Multiple sequence alignment - TraesCS5B01G348100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G348100 chr5B 100.000 5483 0 0 574 6056 529488318 529493800 0.000000e+00 10126.0
1 TraesCS5B01G348100 chr5B 100.000 237 0 0 1 237 529487745 529487981 7.210000e-119 438.0
2 TraesCS5B01G348100 chr5B 88.136 59 3 2 3283 3337 517678398 517678340 3.920000e-07 67.6
3 TraesCS5B01G348100 chr5B 87.719 57 6 1 3282 3337 498839834 498839778 1.410000e-06 65.8
4 TraesCS5B01G348100 chr5D 94.885 2600 82 20 722 3283 435776082 435778668 0.000000e+00 4017.0
5 TraesCS5B01G348100 chr5D 90.950 2243 129 23 3339 5531 435778659 435780877 0.000000e+00 2950.0
6 TraesCS5B01G348100 chr5D 93.434 198 13 0 5855 6052 435781245 435781442 1.650000e-75 294.0
7 TraesCS5B01G348100 chr5D 90.086 232 5 12 1 231 435775582 435775796 9.930000e-73 285.0
8 TraesCS5B01G348100 chr5D 91.667 108 5 3 5756 5862 435781090 435781194 4.890000e-31 147.0
9 TraesCS5B01G348100 chr5D 100.000 30 0 0 704 733 435776050 435776079 8.480000e-04 56.5
10 TraesCS5B01G348100 chr5A 94.061 2593 105 20 704 3281 549573833 549576391 0.000000e+00 3890.0
11 TraesCS5B01G348100 chr5A 90.110 2174 146 25 3437 5574 549576618 549578758 0.000000e+00 2760.0
12 TraesCS5B01G348100 chr5A 89.700 233 11 6 9 231 549573119 549573348 9.930000e-73 285.0
13 TraesCS5B01G348100 chr7B 84.962 133 16 4 3447 3578 478472601 478472472 1.370000e-26 132.0
14 TraesCS5B01G348100 chr7B 88.136 59 3 2 3283 3337 723260940 723260882 3.920000e-07 67.6
15 TraesCS5B01G348100 chr7B 88.136 59 3 2 3283 3337 723420312 723420254 3.920000e-07 67.6
16 TraesCS5B01G348100 chr6D 85.507 69 8 2 3271 3337 392789824 392789892 3.030000e-08 71.3
17 TraesCS5B01G348100 chr3B 88.333 60 3 2 3282 3337 380682194 380682253 1.090000e-07 69.4
18 TraesCS5B01G348100 chr6B 88.136 59 3 3 3283 3337 136448144 136448086 3.920000e-07 67.6
19 TraesCS5B01G348100 chr3D 88.136 59 3 2 3283 3337 10291351 10291293 3.920000e-07 67.6
20 TraesCS5B01G348100 chr1B 87.719 57 6 1 3282 3337 38272834 38272778 1.410000e-06 65.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G348100 chr5B 529487745 529493800 6055 False 5282.000000 10126 100.000000 1 6056 2 chr5B.!!$F1 6055
1 TraesCS5B01G348100 chr5D 435775582 435781442 5860 False 1291.583333 4017 93.503667 1 6052 6 chr5D.!!$F1 6051
2 TraesCS5B01G348100 chr5A 549573119 549578758 5639 False 2311.666667 3890 91.290333 9 5574 3 chr5A.!!$F1 5565

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
625 858 0.104304 GTGATACAGTAGCCCCACCG 59.896 60.000 0.00 0.0 0.00 4.94 F
988 1294 1.219393 CCGCTTTCCAGACTCCTCC 59.781 63.158 0.00 0.0 0.00 4.30 F
1906 2219 1.138036 CCGCCGTCTGTATCGTTCA 59.862 57.895 0.00 0.0 0.00 3.18 F
2184 2497 0.178891 ATATGCCATCCTCCTCCCGT 60.179 55.000 0.00 0.0 0.00 5.28 F
2774 3099 1.133513 AGGTTGGTGAATTGCCTCACA 60.134 47.619 11.45 0.0 46.31 3.58 F
3310 3646 1.270907 ACAACAACAACAAAGCCCCA 58.729 45.000 0.00 0.0 0.00 4.96 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1709 2022 0.773644 GCCAGGTGGGTCATATCCAT 59.226 55.000 0.00 0.0 39.65 3.41 R
1916 2229 1.147153 GTAGCATCACTGGCCTCCC 59.853 63.158 3.32 0.0 0.00 4.30 R
3426 3777 1.269012 CATTGGCCCACTTCCACATT 58.731 50.000 0.00 0.0 32.45 2.71 R
3932 4408 2.679837 GTGTGCCTCAATATCACCACAG 59.320 50.000 0.00 0.0 34.32 3.66 R
4536 5029 0.179056 CCGTTTCCTCGGGCACATAT 60.179 55.000 0.00 0.0 45.88 1.78 R
5150 5643 0.034574 AATCGGGCCACTGTAATGCA 60.035 50.000 4.39 0.0 0.00 3.96 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 6.041409 TGGACAGAGAGATTATAAAGAGCAGG 59.959 42.308 0.00 0.00 0.00 4.85
32 33 6.418057 ACAGAGAGATTATAAAGAGCAGGG 57.582 41.667 0.00 0.00 0.00 4.45
33 34 5.306678 ACAGAGAGATTATAAAGAGCAGGGG 59.693 44.000 0.00 0.00 0.00 4.79
121 132 0.928229 GGCGTCAATGTACGGATGTC 59.072 55.000 7.18 0.00 43.06 3.06
171 185 4.200283 CGCGGCACTCTCTCCTCC 62.200 72.222 0.00 0.00 0.00 4.30
172 186 3.844090 GCGGCACTCTCTCCTCCC 61.844 72.222 0.00 0.00 0.00 4.30
173 187 2.043450 CGGCACTCTCTCCTCCCT 60.043 66.667 0.00 0.00 0.00 4.20
174 188 2.124693 CGGCACTCTCTCCTCCCTC 61.125 68.421 0.00 0.00 0.00 4.30
175 189 1.760480 GGCACTCTCTCCTCCCTCC 60.760 68.421 0.00 0.00 0.00 4.30
176 190 1.309688 GCACTCTCTCCTCCCTCCT 59.690 63.158 0.00 0.00 0.00 3.69
177 191 0.755327 GCACTCTCTCCTCCCTCCTC 60.755 65.000 0.00 0.00 0.00 3.71
178 192 0.465460 CACTCTCTCCTCCCTCCTCG 60.465 65.000 0.00 0.00 0.00 4.63
179 193 1.528309 CTCTCTCCTCCCTCCTCGC 60.528 68.421 0.00 0.00 0.00 5.03
180 194 1.994885 CTCTCTCCTCCCTCCTCGCT 61.995 65.000 0.00 0.00 0.00 4.93
185 199 2.277072 CTCCCTCCTCGCTCCTCA 59.723 66.667 0.00 0.00 0.00 3.86
231 256 2.951475 TTCCCCTGTCTTTGCGCGTT 62.951 55.000 8.43 0.00 0.00 4.84
232 257 2.252260 CCCTGTCTTTGCGCGTTG 59.748 61.111 8.43 0.00 0.00 4.10
234 259 2.252260 CTGTCTTTGCGCGTTGGG 59.748 61.111 8.43 0.00 0.00 4.12
235 260 2.515057 TGTCTTTGCGCGTTGGGT 60.515 55.556 8.43 0.00 0.00 4.51
591 616 3.820843 CCCACCACCATAGCCCCC 61.821 72.222 0.00 0.00 0.00 5.40
625 858 0.104304 GTGATACAGTAGCCCCACCG 59.896 60.000 0.00 0.00 0.00 4.94
649 885 3.330720 CCACTCCGCTTTCCCCCT 61.331 66.667 0.00 0.00 0.00 4.79
822 1111 2.452114 CCTCCAGTCCCCTCCACT 59.548 66.667 0.00 0.00 0.00 4.00
844 1135 1.967343 ATCCTCCTCCTCCACCTCCC 61.967 65.000 0.00 0.00 0.00 4.30
845 1136 2.041405 CTCCTCCTCCACCTCCCC 60.041 72.222 0.00 0.00 0.00 4.81
846 1137 3.695825 TCCTCCTCCACCTCCCCC 61.696 72.222 0.00 0.00 0.00 5.40
