Multiple sequence alignment - TraesCS5B01G347600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G347600 chr5B 100.000 3068 0 0 1 3068 528592278 528589211 0.000000e+00 5666
1 TraesCS5B01G347600 chr5B 100.000 105 0 0 2964 3068 30405092 30405196 8.680000e-46 195
2 TraesCS5B01G347600 chr5D 95.060 1984 64 11 718 2678 435279546 435277574 0.000000e+00 3090
3 TraesCS5B01G347600 chr5D 94.928 276 13 1 2678 2953 435277059 435276785 6.080000e-117 431
4 TraesCS5B01G347600 chr5A 95.048 1858 57 8 840 2678 549220430 549218589 0.000000e+00 2889
5 TraesCS5B01G347600 chr5A 94.928 276 14 0 2679 2954 549218179 549217904 1.690000e-117 433
6 TraesCS5B01G347600 chr6A 96.191 1339 42 1 1214 2543 573138745 573137407 0.000000e+00 2182
7 TraesCS5B01G347600 chr6A 95.396 934 42 1 1611 2543 615024985 615025918 0.000000e+00 1485
8 TraesCS5B01G347600 chr6A 92.533 375 19 2 1214 1579 615024613 615024987 2.090000e-146 529
9 TraesCS5B01G347600 chr2A 95.892 1339 46 1 1214 2543 561008636 561009974 0.000000e+00 2159
10 TraesCS5B01G347600 chr3A 95.000 1340 57 2 1214 2543 52208146 52206807 0.000000e+00 2095
11 TraesCS5B01G347600 chr6B 100.000 105 0 0 2964 3068 273227496 273227392 8.680000e-46 195
12 TraesCS5B01G347600 chr4B 100.000 105 0 0 2964 3068 519173122 519173226 8.680000e-46 195
13 TraesCS5B01G347600 chr4B 99.048 105 1 0 2964 3068 48329616 48329512 4.040000e-44 189
14 TraesCS5B01G347600 chr4B 99.048 105 1 0 2964 3068 177827825 177827721 4.040000e-44 189
15 TraesCS5B01G347600 chr4B 99.048 105 1 0 2964 3068 286792423 286792527 4.040000e-44 189
16 TraesCS5B01G347600 chr4B 99.048 105 1 0 2964 3068 298619450 298619346 4.040000e-44 189
17 TraesCS5B01G347600 chrUn 99.048 105 1 0 2964 3068 222091823 222091719 4.040000e-44 189
18 TraesCS5B01G347600 chrUn 99.048 105 1 0 2964 3068 404517057 404516953 4.040000e-44 189


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G347600 chr5B 528589211 528592278 3067 True 5666.0 5666 100.0000 1 3068 1 chr5B.!!$R1 3067
1 TraesCS5B01G347600 chr5D 435276785 435279546 2761 True 1760.5 3090 94.9940 718 2953 2 chr5D.!!$R1 2235
2 TraesCS5B01G347600 chr5A 549217904 549220430 2526 True 1661.0 2889 94.9880 840 2954 2 chr5A.!!$R1 2114
3 TraesCS5B01G347600 chr6A 573137407 573138745 1338 True 2182.0 2182 96.1910 1214 2543 1 chr6A.!!$R1 1329
4 TraesCS5B01G347600 chr6A 615024613 615025918 1305 False 1007.0 1485 93.9645 1214 2543 2 chr6A.!!$F1 1329
5 TraesCS5B01G347600 chr2A 561008636 561009974 1338 False 2159.0 2159 95.8920 1214 2543 1 chr2A.!!$F1 1329
6 TraesCS5B01G347600 chr3A 52206807 52208146 1339 True 2095.0 2095 95.0000 1214 2543 1 chr3A.!!$R1 1329

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
359 360 0.030195 TGAGGAGCCCCATGATGGTA 60.030 55.0 11.09 0.0 35.17 3.25 F
625 626 0.037160 GGGGTGGCCGAGAAGTTTAA 59.963 55.0 0.00 0.0 0.00 1.52 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1971 2031 0.037232 ACTTGGCGCTCAGGTACTTC 60.037 55.000 7.64 0.0 34.6 3.01 R
2474 2535 2.618794 TCATGGCAAAAAGGGAATGGT 58.381 42.857 0.00 0.0 0.0 3.55 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 46 9.435688 AATTTATGAACATTAAGGTTTCCTTGC 57.564 29.630 6.98 0.00 44.44 4.01
46 47 4.864704 TGAACATTAAGGTTTCCTTGCC 57.135 40.909 6.98 0.00 44.44 4.52
47 48 4.219115 TGAACATTAAGGTTTCCTTGCCA 58.781 39.130 6.98 0.00 44.44 4.92
48 49 4.651503 TGAACATTAAGGTTTCCTTGCCAA 59.348 37.500 6.98 0.00 44.44 4.52
49 50 5.129485 TGAACATTAAGGTTTCCTTGCCAAA 59.871 36.000 6.98 0.00 44.44 3.28
50 51 5.622346 ACATTAAGGTTTCCTTGCCAAAA 57.378 34.783 10.82 0.00 44.44 2.44
51 52 5.995446 ACATTAAGGTTTCCTTGCCAAAAA 58.005 33.333 10.82 0.00 44.44 1.94
73 74 8.934507 AAAAATCACACCGTTCTTTAAAATGA 57.065 26.923 0.00 0.00 0.00 2.57
74 75 9.541143 AAAAATCACACCGTTCTTTAAAATGAT 57.459 25.926 0.00 0.00 0.00 2.45
75 76 8.519492 AAATCACACCGTTCTTTAAAATGATG 57.481 30.769 0.00 0.00 0.00 3.07
76 77 6.627395 TCACACCGTTCTTTAAAATGATGT 57.373 33.333 0.00 0.00 0.00 3.06
77 78 7.033530 TCACACCGTTCTTTAAAATGATGTT 57.966 32.000 0.00 0.00 0.00 2.71
78 79 7.136119 TCACACCGTTCTTTAAAATGATGTTC 58.864 34.615 0.00 0.00 0.00 3.18
79 80 6.915300 CACACCGTTCTTTAAAATGATGTTCA 59.085 34.615 0.00 0.00 0.00 3.18
80 81 7.433719 CACACCGTTCTTTAAAATGATGTTCAA 59.566 33.333 0.00 0.00 0.00 2.69
81 82 7.434013 ACACCGTTCTTTAAAATGATGTTCAAC 59.566 33.333 0.00 0.00 0.00 3.18
82 83 7.647715 CACCGTTCTTTAAAATGATGTTCAACT 59.352 33.333 0.00 0.00 0.00 3.16
83 84 8.842280 ACCGTTCTTTAAAATGATGTTCAACTA 58.158 29.630 0.00 0.00 0.00 2.24
84 85 9.840427 CCGTTCTTTAAAATGATGTTCAACTAT 57.160 29.630 0.00 0.00 0.00 2.12
93 94 9.829507 AAAATGATGTTCAACTATGTCCAAAAA 57.170 25.926 0.00 0.00 0.00 1.94
95 96 8.991243 ATGATGTTCAACTATGTCCAAAAATG 57.009 30.769 0.00 0.00 0.00 2.32
96 97 6.867816 TGATGTTCAACTATGTCCAAAAATGC 59.132 34.615 0.00 0.00 0.00 3.56
97 98 6.403866 TGTTCAACTATGTCCAAAAATGCT 57.596 33.333 0.00 0.00 0.00 3.79
98 99 6.215121 TGTTCAACTATGTCCAAAAATGCTG 58.785 36.000 0.00 0.00 0.00 4.41
99 100 6.040278 TGTTCAACTATGTCCAAAAATGCTGA 59.960 34.615 0.00 0.00 0.00 4.26
100 101 6.839124 TCAACTATGTCCAAAAATGCTGAT 57.161 33.333 0.00 0.00 0.00 2.90
101 102 7.936496 TCAACTATGTCCAAAAATGCTGATA 57.064 32.000 0.00 0.00 0.00 2.15
102 103 7.988737 TCAACTATGTCCAAAAATGCTGATAG 58.011 34.615 0.00 0.00 0.00 2.08
103 104 7.828717 TCAACTATGTCCAAAAATGCTGATAGA 59.171 33.333 0.00 0.00 0.00 1.98
104 105 8.461222 CAACTATGTCCAAAAATGCTGATAGAA 58.539 33.333 0.00 0.00 0.00 2.10
105 106 7.989826 ACTATGTCCAAAAATGCTGATAGAAC 58.010 34.615 0.00 0.00 0.00 3.01
106 107 7.831193 ACTATGTCCAAAAATGCTGATAGAACT 59.169 33.333 0.00 0.00 0.00 3.01
107 108 6.500684 TGTCCAAAAATGCTGATAGAACTC 57.499 37.500 0.00 0.00 0.00 3.01
108 109 6.003326 TGTCCAAAAATGCTGATAGAACTCA 58.997 36.000 0.00 0.00 0.00 3.41
109 110 6.489700 TGTCCAAAAATGCTGATAGAACTCAA 59.510 34.615 0.00 0.00 0.00 3.02
110 111 7.177216 TGTCCAAAAATGCTGATAGAACTCAAT 59.823 33.333 0.00 0.00 0.00 2.57
111 112 8.031277 GTCCAAAAATGCTGATAGAACTCAATT 58.969 33.333 0.00 0.00 0.00 2.32
112 113 8.030692 TCCAAAAATGCTGATAGAACTCAATTG 58.969 33.333 0.00 0.00 0.00 2.32
113 114 8.030692 CCAAAAATGCTGATAGAACTCAATTGA 58.969 33.333 8.12 8.12 0.00 2.57
114 115 9.414295 CAAAAATGCTGATAGAACTCAATTGAA 57.586 29.630 9.88 0.00 0.00 2.69
115 116 9.985730 AAAAATGCTGATAGAACTCAATTGAAA 57.014 25.926 9.88 0.00 0.00 2.69
117 118 9.798994 AAATGCTGATAGAACTCAATTGAAATC 57.201 29.630 9.88 10.35 0.00 2.17
118 119 7.325660 TGCTGATAGAACTCAATTGAAATCC 57.674 36.000 9.88 0.00 0.00 3.01
119 120 6.885918 TGCTGATAGAACTCAATTGAAATCCA 59.114 34.615 9.88 0.51 0.00 3.41
120 121 7.558807 TGCTGATAGAACTCAATTGAAATCCAT 59.441 33.333 9.88 5.34 0.00 3.41
121 122 8.074972 GCTGATAGAACTCAATTGAAATCCATC 58.925 37.037 9.88 13.54 0.00 3.51
122 123 9.117183 CTGATAGAACTCAATTGAAATCCATCA 57.883 33.333 20.10 20.10 0.00 3.07
123 124 9.117183 TGATAGAACTCAATTGAAATCCATCAG 57.883 33.333 18.67 5.86 0.00 2.90
124 125 6.770746 AGAACTCAATTGAAATCCATCAGG 57.229 37.500 9.88 0.00 0.00 3.86
125 126 5.655532 AGAACTCAATTGAAATCCATCAGGG 59.344 40.000 9.88 0.00 34.83 4.45
133 134 4.679500 TCCATCAGGGACCCACAA 57.321 55.556 14.60 0.00 42.15 3.33
134 135 2.875704 TCCATCAGGGACCCACAAA 58.124 52.632 14.60 0.00 42.15 2.83
135 136 1.153539 TCCATCAGGGACCCACAAAA 58.846 50.000 14.60 0.00 42.15 2.44
136 137 1.501170 TCCATCAGGGACCCACAAAAA 59.499 47.619 14.60 0.00 42.15 1.94
173 174 7.403312 TTTTTCAAGAGAAAGTTCATCCACA 57.597 32.000 0.00 0.00 44.03 4.17
174 175 7.403312 TTTTCAAGAGAAAGTTCATCCACAA 57.597 32.000 0.00 0.00 44.03 3.33
175 176 7.587037 TTTCAAGAGAAAGTTCATCCACAAT 57.413 32.000 0.00 0.00 38.76 2.71
176 177 6.564709 TCAAGAGAAAGTTCATCCACAATG 57.435 37.500 0.00 0.00 36.65 2.82
177 178 6.298361 TCAAGAGAAAGTTCATCCACAATGA 58.702 36.000 0.00 0.00 42.76 2.57
178 179 6.944290 TCAAGAGAAAGTTCATCCACAATGAT 59.056 34.615 0.00 0.00 43.87 2.45
179 180 6.754702 AGAGAAAGTTCATCCACAATGATG 57.245 37.500 0.00 0.00 43.87 3.07
180 181 6.243900 AGAGAAAGTTCATCCACAATGATGT 58.756 36.000 0.00 0.00 43.87 3.06
181 182 6.718454 AGAGAAAGTTCATCCACAATGATGTT 59.282 34.615 0.00 0.00 43.87 2.71
182 183 6.684686 AGAAAGTTCATCCACAATGATGTTG 58.315 36.000 0.00 0.00 43.87 3.33
183 184 6.266103 AGAAAGTTCATCCACAATGATGTTGT 59.734 34.615 0.00 0.00 43.87 3.32
184 185 6.409524 AAGTTCATCCACAATGATGTTGTT 57.590 33.333 0.00 0.00 43.87 2.83
185 186 6.409524 AGTTCATCCACAATGATGTTGTTT 57.590 33.333 0.00 0.00 43.87 2.83
186 187 7.523293 AGTTCATCCACAATGATGTTGTTTA 57.477 32.000 0.00 0.00 43.87 2.01
187 188 8.125978 AGTTCATCCACAATGATGTTGTTTAT 57.874 30.769 0.00 0.00 43.87 1.40
188 189 9.241919 AGTTCATCCACAATGATGTTGTTTATA 57.758 29.630 0.00 0.00 43.87 0.98
191 192 9.406113 TCATCCACAATGATGTTGTTTATATCA 57.594 29.630 0.00 0.00 42.24 2.15
194 195 8.136800 TCCACAATGATGTTGTTTATATCATGC 58.863 33.333 0.00 0.00 39.82 4.06
195 196 7.383029 CCACAATGATGTTGTTTATATCATGCC 59.617 37.037 0.00 0.00 39.82 4.40
196 197 7.921745 CACAATGATGTTGTTTATATCATGCCA 59.078 33.333 0.00 0.00 39.82 4.92
197 198 8.476447 ACAATGATGTTGTTTATATCATGCCAA 58.524 29.630 0.00 0.00 39.82 4.52
198 199 9.483916 CAATGATGTTGTTTATATCATGCCAAT 57.516 29.630 0.00 0.00 39.82 3.16
199 200 9.483916 AATGATGTTGTTTATATCATGCCAATG 57.516 29.630 0.00 0.00 39.82 2.82
