAACTAGAATTCCGTCAGCTC 57.037 37.500 0.65 0.00 0.00 4.09
3127 3195 3.528597 AACTAGAATTCCGTCAGCTCC 57.471 47.619 0.65 0.00 0.00 4.70
3128 3196 1.405821 ACTAGAATTCCGTCAGCTCCG 59.594 52.381 0.65 0.00 0.00 4.63
3129 3197 0.744874 TAGAATTCCGTCAGCTCCGG 59.255 55.000 13.93 13.93 46.83 5.14
3130 3198 1.521681 GAATTCCGTCAGCTCCGGG 60.522 63.158 18.59 4.52 45.51 5.73
3131 3199 1.956629 GAATTCCGTCAGCTCCGGGA 61.957 60.000 18.59 12.38 45.51 5.14
3132 3200 1.961180 AATTCCGTCAGCTCCGGGAG 61.961 60.000 19.95 19.95 45.51 4.30
3166 3234 3.003763 AGGGACTCCGAACAGGCC 61.004 66.667 0.00 0.00 41.65 5.19
3167 3235 3.003763 GGGACTCCGAACAGGCCT 61.004 66.667 0.00 0.00 42.12 5.19
3168 3236 2.593956 GGGACTCCGAACAGGCCTT 61.594 63.158 0.00 0.00 42.12 4.35
3182 3250 6.035758 CGAACAGGCCTTAAGTATAACACTTC 59.964 42.308 0.00 0.00 44.48 3.01
3195 3263 1.258676 ACACTTCGTCCCTTCTCCTC 58.741 55.000 0.00 0.00 0.00 3.71
3201 3269 3.664551 TCGTCCCTTCTCCTCTATTCA 57.335 47.619 0.00 0.00 0.00 2.57
3208 3276 6.887002 GTCCCTTCTCCTCTATTCATTTTTGT 59.113 38.462 0.00 0.00 0.00 2.83
3244 3312 6.267014 TCCTCTATTTTTCGGTCGAATATCCT 59.733 38.462 6.63 0.00 33.79 3.24
3312 3380 1.543429 GCTGGGCTATACATGGTCACC 60.543 57.143 0.00 0.00 0.00 4.02
3344 3412 4.318546 CGTTTGAAGACGGTAGGAAAACTG 60.319 45.833 0.00 0.00 39.27 3.16
3345 3413 4.411256 TTGAAGACGGTAGGAAAACTGT 57.589 40.909 0.00 0.00 41.70 3.55
3346 3414 5.534207 TTGAAGACGGTAGGAAAACTGTA 57.466 39.130 0.00 0.00 39.09 2.74
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
6 7 2.052590 CGACCAACCGCAACAACG 60.053 61.111 0.00 0.00 0.00 4.10
86 87 2.356741 GGATCCGTCCCAAGAAATCCAA 60.357 50.000 0.00 0.00 38.69 3.53
153 154 4.754411 AGGAAATGATGATAGGGGCATT 57.246 40.909 0.00 0.00 32.75 3.56
317 319 4.720902 TCGTCCGCTGGTCCCGTA 62.721 66.667 0.00 0.00 0.00 4.02
373 375 3.574445 CCGTCGAGATCCGTCGCT 61.574 66.667 14.16 0.00 45.60 4.93
398 400 1.272490 TCGAACTCCGAATCTGCACTT 59.728 47.619 0.00 0.00 45.43 3.16
551 556 0.105453 AGGATGTCTGCCGGGTATCT 60.105 55.000 2.18 0.00 0.00 1.98
552 557 0.034059 CAGGATGTCTGCCGGGTATC 59.966 60.000 2.18 0.00 36.60 2.24
601 606 2.842462 ACGCCTGCCGGATATGGA 60.842 61.111 5.05 0.00 42.52 3.41
636 641 6.569610 CGCAGCCAAACCTAAAAATCTAAGAA 60.570 38.462 0.00 0.00 0.00 2.52
645 650 2.227865 GACATCGCAGCCAAACCTAAAA 59.772 45.455 0.00 0.00 0.00 1.52
711 716 6.534634 AGAAACAACTGTGGCTACTTCTATT 58.465 36.000 0.64 0.00 0.00 1.73
716 721 5.925509 TCTAAGAAACAACTGTGGCTACTT 58.074 37.500 0.64 0.00 0.00 2.24
733 738 5.023452 TCAGACTAAAGCCACCATCTAAGA 58.977 41.667 0.00 0.00 0.00 2.10
740 745 2.047061 ACAGTCAGACTAAAGCCACCA 58.953 47.619 1.67 0.00 0.00 4.17
867 872 2.598589 CACATTCGCTTCCAATTGGTG 58.401 47.619 23.76 17.82 36.34 4.17
868 873 1.067635 GCACATTCGCTTCCAATTGGT 60.068 47.619 23.76 0.00 36.34 3.67
869 874 1.203052 AGCACATTCGCTTCCAATTGG 59.797 47.619 19.08 19.08 39.99 3.16
870 875 2.163010 AGAGCACATTCGCTTCCAATTG 59.837 45.455 0.00 0.00 44.01 2.32
871 876 2.440409 AGAGCACATTCGCTTCCAATT 58.560 42.857 0.00 0.00 44.01 2.32
872 877 2.119801 AGAGCACATTCGCTTCCAAT 57.880 45.000 0.00 0.00 44.01 3.16
873 878 2.760634 TAGAGCACATTCGCTTCCAA 57.239 45.000 0.00 0.00 44.01 3.53
874 879 2.988010 ATAGAGCACATTCGCTTCCA 57.012 45.000 0.00 0.00 44.01 3.53
875 880 3.623060 TCAAATAGAGCACATTCGCTTCC 59.377 43.478 0.00 0.00 44.01 3.46
876 881 4.864916 TCAAATAGAGCACATTCGCTTC 57.135 40.909 0.00 0.00 44.01 3.86
877 882 4.036027 CCATCAAATAGAGCACATTCGCTT 59.964 41.667 0.00 0.00 44.01 4.68
879 884 3.851105 GCCATCAAATAGAGCACATTCGC 60.851 47.826 0.00 0.00 0.00 4.70
880 885 3.304257 GGCCATCAAATAGAGCACATTCG 60.304 47.826 0.00 0.00 0.00 3.34
881 886 3.633525 TGGCCATCAAATAGAGCACATTC 59.366 43.478 0.00 0.00 0.00 2.67
882 887 3.634504 TGGCCATCAAATAGAGCACATT 58.365 40.909 0.00 0.00 0.00 2.71
883 888 3.117776 TCTGGCCATCAAATAGAGCACAT 60.118 43.478 5.51 0.00 0.00 3.21
884 889 2.239402 TCTGGCCATCAAATAGAGCACA 59.761 45.455 5.51 0.00 0.00 4.57
885 890 2.923121 TCTGGCCATCAAATAGAGCAC 58.077 47.619 5.51 0.00 0.00 4.40
886 891 3.200605 TCTTCTGGCCATCAAATAGAGCA 59.799 43.478 5.51 0.00 0.00 4.26
887 892 3.813443 TCTTCTGGCCATCAAATAGAGC 58.187 45.455 5.51 0.00 0.00 4.09
888 893 3.814283 GCTCTTCTGGCCATCAAATAGAG 59.186 47.826 5.51 12.84 32.22 2.43