847 1138 3.700350 CCTCCTCCACCTCCCCCT 61.700 72.222 0.00 0.00 0.00 4.79
848 1139 2.366167 CTCCTCCACCTCCCCCTG 60.366 72.222 0.00 0.00 0.00 4.45
968 1274 4.412843 TGACCAAAGGGGAATAAAAGACC 58.587 43.478 0.00 0.00 41.15 3.85
978 1284 3.377485 GGAATAAAAGACCTCCGCTTTCC 59.623 47.826 0.00 0.00 34.68 3.13
988 1294 1.219393 CCGCTTTCCAGACTCCTCC 59.781 63.158 0.00 0.00 0.00 4.30
1581 1894 2.543635 GGGTACGGGTATGGTGGATAT 58.456 52.381 0.00 0.00 0.00 1.63
1734 2047 3.001406 GACCCACCTGGCTACGGT 61.001 66.667 0.00 0.00 37.83 4.83
1905 2218 2.228914 GCCGCCGTCTGTATCGTTC 61.229 63.158 0.00 0.00 0.00 3.95
1906 2219 1.138036 CCGCCGTCTGTATCGTTCA 59.862 57.895 0.00 0.00 0.00 3.18
1935 2248 1.147153 GGAGGCCAGTGATGCTACC 59.853 63.158 5.01 0.00 0.00 3.18
1965 2278 4.164988 ACCTTCTTCAATACCAGCTATGCT 59.835 41.667 0.00 0.00 40.77 3.79
2053 2366 0.249699 CTATTATGGTGACGGCGGCA 60.250 55.000 13.60 13.60 0.00 5.69
2055 2368 2.529454 ATTATGGTGACGGCGGCACA 62.529 55.000 42.39 29.66 37.99 4.57
2160 2473 4.025858 GCTGCTGCTCCACCTCCA 62.026 66.667 8.53 0.00 36.03 3.86
2184 2497 0.178891 ATATGCCATCCTCCTCCCGT 60.179 55.000 0.00 0.00 0.00 5.28
2460 2773 2.041115 GGCAAAGGAGGAAGGTCGC 61.041 63.158 0.00 0.00 0.00 5.19
2768 3093 3.559655 GGTTTCAAAGGTTGGTGAATTGC 59.440 43.478 0.00 0.00 33.90 3.56
2774 3099 1.133513 AGGTTGGTGAATTGCCTCACA 60.134 47.619 11.45 0.00 46.31 3.58
2842 3167 6.879400 ACATGTTTGCTAAGTTTTACCCAAA 58.121 32.000 0.00 0.00 0.00 3.28
2861 3186 2.283145 ATGCCAATCCAGTATCTGCC 57.717 50.000 0.00 0.00 0.00 4.85
3013 3338 9.716556 TCAGGAAGTTAAGGTATAGAATTCTCT 57.283 33.333 12.24 4.75 35.52 3.10
3052 3377 2.628178 TCTGAGGAACATTGTGAGTCGT 59.372 45.455 0.00 0.00 0.00 4.34
3057 3382 3.069586 AGGAACATTGTGAGTCGTGAGAA 59.930 43.478 0.00 0.00 45.01 2.87
3093 3418 4.655027 CAATGTGATTCCTCATGTTCACG 58.345 43.478 0.00 0.00 41.02 4.35
3104 3429 2.877786 TCATGTTCACGTTTCACATGCT 59.122 40.909 19.79 0.00 45.02 3.79
3106 3431 3.063670 TGTTCACGTTTCACATGCTTG 57.936 42.857 0.00 0.00 0.00 4.01
3175 3501 7.451255 AGTTTTGGATTTGTCCATTGTCTATGA 59.549 33.333 0.00 0.00 39.86 2.15
3192 3518 7.210174 TGTCTATGATACTGGCTGATTACAAC 58.790 38.462 0.00 0.00 0.00 3.32
3204 3530 4.876679 GCTGATTACAACTAGGAGTTTCCC 59.123 45.833 0.00 0.00 36.03 3.97
3257 3593 8.798153 GTTGTTGCAGCTAAAATTATGTATCAC 58.202 33.333 1.17 0.00 0.00 3.06
3302 3638 7.715265 AATTACAACAACAACAACAACAACA 57.285 28.000 0.00 0.00 0.00 3.33
3303 3639 7.715265 ATTACAACAACAACAACAACAACAA 57.285 28.000 0.00 0.00 0.00 2.83
3304 3640 7.534085 TTACAACAACAACAACAACAACAAA 57.466 28.000 0.00 0.00 0.00 2.83
3305 3641 6.042144 ACAACAACAACAACAACAACAAAG 57.958 33.333 0.00 0.00 0.00 2.77
3306 3642 4.723879 ACAACAACAACAACAACAAAGC 57.276 36.364 0.00 0.00 0.00 3.51
3307 3643 3.496507 ACAACAACAACAACAACAAAGCC 59.503 39.130 0.00 0.00 0.00 4.35
3308 3644 2.694213 ACAACAACAACAACAAAGCCC 58.306 42.857 0.00 0.00 0.00 5.19
3309 3645 2.006169 CAACAACAACAACAAAGCCCC 58.994 47.619 0.00 0.00 0.00 5.80
3310 3646 1.270907 ACAACAACAACAAAGCCCCA 58.729 45.000 0.00 0.00 0.00 4.96
3311 3647 1.625818 ACAACAACAACAAAGCCCCAA 59.374 42.857 0.00 0.00 0.00 4.12
3312 3648 2.039084 ACAACAACAACAAAGCCCCAAA 59.961 40.909 0.00 0.00 0.00 3.28
3313 3649 2.394930 ACAACAACAAAGCCCCAAAC 57.605 45.000 0.00 0.00 0.00 2.93
3314 3650 1.625818 ACAACAACAAAGCCCCAAACA 59.374 42.857 0.00 0.00 0.00 2.83
3315 3651 2.039084 ACAACAACAAAGCCCCAAACAA 59.961 40.909 0.00 0.00 0.00 2.83
3316 3652 2.677337 CAACAACAAAGCCCCAAACAAG 59.323 45.455 0.00 0.00 0.00 3.16
3317 3653 1.905894 ACAACAAAGCCCCAAACAAGT 59.094 42.857 0.00 0.00 0.00 3.16
3318 3654 2.304470 ACAACAAAGCCCCAAACAAGTT 59.696 40.909 0.00 0.00 0.00 2.66
3319 3655 2.677337 CAACAAAGCCCCAAACAAGTTG 59.323 45.455 0.00 0.00 36.94 3.16
3331 3667 5.223449 CAAACAAGTTGGGGTAGACTAGA 57.777 43.478 7.96 0.00 33.18 2.43
3332 3668 5.238583 CAAACAAGTTGGGGTAGACTAGAG 58.761 45.833 7.96 0.00 33.18 2.43
3333 3669 3.442076 ACAAGTTGGGGTAGACTAGAGG 58.558 50.000 7.96 0.00 0.00 3.69
3334 3670 3.181409 ACAAGTTGGGGTAGACTAGAGGT 60.181 47.826 7.96 0.00 0.00 3.85
3335 3671 3.103080 AGTTGGGGTAGACTAGAGGTG 57.897 52.381 0.00 0.00 0.00 4.00
3336 3672 2.653366 AGTTGGGGTAGACTAGAGGTGA 59.347 50.000 0.00 0.00 0.00 4.02
3337 3673 3.272551 AGTTGGGGTAGACTAGAGGTGAT 59.727 47.826 0.00 0.00 0.00 3.06
3560 4033 5.526111 GCTTAAGTATGATAGGAAACGCCAA 59.474 40.000 4.02 0.00 40.02 4.52
3611 4084 5.942236 TGCAGAAACTGAAAAGATCATAGCT 59.058 36.000 2.81 0.00 37.44 3.32
3775 4251 3.404899 TCCCTTAAAACAGTAACCTGCG 58.595 45.455 0.00 0.00 42.81 5.18
3799 4275 1.840635 ACCCCTATCTGTTTCCTGCTC 59.159 52.381 0.00 0.00 0.00 4.26
3915 4391 1.410153 CCTTTTTCTGCACTGCCTTGT 59.590 47.619 0.00 0.00 0.00 3.16
3932 4408 6.491394 TGCCTTGTAATATTGTTAATGCGAC 58.509 36.000 0.00 0.00 0.00 5.19
3935 4411 7.678690 GCCTTGTAATATTGTTAATGCGACTGT 60.679 37.037 0.00 0.00 0.00 3.55
3943 4419 4.765273 TGTTAATGCGACTGTGGTGATAT 58.235 39.130 0.00 0.00 0.00 1.63
4014 4490 4.137543 AGCACAAGGTTTCCTTCAGTAAG 58.862 43.478 0.00 0.00 42.67 2.34
4536 5029 0.889186 GGCTGCGGAAAGGAGTTGAA 60.889 55.000 0.00 0.00 40.77 2.69
4650 5143 2.920645 CGGCGTGGCGAGGATATCT 61.921 63.158 10.58 0.00 0.00 1.98
4773 5266 0.543749 GAATGGACAGGGACCTGAGG 59.456 60.000 24.31 0.00 46.30 3.86
4884 5377 1.957186 GTCCGCGCAGGTGTTACAA 60.957 57.895 8.75 0.00 41.99 2.41
4965 5458 0.460987 CGATGGAGACCTTCACTGCC 60.461 60.000 0.00 0.00 0.00 4.85