200 201 7.435305 TGATGTTGTTTATATCATGCCAATGG 58.565 34.615 0.00 0.00 34.30 3.16
231 232 9.639601 ATTAAACTAAAAGTTAGCATCAAAGCC 57.360 29.630 0.00 0.00 37.47 4.35
232 233 6.648879 AACTAAAAGTTAGCATCAAAGCCA 57.351 33.333 0.00 0.00 36.52 4.75
233 234 6.013842 ACTAAAAGTTAGCATCAAAGCCAC 57.986 37.500 0.00 0.00 34.23 5.01
234 235 5.770162 ACTAAAAGTTAGCATCAAAGCCACT 59.230 36.000 0.00 0.00 34.23 4.00
235 236 4.773323 AAAGTTAGCATCAAAGCCACTC 57.227 40.909 0.00 0.00 34.23 3.51
236 237 2.716217 AGTTAGCATCAAAGCCACTCC 58.284 47.619 0.00 0.00 34.23 3.85
237 238 2.307098 AGTTAGCATCAAAGCCACTCCT 59.693 45.455 0.00 0.00 34.23 3.69
238 239 3.084786 GTTAGCATCAAAGCCACTCCTT 58.915 45.455 0.00 0.00 34.23 3.36
239 240 2.299326 AGCATCAAAGCCACTCCTTT 57.701 45.000 0.00 0.00 35.52 3.11
240 241 2.165998 AGCATCAAAGCCACTCCTTTC 58.834 47.619 0.00 0.00 32.97 2.62
241 242 2.165998 GCATCAAAGCCACTCCTTTCT 58.834 47.619 0.00 0.00 32.97 2.52
242 243 3.009473 AGCATCAAAGCCACTCCTTTCTA 59.991 43.478 0.00 0.00 32.97 2.10
243 244 3.127721 GCATCAAAGCCACTCCTTTCTAC 59.872 47.826 0.00 0.00 32.97 2.59
244 245 4.326826 CATCAAAGCCACTCCTTTCTACA 58.673 43.478 0.00 0.00 32.97 2.74
245 246 4.640771 TCAAAGCCACTCCTTTCTACAT 57.359 40.909 0.00 0.00 32.97 2.29
246 247 4.326826 TCAAAGCCACTCCTTTCTACATG 58.673 43.478 0.00 0.00 32.97 3.21
247 248 4.074970 CAAAGCCACTCCTTTCTACATGT 58.925 43.478 2.69 2.69 32.97 3.21
248 249 3.618690 AGCCACTCCTTTCTACATGTC 57.381 47.619 0.00 0.00 0.00 3.06
249 250 2.906389 AGCCACTCCTTTCTACATGTCA 59.094 45.455 0.00 0.00 0.00 3.58
250 251 3.327757 AGCCACTCCTTTCTACATGTCAA 59.672 43.478 0.00 0.00 0.00 3.18
251 252 4.072131 GCCACTCCTTTCTACATGTCAAA 58.928 43.478 0.00 1.96 0.00 2.69
252 253 4.518970 GCCACTCCTTTCTACATGTCAAAA 59.481 41.667 0.00 3.44 0.00 2.44
253 254 5.183904 GCCACTCCTTTCTACATGTCAAAAT 59.816 40.000 0.00 0.00 0.00 1.82
254 255 6.374333 GCCACTCCTTTCTACATGTCAAAATA 59.626 38.462 0.00 0.00 0.00 1.40
255 256 7.094377 GCCACTCCTTTCTACATGTCAAAATAA 60.094 37.037 0.00 0.00 0.00 1.40
256 257 8.960591 CCACTCCTTTCTACATGTCAAAATAAT 58.039 33.333 0.00 0.00 0.00 1.28
295 296 9.730420 ACAATTTTATGTTCCATAAGAATACGC 57.270 29.630 0.00 0.00 36.69 4.42
296 297 9.950680 CAATTTTATGTTCCATAAGAATACGCT 57.049 29.630 0.00 0.00 36.69 5.07
297 298 9.950680 AATTTTATGTTCCATAAGAATACGCTG 57.049 29.630 0.00 0.00 36.69 5.18
298 299 6.539649 TTATGTTCCATAAGAATACGCTGC 57.460 37.500 0.00 0.00 36.69 5.25
299 300 2.863740 TGTTCCATAAGAATACGCTGCG 59.136 45.455 21.91 21.91 36.69 5.18
300 301 1.497991 TCCATAAGAATACGCTGCGC 58.502 50.000 23.51 0.00 0.00 6.09
301 302 1.068588 TCCATAAGAATACGCTGCGCT 59.931 47.619 23.51 11.93 0.00 5.92
302 303 1.867233 CCATAAGAATACGCTGCGCTT 59.133 47.619 23.51 18.43 0.00 4.68
303 304 2.096713 CCATAAGAATACGCTGCGCTTC 60.097 50.000 23.51 22.97 0.00 3.86
304 305 2.287393 TAAGAATACGCTGCGCTTCA 57.713 45.000 28.07 13.93 0.00 3.02
305 306 1.438651 AAGAATACGCTGCGCTTCAA 58.561 45.000 28.07 11.02 0.00 2.69
306 307 1.656652 AGAATACGCTGCGCTTCAAT 58.343 45.000 28.07 13.93 0.00 2.57
307 308 1.594862 AGAATACGCTGCGCTTCAATC 59.405 47.619 28.07 16.97 0.00 2.67
308 309 1.327460 GAATACGCTGCGCTTCAATCA 59.673 47.619 23.51 0.00 0.00 2.57
309 310 1.586422 ATACGCTGCGCTTCAATCAT 58.414 45.000 23.51 1.17 0.00 2.45
310 311 2.217429 TACGCTGCGCTTCAATCATA 57.783 45.000 23.51 0.08 0.00 2.15
311 312 1.586422 ACGCTGCGCTTCAATCATAT 58.414 45.000 23.51 0.00 0.00 1.78
312 313 1.528586 ACGCTGCGCTTCAATCATATC 59.471 47.619 23.51 0.00 0.00 1.63
313 314 1.797046 CGCTGCGCTTCAATCATATCT 59.203 47.619 9.88 0.00 0.00 1.98
314 315 2.989166 CGCTGCGCTTCAATCATATCTA 59.011 45.455 9.88 0.00 0.00 1.98
315 316 3.060496 CGCTGCGCTTCAATCATATCTAG 59.940 47.826 9.88 0.00 0.00 2.43
316 317 3.181522 GCTGCGCTTCAATCATATCTAGC 60.182 47.826 9.73 0.00 0.00 3.42
317 318 4.244066 CTGCGCTTCAATCATATCTAGCT 58.756 43.478 9.73 0.00 0.00 3.32
318 319 4.240888 TGCGCTTCAATCATATCTAGCTC 58.759 43.478 9.73 0.00 0.00 4.09
319 320 4.021632 TGCGCTTCAATCATATCTAGCTCT 60.022 41.667 9.73 0.00 0.00 4.09
320 321 4.326817 GCGCTTCAATCATATCTAGCTCTG 59.673 45.833 0.00 0.00 0.00 3.35
321 322 5.468592 CGCTTCAATCATATCTAGCTCTGT 58.531 41.667 0.00 0.00 0.00 3.41
322 323 5.572511 CGCTTCAATCATATCTAGCTCTGTC 59.427 44.000 0.00 0.00 0.00 3.51
323 324 6.453943 GCTTCAATCATATCTAGCTCTGTCA 58.546 40.000 0.00 0.00 0.00 3.58
324 325 6.365789 GCTTCAATCATATCTAGCTCTGTCAC 59.634 42.308 0.00 0.00 0.00 3.67
325 326 6.006759 TCAATCATATCTAGCTCTGTCACG 57.993 41.667 0.00 0.00 0.00 4.35
326 327 5.048434 TCAATCATATCTAGCTCTGTCACGG 60.048 44.000 0.00 0.00 0.00 4.94
327 328 3.821748 TCATATCTAGCTCTGTCACGGT 58.178 45.455 0.00 0.00 0.00 4.83
328 329 3.815962 TCATATCTAGCTCTGTCACGGTC 59.184 47.826 0.00 0.00 0.00 4.79
329 330 1.018148 ATCTAGCTCTGTCACGGTCG 58.982 55.000 0.00 0.00 0.00 4.79
330 331 0.036671 TCTAGCTCTGTCACGGTCGA 60.037 55.000 0.00 0.00 0.00 4.20
331 332 0.803117 CTAGCTCTGTCACGGTCGAA 59.197 55.000 0.00 0.00 0.00 3.71
332 333 0.803117 TAGCTCTGTCACGGTCGAAG 59.197 55.000 0.00 0.00 0.00 3.79
333 334 0.889638 AGCTCTGTCACGGTCGAAGA 60.890 55.000 0.00 0.00 0.00 2.87
347 348 1.066858 TCGAAGACCACAATGAGGAGC 60.067 52.381 3.17 0.00 0.00 4.70
348 349 1.743996 GAAGACCACAATGAGGAGCC 58.256 55.000 3.17 0.00 0.00 4.70
349 350 0.329596 AAGACCACAATGAGGAGCCC 59.670 55.000 3.17 0.00 0.00 5.19
350 351 1.077429 GACCACAATGAGGAGCCCC 60.077 63.158 3.17 0.00 0.00 5.80
351 352 1.852157 ACCACAATGAGGAGCCCCA 60.852 57.895 3.17 0.00 33.88 4.96
352 353 1.217057 ACCACAATGAGGAGCCCCAT 61.217 55.000 3.17 0.00 33.88 4.00
353 354 0.754217 CCACAATGAGGAGCCCCATG 60.754 60.000 0.00 0.00 33.88 3.66
354 355 0.256752 CACAATGAGGAGCCCCATGA 59.743 55.000 0.00 0.00 33.88 3.07
355 356 1.133575 CACAATGAGGAGCCCCATGAT 60.134 52.381 0.00 0.00 33.88 2.45
356 357 1.133575 ACAATGAGGAGCCCCATGATG 60.134 52.381 0.00 0.00 33.88 3.07
357 358 0.481567 AATGAGGAGCCCCATGATGG 59.518 55.000 3.98 3.98 37.25 3.51
358 359 0.700269 ATGAGGAGCCCCATGATGGT 60.700 55.000 11.09 0.00 35.17 3.55
359 360 0.030195 TGAGGAGCCCCATGATGGTA 60.030 55.000 11.09 0.00 35.17 3.25
360 361 0.398318 GAGGAGCCCCATGATGGTAC 59.602 60.000 11.09 1.62 35.17 3.34
361 362 1.062488 AGGAGCCCCATGATGGTACC 61.062 60.000 11.09 4.43 35.17 3.34
362 363 1.352622 GGAGCCCCATGATGGTACCA 61.353 60.000 18.99 18.99 35.17 3.25
363 364 0.550914 GAGCCCCATGATGGTACCAA 59.449 55.000 20.76 3.13 35.17 3.67
364 365 0.258774 AGCCCCATGATGGTACCAAC 59.741 55.000 20.76 17.60 35.17 3.77
365 366 0.258774 GCCCCATGATGGTACCAACT 59.741 55.000 20.76 2.39 35.17 3.16
366 367 1.750682 GCCCCATGATGGTACCAACTC 60.751 57.143 20.76 13.73 35.17 3.01
367 368 1.563879 CCCCATGATGGTACCAACTCA 59.436 52.381 20.76 19.31 35.17 3.41
368 369 2.175499 CCCCATGATGGTACCAACTCAT 59.825 50.000 20.76 20.72 35.17 2.90
369 370 3.480470 CCCATGATGGTACCAACTCATC 58.520 50.000 22.72 14.87 35.17 2.92
370 371 3.137176 CCCATGATGGTACCAACTCATCT 59.863 47.826 22.72 4.92 35.17 2.90
371 372 4.384056 CCATGATGGTACCAACTCATCTC 58.616 47.826 22.72 13.61 35.76 2.75
372 373 4.384056 CATGATGGTACCAACTCATCTCC 58.616 47.826 22.72 5.29 35.76 3.71
373 374 2.771943 TGATGGTACCAACTCATCTCCC 59.228 50.000 20.76 0.00 35.76 4.30
374 375 2.335681 TGGTACCAACTCATCTCCCA 57.664 50.000 13.60 0.00 0.00 4.37
375 376 2.845659 TGGTACCAACTCATCTCCCAT 58.154 47.619 13.60 0.00 0.00 4.00
376 377 2.505407 TGGTACCAACTCATCTCCCATG 59.495 50.000 13.60 0.00 0.00 3.66
377 378 2.158755 GGTACCAACTCATCTCCCATGG 60.159 54.545 7.15 4.14 0.00 3.66
378 379 0.921896 ACCAACTCATCTCCCATGGG 59.078 55.000 26.30 26.30 32.21 4.00
379 380 0.184451 CCAACTCATCTCCCATGGGG 59.816 60.000 30.93 20.61 46.11 4.96
389 390 3.698765 CCATGGGGAGGCAACAAC 58.301 61.111 2.85 0.00 41.41 3.32
390 391 1.077265 CCATGGGGAGGCAACAACT 59.923 57.895 2.85 0.00 41.41 3.16
391 392 0.967380 CCATGGGGAGGCAACAACTC 60.967 60.000 2.85 0.00 41.41 3.01
392 393 0.251297 CATGGGGAGGCAACAACTCA 60.251 55.000 0.00 0.00 36.70 3.41
393 394 0.251341 ATGGGGAGGCAACAACTCAC 60.251 55.000 0.00 0.00 37.65 3.51
394 395 1.966451 GGGGAGGCAACAACTCACG 60.966 63.158 0.00 0.00 39.28 4.35
395 396 1.966451 GGGAGGCAACAACTCACGG 60.966 63.158 0.00 0.00 36.70 4.94
396 397 1.227853 GGAGGCAACAACTCACGGT 60.228 57.895 0.00 0.00 36.70 4.83
397 398 1.507141 GGAGGCAACAACTCACGGTG 61.507 60.000 0.56 0.56 36.70 4.94
398 399 1.507141 GAGGCAACAACTCACGGTGG 61.507 60.000 8.50 1.73 41.41 4.61
399 400 1.525077 GGCAACAACTCACGGTGGA 60.525 57.895 8.50 0.00 0.00 4.02
400 401 1.647084 GCAACAACTCACGGTGGAC 59.353 57.895 8.50 0.00 0.00 4.02
401 402 1.782028 GCAACAACTCACGGTGGACC 61.782 60.000 8.50 0.00 0.00 4.46
402 403 0.179056 CAACAACTCACGGTGGACCT 60.179 55.000 8.50 0.00 0.00 3.85
403 404 1.069513 CAACAACTCACGGTGGACCTA 59.930 52.381 8.50 0.00 0.00 3.08
404 405 0.966920 ACAACTCACGGTGGACCTAG 59.033 55.000 8.50 0.13 0.00 3.02
405 406 0.966920 CAACTCACGGTGGACCTAGT 59.033 55.000 8.50 0.81 0.00 2.57
406 407 0.966920 AACTCACGGTGGACCTAGTG 59.033 55.000 8.50 7.83 36.06 2.74
407 408 0.178970 ACTCACGGTGGACCTAGTGT 60.179 55.000 8.50 0.00 36.16 3.55
408 409 0.526662 CTCACGGTGGACCTAGTGTC 59.473 60.000 8.50 3.50 43.67 3.67
409 410 0.178984 TCACGGTGGACCTAGTGTCA 60.179 55.000 8.50 0.00 46.38 3.58
410 411 0.677288 CACGGTGGACCTAGTGTCAA 59.323 55.000 0.00 0.26 46.38 3.18