889 894 3.813443 GCTCTTCTGGCCATCAAATAGA 58.187 45.455 5.51 0.00 0.00 1.98
907 912 2.781158 GGGAGACGAGAGCTGGCTC 61.781 68.421 14.02 14.02 43.03 4.70
908 913 2.757917 GGGAGACGAGAGCTGGCT 60.758 66.667 0.00 0.00 0.00 4.75
909 914 2.757917 AGGGAGACGAGAGCTGGC 60.758 66.667 0.00 0.00 0.00 4.85
910 915 3.074999 GCAGGGAGACGAGAGCTGG 62.075 68.421 0.00 0.00 0.00 4.85
911 916 1.881903 TTGCAGGGAGACGAGAGCTG 61.882 60.000 0.00 0.00 0.00 4.24
912 917 1.607756 TTGCAGGGAGACGAGAGCT 60.608 57.895 0.00 0.00 0.00 4.09
913 918 1.446966 GTTGCAGGGAGACGAGAGC 60.447 63.158 0.00 0.00 0.00 4.09
914 919 1.216710 GGTTGCAGGGAGACGAGAG 59.783 63.158 0.00 0.00 0.00 3.20
915 920 2.283529 GGGTTGCAGGGAGACGAGA 61.284 63.158 0.00 0.00 0.00 4.04
916 921 2.232298 GAGGGTTGCAGGGAGACGAG 62.232 65.000 0.00 0.00 0.00 4.18
917 922 2.203788 AGGGTTGCAGGGAGACGA 60.204 61.111 0.00 0.00 0.00 4.20
918 923 1.831652 AAGAGGGTTGCAGGGAGACG 61.832 60.000 0.00 0.00 0.00 4.18
919 924 0.035915 GAAGAGGGTTGCAGGGAGAC 60.036 60.000 0.00 0.00 0.00 3.36
920 925 0.178891 AGAAGAGGGTTGCAGGGAGA 60.179 55.000 0.00 0.00 0.00 3.71
921 926 0.695347 AAGAAGAGGGTTGCAGGGAG 59.305 55.000 0.00 0.00 0.00 4.30
922 927 0.401738 CAAGAAGAGGGTTGCAGGGA 59.598 55.000 0.00 0.00 0.00 4.20
923 928 1.246737 GCAAGAAGAGGGTTGCAGGG 61.247 60.000 2.26 0.00 46.83 4.45
924 929 2.261215 GCAAGAAGAGGGTTGCAGG 58.739 57.895 2.26 0.00 46.83 4.85
927 932 0.540597 AAGGGCAAGAAGAGGGTTGC 60.541 55.000 0.00 0.00 46.88 4.17
928 933 2.001076 AAAGGGCAAGAAGAGGGTTG 57.999 50.000 0.00 0.00 0.00 3.77
929 934 2.775490 AAAAGGGCAAGAAGAGGGTT 57.225 45.000 0.00 0.00 0.00 4.11
930 935 2.177888 AGAAAAAGGGCAAGAAGAGGGT 59.822 45.455 0.00 0.00 0.00 4.34
931 936 2.881734 AGAAAAAGGGCAAGAAGAGGG 58.118 47.619 0.00 0.00 0.00 4.30
932 937 4.148079 AGAAGAAAAAGGGCAAGAAGAGG 58.852 43.478 0.00 0.00 0.00 3.69
933 938 5.300286 TGAAGAAGAAAAAGGGCAAGAAGAG 59.700 40.000 0.00 0.00 0.00 2.85
934 939 5.200483 TGAAGAAGAAAAAGGGCAAGAAGA 58.800 37.500 0.00 0.00 0.00 2.87
935 940 5.520376 TGAAGAAGAAAAAGGGCAAGAAG 57.480 39.130 0.00 0.00 0.00 2.85
936 941 5.598005 TGATGAAGAAGAAAAAGGGCAAGAA 59.402 36.000 0.00 0.00 0.00 2.52
937 942 5.139727 TGATGAAGAAGAAAAAGGGCAAGA 58.860 37.500 0.00 0.00 0.00 3.02
938 943 5.458041 TGATGAAGAAGAAAAAGGGCAAG 57.542 39.130 0.00 0.00 0.00 4.01
939 944 5.539574 TGATGATGAAGAAGAAAAAGGGCAA 59.460 36.000 0.00 0.00 0.00 4.52
940 945 5.047802 GTGATGATGAAGAAGAAAAAGGGCA 60.048 40.000 0.00 0.00 0.00 5.36
941 946 5.405797 GTGATGATGAAGAAGAAAAAGGGC 58.594 41.667 0.00 0.00 0.00 5.19
942 947 5.713861 AGGTGATGATGAAGAAGAAAAAGGG 59.286 40.000 0.00 0.00 0.00 3.95
943 948 6.830873 AGGTGATGATGAAGAAGAAAAAGG 57.169 37.500 0.00 0.00 0.00 3.11
944 949 8.558973 AGTAGGTGATGATGAAGAAGAAAAAG 57.441 34.615 0.00 0.00 0.00 2.27
945 950 8.786898 CAAGTAGGTGATGATGAAGAAGAAAAA 58.213 33.333 0.00 0.00 0.00 1.94
946 951 8.156820 TCAAGTAGGTGATGATGAAGAAGAAAA 58.843 33.333 0.00 0.00 0.00 2.29
947 952 7.679783 TCAAGTAGGTGATGATGAAGAAGAAA 58.320 34.615 0.00 0.00 0.00 2.52
948 953 7.244886 TCAAGTAGGTGATGATGAAGAAGAA 57.755 36.000 0.00 0.00 0.00 2.52
949 954 6.857437 TCAAGTAGGTGATGATGAAGAAGA 57.143 37.500 0.00 0.00 0.00 2.87
950 955 7.499292 AGATCAAGTAGGTGATGATGAAGAAG 58.501 38.462 0.00 0.00 38.38 2.85
951 956 7.429374 AGATCAAGTAGGTGATGATGAAGAA 57.571 36.000 0.00 0.00 38.38 2.52
952 957 7.429374 AAGATCAAGTAGGTGATGATGAAGA 57.571 36.000 0.00 0.00 38.38 2.87
953 958 7.226325 GGAAAGATCAAGTAGGTGATGATGAAG 59.774 40.741 0.00 0.00 38.38 3.02
954 959 7.050377 GGAAAGATCAAGTAGGTGATGATGAA 58.950 38.462 0.00 0.00 38.38 2.57
955 960 6.408548 GGGAAAGATCAAGTAGGTGATGATGA 60.409 42.308 0.00 0.00 38.38 2.92
956 961 5.762218 GGGAAAGATCAAGTAGGTGATGATG 59.238 44.000 0.00 0.00 38.38 3.07
957 962 5.429762 TGGGAAAGATCAAGTAGGTGATGAT 59.570 40.000 0.00 0.00 38.38 2.45
958 963 4.782691 TGGGAAAGATCAAGTAGGTGATGA 59.217 41.667 0.00 0.00 38.38 2.92
959 964 5.102953 TGGGAAAGATCAAGTAGGTGATG 57.897 43.478 0.00 0.00 38.38 3.07
960 965 5.192522 ACATGGGAAAGATCAAGTAGGTGAT 59.807 40.000 0.00 0.00 41.01 3.06
961 966 4.536090 ACATGGGAAAGATCAAGTAGGTGA 59.464 41.667 0.00 0.00 0.00 4.02
962 967 4.848357 ACATGGGAAAGATCAAGTAGGTG 58.152 43.478 0.00 0.00 0.00 4.00
