Multiple sequence alignment - TraesCS5B01G350400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G350400 chr5B 100.000 4067 0 0 451 4517 531219321 531223387 0.000000e+00 7511
1 TraesCS5B01G350400 chr5B 86.559 1049 99 23 2266 3302 531299097 531300115 0.000000e+00 1118
2 TraesCS5B01G350400 chr5B 85.917 774 84 15 1383 2152 531298262 531299014 0.000000e+00 802
3 TraesCS5B01G350400 chr5B 80.878 706 87 23 3320 3998 531300101 531300785 3.120000e-141 512
4 TraesCS5B01G350400 chr5B 88.889 243 15 5 1077 1319 531294963 531295193 5.720000e-74 289
5 TraesCS5B01G350400 chr5B 100.000 121 0 0 1 121 531218871 531218991 1.640000e-54 224
6 TraesCS5B01G350400 chr5A 94.752 2363 102 8 944 3304 552314168 552316510 0.000000e+00 3657
7 TraesCS5B01G350400 chr5A 90.159 945 74 8 3320 4256 552316494 552317427 0.000000e+00 1212
8 TraesCS5B01G350400 chr5A 89.557 948 77 11 3320 4255 552355219 552356156 0.000000e+00 1182
9 TraesCS5B01G350400 chr5A 85.328 1036 108 29 2274 3294 552375664 552376670 0.000000e+00 1031
10 TraesCS5B01G350400 chr5A 83.349 1051 120 29 2268 3305 315334506 315335514 0.000000e+00 920
11 TraesCS5B01G350400 chr5A 86.859 799 87 13 1376 2160 315333685 315334479 0.000000e+00 878
12 TraesCS5B01G350400 chr5A 86.358 799 83 19 1364 2160 552374815 552375589 0.000000e+00 848
13 TraesCS5B01G350400 chr5A 79.694 719 105 22 3321 4011 552376665 552377370 8.790000e-132 481
14 TraesCS5B01G350400 chr5A 86.392 316 24 3 1017 1319 552372215 552372524 1.210000e-85 327
15 TraesCS5B01G350400 chr5A 93.846 195 12 0 1077 1271 315332765 315332959 1.230000e-75 294
16 TraesCS5B01G350400 chr5A 98.667 75 1 0 3224 3298 552355155 552355229 2.830000e-27 134
17 TraesCS5B01G350400 chr5D 93.921 2336 107 11 649 2972 437038502 437040814 0.000000e+00 3494
18 TraesCS5B01G350400 chr5D 84.586 1038 114 31 2274 3294 437065936 437066944 0.000000e+00 989
19 TraesCS5B01G350400 chr5D 83.491 1054 116 31 2268 3305 238779508 238778497 0.000000e+00 929
20 TraesCS5B01G350400 chr5D 87.028 794 82 14 1383 2160 238780321 238779533 0.000000e+00 876
21 TraesCS5B01G350400 chr5D 86.923 780 81 15 1383 2160 437065101 437065861 0.000000e+00 856
22 TraesCS5B01G350400 chr5D 87.077 325 40 2 3932 4256 437046444 437046766 2.570000e-97 366
23 TraesCS5B01G350400 chr5D 83.901 323 43 7 3390 3712 238778471 238778158 2.640000e-77 300
24 TraesCS5B01G350400 chr5D 93.846 195 12 0 1077 1271 238783327 238783133 1.230000e-75 294
25 TraesCS5B01G350400 chr5D 93.878 196 11 1 1076 1270 437063263 437063458 1.230000e-75 294
26 TraesCS5B01G350400 chr5D 87.405 262 17 7 3704 3958 437046175 437046427 2.060000e-73 287
27 TraesCS5B01G350400 chr5D 85.252 278 31 5 3321 3590 437066939 437067214 1.240000e-70 278
28 TraesCS5B01G350400 chr5D 90.710 183 16 1 4074 4256 437041850 437042031 4.510000e-60 243
29 TraesCS5B01G350400 chr5D 86.207 145 12 2 451 593 437038366 437038504 2.810000e-32 150
30 TraesCS5B01G350400 chr5D 85.039 127 13 2 3776 3902 238777993 238777873 1.710000e-24 124
31 TraesCS5B01G350400 chr5D 98.462 65 1 0 2985 3049 437040892 437040828 1.030000e-21 115
32 TraesCS5B01G350400 chr4B 81.579 266 43 4 2498 2760 168184825 168185087 9.840000e-52 215
33 TraesCS5B01G350400 chr4D 86.224 196 27 0 1077 1272 108218830 108218635 3.540000e-51 213


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G350400 chr5B 531218871 531223387 4516 False 3867.500000 7511 100.000000 1 4517 2 chr5B.!!$F1 4516
1 TraesCS5B01G350400 chr5B 531294963 531300785 5822 False 680.250000 1118 85.560750 1077 3998 4 chr5B.!!$F2 2921
2 TraesCS5B01G350400 chr5A 552314168 552317427 3259 False 2434.500000 3657 92.455500 944 4256 2 chr5A.!!$F2 3312
3 TraesCS5B01G350400 chr5A 315332765 315335514 2749 False 697.333333 920 88.018000 1077 3305 3 chr5A.!!$F1 2228
4 TraesCS5B01G350400 chr5A 552372215 552377370 5155 False 671.750000 1031 84.443000 1017 4011 4 chr5A.!!$F4 2994
5 TraesCS5B01G350400 chr5A 552355155 552356156 1001 False 658.000000 1182 94.112000 3224 4255 2 chr5A.!!$F3 1031
6 TraesCS5B01G350400 chr5D 437038366 437042031 3665 False 1295.666667 3494 90.279333 451 4256 3 chr5D.!!$F1 3805
7 TraesCS5B01G350400 chr5D 437063263 437067214 3951 False 604.250000 989 87.659750 1076 3590 4 chr5D.!!$F3 2514
8 TraesCS5B01G350400 chr5D 238777873 238783327 5454 True 504.600000 929 86.661000 1077 3902 5 chr5D.!!$R2 2825
9 TraesCS5B01G350400 chr5D 437046175 437046766 591 False 326.500000 366 87.241000 3704 4256 2 chr5D.!!$F2 552

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
608 611 0.036388 GTGAGCTTGGTCGGATTGGA 60.036 55.0 0.00 0.00 0.00 3.53 F
1109 1118 0.037232 CTGTTGGAGGAGAACCGGAC 60.037 60.0 9.46 0.99 41.83 4.79 F
1661 7705 0.909133 TCCAGATGTACCTGCAGGCA 60.909 55.0 33.06 23.16 39.32 4.75 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1787 7831 0.405198 ACACAGGAATCCACATGGCA 59.595 50.000 0.61 0.0 34.44 4.92 R
2685 8799 1.227118 GGCTAGAAGAGGCGACAGC 60.227 63.158 0.00 0.0 41.55 4.40 R
3579 10151 0.589223 TAAAACGCCGCAAACTCTGG 59.411 50.000 0.00 0.0 0.00 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.516780 TCCCCTGGAGGTAGTCGT 58.483 61.111 0.00 0.00 0.00 4.34
18 19 1.305623 TCCCCTGGAGGTAGTCGTC 59.694 63.158 0.00 0.00 0.00 4.20
19 20 1.212934 TCCCCTGGAGGTAGTCGTCT 61.213 60.000 0.00 0.00 0.00 4.18
20 21 0.752376 CCCCTGGAGGTAGTCGTCTC 60.752 65.000 0.00 0.00 0.00 3.36
21 22 1.096386 CCCTGGAGGTAGTCGTCTCG 61.096 65.000 0.00 0.00 0.00 4.04
22 23 0.392729 CCTGGAGGTAGTCGTCTCGT 60.393 60.000 0.00 0.00 0.00 4.18
23 24 1.008329 CTGGAGGTAGTCGTCTCGTC 58.992 60.000 0.00 0.00 0.00 4.20
24 25 0.738762 TGGAGGTAGTCGTCTCGTCG 60.739 60.000 0.00 0.00 0.00 5.12
25 26 0.459237 GGAGGTAGTCGTCTCGTCGA 60.459 60.000 0.00 0.00 37.51 4.20
26 27 1.569708 GAGGTAGTCGTCTCGTCGAT 58.430 55.000 0.00 0.00 41.78 3.59
27 28 1.258458 GAGGTAGTCGTCTCGTCGATG 59.742 57.143 0.00 0.00 41.78 3.84
28 29 0.316032 GGTAGTCGTCTCGTCGATGC 60.316 60.000 0.00 0.00 41.78 3.91
29 30 0.651042 GTAGTCGTCTCGTCGATGCG 60.651 60.000 10.94 10.94 41.78 4.73
30 31 2.357424 TAGTCGTCTCGTCGATGCGC 62.357 60.000 0.00 0.00 41.78 6.09
31 32 3.497031 TCGTCTCGTCGATGCGCT 61.497 61.111 9.73 0.00 34.85 5.92
32 33 3.013990 CGTCTCGTCGATGCGCTC 61.014 66.667 9.73 2.56 0.00 5.03
33 34 2.100410 GTCTCGTCGATGCGCTCA 59.900 61.111 9.73 0.00 0.00 4.26
34 35 1.936880 GTCTCGTCGATGCGCTCAG 60.937 63.158 9.73 0.00 0.00 3.35
35 36 2.653448 CTCGTCGATGCGCTCAGG 60.653 66.667 9.73 0.00 0.00 3.86
36 37 3.402691 CTCGTCGATGCGCTCAGGT 62.403 63.158 9.73 0.00 0.00 4.00
37 38 3.250323 CGTCGATGCGCTCAGGTG 61.250 66.667 9.73 0.00 0.00 4.00
38 39 2.125912 GTCGATGCGCTCAGGTGT 60.126 61.111 9.73 0.00 0.00 4.16
39 40 1.738099 GTCGATGCGCTCAGGTGTT 60.738 57.895 9.73 0.00 0.00 3.32
40 41 1.446099 TCGATGCGCTCAGGTGTTC 60.446 57.895 9.73 0.00 0.00 3.18
41 42 2.792290 CGATGCGCTCAGGTGTTCG 61.792 63.158 9.73 0.81 0.00 3.95
42 43 1.738099 GATGCGCTCAGGTGTTCGT 60.738 57.895 9.73 0.00 0.00 3.85
43 44 1.687494 GATGCGCTCAGGTGTTCGTC 61.687 60.000 9.73 0.00 0.00 4.20
44 45 3.112709 GCGCTCAGGTGTTCGTCC 61.113 66.667 0.00 0.00 0.00 4.79
45 46 2.651361 CGCTCAGGTGTTCGTCCT 59.349 61.111 0.00 0.00 35.45 3.85
46 47 1.006102 CGCTCAGGTGTTCGTCCTT 60.006 57.895 0.00 0.00 32.37 3.36
47 48 0.600255 CGCTCAGGTGTTCGTCCTTT 60.600 55.000 0.00 0.00 32.37 3.11
48 49 0.868406 GCTCAGGTGTTCGTCCTTTG 59.132 55.000 0.00 0.00 32.37 2.77
49 50 0.868406 CTCAGGTGTTCGTCCTTTGC 59.132 55.000 0.00 0.00 32.37 3.68
50 51 0.179234 TCAGGTGTTCGTCCTTTGCA 59.821 50.000 0.00 0.00 32.37 4.08
51 52 1.021202 CAGGTGTTCGTCCTTTGCAA 58.979 50.000 0.00 0.00 32.37 4.08
52 53 1.002468 CAGGTGTTCGTCCTTTGCAAG 60.002 52.381 0.00 0.00 32.37 4.01
53 54 1.021968 GGTGTTCGTCCTTTGCAAGT 58.978 50.000 0.00 0.00 0.00 3.16
54 55 1.002792 GGTGTTCGTCCTTTGCAAGTC 60.003 52.381 0.00 0.00 0.00 3.01
55 56 1.940613 GTGTTCGTCCTTTGCAAGTCT 59.059 47.619 0.00 0.00 0.00 3.24
56 57 2.032808 GTGTTCGTCCTTTGCAAGTCTC 60.033 50.000 0.00 0.00 0.00 3.36
57 58 2.210116 GTTCGTCCTTTGCAAGTCTCA 58.790 47.619 0.00 0.00 0.00 3.27
58 59 2.808543 GTTCGTCCTTTGCAAGTCTCAT 59.191 45.455 0.00 0.00 0.00 2.90
59 60 3.953712 TCGTCCTTTGCAAGTCTCATA 57.046 42.857 0.00 0.00 0.00 2.15
60 61 3.849911 TCGTCCTTTGCAAGTCTCATAG 58.150 45.455 0.00 0.00 0.00 2.23
61 62 2.349886 CGTCCTTTGCAAGTCTCATAGC 59.650 50.000 0.00 0.00 0.00 2.97
62 63 2.349886 GTCCTTTGCAAGTCTCATAGCG 59.650 50.000 0.00 0.00 0.00 4.26
63 64 1.667724 CCTTTGCAAGTCTCATAGCGG 59.332 52.381 0.00 0.00 0.00 5.52