4968 5461 2.435059 GAGACCTTCACTGCCGCC 60.435 66.667 0.00 0.00 0.00 6.13
5066 5559 1.349688 TGTTCCGTAGCTTCCATGGTT 59.650 47.619 12.58 0.00 0.00 3.67
5084 5577 2.857748 GGTTTGTGTTTGCTGCTACAAC 59.142 45.455 9.18 6.41 33.25 3.32
5085 5578 3.506810 GTTTGTGTTTGCTGCTACAACA 58.493 40.909 9.18 8.59 33.25 3.33
5093 5586 1.134250 TGCTGCTACAACAGGACACAA 60.134 47.619 0.00 0.00 38.16 3.33
5098 5591 2.851195 CTACAACAGGACACAAGCCTT 58.149 47.619 0.00 0.00 32.12 4.35
5119 5612 3.781079 TGTCAGTGCAAAGAAAACTGG 57.219 42.857 0.00 0.00 41.34 4.00
5143 5636 3.944015 CCTGGTGATTCAGATTGGAACTC 59.056 47.826 0.00 0.00 36.93 3.01
5145 5638 5.246981 TGGTGATTCAGATTGGAACTCTT 57.753 39.130 0.00 0.00 0.00 2.85
5146 5639 6.373005 TGGTGATTCAGATTGGAACTCTTA 57.627 37.500 0.00 0.00 0.00 2.10
5147 5640 6.409704 TGGTGATTCAGATTGGAACTCTTAG 58.590 40.000 0.00 0.00 0.00 2.18
5148 5641 6.013379 TGGTGATTCAGATTGGAACTCTTAGT 60.013 38.462 0.00 0.00 0.00 2.24
5149 5642 6.314896 GGTGATTCAGATTGGAACTCTTAGTG 59.685 42.308 0.00 0.00 0.00 2.74
5150 5643 6.876257 GTGATTCAGATTGGAACTCTTAGTGT 59.124 38.462 0.00 0.00 0.00 3.55
5151 5644 6.875726 TGATTCAGATTGGAACTCTTAGTGTG 59.124 38.462 0.00 0.00 0.00 3.82
5152 5645 4.569943 TCAGATTGGAACTCTTAGTGTGC 58.430 43.478 0.00 0.00 0.00 4.57
5153 5646 4.040339 TCAGATTGGAACTCTTAGTGTGCA 59.960 41.667 0.00 0.00 0.00 4.57
5154 5647 4.940046 CAGATTGGAACTCTTAGTGTGCAT 59.060 41.667 0.00 0.00 0.00 3.96
5155 5648 5.413833 CAGATTGGAACTCTTAGTGTGCATT 59.586 40.000 0.00 0.00 0.00 3.56
5156 5649 6.595326 CAGATTGGAACTCTTAGTGTGCATTA 59.405 38.462 0.00 0.00 0.00 1.90
5158 5651 5.222079 TGGAACTCTTAGTGTGCATTACA 57.778 39.130 6.80 0.00 36.82 2.41
5164 5657 2.107950 TAGTGTGCATTACAGTGGCC 57.892 50.000 0.00 0.00 42.80 5.36
5186 5679 0.962356 ATTCTGGTGGCAGGCTTTCG 60.962 55.000 0.00 0.00 0.00 3.46
5190 5683 2.985847 GTGGCAGGCTTTCGGCTT 60.986 61.111 0.00 0.00 44.74 4.35
5198 5691 0.099436 GGCTTTCGGCTTATGCACTG 59.901 55.000 2.72 0.00 41.91 3.66
5199 5692 0.099436 GCTTTCGGCTTATGCACTGG 59.901 55.000 2.72 0.00 41.91 4.00
5200 5693 1.737838 CTTTCGGCTTATGCACTGGA 58.262 50.000 2.72 0.00 41.91 3.86
5201 5694 2.292267 CTTTCGGCTTATGCACTGGAT 58.708 47.619 2.72 0.00 41.91 3.41
5206 5699 2.289631 CGGCTTATGCACTGGATATCCA 60.290 50.000 23.17 23.17 41.96 3.41
5207 5700 3.077359 GGCTTATGCACTGGATATCCAC 58.923 50.000 20.98 11.81 40.32 4.02
5208 5701 3.496692 GGCTTATGCACTGGATATCCACA 60.497 47.826 20.98 17.09 40.32 4.17
5209 5702 4.330250 GCTTATGCACTGGATATCCACAT 58.670 43.478 20.98 22.15 39.11 3.21
5210 5703 4.763793 GCTTATGCACTGGATATCCACATT 59.236 41.667 23.93 9.91 39.11 2.71
5211 5704 5.242393 GCTTATGCACTGGATATCCACATTT 59.758 40.000 23.93 10.44 39.11 2.32
5212 5705 6.638096 TTATGCACTGGATATCCACATTTG 57.362 37.500 23.93 17.50 42.01 2.32
5213 5706 3.289836 TGCACTGGATATCCACATTTGG 58.710 45.455 20.98 12.17 45.56 3.28
5214 5707 2.624838 GCACTGGATATCCACATTTGGG 59.375 50.000 20.98 12.71 44.11 4.12
5215 5708 2.624838 CACTGGATATCCACATTTGGGC 59.375 50.000 20.98 0.00 44.11 5.36
5216 5709 2.515429 ACTGGATATCCACATTTGGGCT 59.485 45.455 20.98 0.00 44.11 5.19
5217 5710 3.052642 ACTGGATATCCACATTTGGGCTT 60.053 43.478 20.98 0.00 44.11 4.35
5218 5711 3.565307 TGGATATCCACATTTGGGCTTC 58.435 45.455 20.98 0.00 44.11 3.86
5219 5712 2.554032 GGATATCCACATTTGGGCTTCG 59.446 50.000 17.34 0.00 44.11 3.79
5220 5713 2.051334 TATCCACATTTGGGCTTCGG 57.949 50.000 0.00 0.00 44.11 4.30
5221 5714 0.684153 ATCCACATTTGGGCTTCGGG 60.684 55.000 0.00 0.00 44.11 5.14
5230 5723 4.483243 GGCTTCGGGGATGCCGAA 62.483 66.667 0.00 0.00 45.45 4.30
5237 5730 2.670148 GGGGATGCCGAACAGGTCT 61.670 63.158 0.00 0.00 43.70 3.85
5244 5737 1.371183 CCGAACAGGTCTGAGGCAA 59.629 57.895 4.84 0.00 34.51 4.52
5248 5741 0.250640 AACAGGTCTGAGGCAAGCTG 60.251 55.000 4.84 0.00 44.51 4.24
5250 5743 0.035881 CAGGTCTGAGGCAAGCTGAA 59.964 55.000 0.00 0.00 42.23 3.02
5260 5753 2.490903 AGGCAAGCTGAAACATGATGAC 59.509 45.455 0.00 0.00 0.00 3.06
5262 5755 3.119245 GGCAAGCTGAAACATGATGACAT 60.119 43.478 0.00 0.00 37.19 3.06
5273 5767 4.511527 ACATGATGACATCTCACCTTGTC 58.488 43.478 16.25 0.00 42.05 3.18
5280 5774 2.744202 ACATCTCACCTTGTCGAATTGC 59.256 45.455 0.00 0.00 0.00 3.56
5302 5799 4.199310 CGAATAGCCTTTGAGGATTGGAA 58.801 43.478 0.00 0.00 37.67 3.53
5303 5800 4.823989 CGAATAGCCTTTGAGGATTGGAAT 59.176 41.667 0.00 0.00 37.67 3.01
5306 5803 2.105766 GCCTTTGAGGATTGGAATGCT 58.894 47.619 0.00 0.00 37.67 3.79
5316 5813 1.324740 TTGGAATGCTGGCCATCTGC 61.325 55.000 5.51 7.32 40.23 4.26
5326 5825 2.113433 GCCATCTGCTCAGGCTGTG 61.113 63.158 15.27 13.56 44.92 3.66
5328 5827 2.125229 ATCTGCTCAGGCTGTGCG 60.125 61.111 29.62 24.28 39.51 5.34
5334 5833 2.922503 TCAGGCTGTGCGGGAGAA 60.923 61.111 15.27 0.00 0.00 2.87
5335 5834 2.435586 CAGGCTGTGCGGGAGAAG 60.436 66.667 6.28 0.00 0.00 2.85
5336 5835 2.925170 AGGCTGTGCGGGAGAAGT 60.925 61.111 0.00 0.00 0.00 3.01
5337 5836 2.032681 GGCTGTGCGGGAGAAGTT 59.967 61.111 0.00 0.00 0.00 2.66
5338 5837 2.328099 GGCTGTGCGGGAGAAGTTG 61.328 63.158 0.00 0.00 0.00 3.16
5339 5838 2.970974 GCTGTGCGGGAGAAGTTGC 61.971 63.158 0.00 0.00 0.00 4.17
5340 5839 1.302033 CTGTGCGGGAGAAGTTGCT 60.302 57.895 0.00 0.00 0.00 3.91
5341 5840 1.572085 CTGTGCGGGAGAAGTTGCTG 61.572 60.000 0.00 0.00 0.00 4.41
5342 5841 2.032528 TGCGGGAGAAGTTGCTGG 59.967 61.111 0.00 0.00 0.00 4.85
5343 5842 3.435186 GCGGGAGAAGTTGCTGGC 61.435 66.667 0.00 0.00 0.00 4.85