963 968 4.536090 TGACATGGGAAAGATCAAGTAGGT 59.464 41.667 0.00 0.00 0.00 3.08
964 969 5.102953 TGACATGGGAAAGATCAAGTAGG 57.897 43.478 0.00 0.00 0.00 3.18
965 970 5.762218 GGATGACATGGGAAAGATCAAGTAG 59.238 44.000 0.00 0.00 0.00 2.57
966 971 5.191522 TGGATGACATGGGAAAGATCAAGTA 59.808 40.000 0.00 0.00 0.00 2.24
967 972 4.018141 TGGATGACATGGGAAAGATCAAGT 60.018 41.667 0.00 0.00 0.00 3.16
968 973 4.529897 TGGATGACATGGGAAAGATCAAG 58.470 43.478 0.00 0.00 0.00 3.02
969 974 4.589647 TGGATGACATGGGAAAGATCAA 57.410 40.909 0.00 0.00 0.00 2.57
970 975 4.414514 AGATGGATGACATGGGAAAGATCA 59.585 41.667 0.00 0.00 40.72 2.92
971 976 4.983053 AGATGGATGACATGGGAAAGATC 58.017 43.478 0.00 0.00 40.72 2.75
972 977 5.103813 TGAAGATGGATGACATGGGAAAGAT 60.104 40.000 0.00 0.00 40.72 2.40
973 978 4.227982 TGAAGATGGATGACATGGGAAAGA 59.772 41.667 0.00 0.00 40.72 2.52
974 979 4.529897 TGAAGATGGATGACATGGGAAAG 58.470 43.478 0.00 0.00 40.72 2.62
975 980 4.589647 TGAAGATGGATGACATGGGAAA 57.410 40.909 0.00 0.00 40.72 3.13
976 981 4.272489 GTTGAAGATGGATGACATGGGAA 58.728 43.478 0.00 0.00 40.72 3.97
977 982 3.371917 GGTTGAAGATGGATGACATGGGA 60.372 47.826 0.00 0.00 40.72 4.37
978 983 2.954318 GGTTGAAGATGGATGACATGGG 59.046 50.000 0.00 0.00 40.72 4.00
979 984 3.623703 TGGTTGAAGATGGATGACATGG 58.376 45.455 0.00 0.00 40.72 3.66
980 985 4.643334 ACATGGTTGAAGATGGATGACATG 59.357 41.667 0.00 0.00 40.72 3.21
981 986 4.863548 ACATGGTTGAAGATGGATGACAT 58.136 39.130 0.00 0.00 44.18 3.06
982 987 4.264253 GACATGGTTGAAGATGGATGACA 58.736 43.478 0.00 0.00 0.00 3.58
983 988 3.629398 GGACATGGTTGAAGATGGATGAC 59.371 47.826 0.00 0.00 0.00 3.06
984 989 3.266513 TGGACATGGTTGAAGATGGATGA 59.733 43.478 0.00 0.00 0.00 2.92
985 990 3.623703 TGGACATGGTTGAAGATGGATG 58.376 45.455 0.00 0.00 0.00 3.51
986 991 4.531357 ATGGACATGGTTGAAGATGGAT 57.469 40.909 0.00 0.00 0.00 3.41
987 992 4.272489 GAATGGACATGGTTGAAGATGGA 58.728 43.478 0.00 0.00 0.00 3.41
988 993 3.382546 GGAATGGACATGGTTGAAGATGG 59.617 47.826 0.00 0.00 0.00 3.51
989 994 3.382546 GGGAATGGACATGGTTGAAGATG 59.617 47.826 0.00 0.00 0.00 2.90
990 995 3.628257 GGGGAATGGACATGGTTGAAGAT 60.628 47.826 0.00 0.00 0.00 2.40
991 996 2.291540 GGGGAATGGACATGGTTGAAGA 60.292 50.000 0.00 0.00 0.00 2.87
992 997 2.102578 GGGGAATGGACATGGTTGAAG 58.897 52.381 0.00 0.00 0.00 3.02
993 998 1.715931 AGGGGAATGGACATGGTTGAA 59.284 47.619 0.00 0.00 0.00 2.69
994 999 1.005805 CAGGGGAATGGACATGGTTGA 59.994 52.381 0.00 0.00 0.00 3.18
995 1000 1.477553 CAGGGGAATGGACATGGTTG 58.522 55.000 0.00 0.00 0.00 3.77
996 1001 0.324645 GCAGGGGAATGGACATGGTT 60.325 55.000 0.00 0.00 0.00 3.67
997 1002 1.307647 GCAGGGGAATGGACATGGT 59.692 57.895 0.00 0.00 0.00 3.55
998 1003 1.456331 GGCAGGGGAATGGACATGG 60.456 63.158 0.00 0.00 0.00 3.66
999 1004 1.456331 GGGCAGGGGAATGGACATG 60.456 63.158 0.00 0.00 0.00 3.21
1000 1005 1.224003 AAGGGCAGGGGAATGGACAT 61.224 55.000 0.00 0.00 0.00 3.06
1001 1006 1.856873 AAGGGCAGGGGAATGGACA 60.857 57.895 0.00 0.00 0.00 4.02
1002 1007 1.380380 CAAGGGCAGGGGAATGGAC 60.380 63.158 0.00 0.00 0.00 4.02
1003 1008 0.551377 TACAAGGGCAGGGGAATGGA 60.551 55.000 0.00 0.00 0.00 3.41
1004 1009 0.557729 ATACAAGGGCAGGGGAATGG 59.442 55.000 0.00 0.00 0.00 3.16
1005 1010 1.496429 AGATACAAGGGCAGGGGAATG 59.504 52.381 0.00 0.00 0.00 2.67
1006 1011 1.777272 GAGATACAAGGGCAGGGGAAT 59.223 52.381 0.00 0.00 0.00 3.01
1007 1012 1.213296 GAGATACAAGGGCAGGGGAA 58.787 55.000 0.00 0.00 0.00 3.97
1008 1013 1.048724 CGAGATACAAGGGCAGGGGA 61.049 60.000 0.00 0.00 0.00 4.81
1009 1014 1.447643 CGAGATACAAGGGCAGGGG 59.552 63.158 0.00 0.00 0.00 4.79
1010 1015 1.447643 CCGAGATACAAGGGCAGGG 59.552 63.158 0.00 0.00 0.00 4.45
1011 1016 1.227674 GCCGAGATACAAGGGCAGG 60.228 63.158 0.00 0.00 44.91 4.85
1012 1017 4.445699 GCCGAGATACAAGGGCAG 57.554 61.111 0.00 0.00 44.91 4.85
1014 1019 0.466124 AGAAGCCGAGATACAAGGGC 59.534 55.000 0.00 0.00 45.91 5.19
1015 1020 1.069358 GGAGAAGCCGAGATACAAGGG 59.931 57.143 0.00 0.00 0.00 3.95
1016 1021 1.069358 GGGAGAAGCCGAGATACAAGG 59.931 57.143 0.00 0.00 37.63 3.61
1017 1022 1.757118 TGGGAGAAGCCGAGATACAAG 59.243 52.381 0.00 0.00 37.63 3.16
1018 1023 1.480954 GTGGGAGAAGCCGAGATACAA 59.519 52.381 0.00 0.00 37.63 2.41
1019 1024 1.112113 GTGGGAGAAGCCGAGATACA 58.888 55.000 0.00 0.00 37.63 2.29