411 412 1.275291 CACGGTGGACCTAGTGTCAAT 59.725 52.381 0.00 0.00 46.38 2.57
412 413 1.275291 ACGGTGGACCTAGTGTCAATG 59.725 52.381 11.82 3.06 46.38 2.82
413 414 1.405526 CGGTGGACCTAGTGTCAATGG 60.406 57.143 11.82 0.00 46.38 3.16
414 415 1.628846 GGTGGACCTAGTGTCAATGGT 59.371 52.381 11.82 0.00 46.38 3.55
415 416 2.039879 GGTGGACCTAGTGTCAATGGTT 59.960 50.000 11.82 0.00 46.38 3.67
416 417 3.074412 GTGGACCTAGTGTCAATGGTTG 58.926 50.000 11.82 0.00 46.38 3.77
417 418 2.708861 TGGACCTAGTGTCAATGGTTGT 59.291 45.455 11.82 0.00 46.38 3.32
418 419 3.074412 GGACCTAGTGTCAATGGTTGTG 58.926 50.000 11.82 0.00 46.38 3.33
419 420 3.074412 GACCTAGTGTCAATGGTTGTGG 58.926 50.000 6.51 0.00 43.85 4.17
420 421 2.708861 ACCTAGTGTCAATGGTTGTGGA 59.291 45.455 0.00 0.00 0.00 4.02
421 422 3.330701 ACCTAGTGTCAATGGTTGTGGAT 59.669 43.478 0.00 0.00 0.00 3.41
422 423 3.941483 CCTAGTGTCAATGGTTGTGGATC 59.059 47.826 0.00 0.00 0.00 3.36
423 424 2.795329 AGTGTCAATGGTTGTGGATCC 58.205 47.619 4.20 4.20 0.00 3.36
424 425 1.468520 GTGTCAATGGTTGTGGATCCG 59.531 52.381 7.39 0.00 0.00 4.18
425 426 0.451783 GTCAATGGTTGTGGATCCGC 59.548 55.000 18.84 18.84 0.00 5.54
426 427 0.679640 TCAATGGTTGTGGATCCGCC 60.680 55.000 22.48 14.06 37.10 6.13
427 428 1.748879 AATGGTTGTGGATCCGCCG 60.749 57.895 22.48 0.00 40.66 6.46
451 452 2.365408 GACGAGTTCGACCTCCATTT 57.635 50.000 8.72 0.00 43.02 2.32
452 453 3.498927 GACGAGTTCGACCTCCATTTA 57.501 47.619 8.72 0.00 43.02 1.40
453 454 3.177487 GACGAGTTCGACCTCCATTTAC 58.823 50.000 8.72 0.00 43.02 2.01
454 455 2.094338 ACGAGTTCGACCTCCATTTACC 60.094 50.000 8.72 0.00 43.02 2.85
455 456 2.165845 CGAGTTCGACCTCCATTTACCT 59.834 50.000 4.20 0.00 43.02 3.08
456 457 3.734293 CGAGTTCGACCTCCATTTACCTC 60.734 52.174 4.20 0.00 43.02 3.85
457 458 3.170717 AGTTCGACCTCCATTTACCTCA 58.829 45.455 0.00 0.00 0.00 3.86
458 459 3.775316 AGTTCGACCTCCATTTACCTCAT 59.225 43.478 0.00 0.00 0.00 2.90
459 460 4.120589 GTTCGACCTCCATTTACCTCATC 58.879 47.826 0.00 0.00 0.00 2.92
460 461 2.698797 TCGACCTCCATTTACCTCATCC 59.301 50.000 0.00 0.00 0.00 3.51
461 462 2.545952 CGACCTCCATTTACCTCATCCG 60.546 54.545 0.00 0.00 0.00 4.18
462 463 2.434702 GACCTCCATTTACCTCATCCGT 59.565 50.000 0.00 0.00 0.00 4.69
463 464 2.170607 ACCTCCATTTACCTCATCCGTG 59.829 50.000 0.00 0.00 0.00 4.94
464 465 2.434336 CCTCCATTTACCTCATCCGTGA 59.566 50.000 0.00 0.00 0.00 4.35
478 479 3.675086 CGTGAGGAGATGGTGGATG 57.325 57.895 0.00 0.00 0.00 3.51
479 480 0.531532 CGTGAGGAGATGGTGGATGC 60.532 60.000 0.00 0.00 0.00 3.91
480 481 0.543277 GTGAGGAGATGGTGGATGCA 59.457 55.000 0.00 0.00 0.00 3.96
481 482 0.835276 TGAGGAGATGGTGGATGCAG 59.165 55.000 0.00 0.00 0.00 4.41
482 483 0.108207 GAGGAGATGGTGGATGCAGG 59.892 60.000 0.00 0.00 0.00 4.85
483 484 1.150081 GGAGATGGTGGATGCAGGG 59.850 63.158 0.00 0.00 0.00 4.45
484 485 1.348008 GGAGATGGTGGATGCAGGGA 61.348 60.000 0.00 0.00 0.00 4.20
485 486 0.179034 GAGATGGTGGATGCAGGGAC 60.179 60.000 0.00 0.00 0.00 4.46
486 487 0.622738 AGATGGTGGATGCAGGGACT 60.623 55.000 0.00 0.00 43.88 3.85
487 488 0.179034 GATGGTGGATGCAGGGACTC 60.179 60.000 0.00 0.00 34.60 3.36
488 489 1.639635 ATGGTGGATGCAGGGACTCC 61.640 60.000 0.00 0.00 34.60 3.85
489 490 2.187946 GTGGATGCAGGGACTCCG 59.812 66.667 0.00 0.00 34.60 4.63
490 491 2.038813 TGGATGCAGGGACTCCGA 59.961 61.111 0.00 0.00 34.60 4.55
491 492 1.383109 TGGATGCAGGGACTCCGAT 60.383 57.895 0.00 0.00 34.60 4.18
492 493 0.105709 TGGATGCAGGGACTCCGATA 60.106 55.000 0.00 0.00 34.60 2.92
493 494 1.048601 GGATGCAGGGACTCCGATAA 58.951 55.000 0.00 0.00 34.60 1.75
494 495 1.416401 GGATGCAGGGACTCCGATAAA 59.584 52.381 0.00 0.00 34.60 1.40
495 496 2.548920 GGATGCAGGGACTCCGATAAAG 60.549 54.545 0.00 0.00 34.60 1.85
496 497 1.860641 TGCAGGGACTCCGATAAAGA 58.139 50.000 0.00 0.00 34.60 2.52
497 498 2.184533 TGCAGGGACTCCGATAAAGAA 58.815 47.619 0.00 0.00 34.60 2.52
498 499 2.168521 TGCAGGGACTCCGATAAAGAAG 59.831 50.000 0.00 0.00 34.60 2.85
499 500 2.483889 GCAGGGACTCCGATAAAGAAGG 60.484 54.545 0.00 0.00 34.60 3.46
500 501 3.031736 CAGGGACTCCGATAAAGAAGGA 58.968 50.000 0.00 0.00 34.60 3.36
505 506 3.828875 CTCCGATAAAGAAGGAGGCTT 57.171 47.619 2.97 0.00 45.77 4.35
506 507 4.939052 CTCCGATAAAGAAGGAGGCTTA 57.061 45.455 2.97 0.00 45.77 3.09
507 508 4.877282 CTCCGATAAAGAAGGAGGCTTAG 58.123 47.826 2.97 0.00 45.77 2.18
508 509 3.641906 TCCGATAAAGAAGGAGGCTTAGG 59.358 47.826 0.00 0.00 0.00 2.69
509 510 3.641906 CCGATAAAGAAGGAGGCTTAGGA 59.358 47.826 0.00 0.00 0.00 2.94
510 511 4.284746 CCGATAAAGAAGGAGGCTTAGGAT 59.715 45.833 0.00 0.00 0.00 3.24
511 512 5.480772 CCGATAAAGAAGGAGGCTTAGGATA 59.519 44.000 0.00 0.00 0.00 2.59
512 513 6.014499 CCGATAAAGAAGGAGGCTTAGGATAA 60.014 42.308 0.00 0.00 0.00 1.75
513 514 6.869388 CGATAAAGAAGGAGGCTTAGGATAAC 59.131 42.308 0.00 0.00 0.00 1.89
514 515 5.375283 AAAGAAGGAGGCTTAGGATAACC 57.625 43.478 0.00 0.00 0.00 2.85
515 516 4.008916 AGAAGGAGGCTTAGGATAACCA 57.991 45.455 0.00 0.00 38.94 3.67
516 517 4.571951 AGAAGGAGGCTTAGGATAACCAT 58.428 43.478 0.00 0.00 38.94 3.55
517 518 4.595350 AGAAGGAGGCTTAGGATAACCATC 59.405 45.833 0.00 0.00 38.94 3.51
518 519 3.941629 AGGAGGCTTAGGATAACCATCA 58.058 45.455 0.00 0.00 38.94 3.07
519 520 4.507342 AGGAGGCTTAGGATAACCATCAT 58.493 43.478 0.00 0.00 38.94 2.45
520 521 4.288105 AGGAGGCTTAGGATAACCATCATG 59.712 45.833 0.00 0.00 38.94 3.07
521 522 4.566488 GGAGGCTTAGGATAACCATCATGG 60.566 50.000 0.54 0.54 45.02 3.66
522 523 3.331889 AGGCTTAGGATAACCATCATGGG 59.668 47.826 9.04 0.00 43.37 4.00
523 524 3.330701 GGCTTAGGATAACCATCATGGGA 59.669 47.826 9.04 0.00 43.37 4.37
524 525 4.202567 GGCTTAGGATAACCATCATGGGAA 60.203 45.833 9.04 0.00 43.37 3.97
525 526 5.006386 GCTTAGGATAACCATCATGGGAAG 58.994 45.833 9.04 1.23 43.37 3.46
526 527 5.564550 CTTAGGATAACCATCATGGGAAGG 58.435 45.833 9.04 0.00 43.37 3.46
527 528 3.680169 AGGATAACCATCATGGGAAGGA 58.320 45.455 9.04 0.00 43.37 3.36
528 529 4.254540 AGGATAACCATCATGGGAAGGAT 58.745 43.478 9.04 0.00 43.37 3.24
529 530 4.043812 AGGATAACCATCATGGGAAGGATG 59.956 45.833 9.04 0.00 43.37 3.51
530 531 4.043310 GGATAACCATCATGGGAAGGATGA 59.957 45.833 9.04 0.00 43.37 2.92
531 532 3.589951 AACCATCATGGGAAGGATGAG 57.410 47.619 9.04 0.00 43.37 2.90
532 533 1.144503 ACCATCATGGGAAGGATGAGC 59.855 52.381 9.04 0.00 43.37 4.26
533 534 1.520494 CATCATGGGAAGGATGAGCG 58.480 55.000 0.00 0.00 42.73 5.03
534 535 1.135094 ATCATGGGAAGGATGAGCGT 58.865 50.000 0.00 0.00 33.38 5.07
535 536 0.178767 TCATGGGAAGGATGAGCGTG 59.821 55.000 0.00 0.00 0.00 5.34
536 537 0.178767 CATGGGAAGGATGAGCGTGA 59.821 55.000 0.00 0.00 0.00 4.35
537 538 1.135094 ATGGGAAGGATGAGCGTGAT 58.865 50.000 0.00 0.00 0.00 3.06
538 539 0.465705 TGGGAAGGATGAGCGTGATC 59.534 55.000 0.00 0.00 0.00 2.92
539 540 0.465705 GGGAAGGATGAGCGTGATCA 59.534 55.000 0.00 0.00 0.00 2.92
540 541 1.576356 GGAAGGATGAGCGTGATCAC 58.424 55.000 16.21 16.21 30.46 3.06
551 552 2.478989 GTGATCACGGAGGAGACGA 58.521 57.895 10.69 0.00 34.93 4.20
552 553 0.809385 GTGATCACGGAGGAGACGAA 59.191 55.000 10.69 0.00 34.93 3.85
553 554 0.809385 TGATCACGGAGGAGACGAAC 59.191 55.000 0.00 0.00 34.93 3.95
554 555 1.096416 GATCACGGAGGAGACGAACT 58.904 55.000 0.00 0.00 34.93 3.01
555 556 1.064357 GATCACGGAGGAGACGAACTC 59.936 57.143 0.00 0.00 44.24 3.01
556 557 0.250597 TCACGGAGGAGACGAACTCA 60.251 55.000 13.89 0.00 46.54 3.41
557 558 0.596577 CACGGAGGAGACGAACTCAA 59.403 55.000 13.89 0.00 46.54 3.02
558 559 1.202582 CACGGAGGAGACGAACTCAAT 59.797 52.381 13.89 4.61 46.54 2.57
559 560 1.202582 ACGGAGGAGACGAACTCAATG 59.797 52.381 13.89 5.64 46.54 2.82
560 561 1.472878 CGGAGGAGACGAACTCAATGA 59.527 52.381 13.89 0.00 46.54 2.57
561 562 2.478709 CGGAGGAGACGAACTCAATGAG 60.479 54.545 8.98 8.98 46.54 2.90
562 563 2.494073 GGAGGAGACGAACTCAATGAGT 59.506 50.000 10.56 10.56 45.64 3.41
563 564 3.695060 GGAGGAGACGAACTCAATGAGTA 59.305 47.826 17.04 0.00 42.59 2.59
564 565 4.339814 GGAGGAGACGAACTCAATGAGTAT 59.660 45.833 17.04 7.03 42.59 2.12
565 566 5.255710 AGGAGACGAACTCAATGAGTATG 57.744 43.478 17.04 13.89 42.59 2.39
566 567 4.950475 AGGAGACGAACTCAATGAGTATGA 59.050 41.667 17.04 0.00 42.59 2.15
567 568 5.038033 GGAGACGAACTCAATGAGTATGAC 58.962 45.833 17.04 11.81 42.59 3.06
568 569 4.663166 AGACGAACTCAATGAGTATGACG 58.337 43.478 17.04 19.44 42.59 4.35
569 570 4.156190 AGACGAACTCAATGAGTATGACGT 59.844 41.667 24.74 24.74 42.59 4.34
570 571 4.413087 ACGAACTCAATGAGTATGACGTC 58.587 43.478 17.04 9.11 42.59 4.34
571 572 3.478874 CGAACTCAATGAGTATGACGTCG 59.521 47.826 17.04 16.09 42.59 5.12
572 573 4.413087 GAACTCAATGAGTATGACGTCGT 58.587 43.478 17.04 15.78 42.59 4.34
573 574 4.436242 ACTCAATGAGTATGACGTCGTT 57.564 40.909 15.09 5.79 41.51 3.85
574 575 4.166523 ACTCAATGAGTATGACGTCGTTG 58.833 43.478 15.09 7.06 41.51 4.10
575 576 4.166523 CTCAATGAGTATGACGTCGTTGT 58.833 43.478 16.79 3.25 0.00 3.32
576 577 4.163552 TCAATGAGTATGACGTCGTTGTC 58.836 43.478 16.79 13.05 39.37 3.18
577 578 8.437098 ACTCAATGAGTATGACGTCGTTGTCA 62.437 42.308 15.09 17.98 42.64 3.58
578 579 9.645296 ACTCAATGAGTATGACGTCGTTGTCAT 62.645 40.741 15.09 19.30 42.92 3.06
582 583 3.786809 TGACGTCGTTGTCATCTCC 57.213 52.632 11.62 0.00 43.62 3.71
583 584 1.244816 TGACGTCGTTGTCATCTCCT 58.755 50.000 11.62 0.00 43.62 3.69
584 585 1.199327 TGACGTCGTTGTCATCTCCTC 59.801 52.381 11.62 0.00 43.62 3.71