5355 5854 2.274760 GCTGGCAGGAGCAAGGAT 59.725 61.111 17.64 0.00 42.40 3.24
5375 5874 1.668419 ACTGCAGTGTGAACCAAGAC 58.332 50.000 20.97 0.00 0.00 3.01
5419 5920 3.426568 GGCGGCACAAGAGCACTC 61.427 66.667 3.07 0.00 35.83 3.51
5429 5930 3.869272 GAGCACTCGCGGCCAATG 61.869 66.667 6.13 0.00 45.49 2.82
5446 5958 0.260816 ATGCCTGATCCAAGCATGGT 59.739 50.000 8.03 0.00 45.20 3.55
5457 5969 2.045634 GCATGGTGCAGGAGAGCA 60.046 61.111 0.00 0.00 44.26 4.26
5475 5987 2.515429 AGCATGAGGGGTTTCCATACAT 59.485 45.455 0.00 0.00 38.24 2.29
5476 5988 3.721575 AGCATGAGGGGTTTCCATACATA 59.278 43.478 0.00 0.00 38.24 2.29
5477 5989 3.821033 GCATGAGGGGTTTCCATACATAC 59.179 47.826 0.00 0.00 38.24 2.39
5478 5990 4.688597 GCATGAGGGGTTTCCATACATACA 60.689 45.833 0.00 0.00 38.24 2.29
5479 5991 5.634118 CATGAGGGGTTTCCATACATACAT 58.366 41.667 0.00 0.00 38.24 2.29
5489 6002 9.567848 GGTTTCCATACATACATTGTGTAAAAG 57.432 33.333 0.00 0.00 39.48 2.27
5532 6048 2.747855 CCGGGCTTCAGAACTGCC 60.748 66.667 5.05 5.05 45.42 4.85
5535 6051 3.435186 GGCTTCAGAACTGCCGGC 61.435 66.667 22.73 22.73 37.11 6.13
5546 6062 3.056628 CTGCCGGCAGAAGAGTTAG 57.943 57.895 46.72 21.11 46.30 2.34
5551 6067 1.069358 CCGGCAGAAGAGTTAGATCCC 59.931 57.143 0.00 0.00 0.00 3.85
5556 6072 2.035632 AGAAGAGTTAGATCCCGCTGG 58.964 52.381 0.00 0.00 0.00 4.85
5558 6074 2.160721 AGAGTTAGATCCCGCTGGAA 57.839 50.000 0.00 0.00 45.98 3.53
5563 6079 0.681887 TAGATCCCGCTGGAACGTCA 60.682 55.000 0.00 0.00 45.98 4.35
5564 6080 1.144057 GATCCCGCTGGAACGTCAT 59.856 57.895 0.00 0.00 45.98 3.06
5567 6083 2.398554 CCCGCTGGAACGTCATTGG 61.399 63.158 0.00 0.00 0.00 3.16
5574 6090 1.270625 TGGAACGTCATTGGACAGACC 60.271 52.381 0.00 0.00 44.54 3.85
5575 6091 1.068474 GAACGTCATTGGACAGACCG 58.932 55.000 0.00 0.00 44.54 4.79
5593 6118 4.408821 GTGGCGGTCCCTGATGCA 62.409 66.667 0.00 0.00 0.00 3.96
5595 6120 4.101448 GGCGGTCCCTGATGCACT 62.101 66.667 0.00 0.00 0.00 4.40
5616 6141 4.857251 GGATACCCGGAGCTTGTG 57.143 61.111 0.73 0.00 0.00 3.33
5617 6142 2.208527 GGATACCCGGAGCTTGTGA 58.791 57.895 0.73 0.00 0.00 3.58
5618 6143 0.759346 GGATACCCGGAGCTTGTGAT 59.241 55.000 0.73 0.00 0.00 3.06
5619 6144 1.270358 GGATACCCGGAGCTTGTGATC 60.270 57.143 0.73 0.00 0.00 2.92
5620 6145 0.759346 ATACCCGGAGCTTGTGATCC 59.241 55.000 0.73 0.00 44.78 3.36
5621 6146 1.335132 TACCCGGAGCTTGTGATCCC 61.335 60.000 0.73 0.00 45.40 3.85
5622 6147 2.370445 CCCGGAGCTTGTGATCCCT 61.370 63.158 0.73 0.00 45.40 4.20
5623 6148 1.153289 CCGGAGCTTGTGATCCCTG 60.153 63.158 0.00 0.00 45.40 4.45
5624 6149 1.153289 CGGAGCTTGTGATCCCTGG 60.153 63.158 0.00 0.00 45.40 4.45
5625 6150 1.617018 CGGAGCTTGTGATCCCTGGA 61.617 60.000 0.00 0.00 45.40 3.86
5626 6151 0.179936 GGAGCTTGTGATCCCTGGAG 59.820 60.000 0.00 0.00 42.60 3.86
5627 6152 0.463474 GAGCTTGTGATCCCTGGAGC 60.463 60.000 0.00 0.00 0.00 4.70
5628 6153 1.452833 GCTTGTGATCCCTGGAGCC 60.453 63.158 0.00 0.00 0.00 4.70
5629 6154 1.993653 CTTGTGATCCCTGGAGCCA 59.006 57.895 0.00 0.00 0.00 4.75
5630 6155 0.107312 CTTGTGATCCCTGGAGCCAG 60.107 60.000 9.59 9.59 43.26 4.85
5659 6184 1.283793 GCATGGTCACATATGCGGC 59.716 57.895 1.58 0.00 40.09 6.53
5661 6186 1.597854 ATGGTCACATATGCGGCGG 60.598 57.895 9.78 0.00 34.99 6.13
5664 6189 4.214327 TCACATATGCGGCGGCGA 62.214 61.111 36.87 20.29 44.10 5.54
5711 6236 4.394712 CCGGGGCAGCGACTCTTT 62.395 66.667 0.00 0.00 0.00 2.52
5712 6237 2.815647 CGGGGCAGCGACTCTTTC 60.816 66.667 0.00 0.00 0.00 2.62
5713 6238 2.347490 GGGGCAGCGACTCTTTCA 59.653 61.111 0.00 0.00 0.00 2.69
5714 6239 1.743252 GGGGCAGCGACTCTTTCAG 60.743 63.158 0.00 0.00 0.00 3.02
5715 6240 1.004440 GGGCAGCGACTCTTTCAGT 60.004 57.895 0.00 0.00 38.45 3.41
5716 6241 0.603975 GGGCAGCGACTCTTTCAGTT 60.604 55.000 0.00 0.00 34.41 3.16
5717 6242 0.514691 GGCAGCGACTCTTTCAGTTG 59.485 55.000 0.00 0.00 39.38 3.16
5718 6243 1.221414 GCAGCGACTCTTTCAGTTGT 58.779 50.000 0.00 0.00 38.67 3.32
5719 6244 2.404215 GCAGCGACTCTTTCAGTTGTA 58.596 47.619 0.00 0.00 38.67 2.41
5722 6247 2.035961 AGCGACTCTTTCAGTTGTAGCA 59.964 45.455 0.00 0.00 38.67 3.49
5723 6248 2.996621 GCGACTCTTTCAGTTGTAGCAT 59.003 45.455 0.00 0.00 38.67 3.79
5724 6249 3.433615 GCGACTCTTTCAGTTGTAGCATT 59.566 43.478 0.00 0.00 38.67 3.56
5725 6250 4.667668 GCGACTCTTTCAGTTGTAGCATTG 60.668 45.833 0.00 0.00 38.67 2.82
5727 6252 5.633601 CGACTCTTTCAGTTGTAGCATTGTA 59.366 40.000 0.00 0.00 34.41 2.41
5729 6254 5.934625 ACTCTTTCAGTTGTAGCATTGTAGG 59.065 40.000 0.00 0.00 26.56 3.18
5730 6255 5.245531 TCTTTCAGTTGTAGCATTGTAGGG 58.754 41.667 0.00 0.00 0.00 3.53
5731 6256 4.634012 TTCAGTTGTAGCATTGTAGGGT 57.366 40.909 0.00 0.00 0.00 4.34
5732 6257 5.748670 TTCAGTTGTAGCATTGTAGGGTA 57.251 39.130 0.00 0.00 0.00 3.69
5733 6258 5.080969 TCAGTTGTAGCATTGTAGGGTAC 57.919 43.478 0.00 0.00 39.14 3.34
5734 6259 4.775780 TCAGTTGTAGCATTGTAGGGTACT 59.224 41.667 0.00 0.00 39.36 2.73
5735 6260 5.247564 TCAGTTGTAGCATTGTAGGGTACTT 59.752 40.000 0.00 0.00 39.36 2.24
5737 6262 5.247564 AGTTGTAGCATTGTAGGGTACTTGA 59.752 40.000 0.00 0.00 39.36 3.02
5738 6263 5.080969 TGTAGCATTGTAGGGTACTTGAC 57.919 43.478 0.00 0.00 39.36 3.18
5750 6275 4.608948 GGTACTTGACCCAGAGGATATG 57.391 50.000 0.00 0.00 43.25 1.78
5760 6285 3.197333 CCCAGAGGATATGTAGATGGCTG 59.803 52.174 0.00 0.00 33.47 4.85
5761 6286 3.837146 CCAGAGGATATGTAGATGGCTGT 59.163 47.826 0.00 0.00 0.00 4.40
5764 6289 2.828520 AGGATATGTAGATGGCTGTCGG 59.171 50.000 0.00 0.00 0.00 4.79