1020 1025 0.389757 GGTGGGAGAAGCCGAGATAC 59.610 60.000 0.00 0.00 37.63 2.24
1021 1026 0.759436 GGGTGGGAGAAGCCGAGATA 60.759 60.000 0.00 0.00 37.63 1.98
1022 1027 2.066999 GGGTGGGAGAAGCCGAGAT 61.067 63.158 0.00 0.00 37.63 2.75
1023 1028 2.683933 GGGTGGGAGAAGCCGAGA 60.684 66.667 0.00 0.00 37.63 4.04
1024 1029 3.787001 GGGGTGGGAGAAGCCGAG 61.787 72.222 0.00 0.00 38.68 4.63
1025 1030 4.649705 TGGGGTGGGAGAAGCCGA 62.650 66.667 0.00 0.00 38.68 5.54
1026 1031 4.101448 CTGGGGTGGGAGAAGCCG 62.101 72.222 0.00 0.00 38.68 5.52
1027 1032 4.432741 GCTGGGGTGGGAGAAGCC 62.433 72.222 0.00 0.00 36.97 4.35
1028 1033 4.785453 CGCTGGGGTGGGAGAAGC 62.785 72.222 0.00 0.00 0.00 3.86
1029 1034 4.785453 GCGCTGGGGTGGGAGAAG 62.785 72.222 0.00 0.00 0.00 2.85
1032 1037 4.431131 ATTGCGCTGGGGTGGGAG 62.431 66.667 9.73 0.00 0.00 4.30
1033 1038 4.424711 GATTGCGCTGGGGTGGGA 62.425 66.667 9.73 0.00 0.00 4.37
1035 1040 4.738998 TGGATTGCGCTGGGGTGG 62.739 66.667 9.73 0.00 0.00 4.61
1036 1041 3.443045 GTGGATTGCGCTGGGGTG 61.443 66.667 9.73 0.00 0.00 4.61
1039 1044 3.499737 GACGTGGATTGCGCTGGG 61.500 66.667 9.73 0.00 0.00 4.45
1040 1045 1.970917 GAAGACGTGGATTGCGCTGG 61.971 60.000 9.73 0.00 0.00 4.85
1041 1046 1.421485 GAAGACGTGGATTGCGCTG 59.579 57.895 9.73 0.00 0.00 5.18
1042 1047 1.741770 GGAAGACGTGGATTGCGCT 60.742 57.895 9.73 0.00 0.00 5.92
1043 1048 1.696832 GAGGAAGACGTGGATTGCGC 61.697 60.000 0.00 0.00 0.00 6.09
1044 1049 0.389817 TGAGGAAGACGTGGATTGCG 60.390 55.000 0.00 0.00 0.00 4.85
1045 1050 1.079503 GTGAGGAAGACGTGGATTGC 58.920 55.000 0.00 0.00 0.00 3.56
1046 1051 2.289072 ACAGTGAGGAAGACGTGGATTG 60.289 50.000 0.00 0.00 0.00 2.67
1047 1052 1.971357 ACAGTGAGGAAGACGTGGATT 59.029 47.619 0.00 0.00 0.00 3.01
1048 1053 1.546476 GACAGTGAGGAAGACGTGGAT 59.454 52.381 0.00 0.00 0.00 3.41
1049 1054 0.959553 GACAGTGAGGAAGACGTGGA 59.040 55.000 0.00 0.00 0.00 4.02
1050 1055 0.038159 GGACAGTGAGGAAGACGTGG 60.038 60.000 0.00 0.00 0.00 4.94
1051 1056 0.038159 GGGACAGTGAGGAAGACGTG 60.038 60.000 0.00 0.00 0.00 4.49
1052 1057 0.178958 AGGGACAGTGAGGAAGACGT 60.179 55.000 0.00 0.00 0.00 4.34
1053 1058 0.244994 CAGGGACAGTGAGGAAGACG 59.755 60.000 0.00 0.00 0.00 4.18
1054 1059 1.273886 GACAGGGACAGTGAGGAAGAC 59.726 57.143 0.00 0.00 0.00 3.01
1055 1060 1.633774 GACAGGGACAGTGAGGAAGA 58.366 55.000 0.00 0.00 0.00 2.87
1056 1061 0.610687 GGACAGGGACAGTGAGGAAG 59.389 60.000 0.00 0.00 0.00 3.46
1057 1062 0.191064 AGGACAGGGACAGTGAGGAA 59.809 55.000 0.00 0.00 0.00 3.36
1058 1063 0.251832 GAGGACAGGGACAGTGAGGA 60.252 60.000 0.00 0.00 0.00 3.71
1059 1064 1.261238 GGAGGACAGGGACAGTGAGG 61.261 65.000 0.00 0.00 0.00 3.86
1060 1065 0.252012 AGGAGGACAGGGACAGTGAG 60.252 60.000 0.00 0.00 0.00 3.51
1061 1066 0.191064 AAGGAGGACAGGGACAGTGA 59.809 55.000 0.00 0.00 0.00 3.41
1062 1067 0.610687 GAAGGAGGACAGGGACAGTG 59.389 60.000 0.00 0.00 0.00 3.66
1063 1068 0.191064 TGAAGGAGGACAGGGACAGT 59.809 55.000 0.00 0.00 0.00 3.55
1064 1069 0.901124 CTGAAGGAGGACAGGGACAG 59.099 60.000 0.00 0.00 0.00 3.51
1065 1070 1.194781 GCTGAAGGAGGACAGGGACA 61.195 60.000 0.00 0.00 35.05 4.02
1066 1071 0.907230 AGCTGAAGGAGGACAGGGAC 60.907 60.000 0.00 0.00 35.05 4.46
1067 1072 0.616111 GAGCTGAAGGAGGACAGGGA 60.616 60.000 0.00 0.00 35.05 4.20
1068 1073 1.904032 GAGCTGAAGGAGGACAGGG 59.096 63.158 0.00 0.00 35.05 4.45
1069 1074 1.254284 ACGAGCTGAAGGAGGACAGG 61.254 60.000 0.00 0.00 35.05 4.00
1070 1075 0.605589 AACGAGCTGAAGGAGGACAG 59.394 55.000 0.00 0.00 37.22 3.51
1071 1076 0.318441 CAACGAGCTGAAGGAGGACA 59.682 55.000 0.00 0.00 0.00 4.02
1072 1077 1.016653 GCAACGAGCTGAAGGAGGAC 61.017 60.000 0.00 0.00 41.15 3.85
1073 1078 1.293498 GCAACGAGCTGAAGGAGGA 59.707 57.895 0.00 0.00 41.15 3.71
1074 1079 3.882025 GCAACGAGCTGAAGGAGG 58.118 61.111 0.00 0.00 41.15 4.30
1083 1088 1.095807 GTTCCCCCATAGCAACGAGC 61.096 60.000 0.00 0.00 46.19 5.03
1084 1089 0.463833 GGTTCCCCCATAGCAACGAG 60.464 60.000 0.00 0.00 0.00 4.18
1085 1090 1.202099 TGGTTCCCCCATAGCAACGA 61.202 55.000 0.00 0.00 38.72 3.85
1086 1091 1.301623 TGGTTCCCCCATAGCAACG 59.698 57.895 0.00 0.00 38.72 4.10
1120 1125 4.821589 GGAGCTTGCCCCGTCTCG 62.822 72.222 0.00 0.00 0.00 4.04
1121 1126 3.706373 TGGAGCTTGCCCCGTCTC 61.706 66.667 0.00 0.00 0.00 3.36