64 65 2.350522 CTTTGCAAGTCTCATAGCGGT 58.649 47.619 0.00 0.00 0.00 5.68
65 66 1.725641 TTGCAAGTCTCATAGCGGTG 58.274 50.000 0.00 0.00 0.00 4.94
66 67 0.894835 TGCAAGTCTCATAGCGGTGA 59.105 50.000 0.00 0.00 0.00 4.02
67 68 1.275010 TGCAAGTCTCATAGCGGTGAA 59.725 47.619 0.00 0.00 0.00 3.18
68 69 1.661112 GCAAGTCTCATAGCGGTGAAC 59.339 52.381 0.00 0.00 0.00 3.18
69 70 2.675317 GCAAGTCTCATAGCGGTGAACT 60.675 50.000 0.00 0.00 0.00 3.01
70 71 2.926200 CAAGTCTCATAGCGGTGAACTG 59.074 50.000 0.00 0.00 0.00 3.16
71 72 1.478510 AGTCTCATAGCGGTGAACTGG 59.521 52.381 0.00 0.00 0.00 4.00
72 73 1.204941 GTCTCATAGCGGTGAACTGGT 59.795 52.381 0.00 0.00 36.79 4.00
73 74 1.204704 TCTCATAGCGGTGAACTGGTG 59.795 52.381 0.00 0.00 34.41 4.17
74 75 1.204704 CTCATAGCGGTGAACTGGTGA 59.795 52.381 0.00 0.00 34.41 4.02
75 76 1.831106 TCATAGCGGTGAACTGGTGAT 59.169 47.619 0.00 0.00 34.41 3.06
76 77 2.159099 TCATAGCGGTGAACTGGTGATC 60.159 50.000 0.00 0.00 34.41 2.92
77 78 1.557099 TAGCGGTGAACTGGTGATCT 58.443 50.000 0.00 0.00 34.41 2.75
78 79 0.036952 AGCGGTGAACTGGTGATCTG 60.037 55.000 0.00 0.00 0.00 2.90
79 80 1.021390 GCGGTGAACTGGTGATCTGG 61.021 60.000 0.00 0.00 0.00 3.86
80 81 0.321671 CGGTGAACTGGTGATCTGGT 59.678 55.000 0.00 0.00 0.00 4.00
81 82 1.548719 CGGTGAACTGGTGATCTGGTA 59.451 52.381 0.00 0.00 0.00 3.25
82 83 2.674177 CGGTGAACTGGTGATCTGGTAC 60.674 54.545 0.00 0.00 0.00 3.34
83 84 2.567615 GGTGAACTGGTGATCTGGTACT 59.432 50.000 0.00 0.00 0.00 2.73
84 85 3.589988 GTGAACTGGTGATCTGGTACTG 58.410 50.000 0.00 0.00 0.00 2.74
85 86 3.006967 GTGAACTGGTGATCTGGTACTGT 59.993 47.826 0.00 0.00 0.00 3.55
86 87 3.646162 TGAACTGGTGATCTGGTACTGTT 59.354 43.478 0.00 0.00 0.00 3.16
87 88 4.836175 TGAACTGGTGATCTGGTACTGTTA 59.164 41.667 0.00 0.00 0.00 2.41
88 89 5.047306 TGAACTGGTGATCTGGTACTGTTAG 60.047 44.000 0.00 0.00 0.00 2.34
89 90 4.417437 ACTGGTGATCTGGTACTGTTAGT 58.583 43.478 0.00 0.00 0.00 2.24
90 91 4.220821 ACTGGTGATCTGGTACTGTTAGTG 59.779 45.833 0.00 0.00 0.00 2.74
91 92 3.513912 TGGTGATCTGGTACTGTTAGTGG 59.486 47.826 0.00 0.00 0.00 4.00
92 93 3.118738 GGTGATCTGGTACTGTTAGTGGG 60.119 52.174 0.00 0.00 0.00 4.61
93 94 3.514309 GTGATCTGGTACTGTTAGTGGGT 59.486 47.826 0.00 0.00 0.00 4.51
94 95 3.513912 TGATCTGGTACTGTTAGTGGGTG 59.486 47.826 0.00 0.00 0.00 4.61
95 96 2.253610 TCTGGTACTGTTAGTGGGTGG 58.746 52.381 0.00 0.00 0.00 4.61
96 97 1.975680 CTGGTACTGTTAGTGGGTGGT 59.024 52.381 0.00 0.00 0.00 4.16
97 98 2.370849 CTGGTACTGTTAGTGGGTGGTT 59.629 50.000 0.00 0.00 0.00 3.67
98 99 2.778850 TGGTACTGTTAGTGGGTGGTTT 59.221 45.455 0.00 0.00 0.00 3.27
99 100 3.202595 TGGTACTGTTAGTGGGTGGTTTT 59.797 43.478 0.00 0.00 0.00 2.43
100 101 4.209538 GGTACTGTTAGTGGGTGGTTTTT 58.790 43.478 0.00 0.00 0.00 1.94
101 102 4.037089 GGTACTGTTAGTGGGTGGTTTTTG 59.963 45.833 0.00 0.00 0.00 2.44
102 103 3.028130 ACTGTTAGTGGGTGGTTTTTGG 58.972 45.455 0.00 0.00 0.00 3.28
103 104 3.028130 CTGTTAGTGGGTGGTTTTTGGT 58.972 45.455 0.00 0.00 0.00 3.67
104 105 3.442076 TGTTAGTGGGTGGTTTTTGGTT 58.558 40.909 0.00 0.00 0.00 3.67
105 106 3.195825 TGTTAGTGGGTGGTTTTTGGTTG 59.804 43.478 0.00 0.00 0.00 3.77
106 107 1.945580 AGTGGGTGGTTTTTGGTTGT 58.054 45.000 0.00 0.00 0.00 3.32
107 108 2.261729 AGTGGGTGGTTTTTGGTTGTT 58.738 42.857 0.00 0.00 0.00 2.83
108 109 2.235155 AGTGGGTGGTTTTTGGTTGTTC 59.765 45.455 0.00 0.00 0.00 3.18
109 110 2.235155 GTGGGTGGTTTTTGGTTGTTCT 59.765 45.455 0.00 0.00 0.00 3.01
110 111 2.907042 TGGGTGGTTTTTGGTTGTTCTT 59.093 40.909 0.00 0.00 0.00 2.52
111 112 3.266636 GGGTGGTTTTTGGTTGTTCTTG 58.733 45.455 0.00 0.00 0.00 3.02
112 113 3.307129 GGGTGGTTTTTGGTTGTTCTTGT 60.307 43.478 0.00 0.00 0.00 3.16
113 114 3.930229 GGTGGTTTTTGGTTGTTCTTGTC 59.070 43.478 0.00 0.00 0.00 3.18
114 115 3.610677 GTGGTTTTTGGTTGTTCTTGTCG 59.389 43.478 0.00 0.00 0.00 4.35
115 116 3.256136 TGGTTTTTGGTTGTTCTTGTCGT 59.744 39.130 0.00 0.00 0.00 4.34
116 117 4.239304 GGTTTTTGGTTGTTCTTGTCGTT 58.761 39.130 0.00 0.00 0.00 3.85
117 118 4.090786 GGTTTTTGGTTGTTCTTGTCGTTG 59.909 41.667 0.00 0.00 0.00 4.10
118 119 4.506886 TTTTGGTTGTTCTTGTCGTTGT 57.493 36.364 0.00 0.00 0.00 3.32
119 120 4.506886 TTTGGTTGTTCTTGTCGTTGTT 57.493 36.364 0.00 0.00 0.00 2.83
120 121 4.506886 TTGGTTGTTCTTGTCGTTGTTT 57.493 36.364 0.00 0.00 0.00 2.83
485 488 5.012893 AGTGCCCTTTCTCTAAAAATGGAG 58.987 41.667 0.00 0.00 0.00 3.86
486 489 5.010282 GTGCCCTTTCTCTAAAAATGGAGA 58.990 41.667 0.00 0.00 36.89 3.71
513 516 2.761208 ACAGAAGATAGAACCCGGTGAG 59.239 50.000 0.00 0.00 0.00 3.51
515 518 0.831307 AAGATAGAACCCGGTGAGGC 59.169 55.000 0.00 0.00 39.21 4.70
547 550 5.046304 ACATAGATGCGTATGGGAGCTAATT 60.046 40.000 0.00 0.00 38.50 1.40
556 559 1.570501 TGGGAGCTAATTGCCTGGATT 59.429 47.619 0.00 0.00 44.23 3.01
557 560 2.782925 TGGGAGCTAATTGCCTGGATTA 59.217 45.455 0.00 0.00 44.23 1.75
558 561 3.398967 TGGGAGCTAATTGCCTGGATTAT 59.601 43.478 0.00 0.00 44.23 1.28
559 562 4.601420 TGGGAGCTAATTGCCTGGATTATA 59.399 41.667 0.00 0.00 44.23 0.98
560 563 5.253798 TGGGAGCTAATTGCCTGGATTATAT 59.746 40.000 0.00 0.00 44.23 0.86
561 564 6.446759 TGGGAGCTAATTGCCTGGATTATATA 59.553 38.462 0.00 0.00 44.23 0.86
594 597 6.702716 ACTCCTATAGTTCTACTTGTGAGC 57.297 41.667 0.00 0.00 33.35 4.26
595 598 6.428295 ACTCCTATAGTTCTACTTGTGAGCT 58.572 40.000 0.00 0.00 33.35 4.09
596 599 6.893005 ACTCCTATAGTTCTACTTGTGAGCTT 59.107 38.462 0.00 0.00 33.35 3.74
597 600 7.101652 TCCTATAGTTCTACTTGTGAGCTTG 57.898 40.000 0.00 0.00 0.00 4.01
598 601 6.096987 TCCTATAGTTCTACTTGTGAGCTTGG 59.903 42.308 0.00 0.00 0.00 3.61
599 602 5.746990 ATAGTTCTACTTGTGAGCTTGGT 57.253 39.130 0.00 0.00 0.00 3.67
600 603 3.996480 AGTTCTACTTGTGAGCTTGGTC 58.004 45.455 0.00 0.00 0.00 4.02
601 604 2.724977 TCTACTTGTGAGCTTGGTCG 57.275 50.000 0.00 0.00 0.00 4.79
602 605 1.272490 TCTACTTGTGAGCTTGGTCGG 59.728 52.381 0.00 0.00 0.00 4.79
603 606 1.272490 CTACTTGTGAGCTTGGTCGGA 59.728 52.381 0.00 0.00 0.00 4.55
604 607 0.687354 ACTTGTGAGCTTGGTCGGAT 59.313 50.000 0.00 0.00 0.00 4.18
605 608 1.072331 ACTTGTGAGCTTGGTCGGATT 59.928 47.619 0.00 0.00 0.00 3.01
606 609 1.466167 CTTGTGAGCTTGGTCGGATTG 59.534 52.381 0.00 0.00 0.00 2.67
607 610 0.321564 TGTGAGCTTGGTCGGATTGG 60.322 55.000 0.00 0.00 0.00 3.16
608 611 0.036388 GTGAGCTTGGTCGGATTGGA 60.036 55.000 0.00 0.00 0.00 3.53
609 612 0.911769 TGAGCTTGGTCGGATTGGAT 59.088 50.000 0.00 0.00 0.00 3.41
610 613 1.281867 TGAGCTTGGTCGGATTGGATT 59.718 47.619 0.00 0.00 0.00 3.01
611 614 2.503765 TGAGCTTGGTCGGATTGGATTA 59.496 45.455 0.00 0.00 0.00 1.75
612 615 3.136443 TGAGCTTGGTCGGATTGGATTAT 59.864 43.478 0.00 0.00 0.00 1.28
613 616 4.346709 TGAGCTTGGTCGGATTGGATTATA 59.653 41.667 0.00 0.00 0.00 0.98
614 617 4.899502 AGCTTGGTCGGATTGGATTATAG 58.100 43.478 0.00 0.00 0.00 1.31
615 618 4.003648 GCTTGGTCGGATTGGATTATAGG 58.996 47.826 0.00 0.00 0.00 2.57
616 619 4.262894 GCTTGGTCGGATTGGATTATAGGA 60.263 45.833 0.00 0.00 0.00 2.94
617 620 5.482908 CTTGGTCGGATTGGATTATAGGAG 58.517 45.833 0.00 0.00 0.00 3.69
618 621 4.489737 TGGTCGGATTGGATTATAGGAGT 58.510 43.478 0.00 0.00 0.00 3.85
619 622 4.283467 TGGTCGGATTGGATTATAGGAGTG 59.717 45.833 0.00 0.00 0.00 3.51
620 623 4.322801 GGTCGGATTGGATTATAGGAGTGG 60.323 50.000 0.00 0.00 0.00 4.00
621 624 4.283722 GTCGGATTGGATTATAGGAGTGGT 59.716 45.833 0.00 0.00 0.00 4.16
622 625 5.479375 GTCGGATTGGATTATAGGAGTGGTA 59.521 44.000 0.00 0.00 0.00 3.25
623 626 5.479375 TCGGATTGGATTATAGGAGTGGTAC 59.521 44.000 0.00 0.00 0.00 3.34
624 627 5.245301 CGGATTGGATTATAGGAGTGGTACA 59.755 44.000 0.00 0.00 0.00 2.90
625 628 6.070767 CGGATTGGATTATAGGAGTGGTACAT 60.071 42.308 0.00 0.00 44.52 2.29
626 629 7.527196 CGGATTGGATTATAGGAGTGGTACATT 60.527 40.741 0.00 0.00 44.52 2.71
627 630 8.822805 GGATTGGATTATAGGAGTGGTACATTA 58.177 37.037 0.00 0.00 44.52 1.90
638 641 8.653036 AGGAGTGGTACATTATACTCTATTCC 57.347 38.462 0.00 0.00 44.52 3.01
639 642 7.674772 AGGAGTGGTACATTATACTCTATTCCC 59.325 40.741 0.00 0.00 44.52 3.97
640 643 7.674772 GGAGTGGTACATTATACTCTATTCCCT 59.325 40.741 0.00 0.00 44.52 4.20
641 644 8.423906 AGTGGTACATTATACTCTATTCCCTG 57.576 38.462 0.00 0.00 44.52 4.45
642 645 7.455008 AGTGGTACATTATACTCTATTCCCTGG 59.545 40.741 0.00 0.00 44.52 4.45
643 646 7.453752 GTGGTACATTATACTCTATTCCCTGGA 59.546 40.741 0.00 0.00 44.52 3.86
644 647 8.184249 TGGTACATTATACTCTATTCCCTGGAT 58.816 37.037 0.00 0.00 0.00 3.41
645 648 8.697292 GGTACATTATACTCTATTCCCTGGATC 58.303 40.741 0.00 0.00 0.00 3.36
646 649 9.482175 GTACATTATACTCTATTCCCTGGATCT 57.518 37.037 0.00 0.00 0.00 2.75