5765 6290 2.563179 GGATATGTAGATGGCTGTCGGT 59.437 50.000 0.00 0.00 0.00 4.69
5766 6291 3.367498 GGATATGTAGATGGCTGTCGGTC 60.367 52.174 0.00 0.00 0.00 4.79
5767 6292 1.485124 ATGTAGATGGCTGTCGGTCA 58.515 50.000 0.00 0.00 0.00 4.02
5768 6293 0.530744 TGTAGATGGCTGTCGGTCAC 59.469 55.000 0.00 0.00 29.70 3.67
5771 6296 2.607750 ATGGCTGTCGGTCACCCT 60.608 61.111 0.00 0.00 29.70 4.34
5795 6335 3.513680 AGGTTTTTGGTCGTTTGTTCC 57.486 42.857 0.00 0.00 0.00 3.62
5844 6384 6.832384 AGAAGATATGATTCAATTGGTGCAGT 59.168 34.615 5.42 0.00 0.00 4.40
5850 6390 3.902881 TTCAATTGGTGCAGTTGGTTT 57.097 38.095 5.42 0.00 33.02 3.27
5851 6391 3.176552 TCAATTGGTGCAGTTGGTTTG 57.823 42.857 5.42 0.00 33.02 2.93
5869 6467 6.386654 TGGTTTGTTTGTTGTTTTCTCTCTC 58.613 36.000 0.00 0.00 0.00 3.20
5871 6469 6.747739 GGTTTGTTTGTTGTTTTCTCTCTCTC 59.252 38.462 0.00 0.00 0.00 3.20
5873 6471 7.687941 TTGTTTGTTGTTTTCTCTCTCTCTT 57.312 32.000 0.00 0.00 0.00 2.85
5874 6472 7.687941 TGTTTGTTGTTTTCTCTCTCTCTTT 57.312 32.000 0.00 0.00 0.00 2.52
5875 6473 7.752695 TGTTTGTTGTTTTCTCTCTCTCTTTC 58.247 34.615 0.00 0.00 0.00 2.62
5886 6484 7.953005 TCTCTCTCTCTTTCTGTGTCATATT 57.047 36.000 0.00 0.00 0.00 1.28
5922 6520 1.279840 GTTGTGCCGTGTCTTCTGC 59.720 57.895 0.00 0.00 0.00 4.26
5926 6524 2.280797 GCCGTGTCTTCTGCACCA 60.281 61.111 0.00 0.00 33.61 4.17
5957 6555 1.067250 GCCGATCAGTGAGCCTCTC 59.933 63.158 2.13 0.00 0.00 3.20
5959 6557 0.754957 CCGATCAGTGAGCCTCTCCT 60.755 60.000 2.13 0.00 0.00 3.69
5978 6576 7.606456 CCTCTCCTGACTAATCTATCTGTCTAC 59.394 44.444 0.00 0.00 0.00 2.59
6052 6650 3.052082 CCTGGACGCACAAGCTGG 61.052 66.667 0.00 0.00 39.10 4.85
6053 6651 2.031012 CTGGACGCACAAGCTGGA 59.969 61.111 0.00 0.00 39.10 3.86
6054 6652 2.031012 TGGACGCACAAGCTGGAG 59.969 61.111 0.00 0.00 39.10 3.86
6055 6653 2.031163 GGACGCACAAGCTGGAGT 59.969 61.111 0.00 0.00 39.10 3.85
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
74 85 2.760385 GTGGAGGACGGAGGGGAG 60.760 72.222 0.00 0.00 0.00 4.30
160 174 1.919771 CGAGGAGGGAGGAGAGAGT 59.080 63.158 0.00 0.00 0.00 3.24
171 185 1.739049 GTGATGAGGAGCGAGGAGG 59.261 63.158 0.00 0.00 0.00 4.30
172 186 1.739049 GGTGATGAGGAGCGAGGAG 59.261 63.158 0.00 0.00 0.00 3.69
173 187 2.121538 CGGTGATGAGGAGCGAGGA 61.122 63.158 0.00 0.00 36.43 3.71
174 188 2.343163 GACGGTGATGAGGAGCGAGG 62.343 65.000 0.00 0.00 37.73 4.63
175 189 1.064946 GACGGTGATGAGGAGCGAG 59.935 63.158 0.00 0.00 37.73 5.03
176 190 2.761195 CGACGGTGATGAGGAGCGA 61.761 63.158 0.00 0.00 37.73 4.93
177 191 2.278206 CGACGGTGATGAGGAGCG 60.278 66.667 0.00 0.00 40.12 5.03
178 192 1.226717 GACGACGGTGATGAGGAGC 60.227 63.158 0.00 0.00 0.00 4.70
179 193 1.062685 CGACGACGGTGATGAGGAG 59.937 63.158 0.00 0.00 35.72 3.69
180 194 0.956902 TTCGACGACGGTGATGAGGA 60.957 55.000 7.55 0.00 40.21 3.71
185 199 2.679450 TGAAATTTCGACGACGGTGAT 58.321 42.857 13.34 0.00 40.21 3.06
594 619 1.755783 GTATCACTCGACCCGGGGT 60.756 63.158 27.92 21.21 39.44 4.95
595 620 1.735376 CTGTATCACTCGACCCGGGG 61.735 65.000 27.92 12.73 0.00 5.73
596 621 1.035932 ACTGTATCACTCGACCCGGG 61.036 60.000 22.25 22.25 0.00 5.73
597 622 1.602851 CTACTGTATCACTCGACCCGG 59.397 57.143 0.00 0.00 0.00 5.73
598 623 1.002684 GCTACTGTATCACTCGACCCG 60.003 57.143 0.00 0.00 0.00 5.28
599 624 1.337387 GGCTACTGTATCACTCGACCC 59.663 57.143 0.00 0.00 0.00 4.46
600 625 1.337387 GGGCTACTGTATCACTCGACC 59.663 57.143 0.00 0.00 0.00 4.79
601 626 1.337387 GGGGCTACTGTATCACTCGAC 59.663 57.143 0.00 0.00 0.00 4.20
602 627 1.064240 TGGGGCTACTGTATCACTCGA 60.064 52.381 0.00 0.00 0.00 4.04
603 628 1.067212 GTGGGGCTACTGTATCACTCG 59.933 57.143 0.00 0.00 0.00 4.18
604 629 1.413077 GGTGGGGCTACTGTATCACTC 59.587 57.143 0.00 0.00 0.00 3.51
631 867 3.647771 GGGGGAAAGCGGAGTGGT 61.648 66.667 0.00 0.00 0.00 4.16
698 939 4.783621 GTGGCAGCAGCGGATGGA 62.784 66.667 3.86 0.00 43.41 3.41
701 942 4.827087 CTCGTGGCAGCAGCGGAT 62.827 66.667 0.00 0.00 43.41 4.18
822 1111 1.231751 AGGTGGAGGAGGAGGATGGA 61.232 60.000 0.00 0.00 0.00 3.41
968 1274 0.174617 GAGGAGTCTGGAAAGCGGAG 59.825 60.000 0.00 0.00 0.00 4.63
1581 1894 1.390926 GTAGTCAGGTGGAGGGGGA 59.609 63.158 0.00 0.00 0.00 4.81
1702 2015 1.070601 TGGGTCATATCCATCACTGCG 59.929 52.381 0.00 0.00 0.00 5.18
1709 2022 0.773644 GCCAGGTGGGTCATATCCAT 59.226 55.000 0.00 0.00 39.65 3.41
1734 2047 2.045438 CCATAGCCACCAACGCCA 60.045 61.111 0.00 0.00 0.00 5.69
1833 2146 2.280592 GTTTGGACGGTGGCGTCT 60.281 61.111 0.00 0.00 38.76 4.18
1848 2161 4.397417 GCATAGCTGATGTTGAAGAAGGTT 59.603 41.667 0.00 0.00 37.90 3.50
1916 2229 1.147153 GTAGCATCACTGGCCTCCC 59.853 63.158 3.32 0.00 0.00 4.30
1935 2248 4.566004 TGGTATTGAAGAAGGTCTGAACG 58.434 43.478 0.00 0.00 0.00 3.95
1986 2299 3.350909 TTGCTCGTACGCTGCGGAT 62.351 57.895 26.95 8.80 0.00 4.18
1995 2308 1.805945 CTGAGGGCGTTGCTCGTAC 60.806 63.158 4.16 0.00 42.13 3.67
2021 2334 2.487265 CCATAATAGTGGACCCTGGCAC 60.487 54.545 0.00 0.00 42.02 5.01
2028 2341 2.805657 GCCGTCACCATAATAGTGGACC 60.806 54.545 0.00 0.00 42.02 4.46
2184 2497 2.741092 GGTGGCACGACTTCCTCA 59.259 61.111 12.17 0.00 0.00 3.86
2460 2773 1.556911 AGTTCATCCCCAGTACTGCTG 59.443 52.381 17.86 10.16 44.63 4.41
2768 3093 1.462283 CGTTTGACAGCAGATGTGAGG 59.538 52.381 0.00 0.00 44.17 3.86
2774 3099 2.146342 CAGAACCGTTTGACAGCAGAT 58.854 47.619 0.00 0.00 0.00 2.90
2842 3167 1.496001 TGGCAGATACTGGATTGGCAT 59.504 47.619 7.04 0.00 40.57 4.40
2861 3186 4.214119 GTCGGTATCCCACAAATCATCATG 59.786 45.833 0.00 0.00 0.00 3.07