1122 1127 4.021925 GTGGAGCTTGCCCCGTCT 62.022 66.667 0.00 0.00 0.00 4.18
1125 1130 4.785453 GAGGTGGAGCTTGCCCCG 62.785 72.222 0.00 0.00 0.00 5.73
1126 1131 4.432741 GGAGGTGGAGCTTGCCCC 62.433 72.222 0.00 0.00 0.00 5.80
1127 1132 2.505364 ATTGGAGGTGGAGCTTGCCC 62.505 60.000 0.00 0.00 0.00 5.36
1128 1133 1.000396 ATTGGAGGTGGAGCTTGCC 60.000 57.895 0.00 0.00 0.00 4.52
1129 1134 0.034670 AGATTGGAGGTGGAGCTTGC 60.035 55.000 0.00 0.00 0.00 4.01
1130 1135 1.558756 AGAGATTGGAGGTGGAGCTTG 59.441 52.381 0.00 0.00 0.00 4.01
1131 1136 1.963985 AGAGATTGGAGGTGGAGCTT 58.036 50.000 0.00 0.00 0.00 3.74
1132 1137 1.836802 GAAGAGATTGGAGGTGGAGCT 59.163 52.381 0.00 0.00 0.00 4.09
1133 1138 1.556911 TGAAGAGATTGGAGGTGGAGC 59.443 52.381 0.00 0.00 0.00 4.70
1134 1139 2.093235 GGTGAAGAGATTGGAGGTGGAG 60.093 54.545 0.00 0.00 0.00 3.86
1135 1140 1.909302 GGTGAAGAGATTGGAGGTGGA 59.091 52.381 0.00 0.00 0.00 4.02
1136 1141 1.065126 GGGTGAAGAGATTGGAGGTGG 60.065 57.143 0.00 0.00 0.00 4.61
1137 1142 1.630369 TGGGTGAAGAGATTGGAGGTG 59.370 52.381 0.00 0.00 0.00 4.00
1138 1143 2.044793 TGGGTGAAGAGATTGGAGGT 57.955 50.000 0.00 0.00 0.00 3.85
1139 1144 3.439857 TTTGGGTGAAGAGATTGGAGG 57.560 47.619 0.00 0.00 0.00 4.30
1140 1145 7.651027 AATAATTTGGGTGAAGAGATTGGAG 57.349 36.000 0.00 0.00 0.00 3.86
1141 1146 7.559897 GGTAATAATTTGGGTGAAGAGATTGGA 59.440 37.037 0.00 0.00 0.00 3.53
1142 1147 7.468631 CGGTAATAATTTGGGTGAAGAGATTGG 60.469 40.741 0.00 0.00 0.00 3.16
1143 1148 7.282224 TCGGTAATAATTTGGGTGAAGAGATTG 59.718 37.037 0.00 0.00 0.00 2.67
1144 1149 7.343357 TCGGTAATAATTTGGGTGAAGAGATT 58.657 34.615 0.00 0.00 0.00 2.40
1145 1150 6.895782 TCGGTAATAATTTGGGTGAAGAGAT 58.104 36.000 0.00 0.00 0.00 2.75
1146 1151 6.302535 TCGGTAATAATTTGGGTGAAGAGA 57.697 37.500 0.00 0.00 0.00 3.10
1147 1152 6.458342 GCTTCGGTAATAATTTGGGTGAAGAG 60.458 42.308 2.60 0.00 33.85 2.85
1148 1153 5.355910 GCTTCGGTAATAATTTGGGTGAAGA 59.644 40.000 2.60 0.00 33.85 2.87
1149 1154 5.578776 GCTTCGGTAATAATTTGGGTGAAG 58.421 41.667 0.00 0.00 34.83 3.02
1150 1155 4.095185 CGCTTCGGTAATAATTTGGGTGAA 59.905 41.667 0.00 0.00 0.00 3.18
1151 1156 3.623960 CGCTTCGGTAATAATTTGGGTGA 59.376 43.478 0.00 0.00 0.00 4.02
1152 1157 3.623960 TCGCTTCGGTAATAATTTGGGTG 59.376 43.478 0.00 0.00 0.00 4.61
1153 1158 3.876341 TCGCTTCGGTAATAATTTGGGT 58.124 40.909 0.00 0.00 0.00 4.51
1154 1159 4.095185 TGTTCGCTTCGGTAATAATTTGGG 59.905 41.667 0.00 0.00 0.00 4.12
1155 1160 5.025826 GTGTTCGCTTCGGTAATAATTTGG 58.974 41.667 0.00 0.00 0.00 3.28
1156 1161 4.721977 CGTGTTCGCTTCGGTAATAATTTG 59.278 41.667 0.00 0.00 0.00 2.32
1157 1162 4.389687 ACGTGTTCGCTTCGGTAATAATTT 59.610 37.500 0.00 0.00 41.18 1.82
1158 1163 3.928375 ACGTGTTCGCTTCGGTAATAATT 59.072 39.130 0.00 0.00 41.18 1.40
1159 1164 3.514645 ACGTGTTCGCTTCGGTAATAAT 58.485 40.909 0.00 0.00 41.18 1.28
1160 1165 2.916716 GACGTGTTCGCTTCGGTAATAA 59.083 45.455 0.00 0.00 41.18 1.40
1161 1166 2.518949 GACGTGTTCGCTTCGGTAATA 58.481 47.619 0.00 0.00 41.18 0.98
1162 1167 1.343506 GACGTGTTCGCTTCGGTAAT 58.656 50.000 0.00 0.00 41.18 1.89
1163 1168 0.998226 CGACGTGTTCGCTTCGGTAA 60.998 55.000 0.00 0.00 41.87 2.85
1164 1169 1.440850 CGACGTGTTCGCTTCGGTA 60.441 57.895 0.00 0.00 41.87 4.02
1165 1170 2.728383 CGACGTGTTCGCTTCGGT 60.728 61.111 0.00 0.00 41.87 4.69
1183 1188 4.855340 AGAACTTTTGAGGAAGTGGAACA 58.145 39.130 0.00 0.00 41.43 3.18
1184 1189 7.511959 AATAGAACTTTTGAGGAAGTGGAAC 57.488 36.000 0.00 0.00 39.68 3.62
1185 1190 7.777910 TCAAATAGAACTTTTGAGGAAGTGGAA 59.222 33.333 0.00 0.00 39.68 3.53
1186 1191 7.287061 TCAAATAGAACTTTTGAGGAAGTGGA 58.713 34.615 0.00 0.00 39.68 4.02
1187 1192 7.510549 TCAAATAGAACTTTTGAGGAAGTGG 57.489 36.000 0.00 0.00 39.68 4.00
1188 1193 9.007901 AGATCAAATAGAACTTTTGAGGAAGTG 57.992 33.333 0.00 0.00 43.96 3.16
1189 1194 9.007901 CAGATCAAATAGAACTTTTGAGGAAGT 57.992 33.333 0.00 0.00 43.96 3.01
1190 1195 8.457261 CCAGATCAAATAGAACTTTTGAGGAAG 58.543 37.037 0.00 0.00 43.96 3.46
1191 1196 7.394359 CCCAGATCAAATAGAACTTTTGAGGAA 59.606 37.037 0.00 0.00 43.96 3.36
1192 1197 6.886459 CCCAGATCAAATAGAACTTTTGAGGA 59.114 38.462 0.00 0.00 43.96 3.71
1193 1198 6.886459 TCCCAGATCAAATAGAACTTTTGAGG 59.114 38.462 0.00 1.83 43.96 3.86
1194 1199 7.148171 GGTCCCAGATCAAATAGAACTTTTGAG 60.148 40.741 0.00 0.00 43.96 3.02