647 650 8.602472 ACATTATACTCTATTCCCTGGATCTC 57.398 38.462 0.00 0.00 0.00 2.75
722 728 6.373186 AAAGCTTTTGATATAAGTACGGCC 57.627 37.500 5.69 0.00 0.00 6.13
741 747 4.439563 CGGCCAATTAATAACTGTTGGGAC 60.440 45.833 2.24 0.00 41.05 4.46
782 788 7.584108 CAGATAGATCGATGCATCCTATCTAC 58.416 42.308 31.89 26.05 34.14 2.59
783 789 7.445096 CAGATAGATCGATGCATCCTATCTACT 59.555 40.741 31.89 27.04 34.14 2.57
784 790 8.655901 AGATAGATCGATGCATCCTATCTACTA 58.344 37.037 31.68 21.03 34.14 1.82
803 809 1.026584 ACCTTGTTTAACCGGTGTGC 58.973 50.000 8.52 0.00 0.00 4.57
805 811 1.679153 CCTTGTTTAACCGGTGTGCTT 59.321 47.619 8.52 0.00 0.00 3.91
806 812 2.879646 CCTTGTTTAACCGGTGTGCTTA 59.120 45.455 8.52 0.00 0.00 3.09
807 813 3.304190 CCTTGTTTAACCGGTGTGCTTAC 60.304 47.826 8.52 1.52 0.00 2.34
808 814 3.196939 TGTTTAACCGGTGTGCTTACT 57.803 42.857 8.52 0.00 0.00 2.24
809 815 2.873472 TGTTTAACCGGTGTGCTTACTG 59.127 45.455 8.52 0.00 0.00 2.74
810 816 3.132925 GTTTAACCGGTGTGCTTACTGA 58.867 45.455 8.52 0.00 0.00 3.41
811 817 2.443887 TAACCGGTGTGCTTACTGAC 57.556 50.000 8.52 0.00 0.00 3.51
812 818 0.756903 AACCGGTGTGCTTACTGACT 59.243 50.000 8.52 0.00 0.00 3.41
813 819 1.624336 ACCGGTGTGCTTACTGACTA 58.376 50.000 6.12 0.00 0.00 2.59
849 855 2.941064 CAGTGACAATGCTACTCATGGG 59.059 50.000 0.00 0.00 35.13 4.00
850 856 2.573462 AGTGACAATGCTACTCATGGGT 59.427 45.455 2.45 2.45 35.13 4.51
851 857 2.939103 GTGACAATGCTACTCATGGGTC 59.061 50.000 0.00 0.00 39.15 4.46
852 858 2.571202 TGACAATGCTACTCATGGGTCA 59.429 45.455 0.00 0.00 42.75 4.02
853 859 3.200605 TGACAATGCTACTCATGGGTCAT 59.799 43.478 0.00 0.00 41.42 3.06
854 860 3.548770 ACAATGCTACTCATGGGTCATG 58.451 45.455 0.00 0.00 42.60 3.07
855 861 2.882761 CAATGCTACTCATGGGTCATGG 59.117 50.000 0.00 0.00 41.66 3.66
865 871 0.113972 TGGGTCATGGCATTCACCAA 59.886 50.000 21.51 11.74 44.65 3.67
884 890 2.110901 ACAAGCATGCTCTCTCCAAG 57.889 50.000 22.93 6.28 0.00 3.61
888 894 1.096386 GCATGCTCTCTCCAAGGCAG 61.096 60.000 11.37 0.00 35.52 4.85
908 914 1.083657 GCGTGCGTGTTAGTGTGTG 60.084 57.895 0.00 0.00 0.00 3.82
970 976 3.084039 CAAGGCAACAAGATTCTAGGCA 58.916 45.455 0.00 0.00 41.41 4.75
1109 1118 0.037232 CTGTTGGAGGAGAACCGGAC 60.037 60.000 9.46 0.99 41.83 4.79
1332 3200 1.806542 TGCCAAAGAATCGAACTGCTC 59.193 47.619 0.00 0.00 0.00 4.26
1544 7588 2.317371 TCTTCACTGAGCCTCTCCTT 57.683 50.000 0.00 0.00 0.00 3.36
1640 7684 1.871080 CCAACGTCTTCAGCTTCACT 58.129 50.000 0.00 0.00 0.00 3.41
1661 7705 0.909133 TCCAGATGTACCTGCAGGCA 60.909 55.000 33.06 23.16 39.32 4.75
1725 7769 1.021390 CGGTCTCCATGTGTTCCTGC 61.021 60.000 0.00 0.00 0.00 4.85
1886 7930 1.069765 CACAGCACTCACCGACCTT 59.930 57.895 0.00 0.00 0.00 3.50
2685 8799 4.099170 GCTGCCGCAGTTGCTGAG 62.099 66.667 21.29 0.00 39.32 3.35
2793 8907 9.964303 TTCCAAATGCATATACATTACAATCAC 57.036 29.630 0.00 0.00 39.32 3.06
2794 8908 8.575589 TCCAAATGCATATACATTACAATCACC 58.424 33.333 0.00 0.00 39.32 4.02
3292 9806 8.129211 AGCACTGAAACATTGTTAAGTAAAGTC 58.871 33.333 14.19 3.11 0.00 3.01
3293 9807 8.129211 GCACTGAAACATTGTTAAGTAAAGTCT 58.871 33.333 14.19 0.00 0.00 3.24
3294 9808 9.651718 CACTGAAACATTGTTAAGTAAAGTCTC 57.348 33.333 14.19 1.95 0.00 3.36
3295 9809 8.837389 ACTGAAACATTGTTAAGTAAAGTCTCC 58.163 33.333 13.37 0.00 0.00 3.71
3296 9810 8.740123 TGAAACATTGTTAAGTAAAGTCTCCA 57.260 30.769 1.76 0.00 0.00 3.86
3297 9811 9.349713 TGAAACATTGTTAAGTAAAGTCTCCAT 57.650 29.630 1.76 0.00 0.00 3.41
3298 9812 9.612620 GAAACATTGTTAAGTAAAGTCTCCATG 57.387 33.333 1.76 0.00 0.00 3.66
3299 9813 8.691661 AACATTGTTAAGTAAAGTCTCCATGT 57.308 30.769 0.00 0.00 0.00 3.21
3300 9814 8.099364 ACATTGTTAAGTAAAGTCTCCATGTG 57.901 34.615 0.00 0.00 0.00 3.21
3301 9815 7.719633 ACATTGTTAAGTAAAGTCTCCATGTGT 59.280 33.333 0.00 0.00 0.00 3.72
3302 9816 7.724305 TTGTTAAGTAAAGTCTCCATGTGTC 57.276 36.000 0.00 0.00 0.00 3.67
3304 9818 7.506114 TGTTAAGTAAAGTCTCCATGTGTCTT 58.494 34.615 0.00 0.00 0.00 3.01
3305 9819 7.656137 TGTTAAGTAAAGTCTCCATGTGTCTTC 59.344 37.037 0.00 0.00 0.00 2.87
3307 9821 6.426646 AGTAAAGTCTCCATGTGTCTTCTT 57.573 37.500 0.00 0.00 0.00 2.52
3308 9822 6.831976 AGTAAAGTCTCCATGTGTCTTCTTT 58.168 36.000 0.00 0.00 0.00 2.52
3309 9823 6.931840 AGTAAAGTCTCCATGTGTCTTCTTTC 59.068 38.462 0.00 0.00 0.00 2.62
3310 9824 4.963318 AGTCTCCATGTGTCTTCTTTCA 57.037 40.909 0.00 0.00 0.00 2.69
3311 9825 5.296151 AGTCTCCATGTGTCTTCTTTCAA 57.704 39.130 0.00 0.00 0.00 2.69
3312 9826 5.684704 AGTCTCCATGTGTCTTCTTTCAAA 58.315 37.500 0.00 0.00 0.00 2.69
3313 9827 6.122277 AGTCTCCATGTGTCTTCTTTCAAAA 58.878 36.000 0.00 0.00 0.00 2.44
3314 9828 6.603201 AGTCTCCATGTGTCTTCTTTCAAAAA 59.397 34.615 0.00 0.00 0.00 1.94
3399 9914 5.944135 AGACTAGAAGGGTGTAGGAGATAC 58.056 45.833 0.00 0.00 34.72 2.24
3509 10079 3.245264 GGGAAGTCAGATTCAAGGGGAAA 60.245 47.826 0.00 0.00 39.39 3.13
3540 10110 8.296713 TGAGATTAAAAATCTGGCACAAGTAAC 58.703 33.333 6.88 0.00 38.70 2.50
3579 10151 1.103398 ACTTGTGTGCCCTGCTTGAC 61.103 55.000 0.00 0.00 0.00 3.18
3612 10184 5.346522 CGGCGTTTTAGAGGATAACTACTT 58.653 41.667 0.00 0.00 0.00 2.24
3642 10214 9.807649 CTTTCAATATGTTAAGAATGAAAGGGG 57.192 33.333 19.94 6.62 0.00 4.79
3658 10230 2.070573 AGGGGTGGAACATTAGTTGGT 58.929 47.619 0.00 0.00 44.52 3.67
3659 10231 2.167662 GGGGTGGAACATTAGTTGGTG 58.832 52.381 0.00 0.00 44.52 4.17
3695 10267 3.320673 AGGTTGTTCCTCAAGATCGAC 57.679 47.619 0.00 0.00 44.42 4.20
3712 10405 3.521560 TCGACCAAATGATAGCAGTGAC 58.478 45.455 0.00 0.00 0.00 3.67
3761 10570 5.359576 ACATGTTGCTCAAGGAAAACACTTA 59.640 36.000 0.00 0.00 35.51 2.24
3816 10636 2.513026 GATCGCTGTGAGCTGGTGGT 62.513 60.000 0.00 0.00 39.60 4.16
3853 10681 5.477510 TGTATTGATGGATTTTGGTTGTGC 58.522 37.500 0.00 0.00 0.00 4.57
3855 10683 4.686191 TTGATGGATTTTGGTTGTGCTT 57.314 36.364 0.00 0.00 0.00 3.91
3856 10684 5.798125 TTGATGGATTTTGGTTGTGCTTA 57.202 34.783 0.00 0.00 0.00 3.09
3857 10685 5.389859 TGATGGATTTTGGTTGTGCTTAG 57.610 39.130 0.00 0.00 0.00 2.18
3858 10686 3.658757 TGGATTTTGGTTGTGCTTAGC 57.341 42.857 0.00 0.00 0.00 3.09
3859 10687 2.961741 TGGATTTTGGTTGTGCTTAGCA 59.038 40.909 1.39 1.39 35.60 3.49
3860 10688 3.386078 TGGATTTTGGTTGTGCTTAGCAA 59.614 39.130 9.05 0.00 41.47 3.91
3990 10870 4.929211 CAGGTCGATATGAAACTTGTCACA 59.071 41.667 0.00 0.00 0.00 3.58
4023 10903 9.784531 AAGGTAGAGTGGAACATGATAATATTG 57.215 33.333 0.00 0.00 44.52 1.90
4024 10904 8.938883 AGGTAGAGTGGAACATGATAATATTGT 58.061 33.333 0.00 0.00 44.52 2.71
4030 10910 7.933577 AGTGGAACATGATAATATTGTCGTGAT 59.066 33.333 30.16 22.67 44.52 3.06
4070 10950 8.996024 ACTAAAAGTACAATGCAGTTTTTGTT 57.004 26.923 8.59 0.00 37.29 2.83
4071 10951 9.430623 ACTAAAAGTACAATGCAGTTTTTGTTT 57.569 25.926 8.59 0.88 37.29 2.83
4075 10955 9.646427 AAAGTACAATGCAGTTTTTGTTTTAGA 57.354 25.926 8.59 0.00 37.29 2.10
4084 10964 6.075572 GCAGTTTTTGTTTTAGACACGACATC 60.076 38.462 0.00 0.00 38.18 3.06
4109 10989 9.436957 TCTCAGGAACTTAGACAATATGAAAAC 57.563 33.333 0.00 0.00 33.25 2.43
4149 11029 9.665719 ACAAAATACAAGACTGGAAACAAAAAT 57.334 25.926 0.00 0.00 42.06 1.82
4172 11052 8.532977 AATACAATATGAACTGCCAACAAAAC 57.467 30.769 0.00 0.00 0.00 2.43
4173 11053 4.981674 ACAATATGAACTGCCAACAAAACG 59.018 37.500 0.00 0.00 0.00 3.60
4178 11058 4.307432 TGAACTGCCAACAAAACGAAAAA 58.693 34.783 0.00 0.00 0.00 1.94
4256 11136 2.820787 AGACACCAGAACTTAGACGGAG 59.179 50.000 0.00 0.00 0.00 4.63
4257 11137 1.272769 ACACCAGAACTTAGACGGAGC 59.727 52.381 0.00 0.00 0.00 4.70
4258 11138 0.526662 ACCAGAACTTAGACGGAGCG 59.473 55.000 0.00 0.00 0.00 5.03
4259 11139 0.809385 CCAGAACTTAGACGGAGCGA 59.191 55.000 0.00 0.00 0.00 4.93
4260 11140 1.201647 CCAGAACTTAGACGGAGCGAA 59.798 52.381 0.00 0.00 0.00 4.70
4261 11141 2.520979 CAGAACTTAGACGGAGCGAAG 58.479 52.381 0.00 0.00 0.00 3.79
4278 11158 3.873529 CGAAGCGGCCTTTATTCAATAC 58.126 45.455 0.00 0.00 0.00 1.89
4279 11159 3.603857 CGAAGCGGCCTTTATTCAATACG 60.604 47.826 0.00 0.00 0.00 3.06
4280 11160 3.188159 AGCGGCCTTTATTCAATACGA 57.812 42.857 0.00 0.00 0.00 3.43
4281 11161 3.740115 AGCGGCCTTTATTCAATACGAT 58.260 40.909 0.00 0.00 0.00 3.73
4282 11162 4.890088 AGCGGCCTTTATTCAATACGATA 58.110 39.130 0.00 0.00 0.00 2.92
4283 11163 4.689345 AGCGGCCTTTATTCAATACGATAC 59.311 41.667 0.00 0.00 0.00 2.24
4284 11164 4.142966 GCGGCCTTTATTCAATACGATACC 60.143 45.833 0.00 0.00 0.00 2.73
4285 11165 4.992319 CGGCCTTTATTCAATACGATACCA 59.008 41.667 0.00 0.00 0.00 3.25
4286 11166 5.642063 CGGCCTTTATTCAATACGATACCAT 59.358 40.000 0.00 0.00 0.00 3.55