3052 3377 8.801299 TCACATTGCCAAAATAAAGTATTCTCA 58.199 29.630 0.00 0.00 0.00 3.27
3057 3382 8.761689 AGGAATCACATTGCCAAAATAAAGTAT 58.238 29.630 0.00 0.00 0.00 2.12
3104 3429 6.000840 TCTGTACAGTAAATTGGATGCACAA 58.999 36.000 21.99 0.00 34.41 3.33
3106 3431 5.643777 ACTCTGTACAGTAAATTGGATGCAC 59.356 40.000 21.99 0.00 0.00 4.57
3175 3501 5.900123 ACTCCTAGTTGTAATCAGCCAGTAT 59.100 40.000 0.00 0.00 0.00 2.12
3226 3552 9.703892 ACATAATTTTAGCTGCAACAACAATAA 57.296 25.926 1.02 0.00 0.00 1.40
3276 3612 9.256477 TGTTGTTGTTGTTGTTGTTGTAATTAA 57.744 25.926 0.00 0.00 0.00 1.40
3277 3613 8.812147 TGTTGTTGTTGTTGTTGTTGTAATTA 57.188 26.923 0.00 0.00 0.00 1.40
3278 3614 7.715265 TGTTGTTGTTGTTGTTGTTGTAATT 57.285 28.000 0.00 0.00 0.00 1.40
3279 3615 7.715265 TTGTTGTTGTTGTTGTTGTTGTAAT 57.285 28.000 0.00 0.00 0.00 1.89
3280 3616 7.534085 TTTGTTGTTGTTGTTGTTGTTGTAA 57.466 28.000 0.00 0.00 0.00 2.41
3281 3617 6.292381 GCTTTGTTGTTGTTGTTGTTGTTGTA 60.292 34.615 0.00 0.00 0.00 2.41
3282 3618 5.503194 GCTTTGTTGTTGTTGTTGTTGTTGT 60.503 36.000 0.00 0.00 0.00 3.32
3283 3619 4.903016 GCTTTGTTGTTGTTGTTGTTGTTG 59.097 37.500 0.00 0.00 0.00 3.33
3284 3620 4.024472 GGCTTTGTTGTTGTTGTTGTTGTT 60.024 37.500 0.00 0.00 0.00 2.83
3285 3621 3.496507 GGCTTTGTTGTTGTTGTTGTTGT 59.503 39.130 0.00 0.00 0.00 3.32
3286 3622 3.120373 GGGCTTTGTTGTTGTTGTTGTTG 60.120 43.478 0.00 0.00 0.00 3.33
3287 3623 3.070748 GGGCTTTGTTGTTGTTGTTGTT 58.929 40.909 0.00 0.00 0.00 2.83
3288 3624 2.614229 GGGGCTTTGTTGTTGTTGTTGT 60.614 45.455 0.00 0.00 0.00 3.32
3289 3625 2.006169 GGGGCTTTGTTGTTGTTGTTG 58.994 47.619 0.00 0.00 0.00 3.33
3290 3626 1.625818 TGGGGCTTTGTTGTTGTTGTT 59.374 42.857 0.00 0.00 0.00 2.83
3291 3627 1.270907 TGGGGCTTTGTTGTTGTTGT 58.729 45.000 0.00 0.00 0.00 3.32
3292 3628 2.393271 TTGGGGCTTTGTTGTTGTTG 57.607 45.000 0.00 0.00 0.00 3.33
3293 3629 2.039084 TGTTTGGGGCTTTGTTGTTGTT 59.961 40.909 0.00 0.00 0.00 2.83
3294 3630 1.625818 TGTTTGGGGCTTTGTTGTTGT 59.374 42.857 0.00 0.00 0.00 3.32
3295 3631 2.393271 TGTTTGGGGCTTTGTTGTTG 57.607 45.000 0.00 0.00 0.00 3.33
3296 3632 2.304470 ACTTGTTTGGGGCTTTGTTGTT 59.696 40.909 0.00 0.00 0.00 2.83
3297 3633 1.905894 ACTTGTTTGGGGCTTTGTTGT 59.094 42.857 0.00 0.00 0.00 3.32
3298 3634 2.677337 CAACTTGTTTGGGGCTTTGTTG 59.323 45.455 0.00 0.00 0.00 3.33
3299 3635 2.984562 CAACTTGTTTGGGGCTTTGTT 58.015 42.857 0.00 0.00 0.00 2.83
3300 3636 2.689553 CAACTTGTTTGGGGCTTTGT 57.310 45.000 0.00 0.00 0.00 2.83
3309 3645 5.223449 TCTAGTCTACCCCAACTTGTTTG 57.777 43.478 0.00 0.00 34.63 2.93
3310 3646 4.286291 CCTCTAGTCTACCCCAACTTGTTT 59.714 45.833 0.00 0.00 0.00 2.83
3311 3647 3.838903 CCTCTAGTCTACCCCAACTTGTT 59.161 47.826 0.00 0.00 0.00 2.83
3312 3648 3.181409 ACCTCTAGTCTACCCCAACTTGT 60.181 47.826 0.00 0.00 0.00 3.16
3313 3649 3.195825 CACCTCTAGTCTACCCCAACTTG 59.804 52.174 0.00 0.00 0.00 3.16
3314 3650 3.077088 TCACCTCTAGTCTACCCCAACTT 59.923 47.826 0.00 0.00 0.00 2.66
3315 3651 2.653366 TCACCTCTAGTCTACCCCAACT 59.347 50.000 0.00 0.00 0.00 3.16
3316 3652 3.097342 TCACCTCTAGTCTACCCCAAC 57.903 52.381 0.00 0.00 0.00 3.77
3317 3653 4.348020 AATCACCTCTAGTCTACCCCAA 57.652 45.455 0.00 0.00 0.00 4.12
3318 3654 4.348020 AAATCACCTCTAGTCTACCCCA 57.652 45.455 0.00 0.00 0.00 4.96
3319 3655 5.695424 AAAAATCACCTCTAGTCTACCCC 57.305 43.478 0.00 0.00 0.00 4.95
3350 3686 9.216117 GTGGACCTATTCATAGCGTATTTATTT 57.784 33.333 0.00 0.00 0.00 1.40
3359 3695 4.876107 ACAAAAGTGGACCTATTCATAGCG 59.124 41.667 0.00 0.00 0.00 4.26
3426 3777 1.269012 CATTGGCCCACTTCCACATT 58.731 50.000 0.00 0.00 32.45 2.71
3560 4033 7.718753 CCTTTCTCATCTAATATTTGCAGGTCT 59.281 37.037 0.00 0.00 0.00 3.85
3775 4251 3.744660 CAGGAAACAGATAGGGGTATGC 58.255 50.000 0.00 0.00 0.00 3.14
3909 4385 6.632834 CAGTCGCATTAACAATATTACAAGGC 59.367 38.462 0.00 0.00 0.00 4.35
3915 4391 6.819146 TCACCACAGTCGCATTAACAATATTA 59.181 34.615 0.00 0.00 0.00 0.98
3932 4408 2.679837 GTGTGCCTCAATATCACCACAG 59.320 50.000 0.00 0.00 34.32 3.66
3935 4411 3.431673 TTGTGTGCCTCAATATCACCA 57.568 42.857 0.00 0.00 0.00 4.17
3943 4419 4.203226 TCACTGTTAATTGTGTGCCTCAA 58.797 39.130 9.55 0.00 35.82 3.02
4536 5029 0.179056 CCGTTTCCTCGGGCACATAT 60.179 55.000 0.00 0.00 45.88 1.78
4650 5143 1.000955 GCCTTGACGACTTCCTTCTCA 59.999 52.381 0.00 0.00 0.00 3.27
4773 5266 5.467035 TTTGTTCATCCTTTTCCATCACC 57.533 39.130 0.00 0.00 0.00 4.02
4965 5458 3.432252 CCTTATAAGTATTTGCGGAGGCG 59.568 47.826 11.50 0.00 44.10 5.52
4968 5461 7.378966 TGAGATCCTTATAAGTATTTGCGGAG 58.621 38.462 11.50 0.00 0.00 4.63
5066 5559 2.098934 CCTGTTGTAGCAGCAAACACAA 59.901 45.455 0.00 0.00 35.28 3.33
5084 5577 1.605710 CTGACAAAGGCTTGTGTCCTG 59.394 52.381 25.63 18.96 45.98 3.86
5085 5578 1.212935 ACTGACAAAGGCTTGTGTCCT 59.787 47.619 25.63 15.55 45.98 3.85
5098 5591 3.675775 GCCAGTTTTCTTTGCACTGACAA 60.676 43.478 0.02 0.00 40.43 3.18
5119 5612 1.064463 TCCAATCTGAATCACCAGGGC 60.064 52.381 0.00 0.00 34.99 5.19
5143 5636 2.420022 GGCCACTGTAATGCACACTAAG 59.580 50.000 0.00 0.00 32.33 2.18
5145 5638 1.339631 GGGCCACTGTAATGCACACTA 60.340 52.381 4.39 0.00 32.33 2.74
5146 5639 0.609131 GGGCCACTGTAATGCACACT 60.609 55.000 4.39 0.00 32.33 3.55
5147 5640 1.883021 GGGCCACTGTAATGCACAC 59.117 57.895 4.39 0.00 32.33 3.82
5148 5641 1.673993 CGGGCCACTGTAATGCACA 60.674 57.895 4.39 0.00 35.30 4.57
5149 5642 0.748005 ATCGGGCCACTGTAATGCAC 60.748 55.000 4.39 0.00 0.00 4.57