585 586 0.526662 ACGTCGTTGTCATCTCCTCC 59.473 55.000 0.00 0.00 0.00 4.30
586 587 0.523546 CGTCGTTGTCATCTCCTCCG 60.524 60.000 0.00 0.00 0.00 4.63
587 588 0.809385 GTCGTTGTCATCTCCTCCGA 59.191 55.000 0.00 0.00 0.00 4.55
588 589 0.809385 TCGTTGTCATCTCCTCCGAC 59.191 55.000 0.00 0.00 0.00 4.79
589 590 0.811915 CGTTGTCATCTCCTCCGACT 59.188 55.000 0.00 0.00 0.00 4.18
590 591 1.202200 CGTTGTCATCTCCTCCGACTC 60.202 57.143 0.00 0.00 0.00 3.36
591 592 1.135333 GTTGTCATCTCCTCCGACTCC 59.865 57.143 0.00 0.00 0.00 3.85
592 593 0.748367 TGTCATCTCCTCCGACTCCG 60.748 60.000 0.00 0.00 0.00 4.63
593 594 0.464013 GTCATCTCCTCCGACTCCGA 60.464 60.000 0.00 0.00 38.22 4.55
594 595 0.179043 TCATCTCCTCCGACTCCGAG 60.179 60.000 0.00 0.00 38.22 4.63
595 596 1.149627 ATCTCCTCCGACTCCGAGG 59.850 63.158 7.02 7.02 38.22 4.63
596 597 1.346479 ATCTCCTCCGACTCCGAGGA 61.346 60.000 13.61 13.61 38.68 3.71
597 598 1.149627 CTCCTCCGACTCCGAGGAT 59.850 63.158 14.41 0.00 39.52 3.24
598 599 1.152943 TCCTCCGACTCCGAGGATG 60.153 63.158 11.04 0.00 37.27 3.51
599 600 1.152943 CCTCCGACTCCGAGGATGA 60.153 63.158 7.48 0.00 36.12 2.92
600 601 1.169661 CCTCCGACTCCGAGGATGAG 61.170 65.000 7.48 2.38 36.12 2.90
601 602 1.152943 TCCGACTCCGAGGATGAGG 60.153 63.158 0.00 0.00 38.22 3.86
602 603 2.725008 CGACTCCGAGGATGAGGC 59.275 66.667 0.00 0.00 38.22 4.70
603 604 2.851071 CGACTCCGAGGATGAGGCC 61.851 68.421 0.00 0.00 34.16 5.19
604 605 1.456705 GACTCCGAGGATGAGGCCT 60.457 63.158 3.86 3.86 42.17 5.19
605 606 0.178987 GACTCCGAGGATGAGGCCTA 60.179 60.000 4.42 0.00 38.73 3.93
606 607 0.178975 ACTCCGAGGATGAGGCCTAG 60.179 60.000 4.42 0.00 38.73 3.02
607 608 3.784573 CCGAGGATGAGGCCTAGG 58.215 66.667 4.42 3.67 43.10 3.02
608 609 1.910772 CCGAGGATGAGGCCTAGGG 60.911 68.421 4.42 0.00 44.43 3.53
609 610 1.910772 CGAGGATGAGGCCTAGGGG 60.911 68.421 4.42 0.00 38.73 4.79
610 611 1.237458 GAGGATGAGGCCTAGGGGT 59.763 63.158 4.42 0.00 38.73 4.95
611 612 1.074167 AGGATGAGGCCTAGGGGTG 60.074 63.158 4.42 0.00 36.22 4.61
612 613 2.150051 GGATGAGGCCTAGGGGTGG 61.150 68.421 4.42 0.00 34.45 4.61
619 620 2.365105 CCTAGGGGTGGCCGAGAA 60.365 66.667 0.00 0.00 0.00 2.87
620 621 2.435693 CCTAGGGGTGGCCGAGAAG 61.436 68.421 0.00 0.00 0.00 2.85
621 622 1.686110 CTAGGGGTGGCCGAGAAGT 60.686 63.158 0.00 0.00 0.00 3.01
622 623 1.229400 TAGGGGTGGCCGAGAAGTT 60.229 57.895 0.00 0.00 0.00 2.66
623 624 0.838987 TAGGGGTGGCCGAGAAGTTT 60.839 55.000 0.00 0.00 0.00 2.66
624 625 0.838987 AGGGGTGGCCGAGAAGTTTA 60.839 55.000 0.00 0.00 0.00 2.01
625 626 0.037160 GGGGTGGCCGAGAAGTTTAA 59.963 55.000 0.00 0.00 0.00 1.52
626 627 1.162698 GGGTGGCCGAGAAGTTTAAC 58.837 55.000 0.00 0.00 0.00 2.01
627 628 1.162698 GGTGGCCGAGAAGTTTAACC 58.837 55.000 0.00 0.00 0.00 2.85
628 629 1.271217 GGTGGCCGAGAAGTTTAACCT 60.271 52.381 0.00 0.00 0.00 3.50
629 630 2.027837 GGTGGCCGAGAAGTTTAACCTA 60.028 50.000 0.00 0.00 0.00 3.08
630 631 3.557686 GGTGGCCGAGAAGTTTAACCTAA 60.558 47.826 0.00 0.00 0.00 2.69
631 632 3.683340 GTGGCCGAGAAGTTTAACCTAAG 59.317 47.826 0.00 0.00 0.00 2.18
632 633 2.676839 GGCCGAGAAGTTTAACCTAAGC 59.323 50.000 0.00 0.00 0.00 3.09
633 634 3.597255 GCCGAGAAGTTTAACCTAAGCT 58.403 45.455 0.00 0.00 0.00 3.74
634 635 4.382362 GGCCGAGAAGTTTAACCTAAGCTA 60.382 45.833 0.00 0.00 0.00 3.32
635 636 4.804665 GCCGAGAAGTTTAACCTAAGCTAG 59.195 45.833 0.00 0.00 0.00 3.42
636 637 4.804665 CCGAGAAGTTTAACCTAAGCTAGC 59.195 45.833 6.62 6.62 0.00 3.42
637 638 5.394333 CCGAGAAGTTTAACCTAAGCTAGCT 60.394 44.000 12.68 12.68 0.00 3.32
638 639 6.100668 CGAGAAGTTTAACCTAAGCTAGCTT 58.899 40.000 31.38 31.38 39.83 3.74
639 640 6.253942 CGAGAAGTTTAACCTAAGCTAGCTTC 59.746 42.308 32.51 15.86 37.47 3.86
640 641 7.005709 AGAAGTTTAACCTAAGCTAGCTTCA 57.994 36.000 32.51 17.56 37.47 3.02
641 642 6.874664 AGAAGTTTAACCTAAGCTAGCTTCAC 59.125 38.462 32.51 17.35 37.47 3.18
642 643 6.361768 AGTTTAACCTAAGCTAGCTTCACT 57.638 37.500 32.51 19.00 37.47 3.41
643 644 6.166982 AGTTTAACCTAAGCTAGCTTCACTG 58.833 40.000 32.51 20.29 37.47 3.66
644 645 5.740290 TTAACCTAAGCTAGCTTCACTGT 57.260 39.130 32.51 20.89 37.47 3.55
645 646 4.625607 AACCTAAGCTAGCTTCACTGTT 57.374 40.909 32.51 24.63 37.47 3.16
646 647 4.195225 ACCTAAGCTAGCTTCACTGTTC 57.805 45.455 32.51 0.00 37.47 3.18
647 648 3.578716 ACCTAAGCTAGCTTCACTGTTCA 59.421 43.478 32.51 12.35 37.47 3.18
648 649 4.223923 ACCTAAGCTAGCTTCACTGTTCAT 59.776 41.667 32.51 8.36 37.47 2.57
649 650 5.422331 ACCTAAGCTAGCTTCACTGTTCATA 59.578 40.000 32.51 10.88 37.47 2.15
650 651 5.982516 CCTAAGCTAGCTTCACTGTTCATAG 59.017 44.000 32.51 19.11 37.47 2.23
651 652 5.413309 AAGCTAGCTTCACTGTTCATAGT 57.587 39.130 24.42 0.00 0.00 2.12
652 653 5.004922 AGCTAGCTTCACTGTTCATAGTC 57.995 43.478 12.68 0.00 0.00 2.59
653 654 4.464244 AGCTAGCTTCACTGTTCATAGTCA 59.536 41.667 12.68 0.00 0.00 3.41
654 655 4.803088 GCTAGCTTCACTGTTCATAGTCAG 59.197 45.833 7.70 0.00 37.65 3.51
655 656 3.594134 AGCTTCACTGTTCATAGTCAGC 58.406 45.455 0.00 0.00 35.59 4.26
656 657 2.346847 GCTTCACTGTTCATAGTCAGCG 59.653 50.000 0.00 0.00 35.37 5.18
657 658 3.579709 CTTCACTGTTCATAGTCAGCGT 58.420 45.455 0.00 0.00 35.37 5.07
658 659 3.660501 TCACTGTTCATAGTCAGCGTT 57.339 42.857 0.00 0.00 35.37 4.84
659 660 4.776795 TCACTGTTCATAGTCAGCGTTA 57.223 40.909 0.00 0.00 35.37 3.18
660 661 5.324784 TCACTGTTCATAGTCAGCGTTAT 57.675 39.130 0.00 0.00 35.37 1.89
661 662 5.102313 TCACTGTTCATAGTCAGCGTTATG 58.898 41.667 0.00 0.00 35.37 1.90
662 663 4.864806 CACTGTTCATAGTCAGCGTTATGT 59.135 41.667 0.00 0.00 35.37 2.29
663 664 5.348724 CACTGTTCATAGTCAGCGTTATGTT 59.651 40.000 0.00 0.00 35.37 2.71
664 665 5.932303 ACTGTTCATAGTCAGCGTTATGTTT 59.068 36.000 0.00 0.00 35.37 2.83
665 666 6.426937 ACTGTTCATAGTCAGCGTTATGTTTT 59.573 34.615 0.00 0.00 35.37 2.43
666 667 7.601130 ACTGTTCATAGTCAGCGTTATGTTTTA 59.399 33.333 0.00 0.00 35.37 1.52
667 668 8.487313 TGTTCATAGTCAGCGTTATGTTTTAT 57.513 30.769 0.00 0.00 0.00 1.40
668 669 8.941977 TGTTCATAGTCAGCGTTATGTTTTATT 58.058 29.630 0.00 0.00 0.00 1.40
669 670 9.769093 GTTCATAGTCAGCGTTATGTTTTATTT 57.231 29.630 0.00 0.00 0.00 1.40
673 674 9.931210 ATAGTCAGCGTTATGTTTTATTTTAGC 57.069 29.630 0.00 0.00 0.00 3.09
674 675 7.812648 AGTCAGCGTTATGTTTTATTTTAGCA 58.187 30.769 0.00 0.00 0.00 3.49
675 676 7.749126 AGTCAGCGTTATGTTTTATTTTAGCAC 59.251 33.333 0.00 0.00 0.00 4.40
676 677 7.007995 GTCAGCGTTATGTTTTATTTTAGCACC 59.992 37.037 0.00 0.00 0.00 5.01
677 678 6.021782 CAGCGTTATGTTTTATTTTAGCACCG 60.022 38.462 0.00 0.00 0.00 4.94
678 679 5.796437 GCGTTATGTTTTATTTTAGCACCGT 59.204 36.000 0.00 0.00 0.00 4.83
679 680 6.306117 GCGTTATGTTTTATTTTAGCACCGTT 59.694 34.615 0.00 0.00 0.00 4.44
680 681 7.148934 GCGTTATGTTTTATTTTAGCACCGTTT 60.149 33.333 0.00 0.00 0.00 3.60
681 682 8.360132 CGTTATGTTTTATTTTAGCACCGTTTC 58.640 33.333 0.00 0.00 0.00 2.78
682 683 6.921332 ATGTTTTATTTTAGCACCGTTTCG 57.079 33.333 0.00 0.00 0.00 3.46
697 698 4.313522 CGTTTCGGAGATCTCTTGTTTG 57.686 45.455 21.81 5.55 35.04 2.93
698 699 3.987868 CGTTTCGGAGATCTCTTGTTTGA 59.012 43.478 21.81 8.12 35.04 2.69
699 700 4.090642 CGTTTCGGAGATCTCTTGTTTGAG 59.909 45.833 21.81 4.36 35.04 3.02
700 701 3.238108 TCGGAGATCTCTTGTTTGAGC 57.762 47.619 21.81 1.51 34.29 4.26
701 702 2.828520 TCGGAGATCTCTTGTTTGAGCT 59.171 45.455 21.81 0.00 34.29 4.09
702 703 3.119316 TCGGAGATCTCTTGTTTGAGCTC 60.119 47.826 21.81 6.82 42.81 4.09
704 705 3.186119 GAGATCTCTTGTTTGAGCTCCG 58.814 50.000 15.80 0.00 39.11 4.63
705 706 2.564947 AGATCTCTTGTTTGAGCTCCGT 59.435 45.455 12.15 0.00 31.67 4.69
706 707 2.154854 TCTCTTGTTTGAGCTCCGTG 57.845 50.000 12.15 0.00 34.29 4.94
707 708 1.686587 TCTCTTGTTTGAGCTCCGTGA 59.313 47.619 12.15 0.40 34.29 4.35
708 709 2.300152 TCTCTTGTTTGAGCTCCGTGAT 59.700 45.455 12.15 0.00 34.29 3.06
709 710 3.070018 CTCTTGTTTGAGCTCCGTGATT 58.930 45.455 12.15 0.00 0.00 2.57
710 711 4.021456 TCTCTTGTTTGAGCTCCGTGATTA 60.021 41.667 12.15 0.00 34.29 1.75
711 712 4.245660 TCTTGTTTGAGCTCCGTGATTAG 58.754 43.478 12.15 0.41 0.00 1.73
712 713 2.346803 TGTTTGAGCTCCGTGATTAGC 58.653 47.619 12.15 0.00 39.08 3.09
732 733 4.644498 AGCTCACAATTTTCATTTTGGGG 58.356 39.130 0.00 0.00 0.00 4.96
779 780 5.809001 TGCAGTATCCTCTCAAAAGTCAAT 58.191 37.500 0.00 0.00 0.00 2.57
787 788 5.309543 TCCTCTCAAAAGTCAATACCCAGAA 59.690 40.000 0.00 0.00 0.00 3.02
790 791 7.311092 TCTCAAAAGTCAATACCCAGAAGTA 57.689 36.000 0.00 0.00 0.00 2.24
804 805 3.119352 CCAGAAGTATTTTTGGAGCAGGC 60.119 47.826 1.60 0.00 35.80 4.85
836 837 6.941218 GTTAACAACGAGGAGGTTAGTTAG 57.059 41.667 0.00 0.00 31.54 2.34
837 838 6.450545 GTTAACAACGAGGAGGTTAGTTAGT 58.549 40.000 0.00 0.00 31.54 2.24
838 839 4.516365 ACAACGAGGAGGTTAGTTAGTG 57.484 45.455 0.00 0.00 0.00 2.74
896 898 2.380941 GTCTCTCCTCCTGTTCCTACC 58.619 57.143 0.00 0.00 0.00 3.18
1539 1562 2.342648 GAGCTCGTCCGGGTGTTT 59.657 61.111 0.00 0.00 0.00 2.83
1634 1691 1.005394 CTAACCCCAAGCACGACGT 60.005 57.895 0.00 0.00 0.00 4.34
1731 1788 4.865865 GAGGCCTCCATTTCTCGG 57.134 61.111 23.19 0.00 0.00 4.63
1760 1820 3.713902 CAGTGGTGCAAGAGGTCTT 57.286 52.632 0.00 0.00 36.45 3.01
1761 1821 1.972872 CAGTGGTGCAAGAGGTCTTT 58.027 50.000 0.00 0.00 33.11 2.52
1845 1905 0.598065 GGTTTGTGCTGGATGTCACC 59.402 55.000 0.00 0.00 32.51 4.02