4287 11167 6.183360 CGGCCTTTATTCAATACGATACCATC 60.183 42.308 0.00 0.00 0.00 3.51
4288 11168 6.879458 GGCCTTTATTCAATACGATACCATCT 59.121 38.462 0.00 0.00 0.00 2.90
4289 11169 7.064728 GGCCTTTATTCAATACGATACCATCTC 59.935 40.741 0.00 0.00 0.00 2.75
4290 11170 7.602644 GCCTTTATTCAATACGATACCATCTCA 59.397 37.037 0.00 0.00 0.00 3.27
4291 11171 9.489084 CCTTTATTCAATACGATACCATCTCAA 57.511 33.333 0.00 0.00 0.00 3.02
4293 11173 9.825109 TTTATTCAATACGATACCATCTCAACA 57.175 29.630 0.00 0.00 0.00 3.33
4294 11174 9.825109 TTATTCAATACGATACCATCTCAACAA 57.175 29.630 0.00 0.00 0.00 2.83
4295 11175 7.534085 TTCAATACGATACCATCTCAACAAC 57.466 36.000 0.00 0.00 0.00 3.32
4296 11176 6.873997 TCAATACGATACCATCTCAACAACT 58.126 36.000 0.00 0.00 0.00 3.16
4297 11177 6.756542 TCAATACGATACCATCTCAACAACTG 59.243 38.462 0.00 0.00 0.00 3.16
4298 11178 3.861840 ACGATACCATCTCAACAACTGG 58.138 45.455 0.00 0.00 34.84 4.00
4299 11179 2.609459 CGATACCATCTCAACAACTGGC 59.391 50.000 0.00 0.00 31.72 4.85
4300 11180 3.609853 GATACCATCTCAACAACTGGCA 58.390 45.455 0.00 0.00 31.72 4.92
4301 11181 1.609208 ACCATCTCAACAACTGGCAC 58.391 50.000 0.00 0.00 31.72 5.01
4302 11182 1.133823 ACCATCTCAACAACTGGCACA 60.134 47.619 0.00 0.00 31.72 4.57
4303 11183 2.165167 CCATCTCAACAACTGGCACAT 58.835 47.619 0.00 0.00 38.20 3.21
4304 11184 2.559668 CCATCTCAACAACTGGCACATT 59.440 45.455 0.00 0.00 38.20 2.71
4305 11185 3.006110 CCATCTCAACAACTGGCACATTT 59.994 43.478 0.00 0.00 38.20 2.32
4306 11186 4.501915 CCATCTCAACAACTGGCACATTTT 60.502 41.667 0.00 0.00 38.20 1.82
4307 11187 5.278907 CCATCTCAACAACTGGCACATTTTA 60.279 40.000 0.00 0.00 38.20 1.52
4308 11188 5.437289 TCTCAACAACTGGCACATTTTAG 57.563 39.130 0.00 0.00 38.20 1.85
4309 11189 5.129634 TCTCAACAACTGGCACATTTTAGA 58.870 37.500 0.00 0.00 38.20 2.10
4310 11190 5.592282 TCTCAACAACTGGCACATTTTAGAA 59.408 36.000 0.00 0.00 38.20 2.10
4311 11191 6.265196 TCTCAACAACTGGCACATTTTAGAAT 59.735 34.615 0.00 0.00 38.20 2.40
4312 11192 6.215121 TCAACAACTGGCACATTTTAGAATG 58.785 36.000 4.50 4.50 46.47 2.67
4313 11193 6.040278 TCAACAACTGGCACATTTTAGAATGA 59.960 34.615 12.62 0.00 44.37 2.57
4314 11194 6.403866 ACAACTGGCACATTTTAGAATGAA 57.596 33.333 12.62 0.00 44.37 2.57
4315 11195 6.215845 ACAACTGGCACATTTTAGAATGAAC 58.784 36.000 12.62 4.20 44.37 3.18
4316 11196 6.183360 ACAACTGGCACATTTTAGAATGAACA 60.183 34.615 12.62 7.23 44.37 3.18
4317 11197 5.772521 ACTGGCACATTTTAGAATGAACAC 58.227 37.500 12.62 1.61 44.37 3.32
4318 11198 5.301551 ACTGGCACATTTTAGAATGAACACA 59.698 36.000 12.62 5.47 44.37 3.72
4319 11199 5.527951 TGGCACATTTTAGAATGAACACAC 58.472 37.500 12.62 0.00 44.37 3.82
4320 11200 5.068329 TGGCACATTTTAGAATGAACACACA 59.932 36.000 12.62 1.18 44.37 3.72
4321 11201 5.982516 GGCACATTTTAGAATGAACACACAA 59.017 36.000 12.62 0.00 44.37 3.33
4322 11202 6.074356 GGCACATTTTAGAATGAACACACAAC 60.074 38.462 12.62 0.00 44.37 3.32
4323 11203 6.074356 GCACATTTTAGAATGAACACACAACC 60.074 38.462 12.62 0.00 44.37 3.77
4324 11204 6.977502 CACATTTTAGAATGAACACACAACCA 59.022 34.615 12.62 0.00 44.37 3.67
4325 11205 7.490725 CACATTTTAGAATGAACACACAACCAA 59.509 33.333 12.62 0.00 44.37 3.67
4326 11206 7.706179 ACATTTTAGAATGAACACACAACCAAG 59.294 33.333 12.62 0.00 44.37 3.61
4327 11207 7.397892 TTTTAGAATGAACACACAACCAAGA 57.602 32.000 0.00 0.00 0.00 3.02
4328 11208 7.581213 TTTAGAATGAACACACAACCAAGAT 57.419 32.000 0.00 0.00 0.00 2.40
4329 11209 5.443185 AGAATGAACACACAACCAAGATG 57.557 39.130 0.00 0.00 0.00 2.90
4330 11210 3.648339 ATGAACACACAACCAAGATGC 57.352 42.857 0.00 0.00 0.00 3.91
4331 11211 2.373224 TGAACACACAACCAAGATGCA 58.627 42.857 0.00 0.00 0.00 3.96
4332 11212 2.098934 TGAACACACAACCAAGATGCAC 59.901 45.455 0.00 0.00 0.00 4.57
4333 11213 1.761449 ACACACAACCAAGATGCACA 58.239 45.000 0.00 0.00 0.00 4.57
4334 11214 1.405105 ACACACAACCAAGATGCACAC 59.595 47.619 0.00 0.00 0.00 3.82
4335 11215 0.662619 ACACAACCAAGATGCACACG 59.337 50.000 0.00 0.00 0.00 4.49
4336 11216 0.943673 CACAACCAAGATGCACACGA 59.056 50.000 0.00 0.00 0.00 4.35
4337 11217 1.069703 CACAACCAAGATGCACACGAG 60.070 52.381 0.00 0.00 0.00 4.18
4338 11218 1.229428 CAACCAAGATGCACACGAGT 58.771 50.000 0.00 0.00 0.00 4.18
4352 11232 4.928661 ACACGAGTGATTTGATTAGTGC 57.071 40.909 10.50 0.00 32.22 4.40
4353 11233 3.684788 ACACGAGTGATTTGATTAGTGCC 59.315 43.478 10.50 0.00 32.22 5.01
4354 11234 3.935203 CACGAGTGATTTGATTAGTGCCT 59.065 43.478 0.00 0.00 0.00 4.75
4355 11235 4.033358 CACGAGTGATTTGATTAGTGCCTC 59.967 45.833 0.00 0.00 0.00 4.70
4356 11236 3.557595 CGAGTGATTTGATTAGTGCCTCC 59.442 47.826 0.00 0.00 0.00 4.30
4357 11237 3.879892 GAGTGATTTGATTAGTGCCTCCC 59.120 47.826 0.00 0.00 0.00 4.30
4358 11238 3.525199 AGTGATTTGATTAGTGCCTCCCT 59.475 43.478 0.00 0.00 0.00 4.20
4359 11239 4.018050 AGTGATTTGATTAGTGCCTCCCTT 60.018 41.667 0.00 0.00 0.00 3.95
4360 11240 4.096984 GTGATTTGATTAGTGCCTCCCTTG 59.903 45.833 0.00 0.00 0.00 3.61
4361 11241 2.128771 TTGATTAGTGCCTCCCTTGC 57.871 50.000 0.00 0.00 0.00 4.01
4362 11242 1.289160 TGATTAGTGCCTCCCTTGCT 58.711 50.000 0.00 0.00 0.00 3.91
4363 11243 1.065199 TGATTAGTGCCTCCCTTGCTG 60.065 52.381 0.00 0.00 0.00 4.41
4364 11244 0.995024 ATTAGTGCCTCCCTTGCTGT 59.005 50.000 0.00 0.00 0.00 4.40
4365 11245 0.324943 TTAGTGCCTCCCTTGCTGTC 59.675 55.000 0.00 0.00 0.00 3.51
4366 11246 1.553690 TAGTGCCTCCCTTGCTGTCC 61.554 60.000 0.00 0.00 0.00 4.02
4367 11247 2.853542 TGCCTCCCTTGCTGTCCA 60.854 61.111 0.00 0.00 0.00 4.02
4368 11248 2.045536 GCCTCCCTTGCTGTCCAG 60.046 66.667 0.00 0.00 0.00 3.86
4369 11249 2.596851 GCCTCCCTTGCTGTCCAGA 61.597 63.158 0.00 0.00 0.00 3.86
4370 11250 1.601171 CCTCCCTTGCTGTCCAGAG 59.399 63.158 0.00 0.00 0.00 3.35
4371 11251 1.078567 CTCCCTTGCTGTCCAGAGC 60.079 63.158 0.00 0.00 39.62 4.09
4372 11252 1.537397 TCCCTTGCTGTCCAGAGCT 60.537 57.895 0.00 0.00 39.90 4.09
4373 11253 0.252239 TCCCTTGCTGTCCAGAGCTA 60.252 55.000 0.00 0.00 39.90 3.32
4374 11254 0.615331 CCCTTGCTGTCCAGAGCTAA 59.385 55.000 0.00 0.00 39.90 3.09
4375 11255 1.003580 CCCTTGCTGTCCAGAGCTAAA 59.996 52.381 0.00 0.00 39.90 1.85
4376 11256 2.356535 CCCTTGCTGTCCAGAGCTAAAT 60.357 50.000 0.00 0.00 39.90 1.40
4377 11257 3.350833 CCTTGCTGTCCAGAGCTAAATT 58.649 45.455 0.00 0.00 39.90 1.82
4378 11258 4.517285 CCTTGCTGTCCAGAGCTAAATTA 58.483 43.478 0.00 0.00 39.90 1.40
4379 11259 5.128919 CCTTGCTGTCCAGAGCTAAATTAT 58.871 41.667 0.00 0.00 39.90 1.28
4380 11260 5.591877 CCTTGCTGTCCAGAGCTAAATTATT 59.408 40.000 0.00 0.00 39.90 1.40
4381 11261 6.096001 CCTTGCTGTCCAGAGCTAAATTATTT 59.904 38.462 0.00 0.00 39.90 1.40
4382 11262 7.363268 CCTTGCTGTCCAGAGCTAAATTATTTT 60.363 37.037 0.00 0.00 39.90 1.82
4383 11263 7.466746 TGCTGTCCAGAGCTAAATTATTTTT 57.533 32.000 0.00 0.00 39.90 1.94
4384 11264 8.574251 TGCTGTCCAGAGCTAAATTATTTTTA 57.426 30.769 0.00 0.00 39.90 1.52
4385 11265 9.189156 TGCTGTCCAGAGCTAAATTATTTTTAT 57.811 29.630 0.00 0.00 39.90 1.40
4410 11290 7.872113 AGAGAGCCTAATTAATTGTTCAAGG 57.128 36.000 11.05 9.83 0.00 3.61
4411 11291 7.406104 AGAGAGCCTAATTAATTGTTCAAGGT 58.594 34.615 11.05 1.00 0.00 3.50
4412 11292 7.337942 AGAGAGCCTAATTAATTGTTCAAGGTG 59.662 37.037 11.05 0.00 0.00 4.00
4413 11293 7.175104 AGAGCCTAATTAATTGTTCAAGGTGA 58.825 34.615 11.05 0.00 0.00 4.02
4414 11294 7.669722 AGAGCCTAATTAATTGTTCAAGGTGAA 59.330 33.333 11.05 0.00 33.32 3.18
4415 11295 7.830739 AGCCTAATTAATTGTTCAAGGTGAAG 58.169 34.615 11.05 0.00 37.00 3.02
4416 11296 7.035612 GCCTAATTAATTGTTCAAGGTGAAGG 58.964 38.462 11.05 6.00 37.00 3.46
4417 11297 7.093945 GCCTAATTAATTGTTCAAGGTGAAGGA 60.094 37.037 11.05 0.00 37.00 3.36
4418 11298 8.802267 CCTAATTAATTGTTCAAGGTGAAGGAA 58.198 33.333 11.05 0.00 37.00 3.36
4420 11300 8.887036 AATTAATTGTTCAAGGTGAAGGAAAC 57.113 30.769 0.00 0.00 37.00 2.78
4422 11302 4.981806 TTGTTCAAGGTGAAGGAAACTG 57.018 40.909 0.00 0.00 42.68 3.16
4423 11303 3.287222 TGTTCAAGGTGAAGGAAACTGG 58.713 45.455 0.00 0.00 42.68 4.00
4424 11304 2.623416 GTTCAAGGTGAAGGAAACTGGG 59.377 50.000 0.00 0.00 42.68 4.45
4425 11305 1.850345 TCAAGGTGAAGGAAACTGGGT 59.150 47.619 0.00 0.00 42.68 4.51
4426 11306 3.050089 TCAAGGTGAAGGAAACTGGGTA 58.950 45.455 0.00 0.00 42.68 3.69
4427 11307 3.460340 TCAAGGTGAAGGAAACTGGGTAA 59.540 43.478 0.00 0.00 42.68 2.85
4428 11308 4.079672 TCAAGGTGAAGGAAACTGGGTAAA 60.080 41.667 0.00 0.00 42.68 2.01
4429 11309 4.529716 AGGTGAAGGAAACTGGGTAAAA 57.470 40.909 0.00 0.00 42.68 1.52
4430 11310 4.470602 AGGTGAAGGAAACTGGGTAAAAG 58.529 43.478 0.00 0.00 42.68 2.27