5150 5643 0.034574 AATCGGGCCACTGTAATGCA 60.035 50.000 4.39 0.00 0.00 3.96
5151 5644 0.663153 GAATCGGGCCACTGTAATGC 59.337 55.000 4.39 0.00 0.00 3.56
5152 5645 1.942657 CAGAATCGGGCCACTGTAATG 59.057 52.381 4.39 0.00 0.00 1.90
5153 5646 1.134098 CCAGAATCGGGCCACTGTAAT 60.134 52.381 4.39 0.00 0.00 1.89
5154 5647 0.251916 CCAGAATCGGGCCACTGTAA 59.748 55.000 4.39 0.00 0.00 2.41
5155 5648 0.907704 ACCAGAATCGGGCCACTGTA 60.908 55.000 4.39 0.00 0.00 2.74
5156 5649 2.224159 ACCAGAATCGGGCCACTGT 61.224 57.895 4.39 0.00 0.00 3.55
5158 5651 2.671070 CACCAGAATCGGGCCACT 59.329 61.111 4.39 0.00 0.00 4.00
5164 5657 2.825836 GCCTGCCACCAGAATCGG 60.826 66.667 0.00 0.00 41.77 4.18
5186 5679 3.423539 TGGATATCCAGTGCATAAGCC 57.576 47.619 20.98 0.00 42.01 4.35
5206 5699 0.684153 CATCCCCGAAGCCCAAATGT 60.684 55.000 0.00 0.00 0.00 2.71
5207 5700 2.019897 GCATCCCCGAAGCCCAAATG 62.020 60.000 0.00 0.00 0.00 2.32
5208 5701 1.758122 GCATCCCCGAAGCCCAAAT 60.758 57.895 0.00 0.00 0.00 2.32
5209 5702 2.362375 GCATCCCCGAAGCCCAAA 60.362 61.111 0.00 0.00 0.00 3.28
5210 5703 4.440829 GGCATCCCCGAAGCCCAA 62.441 66.667 0.00 0.00 40.10 4.12
5219 5712 2.124695 GACCTGTTCGGCATCCCC 60.125 66.667 0.00 0.00 35.61 4.81
5220 5713 1.450312 CAGACCTGTTCGGCATCCC 60.450 63.158 0.00 0.00 35.61 3.85
5221 5714 0.460987 CTCAGACCTGTTCGGCATCC 60.461 60.000 0.00 0.00 35.61 3.51
5230 5723 1.123861 TCAGCTTGCCTCAGACCTGT 61.124 55.000 0.00 0.00 0.00 4.00
5237 5730 2.275134 TCATGTTTCAGCTTGCCTCA 57.725 45.000 0.00 0.00 0.00 3.86
5244 5737 4.634883 GTGAGATGTCATCATGTTTCAGCT 59.365 41.667 15.20 0.00 34.36 4.24
5248 5741 5.413833 ACAAGGTGAGATGTCATCATGTTTC 59.586 40.000 15.20 4.10 41.86 2.78
5250 5743 4.914983 ACAAGGTGAGATGTCATCATGTT 58.085 39.130 15.20 0.00 41.86 2.71
5260 5753 2.222886 CGCAATTCGACAAGGTGAGATG 60.223 50.000 0.00 0.00 41.67 2.90
5262 5755 1.000394 TCGCAATTCGACAAGGTGAGA 60.000 47.619 0.00 0.00 43.16 3.27
5273 5767 3.546815 CCTCAAAGGCTATTCGCAATTCG 60.547 47.826 0.00 0.00 41.67 3.34
5280 5774 3.808728 TCCAATCCTCAAAGGCTATTCG 58.191 45.455 0.00 0.00 34.61 3.34
5287 5784 2.429610 CCAGCATTCCAATCCTCAAAGG 59.570 50.000 0.00 0.00 36.46 3.11
5302 5799 1.152943 CTGAGCAGATGGCCAGCAT 60.153 57.895 25.38 8.61 46.50 3.79
5303 5800 2.271173 CTGAGCAGATGGCCAGCA 59.729 61.111 25.38 0.00 46.50 4.41
5316 5813 2.849120 CTTCTCCCGCACAGCCTGAG 62.849 65.000 0.00 0.00 0.00 3.35
5323 5822 1.597854 CAGCAACTTCTCCCGCACA 60.598 57.895 0.00 0.00 0.00 4.57
5324 5823 2.328099 CCAGCAACTTCTCCCGCAC 61.328 63.158 0.00 0.00 0.00 5.34
5326 5825 3.435186 GCCAGCAACTTCTCCCGC 61.435 66.667 0.00 0.00 0.00 6.13
5328 5827 1.676967 CCTGCCAGCAACTTCTCCC 60.677 63.158 0.00 0.00 0.00 4.30
5338 5837 0.817229 GTATCCTTGCTCCTGCCAGC 60.817 60.000 0.00 0.00 40.13 4.85
5339 5838 0.835941 AGTATCCTTGCTCCTGCCAG 59.164 55.000 0.00 0.00 38.71 4.85
5340 5839 0.543277 CAGTATCCTTGCTCCTGCCA 59.457 55.000 0.00 0.00 38.71 4.92
5341 5840 0.817229 GCAGTATCCTTGCTCCTGCC 60.817 60.000 0.00 0.00 42.00 4.85
5342 5841 0.107508 TGCAGTATCCTTGCTCCTGC 60.108 55.000 0.00 0.00 46.64 4.85
5343 5842 1.209019 ACTGCAGTATCCTTGCTCCTG 59.791 52.381 20.16 0.00 42.02 3.86
5355 5854 2.801699 CGTCTTGGTTCACACTGCAGTA 60.802 50.000 21.20 0.18 0.00 2.74
5360 5859 1.502231 CCTCGTCTTGGTTCACACTG 58.498 55.000 0.00 0.00 0.00 3.66
5361 5860 0.249911 GCCTCGTCTTGGTTCACACT 60.250 55.000 0.00 0.00 0.00 3.55
5402 5903 3.426568 GAGTGCTCTTGTGCCGCC 61.427 66.667 0.00 0.00 0.00 6.13
5405 5906 3.782244 CGCGAGTGCTCTTGTGCC 61.782 66.667 0.00 0.00 39.65 5.01
5411 5912 4.087892 ATTGGCCGCGAGTGCTCT 62.088 61.111 8.23 0.00 39.65 4.09
5412 5913 3.869272 CATTGGCCGCGAGTGCTC 61.869 66.667 8.23 0.00 39.65 4.26
5429 5930 2.012902 GCACCATGCTTGGATCAGGC 62.013 60.000 24.48 14.57 46.92 4.85
5435 5936 1.001764 CTCCTGCACCATGCTTGGA 60.002 57.895 24.48 12.87 46.92 3.53
5437 5938 1.654954 GCTCTCCTGCACCATGCTTG 61.655 60.000 2.02 0.00 45.31 4.01
5443 5955 1.600638 CTCATGCTCTCCTGCACCA 59.399 57.895 0.00 0.00 46.33 4.17
5449 5961 0.915364 GAAACCCCTCATGCTCTCCT 59.085 55.000 0.00 0.00 0.00 3.69
5451 5963 0.620556 TGGAAACCCCTCATGCTCTC 59.379 55.000 0.00 0.00 35.38 3.20
5452 5964 1.302907 ATGGAAACCCCTCATGCTCT 58.697 50.000 0.00 0.00 35.38 4.09
5453 5965 2.092429 TGTATGGAAACCCCTCATGCTC 60.092 50.000 0.00 0.00 35.38 4.26
5454 5966 1.922447 TGTATGGAAACCCCTCATGCT 59.078 47.619 0.00 0.00 35.38 3.79
5457 5969 5.930209 ATGTATGTATGGAAACCCCTCAT 57.070 39.130 0.00 0.00 35.38 2.90
5493 6006 1.151668 GCATGACGACTGCTCTGTTT 58.848 50.000 0.00 0.00 36.68 2.83
5517 6030 2.747855 CCGGCAGTTCTGAAGCCC 60.748 66.667 13.24 3.68 45.56 5.19
5532 6048 1.269309 CGGGATCTAACTCTTCTGCCG 60.269 57.143 0.00 0.00 0.00 5.69
5535 6051 2.223923 CCAGCGGGATCTAACTCTTCTG 60.224 54.545 0.00 0.00 35.59 3.02
5543 6059 0.458669 GACGTTCCAGCGGGATCTAA 59.541 55.000 6.36 0.00 44.48 2.10
5545 6061 1.330655 ATGACGTTCCAGCGGGATCT 61.331 55.000 6.36 0.00 44.48 2.75
5546 6062 0.462047 AATGACGTTCCAGCGGGATC 60.462 55.000 6.36 5.03 44.48 3.36
5551 6067 0.948623 TGTCCAATGACGTTCCAGCG 60.949 55.000 0.00 0.00 44.86 5.18
5556 6072 1.068474 CGGTCTGTCCAATGACGTTC 58.932 55.000 0.00 0.00 44.86 3.95
5558 6074 1.292223 CCGGTCTGTCCAATGACGT 59.708 57.895 0.00 0.00 44.86 4.34
5563 6079 2.351276 GCCACCGGTCTGTCCAAT 59.649 61.111 2.59 0.00 35.57 3.16
5564 6080 4.308458 CGCCACCGGTCTGTCCAA 62.308 66.667 2.59 0.00 35.57 3.53
5574 6090 4.838152 CATCAGGGACCGCCACCG 62.838 72.222 0.00 0.00 35.15 4.94