1195 1200 6.659242 GGTCCCAGATCAAATAGAACTTTTGA 59.341 38.462 0.00 1.76 44.60 2.69
1196 1201 6.434028 TGGTCCCAGATCAAATAGAACTTTTG 59.566 38.462 0.00 0.00 35.79 2.44
1197 1202 6.552008 TGGTCCCAGATCAAATAGAACTTTT 58.448 36.000 0.00 0.00 0.00 2.27
1198 1203 6.012508 TCTGGTCCCAGATCAAATAGAACTTT 60.013 38.462 12.01 0.00 46.80 2.66
1199 1204 5.488919 TCTGGTCCCAGATCAAATAGAACTT 59.511 40.000 12.01 0.00 46.80 2.66
1200 1205 5.032846 TCTGGTCCCAGATCAAATAGAACT 58.967 41.667 12.01 0.00 46.80 3.01
1201 1206 5.359194 TCTGGTCCCAGATCAAATAGAAC 57.641 43.478 12.01 0.00 46.80 3.01
1213 1218 0.698238 TGGAATTGGTCTGGTCCCAG 59.302 55.000 7.02 7.02 44.86 4.45
1214 1219 1.153539 TTGGAATTGGTCTGGTCCCA 58.846 50.000 0.00 0.00 0.00 4.37
1215 1220 2.532250 ATTGGAATTGGTCTGGTCCC 57.468 50.000 0.00 0.00 0.00 4.46
1216 1221 3.055891 CCAAATTGGAATTGGTCTGGTCC 60.056 47.826 6.04 0.00 40.96 4.46
1217 1222 4.192429 CCAAATTGGAATTGGTCTGGTC 57.808 45.455 6.04 0.00 40.96 4.02
1225 1230 4.545823 GCATCATGCCAAATTGGAATTG 57.454 40.909 17.47 8.23 40.96 2.32
1238 1243 1.228367 CAGGGGTAGGGCATCATGC 60.228 63.158 0.00 0.00 44.08 4.06
1239 1244 1.228367 GCAGGGGTAGGGCATCATG 60.228 63.158 0.00 0.00 0.00 3.07
1240 1245 2.822637 CGCAGGGGTAGGGCATCAT 61.823 63.158 0.00 0.00 0.00 2.45
1241 1246 3.479203 CGCAGGGGTAGGGCATCA 61.479 66.667 0.00 0.00 0.00 3.07
1261 1266 4.941309 AACACGAACACCGCCCCC 62.941 66.667 0.00 0.00 43.32 5.40
1262 1267 3.351416 GAACACGAACACCGCCCC 61.351 66.667 0.00 0.00 43.32 5.80
1263 1268 3.351416 GGAACACGAACACCGCCC 61.351 66.667 0.00 0.00 43.32 6.13
1331 1336 3.059982 CCGCTCTCCCAGTCACAA 58.940 61.111 0.00 0.00 0.00 3.33
1350 1355 2.558313 GCGTGCTGCAGTTCCTTC 59.442 61.111 16.64 0.00 45.45 3.46
1390 1395 3.390017 CGATGACGGCGATGCGAG 61.390 66.667 16.62 0.00 35.72 5.03
1400 1405 0.803768 CTTCAGCCAGGACGATGACG 60.804 60.000 0.00 0.00 45.75 4.35
1440 1445 0.039326 AGATCAAGCCTGCCAAAGCT 59.961 50.000 0.00 0.00 42.40 3.74
1452 1457 1.600957 CCTGTTATGGCGCAGATCAAG 59.399 52.381 10.83 0.00 34.87 3.02
1488 1493 0.666913 GCGTCCTCTTGCTACGGATA 59.333 55.000 0.00 0.00 37.12 2.59
1503 1508 3.558411 GATGTGCTCTGCCGCGTC 61.558 66.667 4.92 0.00 0.00 5.19
1544 1552 3.917760 GCCCCGGTCCTCGATGAG 61.918 72.222 0.00 0.00 42.43 2.90
1548 1556 4.517934 CTAGGCCCCGGTCCTCGA 62.518 72.222 14.99 0.00 42.43 4.04
1556 1564 3.162154 GGAACTCCCTAGGCCCCG 61.162 72.222 2.05 0.00 0.00 5.73
1620 1628 2.812619 GCCCCCTCTCCCGATCTTG 61.813 68.421 0.00 0.00 0.00 3.02
1638 1647 2.423577 CCTTTGTAGACCGGACCAAAG 58.576 52.381 20.39 20.39 42.03 2.77
1641 1650 0.834687 AGCCTTTGTAGACCGGACCA 60.835 55.000 9.46 0.00 0.00 4.02
1650 1659 4.220821 TGTTCTCTCAGGTAGCCTTTGTAG 59.779 45.833 0.00 0.00 0.00 2.74
1655 1664 2.183679 CCTGTTCTCTCAGGTAGCCTT 58.816 52.381 4.75 0.00 46.92 4.35
1668 1677 0.321671 CCACATGACGGTCCTGTTCT 59.678 55.000 15.13 0.00 0.00 3.01
1671 1680 2.347490 GCCACATGACGGTCCTGT 59.653 61.111 12.47 12.47 0.00 4.00
1698 1707 4.473196 TCCTCTGAGACTGAGACATAGAGT 59.527 45.833 6.17 0.00 32.36 3.24
1703 1712 2.291475 TGCTCCTCTGAGACTGAGACAT 60.291 50.000 6.17 0.00 41.42 3.06
1704 1713 1.074566 TGCTCCTCTGAGACTGAGACA 59.925 52.381 6.17 4.76 41.42 3.41
1707 1716 0.457035 GCTGCTCCTCTGAGACTGAG 59.543 60.000 6.17 5.70 41.42 3.35
1708 1717 0.969917 GGCTGCTCCTCTGAGACTGA 60.970 60.000 6.17 0.00 41.42 3.41
1710 1719 1.685421 GGGCTGCTCCTCTGAGACT 60.685 63.158 6.17 0.00 41.42 3.24
1729 1741 0.472471 AACTCCTTGAAACCCTGCGA 59.528 50.000 0.00 0.00 0.00 5.10
1730 1742 0.875059 GAACTCCTTGAAACCCTGCG 59.125 55.000 0.00 0.00 0.00 5.18
1738 1750 1.125093 TCCGCCTGGAACTCCTTGAA 61.125 55.000 0.00 0.00 42.85 2.69
1759 1771 0.978146 AGCTGGCTCAGGACGGTTAT 60.978 55.000 4.65 0.00 31.21 1.89
1761 1773 2.925170 AGCTGGCTCAGGACGGTT 60.925 61.111 4.65 0.00 31.21 4.44
1787 1799 1.512926 GACGAGCTGGACAATGTTGT 58.487 50.000 1.44 0.00 45.65 3.32
1975 1999 8.625786 TGTCAATCTCATTTTTCTTCATCAGA 57.374 30.769 0.00 0.00 0.00 3.27
1984 2008 7.373493 AGTTGTGGATGTCAATCTCATTTTTC 58.627 34.615 0.00 0.00 32.95 2.29
1988 2012 6.684686 CAAAGTTGTGGATGTCAATCTCATT 58.315 36.000 0.00 0.00 32.95 2.57
1989 2013 5.336213 GCAAAGTTGTGGATGTCAATCTCAT 60.336 40.000 0.00 0.00 32.95 2.90
1997 2021 1.956477 ACCTGCAAAGTTGTGGATGTC 59.044 47.619 10.64 0.00 0.00 3.06