4431 11311 4.167307 AGGTGAAGGAAACTGGGTAAAAGA 59.833 41.667 0.00 0.00 42.68 2.52
4432 11312 4.277672 GGTGAAGGAAACTGGGTAAAAGAC 59.722 45.833 0.00 0.00 42.68 3.01
4433 11313 5.131067 GTGAAGGAAACTGGGTAAAAGACT 58.869 41.667 0.00 0.00 42.68 3.24
4434 11314 5.008712 GTGAAGGAAACTGGGTAAAAGACTG 59.991 44.000 0.00 0.00 42.68 3.51
4435 11315 5.104277 TGAAGGAAACTGGGTAAAAGACTGA 60.104 40.000 0.00 0.00 42.68 3.41
4436 11316 5.382664 AGGAAACTGGGTAAAAGACTGAA 57.617 39.130 0.00 0.00 41.13 3.02
4437 11317 5.762279 AGGAAACTGGGTAAAAGACTGAAA 58.238 37.500 0.00 0.00 41.13 2.69
4438 11318 5.593095 AGGAAACTGGGTAAAAGACTGAAAC 59.407 40.000 0.00 0.00 41.13 2.78
4439 11319 5.494632 AAACTGGGTAAAAGACTGAAACG 57.505 39.130 0.00 0.00 0.00 3.60
4440 11320 3.473625 ACTGGGTAAAAGACTGAAACGG 58.526 45.455 0.00 0.00 0.00 4.44
4441 11321 2.223745 TGGGTAAAAGACTGAAACGGC 58.776 47.619 0.00 0.00 0.00 5.68
4442 11322 2.223745 GGGTAAAAGACTGAAACGGCA 58.776 47.619 0.00 0.00 0.00 5.69
4443 11323 2.225727 GGGTAAAAGACTGAAACGGCAG 59.774 50.000 0.00 0.00 41.63 4.85
4444 11324 3.135994 GGTAAAAGACTGAAACGGCAGA 58.864 45.455 8.84 0.00 39.20 4.26
4445 11325 3.059120 GGTAAAAGACTGAAACGGCAGAC 60.059 47.826 8.84 3.52 39.20 3.51
4457 11337 2.315246 GGCAGACGATTCATCCAGC 58.685 57.895 0.00 0.00 0.00 4.85
4458 11338 0.179062 GGCAGACGATTCATCCAGCT 60.179 55.000 0.00 0.00 0.00 4.24
4459 11339 1.216122 GCAGACGATTCATCCAGCTC 58.784 55.000 0.00 0.00 0.00 4.09
4460 11340 1.202510 GCAGACGATTCATCCAGCTCT 60.203 52.381 0.00 0.00 0.00 4.09
4461 11341 2.035193 GCAGACGATTCATCCAGCTCTA 59.965 50.000 0.00 0.00 0.00 2.43
4462 11342 3.305950 GCAGACGATTCATCCAGCTCTAT 60.306 47.826 0.00 0.00 0.00 1.98
4463 11343 4.236147 CAGACGATTCATCCAGCTCTATG 58.764 47.826 0.00 0.00 0.00 2.23
4464 11344 3.894427 AGACGATTCATCCAGCTCTATGT 59.106 43.478 0.00 0.00 0.00 2.29
4465 11345 4.022416 AGACGATTCATCCAGCTCTATGTC 60.022 45.833 0.00 0.00 0.00 3.06
4466 11346 3.894427 ACGATTCATCCAGCTCTATGTCT 59.106 43.478 0.00 0.00 0.00 3.41
4467 11347 4.343526 ACGATTCATCCAGCTCTATGTCTT 59.656 41.667 0.00 0.00 0.00 3.01
4468 11348 5.536538 ACGATTCATCCAGCTCTATGTCTTA 59.463 40.000 0.00 0.00 0.00 2.10
4469 11349 6.210385 ACGATTCATCCAGCTCTATGTCTTAT 59.790 38.462 0.00 0.00 0.00 1.73
4470 11350 7.394641 ACGATTCATCCAGCTCTATGTCTTATA 59.605 37.037 0.00 0.00 0.00 0.98
4471 11351 8.412456 CGATTCATCCAGCTCTATGTCTTATAT 58.588 37.037 5.04 0.00 0.00 0.86
4506 11386 4.888038 AACTTAAAAGTTCCACACCGAC 57.112 40.909 2.24 0.00 45.65 4.79
4507 11387 3.208594 ACTTAAAAGTTCCACACCGACC 58.791 45.455 0.00 0.00 35.21 4.79
4508 11388 3.118149 ACTTAAAAGTTCCACACCGACCT 60.118 43.478 0.00 0.00 35.21 3.85
4509 11389 4.101430 ACTTAAAAGTTCCACACCGACCTA 59.899 41.667 0.00 0.00 35.21 3.08
4510 11390 3.564053 AAAAGTTCCACACCGACCTAA 57.436 42.857 0.00 0.00 0.00 2.69
4511 11391 3.564053 AAAGTTCCACACCGACCTAAA 57.436 42.857 0.00 0.00 0.00 1.85
4512 11392 3.564053 AAGTTCCACACCGACCTAAAA 57.436 42.857 0.00 0.00 0.00 1.52
4513 11393 3.121738 AGTTCCACACCGACCTAAAAG 57.878 47.619 0.00 0.00 0.00 2.27
4514 11394 2.701951 AGTTCCACACCGACCTAAAAGA 59.298 45.455 0.00 0.00 0.00 2.52
4515 11395 3.135167 AGTTCCACACCGACCTAAAAGAA 59.865 43.478 0.00 0.00 0.00 2.52
4516 11396 3.396260 TCCACACCGACCTAAAAGAAG 57.604 47.619 0.00 0.00 0.00 2.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.212934 AGACGACTACCTCCAGGGGA 61.213 60.000 0.00 0.00 40.27 4.81
1 2 0.752376 GAGACGACTACCTCCAGGGG 60.752 65.000 0.00 0.00 40.27 4.79
2 3 1.096386 CGAGACGACTACCTCCAGGG 61.096 65.000 0.00 0.00 40.27 4.45
3 4 0.392729 ACGAGACGACTACCTCCAGG 60.393 60.000 0.00 0.00 42.17 4.45
4 5 1.008329 GACGAGACGACTACCTCCAG 58.992 60.000 0.00 0.00 0.00 3.86
5 6 0.738762 CGACGAGACGACTACCTCCA 60.739 60.000 0.00 0.00 35.09 3.86
6 7 0.459237 TCGACGAGACGACTACCTCC 60.459 60.000 0.00 0.00 37.37 4.30
7 8 1.258458 CATCGACGAGACGACTACCTC 59.742 57.143 3.01 0.00 44.84 3.85
8 9 1.288350 CATCGACGAGACGACTACCT 58.712 55.000 3.01 0.00 44.84 3.08
9 10 0.316032 GCATCGACGAGACGACTACC 60.316 60.000 3.01 0.00 44.84 3.18
10 11 0.651042 CGCATCGACGAGACGACTAC 60.651 60.000 14.98 0.00 44.84 2.73
11 12 1.634753 CGCATCGACGAGACGACTA 59.365 57.895 14.98 0.00 44.84 2.59
12 13 2.400006 CGCATCGACGAGACGACT 59.600 61.111 14.98 0.00 44.84 4.18
13 14 3.305773 GCGCATCGACGAGACGAC 61.306 66.667 21.96 11.77 44.84 4.34
14 15 3.436011 GAGCGCATCGACGAGACGA 62.436 63.158 21.96 0.00 46.04 4.20
15 16 3.013990 GAGCGCATCGACGAGACG 61.014 66.667 11.47 15.58 34.06 4.18
16 17 1.936880 CTGAGCGCATCGACGAGAC 60.937 63.158 11.47 0.00 34.06 3.36
17 18 2.405191 CTGAGCGCATCGACGAGA 59.595 61.111 11.47 0.00 34.06 4.04
18 19 2.653448 CCTGAGCGCATCGACGAG 60.653 66.667 11.47 0.00 34.06 4.18
19 20 3.440415 ACCTGAGCGCATCGACGA 61.440 61.111 11.47 0.00 34.06 4.20
20 21 3.250323 CACCTGAGCGCATCGACG 61.250 66.667 11.47 0.00 0.00 5.12
21 22 1.687494 GAACACCTGAGCGCATCGAC 61.687 60.000 11.47 0.00 0.00 4.20
22 23 1.446099 GAACACCTGAGCGCATCGA 60.446 57.895 11.47 0.00 0.00 3.59
23 24 2.792290 CGAACACCTGAGCGCATCG 61.792 63.158 11.47 2.37 0.00 3.84
24 25 1.687494 GACGAACACCTGAGCGCATC 61.687 60.000 11.47 4.91 0.00 3.91
25 26 1.738099 GACGAACACCTGAGCGCAT 60.738 57.895 11.47 0.00 0.00 4.73
26 27 2.355837 GACGAACACCTGAGCGCA 60.356 61.111 11.47 0.00 0.00 6.09
27 28 3.112709 GGACGAACACCTGAGCGC 61.113 66.667 0.00 0.00 0.00 5.92
28 29 0.600255 AAAGGACGAACACCTGAGCG 60.600 55.000 0.00 0.00 37.85 5.03
29 30 0.868406 CAAAGGACGAACACCTGAGC 59.132 55.000 0.00 0.00 37.85 4.26
30 31 0.868406 GCAAAGGACGAACACCTGAG 59.132 55.000 0.00 0.00 37.85 3.35
31 32 0.179234 TGCAAAGGACGAACACCTGA 59.821 50.000 0.00 0.00 37.85 3.86
32 33 1.002468 CTTGCAAAGGACGAACACCTG 60.002 52.381 0.00 0.00 41.27 4.00
33 34 1.308998 CTTGCAAAGGACGAACACCT 58.691 50.000 0.00 0.00 41.27 4.00
34 35 3.845625 CTTGCAAAGGACGAACACC 57.154 52.632 0.00 0.00 41.27 4.16
45 46 2.076100 CACCGCTATGAGACTTGCAAA 58.924 47.619 0.00 0.00 0.00 3.68
46 47 1.275010 TCACCGCTATGAGACTTGCAA 59.725 47.619 0.00 0.00 0.00 4.08
47 48 0.894835 TCACCGCTATGAGACTTGCA 59.105 50.000 0.00 0.00 0.00 4.08
48 49 1.661112 GTTCACCGCTATGAGACTTGC 59.339 52.381 0.00 0.00 0.00 4.01
49 50 2.926200 CAGTTCACCGCTATGAGACTTG 59.074 50.000 0.00 0.00 0.00 3.16
50 51 2.093973 CCAGTTCACCGCTATGAGACTT 60.094 50.000 0.00 0.00 0.00 3.01
51 52 1.478510 CCAGTTCACCGCTATGAGACT 59.521 52.381 0.00 0.00 0.00 3.24
52 53 1.204941 ACCAGTTCACCGCTATGAGAC 59.795 52.381 0.00 0.00 0.00 3.36
53 54 1.204704 CACCAGTTCACCGCTATGAGA 59.795 52.381 0.00 0.00 0.00 3.27
54 55 1.204704 TCACCAGTTCACCGCTATGAG 59.795 52.381 0.00 0.00 0.00 2.90
55 56 1.262417 TCACCAGTTCACCGCTATGA 58.738 50.000 0.00 0.00 0.00 2.15
56 57 2.159043 AGATCACCAGTTCACCGCTATG 60.159 50.000 0.00 0.00 0.00 2.23
57 58 2.111384 AGATCACCAGTTCACCGCTAT 58.889 47.619 0.00 0.00 0.00 2.97
58 59 1.204704 CAGATCACCAGTTCACCGCTA 59.795 52.381 0.00 0.00 0.00 4.26
59 60 0.036952 CAGATCACCAGTTCACCGCT 60.037 55.000 0.00 0.00 0.00 5.52
60 61 1.021390 CCAGATCACCAGTTCACCGC 61.021 60.000 0.00 0.00 0.00 5.68
61 62 0.321671 ACCAGATCACCAGTTCACCG 59.678 55.000 0.00 0.00 0.00 4.94
62 63 2.567615 AGTACCAGATCACCAGTTCACC 59.432 50.000 0.00 0.00 0.00 4.02
63 64 3.006967 ACAGTACCAGATCACCAGTTCAC 59.993 47.826 0.00 0.00 0.00 3.18
64 65 3.239449 ACAGTACCAGATCACCAGTTCA 58.761 45.455 0.00 0.00 0.00 3.18
65 66 3.963428 ACAGTACCAGATCACCAGTTC 57.037 47.619 0.00 0.00 0.00 3.01
66 67 4.838986 ACTAACAGTACCAGATCACCAGTT 59.161 41.667 0.00 0.00 0.00 3.16
67 68 4.220821 CACTAACAGTACCAGATCACCAGT 59.779 45.833 0.00 0.00 0.00 4.00
68 69 4.382040 CCACTAACAGTACCAGATCACCAG 60.382 50.000 0.00 0.00 0.00 4.00
69 70 3.513912 CCACTAACAGTACCAGATCACCA 59.486 47.826 0.00 0.00 0.00 4.17
70 71 3.118738 CCCACTAACAGTACCAGATCACC 60.119 52.174 0.00 0.00 0.00 4.02
71 72 3.514309 ACCCACTAACAGTACCAGATCAC 59.486 47.826 0.00 0.00 0.00 3.06
72 73 3.513912 CACCCACTAACAGTACCAGATCA 59.486 47.826 0.00 0.00 0.00 2.92
73 74 3.118738 CCACCCACTAACAGTACCAGATC 60.119 52.174 0.00 0.00 0.00 2.75
74 75 2.838202 CCACCCACTAACAGTACCAGAT 59.162 50.000 0.00 0.00 0.00 2.90
75 76 2.253610 CCACCCACTAACAGTACCAGA 58.746 52.381 0.00 0.00 0.00 3.86
76 77 1.975680 ACCACCCACTAACAGTACCAG 59.024 52.381 0.00 0.00 0.00 4.00
77 78 2.106187 ACCACCCACTAACAGTACCA 57.894 50.000 0.00 0.00 0.00 3.25
78 79 3.497103 AAACCACCCACTAACAGTACC 57.503 47.619 0.00 0.00 0.00 3.34
79 80 4.037089 CCAAAAACCACCCACTAACAGTAC 59.963 45.833 0.00 0.00 0.00 2.73
80 81 4.208746 CCAAAAACCACCCACTAACAGTA 58.791 43.478 0.00 0.00 0.00 2.74