5590 6115 2.063979 CCGGGTATCCCTCAGTGCA 61.064 63.158 0.00 0.00 42.67 4.57
5593 6118 1.457831 GCTCCGGGTATCCCTCAGT 60.458 63.158 0.00 0.00 42.67 3.41
5595 6120 1.048724 CAAGCTCCGGGTATCCCTCA 61.049 60.000 0.00 0.00 42.67 3.86
5600 6125 1.270358 GGATCACAAGCTCCGGGTATC 60.270 57.143 0.00 0.00 0.00 2.24
5602 6127 1.335132 GGGATCACAAGCTCCGGGTA 61.335 60.000 0.00 0.00 30.61 3.69
5605 6130 1.153289 CAGGGATCACAAGCTCCGG 60.153 63.158 0.00 0.00 30.61 5.14
5606 6131 1.153289 CCAGGGATCACAAGCTCCG 60.153 63.158 0.00 0.00 30.61 4.63
5607 6132 0.179936 CTCCAGGGATCACAAGCTCC 59.820 60.000 0.00 0.00 0.00 4.70
5608 6133 0.463474 GCTCCAGGGATCACAAGCTC 60.463 60.000 0.00 0.00 0.00 4.09
5609 6134 1.606531 GCTCCAGGGATCACAAGCT 59.393 57.895 0.00 0.00 0.00 3.74
5610 6135 1.452833 GGCTCCAGGGATCACAAGC 60.453 63.158 0.00 2.92 0.00 4.01
5611 6136 0.107312 CTGGCTCCAGGGATCACAAG 60.107 60.000 8.03 0.00 40.17 3.16
5612 6137 1.993653 CTGGCTCCAGGGATCACAA 59.006 57.895 8.03 0.00 40.17 3.33
5613 6138 3.731547 CTGGCTCCAGGGATCACA 58.268 61.111 8.03 0.00 40.17 3.58
5637 6162 1.181098 GCATATGTGACCATGCCCCC 61.181 60.000 4.29 0.00 41.36 5.40
5648 6173 3.268603 TTCGCCGCCGCATATGTG 61.269 61.111 9.39 9.39 34.03 3.21
5698 6223 0.514691 CAACTGAAAGAGTCGCTGCC 59.485 55.000 0.00 0.00 37.43 4.85
5699 6224 1.221414 ACAACTGAAAGAGTCGCTGC 58.779 50.000 0.00 0.00 37.43 5.25
5701 6226 2.035961 TGCTACAACTGAAAGAGTCGCT 59.964 45.455 0.00 0.00 36.09 4.93
5702 6227 2.404215 TGCTACAACTGAAAGAGTCGC 58.596 47.619 0.00 0.00 37.43 5.19
5703 6228 4.449068 ACAATGCTACAACTGAAAGAGTCG 59.551 41.667 0.00 0.00 37.43 4.18
5704 6229 5.931441 ACAATGCTACAACTGAAAGAGTC 57.069 39.130 0.00 0.00 37.43 3.36
5705 6230 5.934625 CCTACAATGCTACAACTGAAAGAGT 59.065 40.000 0.00 0.00 37.43 3.24
5706 6231 5.352569 CCCTACAATGCTACAACTGAAAGAG 59.647 44.000 0.00 0.00 37.43 2.85
5708 6233 5.003804 ACCCTACAATGCTACAACTGAAAG 58.996 41.667 0.00 0.00 42.29 2.62
5709 6234 4.980573 ACCCTACAATGCTACAACTGAAA 58.019 39.130 0.00 0.00 0.00 2.69
5710 6235 4.634012 ACCCTACAATGCTACAACTGAA 57.366 40.909 0.00 0.00 0.00 3.02
5711 6236 4.775780 AGTACCCTACAATGCTACAACTGA 59.224 41.667 0.00 0.00 0.00 3.41
5712 6237 5.086104 AGTACCCTACAATGCTACAACTG 57.914 43.478 0.00 0.00 0.00 3.16
5713 6238 5.247564 TCAAGTACCCTACAATGCTACAACT 59.752 40.000 0.00 0.00 0.00 3.16
5714 6239 5.350640 GTCAAGTACCCTACAATGCTACAAC 59.649 44.000 0.00 0.00 0.00 3.32
5715 6240 5.484715 GTCAAGTACCCTACAATGCTACAA 58.515 41.667 0.00 0.00 0.00 2.41
5716 6241 4.081309 GGTCAAGTACCCTACAATGCTACA 60.081 45.833 0.00 0.00 43.16 2.74
5717 6242 4.439968 GGTCAAGTACCCTACAATGCTAC 58.560 47.826 0.00 0.00 43.16 3.58
5718 6243 4.748277 GGTCAAGTACCCTACAATGCTA 57.252 45.455 0.00 0.00 43.16 3.49
5719 6244 3.629142 GGTCAAGTACCCTACAATGCT 57.371 47.619 0.00 0.00 43.16 3.79
5730 6255 6.069331 TCTACATATCCTCTGGGTCAAGTAC 58.931 44.000 0.00 0.00 0.00 2.73
5731 6256 6.275692 TCTACATATCCTCTGGGTCAAGTA 57.724 41.667 0.00 0.00 0.00 2.24
5732 6257 5.144159 TCTACATATCCTCTGGGTCAAGT 57.856 43.478 0.00 0.00 0.00 3.16
5733 6258 5.046735 CCATCTACATATCCTCTGGGTCAAG 60.047 48.000 0.00 0.00 0.00 3.02
5734 6259 4.840680 CCATCTACATATCCTCTGGGTCAA 59.159 45.833 0.00 0.00 0.00 3.18
5735 6260 4.420206 CCATCTACATATCCTCTGGGTCA 58.580 47.826 0.00 0.00 0.00 4.02
5737 6262 3.177228 GCCATCTACATATCCTCTGGGT 58.823 50.000 0.00 0.00 0.00 4.51
5738 6263 3.197333 CAGCCATCTACATATCCTCTGGG 59.803 52.174 0.00 0.00 0.00 4.45
5739 6264 3.837146 ACAGCCATCTACATATCCTCTGG 59.163 47.826 0.00 0.00 0.00 3.86
5740 6265 4.380339 CGACAGCCATCTACATATCCTCTG 60.380 50.000 0.00 0.00 0.00 3.35
5741 6266 3.761218 CGACAGCCATCTACATATCCTCT 59.239 47.826 0.00 0.00 0.00 3.69
5742 6267 3.119316 CCGACAGCCATCTACATATCCTC 60.119 52.174 0.00 0.00 0.00 3.71
5750 6275 0.179108 GGTGACCGACAGCCATCTAC 60.179 60.000 0.00 0.00 40.63 2.59
5764 6289 1.686587 CCAAAAACCTTCCAGGGTGAC 59.313 52.381 0.00 0.00 30.80 3.67
5765 6290 1.289530 ACCAAAAACCTTCCAGGGTGA 59.710 47.619 0.00 0.00 30.80 4.02
5766 6291 1.686587 GACCAAAAACCTTCCAGGGTG 59.313 52.381 0.00 0.00 30.80 4.61
5767 6292 1.752788 CGACCAAAAACCTTCCAGGGT 60.753 52.381 0.00 0.00 36.34 4.34
5768 6293 0.958822 CGACCAAAAACCTTCCAGGG 59.041 55.000 0.00 0.00 40.58 4.45
5771 6296 2.826725 ACAAACGACCAAAAACCTTCCA 59.173 40.909 0.00 0.00 0.00 3.53
5777 6317 3.840468 ACAGGAACAAACGACCAAAAAC 58.160 40.909 0.00 0.00 0.00 2.43
5844 6384 6.754193 AGAGAGAAAACAACAAACAAACCAA 58.246 32.000 0.00 0.00 0.00 3.67
5850 6390 7.607991 AGAAAGAGAGAGAGAAAACAACAAACA 59.392 33.333 0.00 0.00 0.00 2.83
5851 6391 7.907563 CAGAAAGAGAGAGAGAAAACAACAAAC 59.092 37.037 0.00 0.00 0.00 2.93
5869 6467 5.563842 GGCGAAAATATGACACAGAAAGAG 58.436 41.667 0.00 0.00 0.00 2.85
5871 6469 4.092821 TCGGCGAAAATATGACACAGAAAG 59.907 41.667 7.35 0.00 0.00 2.62
5873 6471 3.591023 TCGGCGAAAATATGACACAGAA 58.409 40.909 7.35 0.00 0.00 3.02
5874 6472 3.186909 CTCGGCGAAAATATGACACAGA 58.813 45.455 12.13 0.00 0.00 3.41
5875 6473 2.285834 GCTCGGCGAAAATATGACACAG 60.286 50.000 12.13 0.00 0.00 3.66
5905 6503 1.153269 TGCAGAAGACACGGCACAA 60.153 52.632 0.00 0.00 36.24 3.33
5926 6524 1.065199 TGATCGGCTTCAGCAAATCCT 60.065 47.619 0.30 0.00 44.36 3.24
5957 6555 5.413213 CGGGTAGACAGATAGATTAGTCAGG 59.587 48.000 0.00 0.00 33.56 3.86
5959 6557 5.938279 ACGGGTAGACAGATAGATTAGTCA 58.062 41.667 0.00 0.00 33.56 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.