2145 2169 4.069232 CTCGCCAGCCCGAAGTCA 62.069 66.667 0.00 0.00 36.72 3.41
2167 2191 4.592192 CTCGGCGCCATGGTCGAT 62.592 66.667 28.98 0.00 0.00 3.59
2226 2250 2.282958 TTGACGAGCTCCGGGTCT 60.283 61.111 17.58 0.00 43.93 3.85
2286 2310 1.064208 GCGATCTCTAGAAGCACGACA 59.936 52.381 10.79 0.00 33.81 4.35
2332 2380 3.958147 GAGCCTACGCCAGCAGCAA 62.958 63.158 0.00 0.00 44.04 3.91
2333 2381 4.457496 GAGCCTACGCCAGCAGCA 62.457 66.667 0.00 0.00 44.04 4.41
2345 2393 0.739813 GCGGTACATTTCACGAGCCT 60.740 55.000 0.00 0.00 0.00 4.58
2348 2396 0.999406 CTGGCGGTACATTTCACGAG 59.001 55.000 0.00 0.00 0.00 4.18
2349 2397 0.604073 TCTGGCGGTACATTTCACGA 59.396 50.000 0.00 0.00 0.00 4.35
2536 2588 0.744414 CCAATCGTTCCACCGAGCAT 60.744 55.000 0.00 0.00 40.68 3.79
2548 2606 2.349755 CCCGGAACCACCAATCGT 59.650 61.111 0.73 0.00 38.90 3.73
2553 2611 2.530661 ATGTCCCCGGAACCACCA 60.531 61.111 0.73 0.00 38.90 4.17
2554 2612 2.271173 GATGTCCCCGGAACCACC 59.729 66.667 0.73 0.00 0.00 4.61
2591 2652 1.725625 GCGTCGTCACCGTCGTAAA 60.726 57.895 0.00 0.00 45.18 2.01
2597 2658 1.512734 GATAACGCGTCGTCACCGT 60.513 57.895 14.44 0.00 39.99 4.83
2598 2659 1.226211 AGATAACGCGTCGTCACCG 60.226 57.895 14.44 0.00 39.99 4.94
2599 2660 1.138047 CCAGATAACGCGTCGTCACC 61.138 60.000 14.44 0.00 39.99 4.02
2618 2679 5.008613 TGCACATAACCAGAGTTTGAGTTTC 59.991 40.000 0.00 0.00 37.42 2.78
2641 2702 2.190161 CTCGGTTTGAATGCATGCATG 58.810 47.619 32.79 22.70 36.68 4.06
2642 2703 1.820519 ACTCGGTTTGAATGCATGCAT 59.179 42.857 27.46 27.46 38.46 3.96
2643 2704 1.246649 ACTCGGTTTGAATGCATGCA 58.753 45.000 25.04 25.04 0.00 3.96
2644 2705 3.313526 AGATACTCGGTTTGAATGCATGC 59.686 43.478 11.82 11.82 0.00 4.06
2645 2706 5.490139 AAGATACTCGGTTTGAATGCATG 57.510 39.130 0.00 0.00 0.00 4.06
2646 2707 6.258727 CAGTAAGATACTCGGTTTGAATGCAT 59.741 38.462 0.00 0.00 36.76 3.96
2647 2708 5.580691 CAGTAAGATACTCGGTTTGAATGCA 59.419 40.000 0.00 0.00 36.76 3.96
2664 2725 8.358148 AGAAAAGTTGAATACTCGACAGTAAGA 58.642 33.333 0.00 0.00 38.66 2.10
2698 2759 6.052360 TGCACCGATACATTTGCTATTCTTA 58.948 36.000 0.00 0.00 35.91 2.10
2707 2768 2.453080 GTGCATGCACCGATACATTTG 58.547 47.619 35.69 0.00 40.79 2.32
2733 2794 9.778741 TGACTGAATTTTACAGATACAAAGAGT 57.221 29.630 0.00 0.00 38.55 3.24
2736 2797 9.694520 CGATGACTGAATTTTACAGATACAAAG 57.305 33.333 0.00 0.00 38.55 2.77
2827 2888 0.512952 CGGTTGGTTTGCTTCTCTCG 59.487 55.000 0.00 0.00 0.00 4.04
2887 2948 2.224769 TGGAAGGGAGAATGTGAACACC 60.225 50.000 2.46 0.00 0.00 4.16
2928 2994 9.034544 CACGAACAGATATAACAATTCAGATGA 57.965 33.333 0.00 0.00 0.00 2.92
2939 3005 5.388890 GCTATGCTGCACGAACAGATATAAC 60.389 44.000 3.57 3.89 40.25 1.89
3035 3103 4.308458 CGGGTGGACTGCCGAACA 62.308 66.667 0.00 0.00 36.79 3.18
3042 3110 4.742201 CACGGAGCGGGTGGACTG 62.742 72.222 0.00 0.00 0.00 3.51
3043 3111 4.988716 TCACGGAGCGGGTGGACT 62.989 66.667 5.26 0.00 36.09 3.85
3044 3112 2.999739 TTTTCACGGAGCGGGTGGAC 63.000 60.000 5.26 0.00 36.09 4.02
3045 3113 2.119484 ATTTTCACGGAGCGGGTGGA 62.119 55.000 5.26 0.00 36.09 4.02
3046 3114 1.241315 AATTTTCACGGAGCGGGTGG 61.241 55.000 5.26 0.00 36.09 4.61
3047 3115 1.444836 TAATTTTCACGGAGCGGGTG 58.555 50.000 0.00 0.00 36.74 4.61
3048 3116 2.081462 CTTAATTTTCACGGAGCGGGT 58.919 47.619 0.00 0.00 0.00 5.28
3049 3117 2.352388 TCTTAATTTTCACGGAGCGGG 58.648 47.619 0.00 0.00 0.00 6.13
3050 3118 4.332819 AGATTCTTAATTTTCACGGAGCGG 59.667 41.667 0.00 0.00 0.00 5.52
3051 3119 5.292101 AGAGATTCTTAATTTTCACGGAGCG 59.708 40.000 0.00 0.00 0.00 5.03
3052 3120 6.457528 CCAGAGATTCTTAATTTTCACGGAGC 60.458 42.308 0.00 0.00 0.00 4.70
3053 3121 6.818644 TCCAGAGATTCTTAATTTTCACGGAG 59.181 38.462 0.00 0.00 0.00 4.63
3054 3122 6.707290 TCCAGAGATTCTTAATTTTCACGGA 58.293 36.000 0.00 0.00 0.00 4.69
3055 3123 6.595716 ACTCCAGAGATTCTTAATTTTCACGG 59.404 38.462 0.70 0.00 0.00 4.94
3056 3124 7.602517 ACTCCAGAGATTCTTAATTTTCACG 57.397 36.000 0.70 0.00 0.00 4.35
3057 3125 8.884726 GGTACTCCAGAGATTCTTAATTTTCAC 58.115 37.037 0.70 0.00 0.00 3.18
3058 3126 8.826765 AGGTACTCCAGAGATTCTTAATTTTCA 58.173 33.333 0.70 0.00 35.89 2.69
3059 3127 9.674068 AAGGTACTCCAGAGATTCTTAATTTTC 57.326 33.333 0.70 0.00 38.49 2.29
3061 3129 9.674068 GAAAGGTACTCCAGAGATTCTTAATTT 57.326 33.333 0.70 0.00 38.49 1.82