81 82 3.028130 CCAAAAACCACCCACTAACAGT 58.972 45.455 0.00 0.00 0.00 3.55
82 83 3.028130 ACCAAAAACCACCCACTAACAG 58.972 45.455 0.00 0.00 0.00 3.16
83 84 3.103080 ACCAAAAACCACCCACTAACA 57.897 42.857 0.00 0.00 0.00 2.41
84 85 3.196039 ACAACCAAAAACCACCCACTAAC 59.804 43.478 0.00 0.00 0.00 2.34
85 86 3.442076 ACAACCAAAAACCACCCACTAA 58.558 40.909 0.00 0.00 0.00 2.24
86 87 3.103080 ACAACCAAAAACCACCCACTA 57.897 42.857 0.00 0.00 0.00 2.74
87 88 1.945580 ACAACCAAAAACCACCCACT 58.054 45.000 0.00 0.00 0.00 4.00
88 89 2.235155 AGAACAACCAAAAACCACCCAC 59.765 45.455 0.00 0.00 0.00 4.61
89 90 2.541466 AGAACAACCAAAAACCACCCA 58.459 42.857 0.00 0.00 0.00 4.51
90 91 3.266636 CAAGAACAACCAAAAACCACCC 58.733 45.455 0.00 0.00 0.00 4.61
91 92 3.930229 GACAAGAACAACCAAAAACCACC 59.070 43.478 0.00 0.00 0.00 4.61
92 93 3.610677 CGACAAGAACAACCAAAAACCAC 59.389 43.478 0.00 0.00 0.00 4.16
93 94 3.256136 ACGACAAGAACAACCAAAAACCA 59.744 39.130 0.00 0.00 0.00 3.67
94 95 3.840468 ACGACAAGAACAACCAAAAACC 58.160 40.909 0.00 0.00 0.00 3.27
95 96 4.682401 ACAACGACAAGAACAACCAAAAAC 59.318 37.500 0.00 0.00 0.00 2.43
96 97 4.872664 ACAACGACAAGAACAACCAAAAA 58.127 34.783 0.00 0.00 0.00 1.94
97 98 4.506886 ACAACGACAAGAACAACCAAAA 57.493 36.364 0.00 0.00 0.00 2.44
98 99 4.506886 AACAACGACAAGAACAACCAAA 57.493 36.364 0.00 0.00 0.00 3.28
99 100 4.506886 AAACAACGACAAGAACAACCAA 57.493 36.364 0.00 0.00 0.00 3.67
468 469 9.219603 TGTGTATGTCTCCATTTTTAGAGAAAG 57.780 33.333 0.00 0.00 40.69 2.62
485 488 5.282510 CGGGTTCTATCTTCTGTGTATGTC 58.717 45.833 0.00 0.00 0.00 3.06
486 489 4.099573 CCGGGTTCTATCTTCTGTGTATGT 59.900 45.833 0.00 0.00 0.00 2.29
493 496 2.101582 CCTCACCGGGTTCTATCTTCTG 59.898 54.545 6.32 0.00 0.00 3.02
497 500 0.032017 AGCCTCACCGGGTTCTATCT 60.032 55.000 6.32 0.00 41.88 1.98
513 516 6.347725 CCATACGCATCTATGTTTCTTTAGCC 60.348 42.308 0.00 0.00 0.00 3.93
515 518 6.929049 TCCCATACGCATCTATGTTTCTTTAG 59.071 38.462 0.00 0.00 0.00 1.85
578 581 4.321008 CGACCAAGCTCACAAGTAGAACTA 60.321 45.833 0.00 0.00 0.00 2.24
582 585 1.272490 CCGACCAAGCTCACAAGTAGA 59.728 52.381 0.00 0.00 0.00 2.59
590 593 0.911769 ATCCAATCCGACCAAGCTCA 59.088 50.000 0.00 0.00 0.00 4.26
591 594 2.044123 AATCCAATCCGACCAAGCTC 57.956 50.000 0.00 0.00 0.00 4.09
592 595 3.864789 ATAATCCAATCCGACCAAGCT 57.135 42.857 0.00 0.00 0.00 3.74
593 596 4.003648 CCTATAATCCAATCCGACCAAGC 58.996 47.826 0.00 0.00 0.00 4.01
594 597 5.012148 ACTCCTATAATCCAATCCGACCAAG 59.988 44.000 0.00 0.00 0.00 3.61
595 598 4.905456 ACTCCTATAATCCAATCCGACCAA 59.095 41.667 0.00 0.00 0.00 3.67
596 599 4.283467 CACTCCTATAATCCAATCCGACCA 59.717 45.833 0.00 0.00 0.00 4.02
597 600 4.322801 CCACTCCTATAATCCAATCCGACC 60.323 50.000 0.00 0.00 0.00 4.79
598 601 4.283722 ACCACTCCTATAATCCAATCCGAC 59.716 45.833 0.00 0.00 0.00 4.79
599 602 4.489737 ACCACTCCTATAATCCAATCCGA 58.510 43.478 0.00 0.00 0.00 4.55
600 603 4.891992 ACCACTCCTATAATCCAATCCG 57.108 45.455 0.00 0.00 0.00 4.18
601 604 6.681729 TGTACCACTCCTATAATCCAATCC 57.318 41.667 0.00 0.00 0.00 3.01
612 615 9.750783 GGAATAGAGTATAATGTACCACTCCTA 57.249 37.037 0.00 0.00 38.53 2.94
613 616 7.674772 GGGAATAGAGTATAATGTACCACTCCT 59.325 40.741 0.00 0.00 38.53 3.69
614 617 7.674772 AGGGAATAGAGTATAATGTACCACTCC 59.325 40.741 0.00 0.00 38.53 3.85
615 618 8.524487 CAGGGAATAGAGTATAATGTACCACTC 58.476 40.741 0.00 0.00 38.13 3.51
616 619 7.455008 CCAGGGAATAGAGTATAATGTACCACT 59.545 40.741 0.00 0.00 0.00 4.00
617 620 7.453752 TCCAGGGAATAGAGTATAATGTACCAC 59.546 40.741 0.00 0.00 0.00 4.16
618 621 7.541074 TCCAGGGAATAGAGTATAATGTACCA 58.459 38.462 0.00 0.00 0.00 3.25
619 622 8.611051 ATCCAGGGAATAGAGTATAATGTACC 57.389 38.462 0.00 0.00 0.00 3.34
620 623 9.482175 AGATCCAGGGAATAGAGTATAATGTAC 57.518 37.037 0.00 0.00 0.00 2.90
621 624 9.702253 GAGATCCAGGGAATAGAGTATAATGTA 57.298 37.037 0.00 0.00 0.00 2.29
622 625 8.405850 AGAGATCCAGGGAATAGAGTATAATGT 58.594 37.037 0.00 0.00 0.00 2.71
623 626 8.694540 CAGAGATCCAGGGAATAGAGTATAATG 58.305 40.741 0.00 0.00 0.00 1.90
624 627 8.628281 TCAGAGATCCAGGGAATAGAGTATAAT 58.372 37.037 0.00 0.00 0.00 1.28
625 628 8.001300 TCAGAGATCCAGGGAATAGAGTATAA 57.999 38.462 0.00 0.00 0.00 0.98
626 629 7.590359 TCAGAGATCCAGGGAATAGAGTATA 57.410 40.000 0.00 0.00 0.00 1.47
627 630 6.476409 TCAGAGATCCAGGGAATAGAGTAT 57.524 41.667 0.00 0.00 0.00 2.12
628 631 5.932027 TCAGAGATCCAGGGAATAGAGTA 57.068 43.478 0.00 0.00 0.00 2.59
629 632 4.823364 TCAGAGATCCAGGGAATAGAGT 57.177 45.455 0.00 0.00 0.00 3.24
630 633 5.419788 CAGATCAGAGATCCAGGGAATAGAG 59.580 48.000 3.52 0.00 0.00 2.43
631 634 5.075622 TCAGATCAGAGATCCAGGGAATAGA 59.924 44.000 3.52 0.00 0.00 1.98
632 635 5.331906 TCAGATCAGAGATCCAGGGAATAG 58.668 45.833 3.52 0.00 0.00 1.73
633 636 5.345307 TCAGATCAGAGATCCAGGGAATA 57.655 43.478 3.52 0.00 0.00 1.75
634 637 4.210611 TCAGATCAGAGATCCAGGGAAT 57.789 45.455 3.52 0.00 0.00 3.01
635 638 3.695357 TCAGATCAGAGATCCAGGGAA 57.305 47.619 3.52 0.00 0.00 3.97
636 639 3.574749 CTTCAGATCAGAGATCCAGGGA 58.425 50.000 3.52 0.00 0.00 4.20
637 640 2.037511 GCTTCAGATCAGAGATCCAGGG 59.962 54.545 3.52 0.00 0.00 4.45
638 641 2.967201 AGCTTCAGATCAGAGATCCAGG 59.033 50.000 3.52 0.00 0.00 4.45
639 642 5.787953 TTAGCTTCAGATCAGAGATCCAG 57.212 43.478 0.00 0.12 0.00 3.86
640 643 5.453057 GCTTTAGCTTCAGATCAGAGATCCA 60.453 44.000 0.00 0.00 38.21 3.41
641 644 4.990426 GCTTTAGCTTCAGATCAGAGATCC 59.010 45.833 0.00 0.00 38.21 3.36
642 645 5.599732 TGCTTTAGCTTCAGATCAGAGATC 58.400 41.667 0.00 0.00 42.66 2.75
643 646 5.611128 TGCTTTAGCTTCAGATCAGAGAT 57.389 39.130 0.00 0.00 42.66 2.75
644 647 5.186603 TCTTGCTTTAGCTTCAGATCAGAGA 59.813 40.000 0.00 0.00 42.66 3.10
645 648 5.417811 TCTTGCTTTAGCTTCAGATCAGAG 58.582 41.667 0.00 0.00 42.66 3.35
646 649 5.411831 TCTTGCTTTAGCTTCAGATCAGA 57.588 39.130 0.00 0.00 42.66 3.27
647 650 6.238429 GGAATCTTGCTTTAGCTTCAGATCAG 60.238 42.308 0.00 0.00 42.66 2.90
722 728 7.409697 CGATCAGTCCCAACAGTTATTAATTG 58.590 38.462 0.00 0.00 0.00 2.32
782 788 2.224784 GCACACCGGTTAAACAAGGTAG 59.775 50.000 2.97 0.00 34.83 3.18
783 789 2.158784 AGCACACCGGTTAAACAAGGTA 60.159 45.455 2.97 0.00 34.83 3.08
784 790 1.026584 GCACACCGGTTAAACAAGGT 58.973 50.000 2.97 0.00 37.49 3.50
803 809 6.363626 GTCAGTGTGTGTCATTAGTCAGTAAG 59.636 42.308 0.00 0.00 0.00 2.34
805 811 5.300792 TGTCAGTGTGTGTCATTAGTCAGTA 59.699 40.000 0.00 0.00 0.00 2.74
806 812 4.099419 TGTCAGTGTGTGTCATTAGTCAGT 59.901 41.667 0.00 0.00 0.00 3.41
807 813 4.620982 TGTCAGTGTGTGTCATTAGTCAG 58.379 43.478 0.00 0.00 0.00 3.51
808 814 4.099419 ACTGTCAGTGTGTGTCATTAGTCA 59.901 41.667 4.21 0.00 0.00 3.41
809 815 4.445718 CACTGTCAGTGTGTGTCATTAGTC 59.554 45.833 22.62 0.00 41.19 2.59
810 816 4.099419 TCACTGTCAGTGTGTGTCATTAGT 59.901 41.667 27.97 0.00 46.03 2.24
811 817 4.445718 GTCACTGTCAGTGTGTGTCATTAG 59.554 45.833 27.97 2.94 46.03 1.73
812 818 4.142049 TGTCACTGTCAGTGTGTGTCATTA 60.142 41.667 27.97 6.95 46.03 1.90
813 819 3.198068 GTCACTGTCAGTGTGTGTCATT 58.802 45.455 27.97 0.00 46.03 2.57
837 843 0.181114 GCCATGACCCATGAGTAGCA 59.819 55.000 8.38 0.00 43.81 3.49
849 855 2.927871 GCTTGTTGGTGAATGCCATGAC 60.928 50.000 0.00 0.00 38.48 3.06
850 856 1.273048 GCTTGTTGGTGAATGCCATGA 59.727 47.619 0.00 0.00 38.48 3.07
851 857 1.001068 TGCTTGTTGGTGAATGCCATG 59.999 47.619 0.00 0.00 38.48 3.66
852 858 1.340088 TGCTTGTTGGTGAATGCCAT 58.660 45.000 0.00 0.00 38.48 4.40
853 859 1.001068 CATGCTTGTTGGTGAATGCCA 59.999 47.619 0.00 0.00 36.62 4.92
854 860 1.717194 CATGCTTGTTGGTGAATGCC 58.283 50.000 0.00 0.00 0.00 4.40
855 861 1.073177 GCATGCTTGTTGGTGAATGC 58.927 50.000 11.37 0.00 34.28 3.56
865 871 1.339824 CCTTGGAGAGAGCATGCTTGT 60.340 52.381 23.61 12.74 0.00 3.16
888 894 3.698463 ACACTAACACGCACGCGC 61.698 61.111 12.02 0.00 44.19 6.86
970 976 1.677217 GCAGGTCTTTCGGCTCATCTT 60.677 52.381 0.00 0.00 0.00 2.40
983 989 2.309755 TCCATTGATTGAAGGCAGGTCT 59.690 45.455 0.00 0.00 0.00 3.85
1039 1048 1.959042 CTCACATTATGCTCCGCCTT 58.041 50.000 0.00 0.00 0.00 4.35
1170 1179 0.475475 CCATGAAGGCCTGGCTGATA 59.525 55.000 19.68 3.68 0.00 2.15
1348 3216 8.082242 GTCTAAGCACATCCAACAATAGTTTTT 58.918 33.333 0.00 0.00 35.28 1.94
1356 3224 4.350368 TCAGTCTAAGCACATCCAACAA 57.650 40.909 0.00 0.00 0.00 2.83
1360 3228 3.273434 GCATTCAGTCTAAGCACATCCA 58.727 45.455 0.00 0.00 0.00 3.41
1361 3229 3.273434 TGCATTCAGTCTAAGCACATCC 58.727 45.455 0.00 0.00 0.00 3.51
1404 7442 1.591594 CGCACAACGTCTCCAGTGT 60.592 57.895 0.00 0.00 36.87 3.55
1661 7705 2.936919 TGACCATGTTCTTGCTCTGT 57.063 45.000 0.00 0.00 0.00 3.41