1866 1926 4.136978 AGGGTCACCGCTGAGATT 57.863 55.556 0.00 0.00 43.47 2.40
1971 2031 3.530910 AAGGGGTCTTGTCGCCGTG 62.531 63.158 0.00 0.00 43.76 4.94
2114 2174 4.636206 GGTGACATTGTTCCAGTTATCCTC 59.364 45.833 0.00 0.00 0.00 3.71
2220 2281 4.012374 TGGAAGCAGAAATCTGTTGGATC 58.988 43.478 11.77 1.45 45.45 3.36
2413 2474 3.062122 TGATGTTCTTCAGCATCAGCA 57.938 42.857 3.45 0.00 44.29 4.41
2474 2535 6.016610 GCAGGAAACTTGTCCACTTATGTTTA 60.017 38.462 0.00 0.00 40.21 2.01
2497 2558 4.782156 ACCATTCCCTTTTTGCCATGATTA 59.218 37.500 0.00 0.00 0.00 1.75
2498 2559 5.429435 ACCATTCCCTTTTTGCCATGATTAT 59.571 36.000 0.00 0.00 0.00 1.28
2697 3286 5.883115 TCGATCATATTAGATCTCTCGCCTT 59.117 40.000 0.00 0.00 41.74 4.35
2788 3377 2.676121 CCACTGGGCAATTGGCGA 60.676 61.111 23.97 19.89 46.16 5.54
2882 3471 3.642141 ACACTGGTGAGGGTTTCAAATT 58.358 40.909 7.78 0.00 37.61 1.82
2911 3500 4.528596 GGCCCTCTCATTAGCAGTAGATAA 59.471 45.833 0.00 0.00 0.00 1.75
2954 3543 2.959707 AGTTACTCGCTTATGAGGAGGG 59.040 50.000 7.55 0.00 40.39 4.30
2955 3544 1.329256 TACTCGCTTATGAGGAGGGC 58.671 55.000 7.55 0.00 40.39 5.19
2956 3545 0.397816 ACTCGCTTATGAGGAGGGCT 60.398 55.000 7.55 0.00 40.39 5.19
2957 3546 0.033228 CTCGCTTATGAGGAGGGCTG 59.967 60.000 0.00 0.00 32.18 4.85
2958 3547 1.070445 CGCTTATGAGGAGGGCTGG 59.930 63.158 0.00 0.00 0.00 4.85
2959 3548 1.690219 CGCTTATGAGGAGGGCTGGT 61.690 60.000 0.00 0.00 0.00 4.00
2960 3549 1.424638 GCTTATGAGGAGGGCTGGTA 58.575 55.000 0.00 0.00 0.00 3.25
2961 3550 1.981495 GCTTATGAGGAGGGCTGGTAT 59.019 52.381 0.00 0.00 0.00 2.73
2962 3551 2.289945 GCTTATGAGGAGGGCTGGTATG 60.290 54.545 0.00 0.00 0.00 2.39
2963 3552 2.030027 TATGAGGAGGGCTGGTATGG 57.970 55.000 0.00 0.00 0.00 2.74
2964 3553 0.029681 ATGAGGAGGGCTGGTATGGT 60.030 55.000 0.00 0.00 0.00 3.55
2965 3554 0.691078 TGAGGAGGGCTGGTATGGTC 60.691 60.000 0.00 0.00 0.00 4.02
2966 3555 0.399233 GAGGAGGGCTGGTATGGTCT 60.399 60.000 0.00 0.00 0.00 3.85
2967 3556 0.692419 AGGAGGGCTGGTATGGTCTG 60.692 60.000 0.00 0.00 0.00 3.51
2968 3557 0.983378 GGAGGGCTGGTATGGTCTGT 60.983 60.000 0.00 0.00 0.00 3.41
2969 3558 0.912486 GAGGGCTGGTATGGTCTGTT 59.088 55.000 0.00 0.00 0.00 3.16
2970 3559 2.116238 GAGGGCTGGTATGGTCTGTTA 58.884 52.381 0.00 0.00 0.00 2.41
2971 3560 2.504175 GAGGGCTGGTATGGTCTGTTAA 59.496 50.000 0.00 0.00 0.00 2.01
2972 3561 2.505819 AGGGCTGGTATGGTCTGTTAAG 59.494 50.000 0.00 0.00 0.00 1.85
2973 3562 2.504175 GGGCTGGTATGGTCTGTTAAGA 59.496 50.000 0.00 0.00 0.00 2.10
2974 3563 3.432326 GGGCTGGTATGGTCTGTTAAGAG 60.432 52.174 0.00 0.00 31.37 2.85
2975 3564 3.451178 GGCTGGTATGGTCTGTTAAGAGA 59.549 47.826 0.00 0.00 31.37 3.10
2976 3565 4.442192 GGCTGGTATGGTCTGTTAAGAGAG 60.442 50.000 1.89 0.00 31.37 3.20
2977 3566 4.402793 GCTGGTATGGTCTGTTAAGAGAGA 59.597 45.833 1.89 0.00 31.37 3.10
2978 3567 5.680151 GCTGGTATGGTCTGTTAAGAGAGAC 60.680 48.000 1.89 1.96 43.51 3.36
2985 3574 5.066968 GTCTGTTAAGAGAGACCTGAAGG 57.933 47.826 1.89 0.00 39.59 3.46
2986 3575 4.767928 GTCTGTTAAGAGAGACCTGAAGGA 59.232 45.833 1.89 0.00 39.59 3.36
2987 3576 5.420739 GTCTGTTAAGAGAGACCTGAAGGAT 59.579 44.000 1.89 0.00 39.59 3.24
2988 3577 6.019748 TCTGTTAAGAGAGACCTGAAGGATT 58.980 40.000 2.62 0.00 38.94 3.01
2989 3578 6.042638 TGTTAAGAGAGACCTGAAGGATTG 57.957 41.667 2.62 0.00 38.94 2.67
2990 3579 5.046304 TGTTAAGAGAGACCTGAAGGATTGG 60.046 44.000 2.62 0.00 38.94 3.16
2991 3580 2.476199 AGAGAGACCTGAAGGATTGGG 58.524 52.381 2.62 0.00 38.94 4.12
2992 3581 1.488393 GAGAGACCTGAAGGATTGGGG 59.512 57.143 2.62 0.00 38.94 4.96
2993 3582 1.203492 AGAGACCTGAAGGATTGGGGT 60.203 52.381 2.62 0.00 38.94 4.95
2994 3583 2.045885 AGAGACCTGAAGGATTGGGGTA 59.954 50.000 2.62 0.00 38.94 3.69
2995 3584 3.049344 GAGACCTGAAGGATTGGGGTAT 58.951 50.000 2.62 0.00 38.94 2.73
2996 3585 3.049344 AGACCTGAAGGATTGGGGTATC 58.951 50.000 2.62 0.00 38.94 2.24
2997 3586 2.777692 GACCTGAAGGATTGGGGTATCA 59.222 50.000 2.62 0.00 38.94 2.15
2998 3587 2.509964 ACCTGAAGGATTGGGGTATCAC 59.490 50.000 2.62 0.00 38.94 3.06
2999 3588 2.158608 CCTGAAGGATTGGGGTATCACC 60.159 54.545 0.00 0.00 37.39 4.02
3000 3589 1.488812 TGAAGGATTGGGGTATCACCG 59.511 52.381 0.00 0.00 39.83 4.94
3001 3590 1.766496 GAAGGATTGGGGTATCACCGA 59.234 52.381 0.00 0.00 39.83 4.69
3002 3591 1.887797 AGGATTGGGGTATCACCGAA 58.112 50.000 0.00 0.00 39.83 4.30
3003 3592 1.768870 AGGATTGGGGTATCACCGAAG 59.231 52.381 0.00 0.00 39.83 3.79
3004 3593 1.766496 GGATTGGGGTATCACCGAAGA 59.234 52.381 0.00 0.00 39.83 2.87
3005 3594 2.224305 GGATTGGGGTATCACCGAAGAG 60.224 54.545 0.00 0.00 39.83 2.85
3006 3595 0.539986 TTGGGGTATCACCGAAGAGC 59.460 55.000 0.00 0.00 39.83 4.09
3007 3596 0.325296 TGGGGTATCACCGAAGAGCT 60.325 55.000 0.00 0.00 39.83 4.09
3008 3597 1.063492 TGGGGTATCACCGAAGAGCTA 60.063 52.381 0.00 0.00 39.83 3.32
3009 3598 1.614413 GGGGTATCACCGAAGAGCTAG 59.386 57.143 0.00 0.00 39.83 3.42
3010 3599 1.000052 GGGTATCACCGAAGAGCTAGC 60.000 57.143 6.62 6.62 39.83 3.42
3011 3600 1.957877 GGTATCACCGAAGAGCTAGCT 59.042 52.381 19.45 19.45 0.00 3.32
3012 3601 3.147629 GGTATCACCGAAGAGCTAGCTA 58.852 50.000 19.38 0.00 0.00 3.32
3013 3602 3.759618 GGTATCACCGAAGAGCTAGCTAT 59.240 47.826 19.38 12.73 0.00 2.97
3014 3603 3.932545 ATCACCGAAGAGCTAGCTATG 57.067 47.619 19.38 5.35 0.00 2.23
3015 3604 1.957177 TCACCGAAGAGCTAGCTATGG 59.043 52.381 19.38 18.33 0.00 2.74
3016 3605 1.957177 CACCGAAGAGCTAGCTATGGA 59.043 52.381 19.38 0.00 0.00 3.41
3017 3606 1.957877 ACCGAAGAGCTAGCTATGGAC 59.042 52.381 19.38 4.54 0.00 4.02
3018 3607 1.957177 CCGAAGAGCTAGCTATGGACA 59.043 52.381 19.38 0.00 0.00 4.02
3019 3608 2.030363 CCGAAGAGCTAGCTATGGACAG 60.030 54.545 19.38 5.13 0.00 3.51
3020 3609 2.030363 CGAAGAGCTAGCTATGGACAGG 60.030 54.545 19.38 0.00 0.00 4.00
3021 3610 2.008242 AGAGCTAGCTATGGACAGGG 57.992 55.000 19.38 0.00 0.00 4.45
3022 3611 0.972883 GAGCTAGCTATGGACAGGGG 59.027 60.000 19.38 0.00 0.00 4.79
3023 3612 0.266152 AGCTAGCTATGGACAGGGGT 59.734 55.000 17.69 0.00 0.00 4.95
3024 3613 0.394565 GCTAGCTATGGACAGGGGTG 59.605 60.000 7.70 0.00 0.00 4.61
3025 3614 0.394565 CTAGCTATGGACAGGGGTGC 59.605 60.000 0.00 0.00 35.66 5.01
3030 3619 2.531428 TGGACAGGGGTGCATGGA 60.531 61.111 0.00 0.00 40.73 3.41
3031 3620 2.159490 TGGACAGGGGTGCATGGAA 61.159 57.895 0.00 0.00 40.73 3.53
3032 3621 1.379044 GGACAGGGGTGCATGGAAG 60.379 63.158 0.00 0.00 35.12 3.46
3033 3622 2.036256 ACAGGGGTGCATGGAAGC 59.964 61.111 0.00 0.00 0.00 3.86
3034 3623 2.357836 CAGGGGTGCATGGAAGCT 59.642 61.111 0.00 0.00 34.99 3.74
3035 3624 1.304713 CAGGGGTGCATGGAAGCTT 60.305 57.895 0.00 0.00 34.99 3.74
3036 3625 1.304713 AGGGGTGCATGGAAGCTTG 60.305 57.895 2.10 0.00 34.99 4.01
3037 3626 2.575461 GGGTGCATGGAAGCTTGC 59.425 61.111 11.58 11.58 39.33 4.01
3038 3627 1.980772 GGGTGCATGGAAGCTTGCT 60.981 57.895 19.34 1.86 39.60 3.91
3039 3628 0.680921 GGGTGCATGGAAGCTTGCTA 60.681 55.000 19.34 6.07 39.60 3.49
3040 3629 1.396653 GGTGCATGGAAGCTTGCTAT 58.603 50.000 19.34 8.14 39.60 2.97
3041 3630 1.336125 GGTGCATGGAAGCTTGCTATC 59.664 52.381 19.34 8.04 39.60 2.08
3042 3631 1.336125 GTGCATGGAAGCTTGCTATCC 59.664 52.381 19.34 6.99 39.60 2.59
3043 3632 1.064537 TGCATGGAAGCTTGCTATCCA 60.065 47.619 19.34 20.23 46.60 3.41
3047 3636 2.646930 TGGAAGCTTGCTATCCATGTG 58.353 47.619 19.34 0.00 38.30 3.21
3048 3637 1.336125 GGAAGCTTGCTATCCATGTGC 59.664 52.381 11.19 0.00 33.30 4.57
3049 3638 1.336125 GAAGCTTGCTATCCATGTGCC 59.664 52.381 2.10 0.00 0.00 5.01
3050 3639 0.256752 AGCTTGCTATCCATGTGCCA 59.743 50.000 0.00 0.00 0.00 4.92
3051 3640 0.666913 GCTTGCTATCCATGTGCCAG 59.333 55.000 0.00 0.00 0.00 4.85
3052 3641 1.748244 GCTTGCTATCCATGTGCCAGA 60.748 52.381 0.00 0.00 0.00 3.86
3053 3642 2.219458 CTTGCTATCCATGTGCCAGAG 58.781 52.381 0.00 0.00 0.00 3.35
3054 3643 0.179037 TGCTATCCATGTGCCAGAGC 60.179 55.000 0.00 0.00 40.48 4.09
3055 3644 0.888285 GCTATCCATGTGCCAGAGCC 60.888 60.000 0.00 0.00 38.69 4.70
3056 3645 0.471191 CTATCCATGTGCCAGAGCCA 59.529 55.000 0.00 0.00 38.69 4.75
3057 3646 1.073444 CTATCCATGTGCCAGAGCCAT 59.927 52.381 0.00 0.00 38.69 4.40
3058 3647 0.467474 ATCCATGTGCCAGAGCCATG 60.467 55.000 8.59 8.59 42.54 3.66
3059 3648 1.077285 CCATGTGCCAGAGCCATGA 60.077 57.895 14.22 0.00 44.14 3.07
3060 3649 1.101635 CCATGTGCCAGAGCCATGAG 61.102 60.000 14.22 5.17 44.14 2.90
3061 3650 0.393944 CATGTGCCAGAGCCATGAGT 60.394 55.000 0.00 0.00 44.14 3.41
3062 3651 0.330604 ATGTGCCAGAGCCATGAGTT 59.669 50.000 0.00 0.00 38.69 3.01
3063 3652 0.607217 TGTGCCAGAGCCATGAGTTG 60.607 55.000 0.00 0.00 38.69 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 9.435688 GCAAGGAAACCTTAATGTTCATAAATT 57.564 29.630 2.62 0.00 42.67 1.82
20 21 8.040727 GGCAAGGAAACCTTAATGTTCATAAAT 58.959 33.333 2.62 0.00 42.67 1.40
21 22 7.015682 TGGCAAGGAAACCTTAATGTTCATAAA 59.984 33.333 2.62 0.00 42.67 1.40
22 23 6.495181 TGGCAAGGAAACCTTAATGTTCATAA 59.505 34.615 2.62 0.00 42.67 1.90
23 24 6.013379 TGGCAAGGAAACCTTAATGTTCATA 58.987 36.000 2.62 0.00 42.67 2.15
24 25 4.837860 TGGCAAGGAAACCTTAATGTTCAT 59.162 37.500 2.62 0.00 42.67 2.57
25 26 4.219115 TGGCAAGGAAACCTTAATGTTCA 58.781 39.130 2.62 0.00 42.67 3.18
26 27 4.864704 TGGCAAGGAAACCTTAATGTTC 57.135 40.909 2.62 0.00 42.67 3.18
27 28 5.622346 TTTGGCAAGGAAACCTTAATGTT 57.378 34.783 0.00 0.00 42.67 2.71