3062 3130 8.268605 GGAAAGGTACTCCAGAGATTCTTAATT 58.731 37.037 0.70 0.00 38.49 1.40
3063 3131 7.418025 CGGAAAGGTACTCCAGAGATTCTTAAT 60.418 40.741 0.70 0.00 38.49 1.40
3064 3132 6.127423 CGGAAAGGTACTCCAGAGATTCTTAA 60.127 42.308 0.70 0.00 38.49 1.85
3065 3133 5.360144 CGGAAAGGTACTCCAGAGATTCTTA 59.640 44.000 0.70 0.00 38.49 2.10
3066 3134 4.160626 CGGAAAGGTACTCCAGAGATTCTT 59.839 45.833 0.70 0.00 38.49 2.52
3067 3135 3.702045 CGGAAAGGTACTCCAGAGATTCT 59.298 47.826 0.70 0.00 38.49 2.40
3068 3136 3.738590 GCGGAAAGGTACTCCAGAGATTC 60.739 52.174 0.70 0.00 38.49 2.52
3069 3137 2.168728 GCGGAAAGGTACTCCAGAGATT 59.831 50.000 0.70 0.00 38.49 2.40
3070 3138 1.757699 GCGGAAAGGTACTCCAGAGAT 59.242 52.381 0.70 0.00 38.49 2.75
3071 3139 1.183549 GCGGAAAGGTACTCCAGAGA 58.816 55.000 0.70 0.00 38.49 3.10
3072 3140 1.135333 GAGCGGAAAGGTACTCCAGAG 59.865 57.143 1.04 0.00 38.49 3.35
3073 3141 1.183549 GAGCGGAAAGGTACTCCAGA 58.816 55.000 1.04 0.00 38.49 3.86
3074 3142 0.179134 CGAGCGGAAAGGTACTCCAG 60.179 60.000 1.04 0.00 38.49 3.86
3075 3143 1.888018 CGAGCGGAAAGGTACTCCA 59.112 57.895 1.04 0.00 38.49 3.86
3076 3144 1.518792 GCGAGCGGAAAGGTACTCC 60.519 63.158 0.00 0.00 38.49 3.85
3077 3145 0.525882 GAGCGAGCGGAAAGGTACTC 60.526 60.000 0.00 0.00 38.49 2.59
3079 3147 1.518792 GGAGCGAGCGGAAAGGTAC 60.519 63.158 0.00 0.00 0.00 3.34
3080 3148 2.890371 GGAGCGAGCGGAAAGGTA 59.110 61.111 0.00 0.00 0.00 3.08
3081 3149 4.436998 CGGAGCGAGCGGAAAGGT 62.437 66.667 0.00 0.00 0.00 3.50
3094 3162 6.543736 GGAATTCTAGTTAAAAAGTGCGGAG 58.456 40.000 5.23 0.00 0.00 4.63
3095 3163 5.121142 CGGAATTCTAGTTAAAAAGTGCGGA 59.879 40.000 5.23 0.00 30.11 5.54
3096 3164 5.106830 ACGGAATTCTAGTTAAAAAGTGCGG 60.107 40.000 5.23 0.00 36.39 5.69
3097 3165 5.923665 ACGGAATTCTAGTTAAAAAGTGCG 58.076 37.500 5.23 1.95 37.72 5.34
3098 3166 6.894828 TGACGGAATTCTAGTTAAAAAGTGC 58.105 36.000 5.23 0.00 0.00 4.40
3099 3167 7.015877 GCTGACGGAATTCTAGTTAAAAAGTG 58.984 38.462 5.23 0.00 0.00 3.16
3100 3168 6.935208 AGCTGACGGAATTCTAGTTAAAAAGT 59.065 34.615 5.23 0.00 0.00 2.66
3101 3169 7.365840 AGCTGACGGAATTCTAGTTAAAAAG 57.634 36.000 5.23 2.92 0.00 2.27
3102 3170 6.370718 GGAGCTGACGGAATTCTAGTTAAAAA 59.629 38.462 5.23 0.00 0.00 1.94
3103 3171 5.873164 GGAGCTGACGGAATTCTAGTTAAAA 59.127 40.000 5.23 0.00 0.00 1.52
3104 3172 5.416947 GGAGCTGACGGAATTCTAGTTAAA 58.583 41.667 5.23 0.00 0.00 1.52
3105 3173 4.439700 CGGAGCTGACGGAATTCTAGTTAA 60.440 45.833 5.23 0.00 0.00 2.01
3106 3174 3.066342 CGGAGCTGACGGAATTCTAGTTA 59.934 47.826 5.23 2.62 0.00 2.24
3107 3175 2.159226 CGGAGCTGACGGAATTCTAGTT 60.159 50.000 5.23 0.00 0.00 2.24
3108 3176 1.405821 CGGAGCTGACGGAATTCTAGT 59.594 52.381 5.23 6.13 0.00 2.57
3109 3177 2.126914 CGGAGCTGACGGAATTCTAG 57.873 55.000 5.23 2.79 0.00 2.43
3147 3215 3.020237 GCCTGTTCGGAGTCCCTCC 62.020 68.421 2.80 0.00 46.44 4.30
3148 3216 2.579738 GCCTGTTCGGAGTCCCTC 59.420 66.667 2.80 0.00 33.16 4.30
3149 3217 3.003763 GGCCTGTTCGGAGTCCCT 61.004 66.667 2.80 0.00 33.16 4.20
3150 3218 1.262640 TAAGGCCTGTTCGGAGTCCC 61.263 60.000 5.69 0.00 33.16 4.46
3151 3219 0.611714 TTAAGGCCTGTTCGGAGTCC 59.388 55.000 5.69 0.00 33.16 3.85
3152 3220 1.275573 ACTTAAGGCCTGTTCGGAGTC 59.724 52.381 5.69 0.00 33.16 3.36
3153 3221 1.349067 ACTTAAGGCCTGTTCGGAGT 58.651 50.000 5.69 1.29 33.16 3.85
3154 3222 3.821421 ATACTTAAGGCCTGTTCGGAG 57.179 47.619 5.69 0.60 33.16 4.63
3155 3223 4.467082 TGTTATACTTAAGGCCTGTTCGGA 59.533 41.667 5.69 0.00 33.16 4.55
3156 3224 4.569564 GTGTTATACTTAAGGCCTGTTCGG 59.430 45.833 5.69 0.00 0.00 4.30
3157 3225 5.416947 AGTGTTATACTTAAGGCCTGTTCG 58.583 41.667 5.69 0.00 35.67 3.95
3182 3250 4.946478 AATGAATAGAGGAGAAGGGACG 57.054 45.455 0.00 0.00 0.00 4.79
3195 3263 3.106827 AGGGCCCCACAAAAATGAATAG 58.893 45.455 21.43 0.00 0.00 1.73
3201 3269 1.644509 GAGAAGGGCCCCACAAAAAT 58.355 50.000 21.43 0.00 0.00 1.82
3208 3276 0.346932 AATAGAGGAGAAGGGCCCCA 59.653 55.000 21.43 0.00 0.00 4.96
3244 3312 1.468506 TAGCAGGGACACAACGAGCA 61.469 55.000 0.00 0.00 0.00 4.26
3299 3367 4.279922 CGTCCATACAGGTGACCATGTATA 59.720 45.833 19.29 8.51 39.91 1.47
3312 3380 2.666508 CCGTCTTCAAACGTCCATACAG 59.333 50.000 0.00 0.00 41.01 2.74


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.