1725 7769 2.432628 GACGGTGAAGAGCCACGG 60.433 66.667 0.00 0.00 41.36 4.94
1787 7831 0.405198 ACACAGGAATCCACATGGCA 59.595 50.000 0.61 0.00 34.44 4.92
1886 7930 6.031964 AGAGATAACTTGAGGATAGGGACA 57.968 41.667 0.00 0.00 0.00 4.02
1954 7998 8.673711 GTCCACAACTGAAACTGCATAATATAA 58.326 33.333 0.00 0.00 0.00 0.98
2685 8799 1.227118 GGCTAGAAGAGGCGACAGC 60.227 63.158 0.00 0.00 41.55 4.40
2864 8980 8.240267 AGGCAATAGTTTTAGTAAACCAAACA 57.760 30.769 0.00 0.00 43.77 2.83
2885 9001 1.764723 ACAGGATGATCAATCGAGGCA 59.235 47.619 0.00 0.00 39.69 4.75
3432 9947 0.745468 CCTCGGTAACCTCTACCTGC 59.255 60.000 0.00 0.00 35.49 4.85
3509 10079 6.608405 TGTGCCAGATTTTTAATCTCATGGAT 59.392 34.615 9.22 0.00 35.97 3.41
3579 10151 0.589223 TAAAACGCCGCAAACTCTGG 59.411 50.000 0.00 0.00 0.00 3.86
3628 10200 4.733077 TGTTCCACCCCTTTCATTCTTA 57.267 40.909 0.00 0.00 0.00 2.10
3642 10214 3.135994 ACGACACCAACTAATGTTCCAC 58.864 45.455 0.00 0.00 33.52 4.02
3658 10230 1.293963 CCTCCGACACGTCTACGACA 61.294 60.000 9.86 0.00 43.02 4.35
3659 10231 1.294659 ACCTCCGACACGTCTACGAC 61.295 60.000 9.86 0.00 43.02 4.34
3695 10267 3.002791 ACACGTCACTGCTATCATTTGG 58.997 45.455 0.00 0.00 0.00 3.28
3761 10570 1.378250 GCTGAGGCAGTGGCAGATT 60.378 57.895 20.04 0.00 43.71 2.40
3816 10636 7.220740 TCCATCAATACAGAACAACACTTGTA 58.779 34.615 0.00 0.00 44.59 2.41
3853 10681 7.975616 ACAAATACCATGTTTGCTATTGCTAAG 59.024 33.333 7.08 0.00 39.55 2.18
3855 10683 7.403312 ACAAATACCATGTTTGCTATTGCTA 57.597 32.000 7.08 0.00 39.55 3.49
3856 10684 6.284891 ACAAATACCATGTTTGCTATTGCT 57.715 33.333 7.08 0.00 39.55 3.91
3857 10685 9.912634 ATATACAAATACCATGTTTGCTATTGC 57.087 29.630 7.08 0.00 39.55 3.56
3860 10688 9.719355 TCGATATACAAATACCATGTTTGCTAT 57.281 29.630 7.08 5.42 39.55 2.97
3990 10870 8.375493 TCATGTTCCACTCTACCTTATAAACT 57.625 34.615 0.00 0.00 0.00 2.66
3998 10878 8.938883 ACAATATTATCATGTTCCACTCTACCT 58.061 33.333 0.00 0.00 0.00 3.08
3999 10879 9.209175 GACAATATTATCATGTTCCACTCTACC 57.791 37.037 0.00 0.00 0.00 3.18
4053 10933 7.219154 CGTGTCTAAAACAAAAACTGCATTGTA 59.781 33.333 3.94 0.00 40.31 2.41
4062 10942 7.184106 TGAGATGTCGTGTCTAAAACAAAAAC 58.816 34.615 0.00 0.00 40.31 2.43
4068 10948 4.806330 TCCTGAGATGTCGTGTCTAAAAC 58.194 43.478 0.00 0.00 0.00 2.43
4070 10950 4.523173 AGTTCCTGAGATGTCGTGTCTAAA 59.477 41.667 0.00 0.00 0.00 1.85
4071 10951 4.079970 AGTTCCTGAGATGTCGTGTCTAA 58.920 43.478 0.00 0.00 0.00 2.10
4072 10952 3.687125 AGTTCCTGAGATGTCGTGTCTA 58.313 45.455 0.00 0.00 0.00 2.59
4075 10955 4.079970 TCTAAGTTCCTGAGATGTCGTGT 58.920 43.478 0.00 0.00 0.00 4.49
4084 10964 9.442047 AGTTTTCATATTGTCTAAGTTCCTGAG 57.558 33.333 0.00 0.00 0.00 3.35
4137 11017 9.202273 GCAGTTCATATTGTATTTTTGTTTCCA 57.798 29.630 0.00 0.00 0.00 3.53
4149 11029 6.017026 TCGTTTTGTTGGCAGTTCATATTGTA 60.017 34.615 0.00 0.00 0.00 2.41
4208 11088 1.482182 CAGCTGTCCATAGGTGTAGCA 59.518 52.381 5.25 0.00 40.38 3.49
4256 11136 0.450184 TTGAATAAAGGCCGCTTCGC 59.550 50.000 0.00 0.00 0.00 4.70
4257 11137 3.603857 CGTATTGAATAAAGGCCGCTTCG 60.604 47.826 0.00 0.00 0.00 3.79
4258 11138 3.558418 TCGTATTGAATAAAGGCCGCTTC 59.442 43.478 0.00 0.00 0.00 3.86
4259 11139 3.537580 TCGTATTGAATAAAGGCCGCTT 58.462 40.909 0.00 0.00 0.00 4.68
4260 11140 3.188159 TCGTATTGAATAAAGGCCGCT 57.812 42.857 0.00 0.00 0.00 5.52
4261 11141 4.142966 GGTATCGTATTGAATAAAGGCCGC 60.143 45.833 0.00 0.00 0.00 6.53
4262 11142 4.992319 TGGTATCGTATTGAATAAAGGCCG 59.008 41.667 0.00 0.00 0.00 6.13
4263 11143 6.879458 AGATGGTATCGTATTGAATAAAGGCC 59.121 38.462 0.00 0.00 0.00 5.19
4264 11144 7.602644 TGAGATGGTATCGTATTGAATAAAGGC 59.397 37.037 0.00 0.00 0.00 4.35
4265 11145 9.489084 TTGAGATGGTATCGTATTGAATAAAGG 57.511 33.333 0.00 0.00 0.00 3.11
4267 11147 9.825109 TGTTGAGATGGTATCGTATTGAATAAA 57.175 29.630 0.00 0.00 0.00 1.40
4268 11148 9.825109 TTGTTGAGATGGTATCGTATTGAATAA 57.175 29.630 0.00 0.00 0.00 1.40
4269 11149 9.256477 GTTGTTGAGATGGTATCGTATTGAATA 57.744 33.333 0.00 0.00 0.00 1.75
4270 11150 7.987458 AGTTGTTGAGATGGTATCGTATTGAAT 59.013 33.333 0.00 0.00 0.00 2.57
4271 11151 7.277760 CAGTTGTTGAGATGGTATCGTATTGAA 59.722 37.037 0.00 0.00 0.00 2.69
4272 11152 6.756542 CAGTTGTTGAGATGGTATCGTATTGA 59.243 38.462 0.00 0.00 0.00 2.57
4273 11153 6.018751 CCAGTTGTTGAGATGGTATCGTATTG 60.019 42.308 0.00 0.00 0.00 1.90
4274 11154 6.049149 CCAGTTGTTGAGATGGTATCGTATT 58.951 40.000 0.00 0.00 0.00 1.89
4275 11155 5.601662 CCAGTTGTTGAGATGGTATCGTAT 58.398 41.667 0.00 0.00 0.00 3.06
4276 11156 4.679639 GCCAGTTGTTGAGATGGTATCGTA 60.680 45.833 0.00 0.00 35.17 3.43
4277 11157 3.861840 CCAGTTGTTGAGATGGTATCGT 58.138 45.455 0.00 0.00 0.00 3.73
4278 11158 2.609459 GCCAGTTGTTGAGATGGTATCG 59.391 50.000 0.00 0.00 35.17 2.92
4279 11159 3.375299 GTGCCAGTTGTTGAGATGGTATC 59.625 47.826 0.00 0.00 35.17 2.24
4280 11160 3.244875 TGTGCCAGTTGTTGAGATGGTAT 60.245 43.478 0.00 0.00 35.17 2.73
4281 11161 2.105649 TGTGCCAGTTGTTGAGATGGTA 59.894 45.455 0.00 0.00 35.17 3.25
4282 11162 1.133823 TGTGCCAGTTGTTGAGATGGT 60.134 47.619 0.00 0.00 35.17 3.55
4283 11163 1.608055 TGTGCCAGTTGTTGAGATGG 58.392 50.000 0.00 0.00 35.84 3.51
4284 11164 3.928727 AATGTGCCAGTTGTTGAGATG 57.071 42.857 0.00 0.00 0.00 2.90
4285 11165 4.942761 AAAATGTGCCAGTTGTTGAGAT 57.057 36.364 0.00 0.00 0.00 2.75
4286 11166 5.129634 TCTAAAATGTGCCAGTTGTTGAGA 58.870 37.500 0.00 0.00 0.00 3.27
4287 11167 5.437289 TCTAAAATGTGCCAGTTGTTGAG 57.563 39.130 0.00 0.00 0.00 3.02
4288 11168 5.843673 TTCTAAAATGTGCCAGTTGTTGA 57.156 34.783 0.00 0.00 0.00 3.18
4289 11169 6.215121 TCATTCTAAAATGTGCCAGTTGTTG 58.785 36.000 0.00 0.00 42.46 3.33
4290 11170 6.403866 TCATTCTAAAATGTGCCAGTTGTT 57.596 33.333 0.00 0.00 42.46 2.83
4291 11171 6.183360 TGTTCATTCTAAAATGTGCCAGTTGT 60.183 34.615 0.00 0.00 42.46 3.32
4292 11172 6.144402 GTGTTCATTCTAAAATGTGCCAGTTG 59.856 38.462 0.00 0.00 42.46 3.16
4293 11173 6.183360 TGTGTTCATTCTAAAATGTGCCAGTT 60.183 34.615 0.00 0.00 42.46 3.16
4294 11174 5.301551 TGTGTTCATTCTAAAATGTGCCAGT 59.698 36.000 0.00 0.00 42.46 4.00
4295 11175 5.630680 GTGTGTTCATTCTAAAATGTGCCAG 59.369 40.000 0.00 0.00 42.46 4.85
4296 11176 5.068329 TGTGTGTTCATTCTAAAATGTGCCA 59.932 36.000 0.00 0.00 42.46 4.92
4297 11177 5.527951 TGTGTGTTCATTCTAAAATGTGCC 58.472 37.500 0.00 0.00 42.46 5.01
4298 11178 6.074356 GGTTGTGTGTTCATTCTAAAATGTGC 60.074 38.462 0.00 0.00 42.46 4.57
4299 11179 6.977502 TGGTTGTGTGTTCATTCTAAAATGTG 59.022 34.615 0.00 0.00 42.46 3.21
4300 11180 7.106439 TGGTTGTGTGTTCATTCTAAAATGT 57.894 32.000 0.00 0.00 42.46 2.71
4301 11181 7.920151 TCTTGGTTGTGTGTTCATTCTAAAATG 59.080 33.333 0.00 0.00 43.10 2.32
4302 11182 8.006298 TCTTGGTTGTGTGTTCATTCTAAAAT 57.994 30.769 0.00 0.00 0.00 1.82
4303 11183 7.397892 TCTTGGTTGTGTGTTCATTCTAAAA 57.602 32.000 0.00 0.00 0.00 1.52
4304 11184 7.424803 CATCTTGGTTGTGTGTTCATTCTAAA 58.575 34.615 0.00 0.00 0.00 1.85
4305 11185 6.514870 GCATCTTGGTTGTGTGTTCATTCTAA 60.515 38.462 0.00 0.00 0.00 2.10
4306 11186 5.048782 GCATCTTGGTTGTGTGTTCATTCTA 60.049 40.000 0.00 0.00 0.00 2.10
4307 11187 4.261741 GCATCTTGGTTGTGTGTTCATTCT 60.262 41.667 0.00 0.00 0.00 2.40
4308 11188 3.983344 GCATCTTGGTTGTGTGTTCATTC 59.017 43.478 0.00 0.00 0.00 2.67
4309 11189 3.384146 TGCATCTTGGTTGTGTGTTCATT 59.616 39.130 0.00 0.00 0.00 2.57
4310 11190 2.957680 TGCATCTTGGTTGTGTGTTCAT 59.042 40.909 0.00 0.00 0.00 2.57
4311 11191 2.098934 GTGCATCTTGGTTGTGTGTTCA 59.901 45.455 0.00 0.00 0.00 3.18
4312 11192 2.098934 TGTGCATCTTGGTTGTGTGTTC 59.901 45.455 0.00 0.00 0.00 3.18
4313 11193 2.098614 TGTGCATCTTGGTTGTGTGTT 58.901 42.857 0.00 0.00 0.00 3.32
4314 11194 1.405105 GTGTGCATCTTGGTTGTGTGT 59.595 47.619 0.00 0.00 0.00 3.72
4315 11195 1.597690 CGTGTGCATCTTGGTTGTGTG 60.598 52.381 0.00 0.00 0.00 3.82
4316 11196 0.662619 CGTGTGCATCTTGGTTGTGT 59.337 50.000 0.00 0.00 0.00 3.72
4317 11197 0.943673 TCGTGTGCATCTTGGTTGTG 59.056 50.000 0.00 0.00 0.00 3.33
4318 11198 1.229428 CTCGTGTGCATCTTGGTTGT 58.771 50.000 0.00 0.00 0.00 3.32
4319 11199 1.069703 CACTCGTGTGCATCTTGGTTG 60.070 52.381 4.47 0.00 37.38 3.77
4320 11200 1.202639 TCACTCGTGTGCATCTTGGTT 60.203 47.619 12.66 0.00 43.49 3.67
4321 11201 0.392706 TCACTCGTGTGCATCTTGGT 59.607 50.000 12.66 0.00 43.49 3.67
4322 11202 1.730501 ATCACTCGTGTGCATCTTGG 58.269 50.000 12.66 0.00 43.49 3.61
4323 11203 3.187022 TCAAATCACTCGTGTGCATCTTG 59.813 43.478 12.66 11.81 43.49 3.02
4324 11204 3.402110 TCAAATCACTCGTGTGCATCTT 58.598 40.909 12.66 1.63 43.49 2.40