28 29 5.622346 TTTTGGCAAGGAAACCTTAATGT 57.378 34.783 0.00 0.00 42.67 2.71
48 49 8.934507 TCATTTTAAAGAACGGTGTGATTTTT 57.065 26.923 0.00 0.00 0.00 1.94
49 50 8.977505 CATCATTTTAAAGAACGGTGTGATTTT 58.022 29.630 0.00 0.00 0.00 1.82
50 51 8.141268 ACATCATTTTAAAGAACGGTGTGATTT 58.859 29.630 0.00 0.00 0.00 2.17
51 52 7.657336 ACATCATTTTAAAGAACGGTGTGATT 58.343 30.769 0.00 0.00 0.00 2.57
52 53 7.214467 ACATCATTTTAAAGAACGGTGTGAT 57.786 32.000 0.00 0.00 0.00 3.06
53 54 6.627395 ACATCATTTTAAAGAACGGTGTGA 57.373 33.333 0.00 0.00 0.00 3.58
54 55 6.915300 TGAACATCATTTTAAAGAACGGTGTG 59.085 34.615 0.00 0.00 0.00 3.82
55 56 7.033530 TGAACATCATTTTAAAGAACGGTGT 57.966 32.000 0.00 0.00 0.00 4.16
56 57 7.647715 AGTTGAACATCATTTTAAAGAACGGTG 59.352 33.333 0.00 0.00 0.00 4.94
57 58 7.712797 AGTTGAACATCATTTTAAAGAACGGT 58.287 30.769 0.00 0.00 0.00 4.83
58 59 9.840427 ATAGTTGAACATCATTTTAAAGAACGG 57.160 29.630 0.00 0.00 0.00 4.44
67 68 9.829507 TTTTTGGACATAGTTGAACATCATTTT 57.170 25.926 0.00 0.00 0.00 1.82
69 70 9.426837 CATTTTTGGACATAGTTGAACATCATT 57.573 29.630 0.00 0.00 0.00 2.57
70 71 7.546667 GCATTTTTGGACATAGTTGAACATCAT 59.453 33.333 0.00 0.00 0.00 2.45
71 72 6.867816 GCATTTTTGGACATAGTTGAACATCA 59.132 34.615 0.00 0.00 0.00 3.07
72 73 7.062605 CAGCATTTTTGGACATAGTTGAACATC 59.937 37.037 0.00 0.00 0.00 3.06
73 74 6.869913 CAGCATTTTTGGACATAGTTGAACAT 59.130 34.615 0.00 0.00 0.00 2.71
74 75 6.040278 TCAGCATTTTTGGACATAGTTGAACA 59.960 34.615 0.00 0.00 0.00 3.18
75 76 6.446318 TCAGCATTTTTGGACATAGTTGAAC 58.554 36.000 0.00 0.00 0.00 3.18
76 77 6.647334 TCAGCATTTTTGGACATAGTTGAA 57.353 33.333 0.00 0.00 0.00 2.69
77 78 6.839124 ATCAGCATTTTTGGACATAGTTGA 57.161 33.333 0.00 0.00 0.00 3.18
78 79 7.988737 TCTATCAGCATTTTTGGACATAGTTG 58.011 34.615 0.00 0.00 0.00 3.16
79 80 8.462016 GTTCTATCAGCATTTTTGGACATAGTT 58.538 33.333 0.00 0.00 0.00 2.24
80 81 7.831193 AGTTCTATCAGCATTTTTGGACATAGT 59.169 33.333 0.00 0.00 0.00 2.12
81 82 8.218338 AGTTCTATCAGCATTTTTGGACATAG 57.782 34.615 0.00 0.00 0.00 2.23
82 83 7.828717 TGAGTTCTATCAGCATTTTTGGACATA 59.171 33.333 0.00 0.00 0.00 2.29
83 84 6.660521 TGAGTTCTATCAGCATTTTTGGACAT 59.339 34.615 0.00 0.00 0.00 3.06
84 85 6.003326 TGAGTTCTATCAGCATTTTTGGACA 58.997 36.000 0.00 0.00 0.00 4.02
85 86 6.500684 TGAGTTCTATCAGCATTTTTGGAC 57.499 37.500 0.00 0.00 0.00 4.02
86 87 7.707624 ATTGAGTTCTATCAGCATTTTTGGA 57.292 32.000 0.00 0.00 0.00 3.53
87 88 8.030692 TCAATTGAGTTCTATCAGCATTTTTGG 58.969 33.333 3.38 0.00 0.00 3.28
88 89 8.975410 TCAATTGAGTTCTATCAGCATTTTTG 57.025 30.769 3.38 0.00 0.00 2.44
89 90 9.985730 TTTCAATTGAGTTCTATCAGCATTTTT 57.014 25.926 8.41 0.00 0.00 1.94
91 92 9.798994 GATTTCAATTGAGTTCTATCAGCATTT 57.201 29.630 8.41 0.00 0.00 2.32
92 93 8.411683 GGATTTCAATTGAGTTCTATCAGCATT 58.588 33.333 8.41 0.00 0.00 3.56
93 94 7.558807 TGGATTTCAATTGAGTTCTATCAGCAT 59.441 33.333 8.41 0.00 0.00 3.79
94 95 6.885918 TGGATTTCAATTGAGTTCTATCAGCA 59.114 34.615 8.41 0.44 0.00 4.41
95 96 7.325660 TGGATTTCAATTGAGTTCTATCAGC 57.674 36.000 8.41 0.00 0.00 4.26
96 97 9.117183 TGATGGATTTCAATTGAGTTCTATCAG 57.883 33.333 26.87 0.00 33.84 2.90
97 98 9.117183 CTGATGGATTTCAATTGAGTTCTATCA 57.883 33.333 27.72 27.72 35.04 2.15
98 99 8.566260 CCTGATGGATTTCAATTGAGTTCTATC 58.434 37.037 24.12 24.12 34.57 2.08
99 100 7.504911 CCCTGATGGATTTCAATTGAGTTCTAT 59.495 37.037 8.41 12.13 35.39 1.98
100 101 6.830324 CCCTGATGGATTTCAATTGAGTTCTA 59.170 38.462 8.41 8.03 35.39 2.10
101 102 5.655532 CCCTGATGGATTTCAATTGAGTTCT 59.344 40.000 8.41 0.00 35.39 3.01
102 103 5.653769 TCCCTGATGGATTTCAATTGAGTTC 59.346 40.000 8.41 9.32 38.61 3.01
103 104 5.582953 TCCCTGATGGATTTCAATTGAGTT 58.417 37.500 8.41 0.00 38.61 3.01
104 105 5.197224 TCCCTGATGGATTTCAATTGAGT 57.803 39.130 8.41 1.61 38.61 3.41
116 117 1.153539 TTTTGTGGGTCCCTGATGGA 58.846 50.000 10.00 0.00 42.41 3.41
117 118 2.008242 TTTTTGTGGGTCCCTGATGG 57.992 50.000 10.00 0.00 0.00 3.51
149 150 7.403312 TGTGGATGAACTTTCTCTTGAAAAA 57.597 32.000 0.00 0.00 41.09 1.94
150 151 7.403312 TTGTGGATGAACTTTCTCTTGAAAA 57.597 32.000 0.00 0.00 41.09 2.29
151 152 7.285172 TCATTGTGGATGAACTTTCTCTTGAAA 59.715 33.333 0.00 0.00 41.73 2.69
152 153 6.772233 TCATTGTGGATGAACTTTCTCTTGAA 59.228 34.615 0.00 0.00 41.73 2.69
153 154 6.298361 TCATTGTGGATGAACTTTCTCTTGA 58.702 36.000 0.00 0.00 41.73 3.02
154 155 6.564709 TCATTGTGGATGAACTTTCTCTTG 57.435 37.500 0.00 0.00 41.73 3.02
168 169 8.136800 GCATGATATAAACAACATCATTGTGGA 58.863 33.333 0.00 0.00 37.31 4.02
169 170 7.383029 GGCATGATATAAACAACATCATTGTGG 59.617 37.037 0.00 0.00 37.31 4.17
170 171 7.921745 TGGCATGATATAAACAACATCATTGTG 59.078 33.333 0.00 0.00 37.31 3.33
171 172 8.009622 TGGCATGATATAAACAACATCATTGT 57.990 30.769 0.00 0.00 37.31 2.71
172 173 8.874744 TTGGCATGATATAAACAACATCATTG 57.125 30.769 0.00 0.00 37.31 2.82
173 174 9.483916 CATTGGCATGATATAAACAACATCATT 57.516 29.630 0.00 0.00 37.31 2.57
174 175 8.092068 CCATTGGCATGATATAAACAACATCAT 58.908 33.333 0.00 0.00 39.42 2.45
175 176 7.435305 CCATTGGCATGATATAAACAACATCA 58.565 34.615 0.00 0.00 33.47 3.07
176 177 7.878477 CCATTGGCATGATATAAACAACATC 57.122 36.000 0.00 0.00 31.07 3.06
193 194 9.161629 AACTTTTAGTTTAATAATGCCATTGGC 57.838 29.630 21.12 21.12 41.87 4.52
205 206 9.639601 GGCTTTGATGCTAACTTTTAGTTTAAT 57.360 29.630 0.00 0.00 39.51 1.40
206 207 8.634444 TGGCTTTGATGCTAACTTTTAGTTTAA 58.366 29.630 0.00 0.00 39.51 1.52
207 208 8.079809 GTGGCTTTGATGCTAACTTTTAGTTTA 58.920 33.333 0.00 0.00 39.51 2.01
208 209 6.923508 GTGGCTTTGATGCTAACTTTTAGTTT 59.076 34.615 0.00 0.00 39.51 2.66
209 210 6.265422 AGTGGCTTTGATGCTAACTTTTAGTT 59.735 34.615 0.00 0.00 41.97 2.24
210 211 5.770162 AGTGGCTTTGATGCTAACTTTTAGT 59.230 36.000 0.00 0.00 30.06 2.24
211 212 6.259550 AGTGGCTTTGATGCTAACTTTTAG 57.740 37.500 0.00 0.00 30.06 1.85
212 213 5.183140 GGAGTGGCTTTGATGCTAACTTTTA 59.817 40.000 0.00 0.00 32.82 1.52
213 214 4.021981 GGAGTGGCTTTGATGCTAACTTTT 60.022 41.667 0.00 0.00 32.82 2.27
214 215 3.507622 GGAGTGGCTTTGATGCTAACTTT 59.492 43.478 0.00 0.00 32.82 2.66
215 216 3.084786 GGAGTGGCTTTGATGCTAACTT 58.915 45.455 0.00 0.00 32.82 2.66
216 217 2.307098 AGGAGTGGCTTTGATGCTAACT 59.693 45.455 0.00 0.00 34.39 2.24
217 218 2.716217 AGGAGTGGCTTTGATGCTAAC 58.284 47.619 0.00 0.00 0.00 2.34
218 219 3.439857 AAGGAGTGGCTTTGATGCTAA 57.560 42.857 0.00 0.00 0.00 3.09
219 220 3.009473 AGAAAGGAGTGGCTTTGATGCTA 59.991 43.478 0.00 0.00 0.00 3.49
220 221 2.165998 GAAAGGAGTGGCTTTGATGCT 58.834 47.619 0.00 0.00 0.00 3.79
221 222 2.165998 AGAAAGGAGTGGCTTTGATGC 58.834 47.619 0.00 0.00 0.00 3.91
222 223 4.326826 TGTAGAAAGGAGTGGCTTTGATG 58.673 43.478 0.00 0.00 0.00 3.07
223 224 4.640771 TGTAGAAAGGAGTGGCTTTGAT 57.359 40.909 0.00 0.00 0.00 2.57
224 225 4.202461 ACATGTAGAAAGGAGTGGCTTTGA 60.202 41.667 0.00 0.00 0.00 2.69
225 226 4.074970 ACATGTAGAAAGGAGTGGCTTTG 58.925 43.478 0.00 0.00 0.00 2.77
226 227 4.202461 TGACATGTAGAAAGGAGTGGCTTT 60.202 41.667 0.00 0.00 0.00 3.51
227 228 3.327757 TGACATGTAGAAAGGAGTGGCTT 59.672 43.478 0.00 0.00 0.00 4.35
228 229 2.906389 TGACATGTAGAAAGGAGTGGCT 59.094 45.455 0.00 0.00 0.00 4.75
229 230 3.334583 TGACATGTAGAAAGGAGTGGC 57.665 47.619 0.00 0.00 0.00 5.01
230 231 6.824305 ATTTTGACATGTAGAAAGGAGTGG 57.176 37.500 0.00 0.00 0.00 4.00
279 280 3.505449 CGCAGCGTATTCTTATGGAAC 57.495 47.619 6.65 0.00 36.70 3.62
295 296 4.244066 AGCTAGATATGATTGAAGCGCAG 58.756 43.478 11.47 0.00 35.17 5.18
296 297 4.021632 AGAGCTAGATATGATTGAAGCGCA 60.022 41.667 11.47 0.00 35.17 6.09
297 298 4.326817 CAGAGCTAGATATGATTGAAGCGC 59.673 45.833 0.00 0.00 35.17 5.92
298 299 5.468592 ACAGAGCTAGATATGATTGAAGCG 58.531 41.667 10.02 0.00 35.17 4.68
299 300 6.365789 GTGACAGAGCTAGATATGATTGAAGC 59.634 42.308 10.02 0.00 0.00 3.86
300 301 6.581919 CGTGACAGAGCTAGATATGATTGAAG 59.418 42.308 10.02 0.00 0.00 3.02
301 302 6.442112 CGTGACAGAGCTAGATATGATTGAA 58.558 40.000 10.02 0.00 0.00 2.69
302 303 5.048434 CCGTGACAGAGCTAGATATGATTGA 60.048 44.000 10.02 0.00 0.00 2.57
303 304 5.159925 CCGTGACAGAGCTAGATATGATTG 58.840 45.833 10.02 0.00 0.00 2.67
304 305 4.830046 ACCGTGACAGAGCTAGATATGATT 59.170 41.667 10.02 0.00 0.00 2.57
305 306 4.402829 ACCGTGACAGAGCTAGATATGAT 58.597 43.478 10.02 0.00 0.00 2.45
306 307 3.815962 GACCGTGACAGAGCTAGATATGA 59.184 47.826 10.02 0.00 0.00 2.15
307 308 3.364465 CGACCGTGACAGAGCTAGATATG 60.364 52.174 0.09 0.09 0.00 1.78
308 309 2.809119 CGACCGTGACAGAGCTAGATAT 59.191 50.000 0.00 0.00 0.00 1.63
309 310 2.159000 TCGACCGTGACAGAGCTAGATA 60.159 50.000 0.00 0.00 0.00 1.98
310 311 1.018148 CGACCGTGACAGAGCTAGAT 58.982 55.000 0.00 0.00 0.00 1.98
311 312 0.036671 TCGACCGTGACAGAGCTAGA 60.037 55.000 0.00 0.00 0.00 2.43
312 313 0.803117 TTCGACCGTGACAGAGCTAG 59.197 55.000 0.00 0.00 0.00 3.42
313 314 0.803117 CTTCGACCGTGACAGAGCTA 59.197 55.000 0.00 0.00 0.00 3.32
314 315 0.889638 TCTTCGACCGTGACAGAGCT 60.890 55.000 0.00 0.00 0.00 4.09
315 316 0.729816 GTCTTCGACCGTGACAGAGC 60.730 60.000 11.06 0.00 0.00 4.09
316 317 0.109689 GGTCTTCGACCGTGACAGAG 60.110 60.000 15.24 0.00 43.14 3.35
317 318 1.954528 GGTCTTCGACCGTGACAGA 59.045 57.895 15.24 0.00 43.14 3.41
318 319 4.554163 GGTCTTCGACCGTGACAG 57.446 61.111 15.24 0.00 43.14 3.51
326 327 2.611518 CTCCTCATTGTGGTCTTCGAC 58.388 52.381 4.76 0.00 0.00 4.20
327 328 1.066858 GCTCCTCATTGTGGTCTTCGA 60.067 52.381 4.76 0.00 0.00 3.71
328 329 1.363744 GCTCCTCATTGTGGTCTTCG 58.636 55.000 4.76 0.00 0.00 3.79
329 330 1.680249 GGGCTCCTCATTGTGGTCTTC 60.680 57.143 4.76 0.00 0.00 2.87
330 331 0.329596 GGGCTCCTCATTGTGGTCTT 59.670 55.000 4.76 0.00 0.00 3.01
331 332 1.566298 GGGGCTCCTCATTGTGGTCT 61.566 60.000 0.00 0.00 0.00 3.85
332 333 1.077429 GGGGCTCCTCATTGTGGTC 60.077 63.158 0.00 0.00 0.00 4.02
333 334 1.217057 ATGGGGCTCCTCATTGTGGT 61.217 55.000 3.07 0.00 0.00 4.16
334 335 0.754217 CATGGGGCTCCTCATTGTGG 60.754 60.000 3.07 0.00 0.00 4.17
335 336 0.256752 TCATGGGGCTCCTCATTGTG 59.743 55.000 3.07 0.00 0.00 3.33
336 337 1.133575 CATCATGGGGCTCCTCATTGT 60.134 52.381 3.07 0.00 0.00 2.71
337 338 1.617322 CATCATGGGGCTCCTCATTG 58.383 55.000 3.07 0.00 0.00 2.82
338 339 0.481567 CCATCATGGGGCTCCTCATT 59.518 55.000 3.07 0.00 32.67 2.57
339 340 0.700269 ACCATCATGGGGCTCCTCAT 60.700 55.000 9.04 0.00 43.37 2.90
340 341 0.030195 TACCATCATGGGGCTCCTCA 60.030 55.000 9.04 0.00 43.37 3.86
341 342 0.398318 GTACCATCATGGGGCTCCTC 59.602 60.000 9.04 0.00 43.37 3.71
342 343 1.062488 GGTACCATCATGGGGCTCCT 61.062 60.000 9.04 0.00 43.37 3.69
343 344 1.352622 TGGTACCATCATGGGGCTCC 61.353 60.000 11.60 0.00 43.37 4.70
344 345 0.550914 TTGGTACCATCATGGGGCTC 59.449 55.000 17.17 0.00 43.37 4.70
345 346 0.258774 GTTGGTACCATCATGGGGCT 59.741 55.000 17.17 0.00 43.37 5.19
346 347 0.258774 AGTTGGTACCATCATGGGGC 59.741 55.000 22.15 0.00 43.37 5.80
347 348 1.563879 TGAGTTGGTACCATCATGGGG 59.436 52.381 22.15 0.00 43.37 4.96
348 349 3.137176 AGATGAGTTGGTACCATCATGGG 59.863 47.826 27.99 0.00 43.37 4.00
349 350 4.384056 GAGATGAGTTGGTACCATCATGG 58.616 47.826 27.99 0.54 45.02 3.66
350 351 4.384056 GGAGATGAGTTGGTACCATCATG 58.616 47.826 27.99 0.00 35.84 3.07
351 352 3.392616 GGGAGATGAGTTGGTACCATCAT 59.607 47.826 24.70 24.70 35.84 2.45
352 353 2.771943 GGGAGATGAGTTGGTACCATCA 59.228 50.000 22.15 20.24 35.84 3.07
353 354 2.771943 TGGGAGATGAGTTGGTACCATC 59.228 50.000 17.17 15.47 34.68 3.51
354 355 2.845659 TGGGAGATGAGTTGGTACCAT 58.154 47.619 17.17 0.30 0.00 3.55
355 356 2.335681 TGGGAGATGAGTTGGTACCA 57.664 50.000 11.60 11.60 0.00 3.25
356 357 2.158755 CCATGGGAGATGAGTTGGTACC 60.159 54.545 4.43 4.43 0.00 3.34
357 358 2.158755 CCCATGGGAGATGAGTTGGTAC 60.159 54.545 28.27 0.00 37.50 3.34
358 359 2.126882 CCCATGGGAGATGAGTTGGTA 58.873 52.381 28.27 0.00 37.50 3.25
359 360 0.921896 CCCATGGGAGATGAGTTGGT 59.078 55.000 28.27 0.00 37.50 3.67
360 361 3.815133 CCCATGGGAGATGAGTTGG 57.185 57.895 28.27 0.00 37.50 3.77
371 372 1.984026 GTTGTTGCCTCCCCATGGG 60.984 63.158 25.30 25.30 46.11 4.00
372 373 0.967380 GAGTTGTTGCCTCCCCATGG 60.967 60.000 4.14 4.14 0.00 3.66
373 374 0.251297 TGAGTTGTTGCCTCCCCATG 60.251 55.000 0.00 0.00 0.00 3.66
374 375 0.251341 GTGAGTTGTTGCCTCCCCAT 60.251 55.000 0.00 0.00 0.00 4.00
375 376 1.150536 GTGAGTTGTTGCCTCCCCA 59.849 57.895 0.00 0.00 0.00 4.96
376 377 1.966451 CGTGAGTTGTTGCCTCCCC 60.966 63.158 0.00 0.00 0.00 4.81
377 378 1.966451 CCGTGAGTTGTTGCCTCCC 60.966 63.158 0.00 0.00 0.00 4.30
378 379 1.227853 ACCGTGAGTTGTTGCCTCC 60.228 57.895 0.00 0.00 0.00 4.30
379 380 1.507141 CCACCGTGAGTTGTTGCCTC 61.507 60.000 0.00 0.00 0.00 4.70
380 381 1.525995 CCACCGTGAGTTGTTGCCT 60.526 57.895 0.00 0.00 0.00 4.75
381 382 1.525077 TCCACCGTGAGTTGTTGCC 60.525 57.895 0.00 0.00 0.00 4.52
382 383 1.647084 GTCCACCGTGAGTTGTTGC 59.353 57.895 0.00 0.00 0.00 4.17
383 384 0.179056 AGGTCCACCGTGAGTTGTTG 60.179 55.000 0.00 0.00 42.08 3.33
384 385 1.343465 CTAGGTCCACCGTGAGTTGTT 59.657 52.381 0.00 0.00 42.08 2.83
385 386 0.966920 CTAGGTCCACCGTGAGTTGT 59.033 55.000 0.00 0.00 42.08 3.32
386 387 0.966920 ACTAGGTCCACCGTGAGTTG 59.033 55.000 0.00 0.00 42.08 3.16
387 388 0.966920 CACTAGGTCCACCGTGAGTT 59.033 55.000 0.00 0.00 42.08 3.01
388 389 0.178970 ACACTAGGTCCACCGTGAGT 60.179 55.000 9.90 3.69 42.08 3.41
389 390 0.526662 GACACTAGGTCCACCGTGAG 59.473 60.000 9.90 3.15 40.83 3.51
390 391 0.178984 TGACACTAGGTCCACCGTGA 60.179 55.000 9.90 0.00 46.38 4.35
391 392 0.677288 TTGACACTAGGTCCACCGTG 59.323 55.000 8.36 3.06 46.38 4.94
392 393 1.275291 CATTGACACTAGGTCCACCGT 59.725 52.381 8.36 0.00 46.38 4.83
393 394 1.405526 CCATTGACACTAGGTCCACCG 60.406 57.143 8.36 0.00 46.38 4.94
394 395 1.628846 ACCATTGACACTAGGTCCACC 59.371 52.381 8.36 0.00 46.38 4.61
395 396 3.074412 CAACCATTGACACTAGGTCCAC 58.926 50.000 8.36 0.00 46.38 4.02
396 397 2.708861 ACAACCATTGACACTAGGTCCA 59.291 45.455 8.36 0.00 46.38 4.02
397 398 3.074412 CACAACCATTGACACTAGGTCC 58.926 50.000 8.36 0.00 46.38 4.46
399 400 2.708861 TCCACAACCATTGACACTAGGT 59.291 45.455 0.00 0.00 35.47 3.08
400 401 3.417069 TCCACAACCATTGACACTAGG 57.583 47.619 0.00 0.00 0.00 3.02
401 402 3.941483 GGATCCACAACCATTGACACTAG 59.059 47.826 6.95 0.00 0.00 2.57
402 403 3.618752 CGGATCCACAACCATTGACACTA 60.619 47.826 13.41 0.00 0.00 2.74
403 404 2.795329 GGATCCACAACCATTGACACT 58.205 47.619 6.95 0.00 0.00 3.55
404 405 1.468520 CGGATCCACAACCATTGACAC 59.531 52.381 13.41 0.00 0.00 3.67
405 406 1.819928 CGGATCCACAACCATTGACA 58.180 50.000 13.41 0.00 0.00 3.58
406 407 0.451783 GCGGATCCACAACCATTGAC 59.548 55.000 13.41 0.00 0.00 3.18
407 408 0.679640 GGCGGATCCACAACCATTGA 60.680 55.000 13.41 0.00 34.01 2.57
408 409 1.809207 GGCGGATCCACAACCATTG 59.191 57.895 13.41 0.00 34.01 2.82
409 410 1.748879 CGGCGGATCCACAACCATT 60.749 57.895 13.41 0.00 34.01 3.16
410 411 2.124736 CGGCGGATCCACAACCAT 60.125 61.111 13.41 0.00 34.01 3.55
413 414 3.799755 GTGCGGCGGATCCACAAC 61.800 66.667 13.41 0.00 34.01 3.32
432 433 2.365408 AAATGGAGGTCGAACTCGTC 57.635 50.000 23.62 11.80 38.39 4.20
433 434 2.094338 GGTAAATGGAGGTCGAACTCGT 60.094 50.000 23.62 12.45 38.39 4.18
434 435 2.165845 AGGTAAATGGAGGTCGAACTCG 59.834 50.000 23.62 0.00 38.39 4.18
435 436 3.194968 TGAGGTAAATGGAGGTCGAACTC 59.805 47.826 22.62 22.62 36.76 3.01
436 437 3.170717 TGAGGTAAATGGAGGTCGAACT 58.829 45.455 0.34 0.34 0.00 3.01
437 438 3.604875 TGAGGTAAATGGAGGTCGAAC 57.395 47.619 0.00 0.00 0.00 3.95
438 439 3.134081 GGATGAGGTAAATGGAGGTCGAA 59.866 47.826 0.00 0.00 0.00 3.71
439 440 2.698797 GGATGAGGTAAATGGAGGTCGA 59.301 50.000 0.00 0.00 0.00 4.20
440 441 2.545952 CGGATGAGGTAAATGGAGGTCG 60.546 54.545 0.00 0.00 0.00 4.79
441 442 2.434702 ACGGATGAGGTAAATGGAGGTC 59.565 50.000 0.00 0.00 0.00 3.85
442 443 2.170607 CACGGATGAGGTAAATGGAGGT 59.829 50.000 0.00 0.00 0.00 3.85
443 444 2.434336 TCACGGATGAGGTAAATGGAGG 59.566 50.000 0.00 0.00 0.00 4.30
444 445 3.819564 TCACGGATGAGGTAAATGGAG 57.180 47.619 0.00 0.00 0.00 3.86
455 456 1.114627 CACCATCTCCTCACGGATGA 58.885 55.000 0.00 0.00 41.05 2.92
456 457 0.105593 CCACCATCTCCTCACGGATG 59.894 60.000 0.00 0.00 39.01 3.51
457 458 0.032117 TCCACCATCTCCTCACGGAT 60.032 55.000 0.00 0.00 39.01 4.18
458 459 0.032117 ATCCACCATCTCCTCACGGA 60.032 55.000 0.00 0.00 37.82 4.69
459 460 0.105593 CATCCACCATCTCCTCACGG 59.894 60.000 0.00 0.00 0.00 4.94
460 461 0.531532 GCATCCACCATCTCCTCACG 60.532 60.000 0.00 0.00 0.00 4.35
461 462 0.543277 TGCATCCACCATCTCCTCAC 59.457 55.000 0.00 0.00 0.00 3.51
462 463 0.835276 CTGCATCCACCATCTCCTCA 59.165 55.000 0.00 0.00 0.00 3.86
463 464 0.108207 CCTGCATCCACCATCTCCTC 59.892 60.000 0.00 0.00 0.00 3.71
464 465 1.351080 CCCTGCATCCACCATCTCCT 61.351 60.000 0.00 0.00 0.00 3.69
465 466 1.150081 CCCTGCATCCACCATCTCC 59.850 63.158 0.00 0.00 0.00 3.71
466 467 0.179034 GTCCCTGCATCCACCATCTC 60.179 60.000 0.00 0.00 0.00 2.75
467 468 0.622738 AGTCCCTGCATCCACCATCT 60.623 55.000 0.00 0.00 0.00 2.90
468 469 0.179034 GAGTCCCTGCATCCACCATC 60.179 60.000 0.00 0.00 0.00 3.51
469 470 1.639635 GGAGTCCCTGCATCCACCAT 61.640 60.000 0.00 0.00 33.08 3.55
470 471 2.300967 GGAGTCCCTGCATCCACCA 61.301 63.158 0.00 0.00 33.08 4.17
471 472 2.592308 GGAGTCCCTGCATCCACC 59.408 66.667 0.00 0.00 33.08 4.61
472 473 1.690219 ATCGGAGTCCCTGCATCCAC 61.690 60.000 2.80 0.00 32.31 4.02
473 474 0.105709 TATCGGAGTCCCTGCATCCA 60.106 55.000 2.80 0.00 32.31 3.41
474 475 1.048601 TTATCGGAGTCCCTGCATCC 58.951 55.000 2.80 0.00 0.00 3.51
475 476 2.365617 TCTTTATCGGAGTCCCTGCATC 59.634 50.000 2.80 0.00 0.00 3.91
476 477 2.398588 TCTTTATCGGAGTCCCTGCAT 58.601 47.619 2.80 0.00 0.00 3.96
477 478 1.860641 TCTTTATCGGAGTCCCTGCA 58.139 50.000 2.80 0.00 0.00 4.41
478 479 2.483889 CCTTCTTTATCGGAGTCCCTGC 60.484 54.545 2.80 0.00 0.00 4.85
479 480 3.031736 TCCTTCTTTATCGGAGTCCCTG 58.968 50.000 2.80 0.00 0.00 4.45
480 481 3.301274 CTCCTTCTTTATCGGAGTCCCT 58.699 50.000 2.80 0.00 39.54 4.20
481 482 2.365941 CCTCCTTCTTTATCGGAGTCCC 59.634 54.545 2.80 0.00 42.17 4.46
482 483 2.224090 GCCTCCTTCTTTATCGGAGTCC 60.224 54.545 0.00 0.00 42.17 3.85
483 484 2.696187 AGCCTCCTTCTTTATCGGAGTC 59.304 50.000 0.00 0.00 42.17 3.36
484 485 2.753247 AGCCTCCTTCTTTATCGGAGT 58.247 47.619 0.00 0.00 42.17 3.85
485 486 3.828875 AAGCCTCCTTCTTTATCGGAG 57.171 47.619 0.00 0.00 43.11 4.63
486 487 3.641906 CCTAAGCCTCCTTCTTTATCGGA 59.358 47.826 0.00 0.00 32.47 4.55
487 488 3.641906 TCCTAAGCCTCCTTCTTTATCGG 59.358 47.826 0.00 0.00 32.47 4.18
488 489 4.939052 TCCTAAGCCTCCTTCTTTATCG 57.061 45.455 0.00 0.00 32.47 2.92
489 490 7.162761 GGTTATCCTAAGCCTCCTTCTTTATC 58.837 42.308 0.00 0.00 32.47 1.75
490 491 6.619852 TGGTTATCCTAAGCCTCCTTCTTTAT 59.380 38.462 0.00 0.00 32.47 1.40