4325 11205 3.044235 TCAAATCACTCGTGTGCATCT 57.956 42.857 12.66 0.00 43.49 2.90
4326 11206 4.346734 AATCAAATCACTCGTGTGCATC 57.653 40.909 12.66 0.00 43.49 3.91
4327 11207 4.937620 ACTAATCAAATCACTCGTGTGCAT 59.062 37.500 12.66 5.01 43.49 3.96
4328 11208 4.152223 CACTAATCAAATCACTCGTGTGCA 59.848 41.667 12.66 2.89 43.49 4.57
4329 11209 4.641954 CACTAATCAAATCACTCGTGTGC 58.358 43.478 12.66 0.00 43.49 4.57
4330 11210 4.436050 GGCACTAATCAAATCACTCGTGTG 60.436 45.833 11.32 11.32 45.07 3.82
4331 11211 3.684788 GGCACTAATCAAATCACTCGTGT 59.315 43.478 0.00 0.00 0.00 4.49
4332 11212 3.935203 AGGCACTAATCAAATCACTCGTG 59.065 43.478 0.00 0.00 36.02 4.35
4333 11213 4.184629 GAGGCACTAATCAAATCACTCGT 58.815 43.478 0.00 0.00 41.55 4.18
4334 11214 3.557595 GGAGGCACTAATCAAATCACTCG 59.442 47.826 0.00 0.00 41.55 4.18
4335 11215 3.879892 GGGAGGCACTAATCAAATCACTC 59.120 47.826 0.00 0.00 41.55 3.51
4336 11216 3.525199 AGGGAGGCACTAATCAAATCACT 59.475 43.478 0.00 0.00 41.55 3.41
4337 11217 3.891049 AGGGAGGCACTAATCAAATCAC 58.109 45.455 0.00 0.00 41.55 3.06
4338 11218 4.272489 CAAGGGAGGCACTAATCAAATCA 58.728 43.478 0.00 0.00 41.55 2.57
4339 11219 3.067320 GCAAGGGAGGCACTAATCAAATC 59.933 47.826 0.00 0.00 41.55 2.17
4340 11220 3.026694 GCAAGGGAGGCACTAATCAAAT 58.973 45.455 0.00 0.00 41.55 2.32
4341 11221 2.041620 AGCAAGGGAGGCACTAATCAAA 59.958 45.455 0.00 0.00 41.55 2.69
4342 11222 1.635487 AGCAAGGGAGGCACTAATCAA 59.365 47.619 0.00 0.00 41.55 2.57
4343 11223 1.065199 CAGCAAGGGAGGCACTAATCA 60.065 52.381 0.00 0.00 41.55 2.57
4344 11224 1.065126 ACAGCAAGGGAGGCACTAATC 60.065 52.381 0.00 0.00 41.55 1.75
4345 11225 0.995024 ACAGCAAGGGAGGCACTAAT 59.005 50.000 0.00 0.00 41.55 1.73
4346 11226 0.324943 GACAGCAAGGGAGGCACTAA 59.675 55.000 0.00 0.00 41.55 2.24
4347 11227 1.553690 GGACAGCAAGGGAGGCACTA 61.554 60.000 0.00 0.00 41.55 2.74
4349 11229 2.360475 GGACAGCAAGGGAGGCAC 60.360 66.667 0.00 0.00 0.00 5.01
4350 11230 2.853542 TGGACAGCAAGGGAGGCA 60.854 61.111 0.00 0.00 0.00 4.75
4351 11231 2.045536 CTGGACAGCAAGGGAGGC 60.046 66.667 0.00 0.00 0.00 4.70
4352 11232 1.601171 CTCTGGACAGCAAGGGAGG 59.399 63.158 0.00 0.00 0.00 4.30
4353 11233 1.078567 GCTCTGGACAGCAAGGGAG 60.079 63.158 0.00 0.00 39.43 4.30
4354 11234 0.252239 TAGCTCTGGACAGCAAGGGA 60.252 55.000 0.00 0.00 42.40 4.20
4355 11235 0.615331 TTAGCTCTGGACAGCAAGGG 59.385 55.000 0.00 0.00 42.40 3.95
4356 11236 2.479566 TTTAGCTCTGGACAGCAAGG 57.520 50.000 0.00 0.00 42.40 3.61
4357 11237 6.690194 AATAATTTAGCTCTGGACAGCAAG 57.310 37.500 0.00 0.00 42.40 4.01
4358 11238 7.466746 AAAATAATTTAGCTCTGGACAGCAA 57.533 32.000 0.00 0.00 42.40 3.91
4359 11239 7.466746 AAAAATAATTTAGCTCTGGACAGCA 57.533 32.000 0.00 0.00 42.40 4.41
4384 11264 9.566432 CCTTGAACAATTAATTAGGCTCTCTAT 57.434 33.333 0.00 0.00 0.00 1.98
4385 11265 8.548877 ACCTTGAACAATTAATTAGGCTCTCTA 58.451 33.333 12.11 0.00 0.00 2.43
4386 11266 7.337942 CACCTTGAACAATTAATTAGGCTCTCT 59.662 37.037 12.11 0.00 0.00 3.10
4387 11267 7.336931 TCACCTTGAACAATTAATTAGGCTCTC 59.663 37.037 12.11 0.74 0.00 3.20
4388 11268 7.175104 TCACCTTGAACAATTAATTAGGCTCT 58.825 34.615 12.11 0.00 0.00 4.09
4389 11269 7.391148 TCACCTTGAACAATTAATTAGGCTC 57.609 36.000 12.11 3.52 0.00 4.70
4390 11270 7.093771 CCTTCACCTTGAACAATTAATTAGGCT 60.094 37.037 12.11 0.00 32.21 4.58
4391 11271 7.035612 CCTTCACCTTGAACAATTAATTAGGC 58.964 38.462 12.11 1.51 32.21 3.93
4392 11272 8.348285 TCCTTCACCTTGAACAATTAATTAGG 57.652 34.615 11.01 11.01 32.21 2.69
4394 11274 9.974980 GTTTCCTTCACCTTGAACAATTAATTA 57.025 29.630 0.00 0.00 32.21 1.40
4395 11275 8.704668 AGTTTCCTTCACCTTGAACAATTAATT 58.295 29.630 0.00 0.00 32.21 1.40
4396 11276 8.143835 CAGTTTCCTTCACCTTGAACAATTAAT 58.856 33.333 0.00 0.00 32.21 1.40
4397 11277 7.417342 CCAGTTTCCTTCACCTTGAACAATTAA 60.417 37.037 0.00 0.00 32.21 1.40
4398 11278 6.040391 CCAGTTTCCTTCACCTTGAACAATTA 59.960 38.462 0.00 0.00 32.21 1.40
4399 11279 5.163416 CCAGTTTCCTTCACCTTGAACAATT 60.163 40.000 0.00 0.00 32.21 2.32
4400 11280 4.342092 CCAGTTTCCTTCACCTTGAACAAT 59.658 41.667 0.00 0.00 32.21 2.71
4401 11281 3.699038 CCAGTTTCCTTCACCTTGAACAA 59.301 43.478 0.00 0.00 32.21 2.83
4402 11282 3.287222 CCAGTTTCCTTCACCTTGAACA 58.713 45.455 0.00 0.00 32.21 3.18
4403 11283 2.623416 CCCAGTTTCCTTCACCTTGAAC 59.377 50.000 0.00 0.00 32.21 3.18
4404 11284 2.243736 ACCCAGTTTCCTTCACCTTGAA 59.756 45.455 0.00 0.00 34.79 2.69
4405 11285 1.850345 ACCCAGTTTCCTTCACCTTGA 59.150 47.619 0.00 0.00 0.00 3.02
4406 11286 2.364972 ACCCAGTTTCCTTCACCTTG 57.635 50.000 0.00 0.00 0.00 3.61
4407 11287 4.529716 TTTACCCAGTTTCCTTCACCTT 57.470 40.909 0.00 0.00 0.00 3.50
4408 11288 4.167307 TCTTTTACCCAGTTTCCTTCACCT 59.833 41.667 0.00 0.00 0.00 4.00
4409 11289 4.277672 GTCTTTTACCCAGTTTCCTTCACC 59.722 45.833 0.00 0.00 0.00 4.02
4410 11290 5.008712 CAGTCTTTTACCCAGTTTCCTTCAC 59.991 44.000 0.00 0.00 0.00 3.18
4411 11291 5.104277 TCAGTCTTTTACCCAGTTTCCTTCA 60.104 40.000 0.00 0.00 0.00 3.02
4412 11292 5.374071 TCAGTCTTTTACCCAGTTTCCTTC 58.626 41.667 0.00 0.00 0.00 3.46
4413 11293 5.382664 TCAGTCTTTTACCCAGTTTCCTT 57.617 39.130 0.00 0.00 0.00 3.36
4414 11294 5.382664 TTCAGTCTTTTACCCAGTTTCCT 57.617 39.130 0.00 0.00 0.00 3.36
4415 11295 5.505159 CGTTTCAGTCTTTTACCCAGTTTCC 60.505 44.000 0.00 0.00 0.00 3.13
4416 11296 5.505159 CCGTTTCAGTCTTTTACCCAGTTTC 60.505 44.000 0.00 0.00 0.00 2.78
4417 11297 4.337274 CCGTTTCAGTCTTTTACCCAGTTT 59.663 41.667 0.00 0.00 0.00 2.66
4418 11298 3.881089 CCGTTTCAGTCTTTTACCCAGTT 59.119 43.478 0.00 0.00 0.00 3.16
4419 11299 3.473625 CCGTTTCAGTCTTTTACCCAGT 58.526 45.455 0.00 0.00 0.00 4.00
4420 11300 2.225727 GCCGTTTCAGTCTTTTACCCAG 59.774 50.000 0.00 0.00 0.00 4.45
4421 11301 2.223745 GCCGTTTCAGTCTTTTACCCA 58.776 47.619 0.00 0.00 0.00 4.51
4422 11302 2.223745 TGCCGTTTCAGTCTTTTACCC 58.776 47.619 0.00 0.00 0.00 3.69
4423 11303 3.059120 GTCTGCCGTTTCAGTCTTTTACC 60.059 47.826 0.00 0.00 35.63 2.85
4424 11304 3.362693 CGTCTGCCGTTTCAGTCTTTTAC 60.363 47.826 0.00 0.00 35.63 2.01
4425 11305 2.798283 CGTCTGCCGTTTCAGTCTTTTA 59.202 45.455 0.00 0.00 35.63 1.52
4426 11306 1.597663 CGTCTGCCGTTTCAGTCTTTT 59.402 47.619 0.00 0.00 35.63 2.27
4427 11307 1.202486 TCGTCTGCCGTTTCAGTCTTT 60.202 47.619 0.00 0.00 37.94 2.52
4428 11308 0.387929 TCGTCTGCCGTTTCAGTCTT 59.612 50.000 0.00 0.00 37.94 3.01
4429 11309 0.603569 ATCGTCTGCCGTTTCAGTCT 59.396 50.000 0.00 0.00 37.94 3.24
4430 11310 1.390463 GAATCGTCTGCCGTTTCAGTC 59.610 52.381 0.00 0.00 42.26 3.51
4431 11311 1.270094 TGAATCGTCTGCCGTTTCAGT 60.270 47.619 1.01 0.00 45.46 3.41
4432 11312 1.428448 TGAATCGTCTGCCGTTTCAG 58.572 50.000 1.01 0.00 45.46 3.02
4434 11314 1.327764 GGATGAATCGTCTGCCGTTTC 59.672 52.381 2.19 0.00 42.76 2.78
4435 11315 1.338674 TGGATGAATCGTCTGCCGTTT 60.339 47.619 2.19 0.00 37.94 3.60
4436 11316 0.249120 TGGATGAATCGTCTGCCGTT 59.751 50.000 2.19 0.00 37.94 4.44
4437 11317 0.179100 CTGGATGAATCGTCTGCCGT 60.179 55.000 2.19 0.00 37.94 5.68
4438 11318 1.493950 GCTGGATGAATCGTCTGCCG 61.494 60.000 2.19 0.00 38.13 5.69
4439 11319 0.179062 AGCTGGATGAATCGTCTGCC 60.179 55.000 13.83 0.00 0.00 4.85
4440 11320 1.202510 AGAGCTGGATGAATCGTCTGC 60.203 52.381 0.00 7.49 0.00 4.26
4441 11321 2.886862 AGAGCTGGATGAATCGTCTG 57.113 50.000 0.00 0.00 0.00 3.51
4442 11322 3.894427 ACATAGAGCTGGATGAATCGTCT 59.106 43.478 10.68 0.00 0.00 4.18
4443 11323 4.022416 AGACATAGAGCTGGATGAATCGTC 60.022 45.833 10.68 0.00 0.00 4.20
4444 11324 3.894427 AGACATAGAGCTGGATGAATCGT 59.106 43.478 10.68 0.00 0.00 3.73
4445 11325 4.517952 AGACATAGAGCTGGATGAATCG 57.482 45.455 10.68 0.00 0.00 3.34
4486 11366 3.118149 AGGTCGGTGTGGAACTTTTAAGT 60.118 43.478 0.00 0.00 42.04 2.24
4487 11367 3.473625 AGGTCGGTGTGGAACTTTTAAG 58.526 45.455 0.00 0.00 38.04 1.85
4488 11368 3.564053 AGGTCGGTGTGGAACTTTTAA 57.436 42.857 0.00 0.00 38.04 1.52
4489 11369 4.686191 TTAGGTCGGTGTGGAACTTTTA 57.314 40.909 0.00 0.00 35.17 1.52
4490 11370 3.564053 TTAGGTCGGTGTGGAACTTTT 57.436 42.857 0.00 0.00 35.17 2.27
4491 11371 3.564053 TTTAGGTCGGTGTGGAACTTT 57.436 42.857 0.00 0.00 35.17 2.66
4492 11372 3.135167 TCTTTTAGGTCGGTGTGGAACTT 59.865 43.478 0.00 0.00 35.17 2.66
4493 11373 2.701951 TCTTTTAGGTCGGTGTGGAACT 59.298 45.455 0.00 0.00 37.76 3.01
4494 11374 3.116079 TCTTTTAGGTCGGTGTGGAAC 57.884 47.619 0.00 0.00 37.35 3.62
4495 11375 3.735591 CTTCTTTTAGGTCGGTGTGGAA 58.264 45.455 0.00 0.00 0.00 3.53
4496 11376 3.396260 CTTCTTTTAGGTCGGTGTGGA 57.604 47.619 0.00 0.00 0.00 4.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.