491 492 5.968167 TGGTTATCCTAAGCCTCCTTCTTTA 59.032 40.000 0.00 0.00 32.47 1.85
492 493 4.788617 TGGTTATCCTAAGCCTCCTTCTTT 59.211 41.667 0.00 0.00 32.47 2.52
493 494 4.371681 TGGTTATCCTAAGCCTCCTTCTT 58.628 43.478 0.00 0.00 32.47 2.52
494 495 4.008916 TGGTTATCCTAAGCCTCCTTCT 57.991 45.455 0.00 0.00 32.47 2.85
495 496 4.348168 TGATGGTTATCCTAAGCCTCCTTC 59.652 45.833 0.00 0.00 32.09 3.46
496 497 4.307259 TGATGGTTATCCTAAGCCTCCTT 58.693 43.478 0.00 0.00 32.09 3.36
497 498 3.941629 TGATGGTTATCCTAAGCCTCCT 58.058 45.455 0.00 0.00 32.09 3.69
498 499 4.566488 CCATGATGGTTATCCTAAGCCTCC 60.566 50.000 2.54 0.00 31.35 4.30
499 500 4.566488 CCCATGATGGTTATCCTAAGCCTC 60.566 50.000 11.09 0.00 35.17 4.70
500 501 3.331889 CCCATGATGGTTATCCTAAGCCT 59.668 47.826 11.09 0.00 35.17 4.58
501 502 3.330701 TCCCATGATGGTTATCCTAAGCC 59.669 47.826 11.09 0.00 35.17 4.35
502 503 4.640771 TCCCATGATGGTTATCCTAAGC 57.359 45.455 11.09 0.00 35.17 3.09
503 504 5.310594 TCCTTCCCATGATGGTTATCCTAAG 59.689 44.000 11.09 2.72 37.17 2.18
504 505 5.231552 TCCTTCCCATGATGGTTATCCTAA 58.768 41.667 11.09 0.00 37.17 2.69
505 506 4.838403 TCCTTCCCATGATGGTTATCCTA 58.162 43.478 11.09 0.00 37.17 2.94
506 507 3.680169 TCCTTCCCATGATGGTTATCCT 58.320 45.455 11.09 0.00 37.17 3.24
507 508 4.043310 TCATCCTTCCCATGATGGTTATCC 59.957 45.833 11.09 0.00 39.06 2.59
508 509 5.246981 TCATCCTTCCCATGATGGTTATC 57.753 43.478 11.09 0.00 39.06 1.75
509 510 4.508047 GCTCATCCTTCCCATGATGGTTAT 60.508 45.833 11.09 0.00 39.06 1.89
510 511 3.181440 GCTCATCCTTCCCATGATGGTTA 60.181 47.826 11.09 0.00 39.06 2.85
511 512 2.423947 GCTCATCCTTCCCATGATGGTT 60.424 50.000 11.09 0.00 39.06 3.67
512 513 1.144503 GCTCATCCTTCCCATGATGGT 59.855 52.381 11.09 0.00 39.06 3.55
513 514 1.881072 CGCTCATCCTTCCCATGATGG 60.881 57.143 3.98 3.98 39.06 3.51
514 515 1.202734 ACGCTCATCCTTCCCATGATG 60.203 52.381 0.00 0.00 39.75 3.07
515 516 1.135094 ACGCTCATCCTTCCCATGAT 58.865 50.000 0.00 0.00 29.78 2.45
516 517 0.178767 CACGCTCATCCTTCCCATGA 59.821 55.000 0.00 0.00 0.00 3.07
517 518 0.178767 TCACGCTCATCCTTCCCATG 59.821 55.000 0.00 0.00 0.00 3.66
518 519 1.071385 GATCACGCTCATCCTTCCCAT 59.929 52.381 0.00 0.00 0.00 4.00
519 520 0.465705 GATCACGCTCATCCTTCCCA 59.534 55.000 0.00 0.00 0.00 4.37
520 521 0.465705 TGATCACGCTCATCCTTCCC 59.534 55.000 0.00 0.00 0.00 3.97
521 522 1.576356 GTGATCACGCTCATCCTTCC 58.424 55.000 10.69 0.00 0.00 3.46
533 534 0.809385 TTCGTCTCCTCCGTGATCAC 59.191 55.000 16.21 16.21 0.00 3.06
534 535 0.809385 GTTCGTCTCCTCCGTGATCA 59.191 55.000 0.00 0.00 0.00 2.92
535 536 1.064357 GAGTTCGTCTCCTCCGTGATC 59.936 57.143 0.00 0.00 37.22 2.92
536 537 1.096416 GAGTTCGTCTCCTCCGTGAT 58.904 55.000 0.34 0.00 37.22 3.06
537 538 0.250597 TGAGTTCGTCTCCTCCGTGA 60.251 55.000 7.61 0.00 42.12 4.35
538 539 0.596577 TTGAGTTCGTCTCCTCCGTG 59.403 55.000 7.61 0.00 42.12 4.94
539 540 1.202582 CATTGAGTTCGTCTCCTCCGT 59.797 52.381 7.61 0.00 42.12 4.69
540 541 1.472878 TCATTGAGTTCGTCTCCTCCG 59.527 52.381 7.61 0.00 42.12 4.63
541 542 2.494073 ACTCATTGAGTTCGTCTCCTCC 59.506 50.000 13.61 0.00 40.28 4.30
542 543 3.859411 ACTCATTGAGTTCGTCTCCTC 57.141 47.619 13.61 0.00 40.28 3.71
543 544 4.950475 TCATACTCATTGAGTTCGTCTCCT 59.050 41.667 23.53 0.00 40.28 3.69
544 545 5.038033 GTCATACTCATTGAGTTCGTCTCC 58.962 45.833 23.53 3.77 40.28 3.71
545 546 4.731000 CGTCATACTCATTGAGTTCGTCTC 59.269 45.833 23.53 9.57 40.28 3.36
546 547 4.156190 ACGTCATACTCATTGAGTTCGTCT 59.844 41.667 23.53 1.22 40.28 4.18
547 548 4.413087 ACGTCATACTCATTGAGTTCGTC 58.587 43.478 23.53 11.92 40.28 4.20
548 549 4.413087 GACGTCATACTCATTGAGTTCGT 58.587 43.478 23.53 23.97 40.28 3.85
549 550 3.478874 CGACGTCATACTCATTGAGTTCG 59.521 47.826 23.53 19.83 40.28 3.95
550 551 4.413087 ACGACGTCATACTCATTGAGTTC 58.587 43.478 23.53 13.01 40.28 3.01
551 552 4.436242 ACGACGTCATACTCATTGAGTT 57.564 40.909 23.53 9.62 40.28 3.01
552 553 4.166523 CAACGACGTCATACTCATTGAGT 58.833 43.478 22.16 22.16 45.54 3.41
553 554 4.166523 ACAACGACGTCATACTCATTGAG 58.833 43.478 17.16 12.17 35.52 3.02
554 555 4.163552 GACAACGACGTCATACTCATTGA 58.836 43.478 17.16 0.00 35.88 2.57
555 556 3.917985 TGACAACGACGTCATACTCATTG 59.082 43.478 17.16 9.70 40.94 2.82
556 557 4.168922 TGACAACGACGTCATACTCATT 57.831 40.909 17.16 0.00 40.94 2.57
557 558 3.842732 TGACAACGACGTCATACTCAT 57.157 42.857 17.16 0.00 40.94 2.90
565 566 1.467713 GGAGGAGATGACAACGACGTC 60.468 57.143 5.18 5.18 36.40 4.34
566 567 0.526662 GGAGGAGATGACAACGACGT 59.473 55.000 0.00 0.00 0.00 4.34
567 568 0.523546 CGGAGGAGATGACAACGACG 60.524 60.000 0.00 0.00 0.00 5.12
568 569 0.809385 TCGGAGGAGATGACAACGAC 59.191 55.000 0.00 0.00 0.00 4.34
569 570 0.809385 GTCGGAGGAGATGACAACGA 59.191 55.000 0.00 0.00 32.91 3.85
570 571 0.811915 AGTCGGAGGAGATGACAACG 59.188 55.000 0.00 0.00 35.09 4.10
571 572 1.135333 GGAGTCGGAGGAGATGACAAC 59.865 57.143 0.00 0.00 35.09 3.32
572 573 1.475403 GGAGTCGGAGGAGATGACAA 58.525 55.000 0.00 0.00 35.09 3.18
573 574 0.748367 CGGAGTCGGAGGAGATGACA 60.748 60.000 0.00 0.00 35.09 3.58
574 575 0.464013 TCGGAGTCGGAGGAGATGAC 60.464 60.000 0.00 0.00 36.95 3.06
575 576 0.179043 CTCGGAGTCGGAGGAGATGA 60.179 60.000 17.69 0.00 36.95 2.92
576 577 1.169661 CCTCGGAGTCGGAGGAGATG 61.170 65.000 32.91 12.30 36.49 2.90
577 578 1.149627 CCTCGGAGTCGGAGGAGAT 59.850 63.158 32.91 0.00 36.49 2.75
578 579 1.346479 ATCCTCGGAGTCGGAGGAGA 61.346 60.000 37.58 24.97 41.90 3.71
579 580 1.149627 ATCCTCGGAGTCGGAGGAG 59.850 63.158 37.58 20.62 41.90 3.69
580 581 1.152943 CATCCTCGGAGTCGGAGGA 60.153 63.158 37.41 37.41 42.37 3.71
581 582 1.152943 TCATCCTCGGAGTCGGAGG 60.153 63.158 31.40 31.40 36.06 4.30
582 583 1.169661 CCTCATCCTCGGAGTCGGAG 61.170 65.000 18.34 18.34 36.95 4.63
583 584 1.152943 CCTCATCCTCGGAGTCGGA 60.153 63.158 4.02 0.00 36.95 4.55
584 585 2.851071 GCCTCATCCTCGGAGTCGG 61.851 68.421 4.02 0.00 36.95 4.79
585 586 2.725008 GCCTCATCCTCGGAGTCG 59.275 66.667 4.02 0.00 37.82 4.18
586 587 0.178987 TAGGCCTCATCCTCGGAGTC 60.179 60.000 9.68 0.00 37.66 3.36
587 588 0.178975 CTAGGCCTCATCCTCGGAGT 60.179 60.000 9.68 0.00 37.66 3.85
588 589 0.897863 CCTAGGCCTCATCCTCGGAG 60.898 65.000 9.68 0.00 40.51 4.63
589 590 1.153989 CCTAGGCCTCATCCTCGGA 59.846 63.158 9.68 0.00 40.51 4.55
590 591 1.910772 CCCTAGGCCTCATCCTCGG 60.911 68.421 9.68 0.00 38.46 4.63
591 592 1.910772 CCCCTAGGCCTCATCCTCG 60.911 68.421 9.68 0.00 37.66 4.63
592 593 1.124477 CACCCCTAGGCCTCATCCTC 61.124 65.000 9.68 0.00 37.66 3.71
593 594 1.074167 CACCCCTAGGCCTCATCCT 60.074 63.158 9.68 0.00 40.21 3.24
594 595 2.150051 CCACCCCTAGGCCTCATCC 61.150 68.421 9.68 0.00 36.11 3.51
595 596 2.823758 GCCACCCCTAGGCCTCATC 61.824 68.421 9.68 0.00 46.50 2.92
596 597 2.774351 GCCACCCCTAGGCCTCAT 60.774 66.667 9.68 0.00 46.50 2.90
602 603 2.365105 TTCTCGGCCACCCCTAGG 60.365 66.667 2.24 0.06 40.04 3.02
603 604 1.265454 AACTTCTCGGCCACCCCTAG 61.265 60.000 2.24 0.00 0.00 3.02
604 605 0.838987 AAACTTCTCGGCCACCCCTA 60.839 55.000 2.24 0.00 0.00 3.53
605 606 0.838987 TAAACTTCTCGGCCACCCCT 60.839 55.000 2.24 0.00 0.00 4.79
606 607 0.037160 TTAAACTTCTCGGCCACCCC 59.963 55.000 2.24 0.00 0.00 4.95
607 608 1.162698 GTTAAACTTCTCGGCCACCC 58.837 55.000 2.24 0.00 0.00 4.61
608 609 1.162698 GGTTAAACTTCTCGGCCACC 58.837 55.000 2.24 0.00 0.00 4.61
609 610 2.180432 AGGTTAAACTTCTCGGCCAC 57.820 50.000 2.24 0.00 0.00 5.01
610 611 3.867216 GCTTAGGTTAAACTTCTCGGCCA 60.867 47.826 2.24 0.00 0.00 5.36
611 612 2.676839 GCTTAGGTTAAACTTCTCGGCC 59.323 50.000 0.00 0.00 0.00 6.13
612 613 3.597255 AGCTTAGGTTAAACTTCTCGGC 58.403 45.455 0.00 0.00 0.00 5.54
613 614 4.804665 GCTAGCTTAGGTTAAACTTCTCGG 59.195 45.833 7.70 0.00 0.00 4.63
614 615 5.652518 AGCTAGCTTAGGTTAAACTTCTCG 58.347 41.667 12.68 0.00 31.36 4.04
615 616 7.063662 GTGAAGCTAGCTTAGGTTAAACTTCTC 59.936 40.741 29.39 12.55 45.61 2.87
616 617 6.874664 GTGAAGCTAGCTTAGGTTAAACTTCT 59.125 38.462 29.39 2.40 45.61 2.85
617 618 6.874664 AGTGAAGCTAGCTTAGGTTAAACTTC 59.125 38.462 29.39 13.18 45.61 3.01
618 619 6.651225 CAGTGAAGCTAGCTTAGGTTAAACTT 59.349 38.462 29.39 3.13 45.61 2.66
619 620 6.166982 CAGTGAAGCTAGCTTAGGTTAAACT 58.833 40.000 29.39 18.81 45.61 2.66
620 621 5.932883 ACAGTGAAGCTAGCTTAGGTTAAAC 59.067 40.000 29.39 14.79 45.61 2.01
621 622 6.110411 ACAGTGAAGCTAGCTTAGGTTAAA 57.890 37.500 29.39 7.17 45.61 1.52
622 623 5.740290 ACAGTGAAGCTAGCTTAGGTTAA 57.260 39.130 29.39 8.85 45.61 2.01
623 624 5.245301 TGAACAGTGAAGCTAGCTTAGGTTA 59.755 40.000 29.39 12.52 45.61 2.85
625 626 3.578716 TGAACAGTGAAGCTAGCTTAGGT 59.421 43.478 29.39 20.26 36.26 3.08
626 627 4.193826 TGAACAGTGAAGCTAGCTTAGG 57.806 45.455 29.39 19.67 36.26 2.69
627 628 6.568869 ACTATGAACAGTGAAGCTAGCTTAG 58.431 40.000 29.39 19.82 36.26 2.18
628 629 6.152831 TGACTATGAACAGTGAAGCTAGCTTA 59.847 38.462 29.39 14.97 36.26 3.09
629 630 5.047021 TGACTATGAACAGTGAAGCTAGCTT 60.047 40.000 29.71 29.71 39.23 3.74
630 631 4.464244 TGACTATGAACAGTGAAGCTAGCT 59.536 41.667 12.68 12.68 0.00 3.32
631 632 4.748892 TGACTATGAACAGTGAAGCTAGC 58.251 43.478 6.62 6.62 0.00 3.42
632 633 4.803088 GCTGACTATGAACAGTGAAGCTAG 59.197 45.833 0.00 0.00 34.34 3.42
633 634 4.675408 CGCTGACTATGAACAGTGAAGCTA 60.675 45.833 0.00 0.00 44.25 3.32
634 635 3.594134 GCTGACTATGAACAGTGAAGCT 58.406 45.455 0.00 0.00 34.34 3.74
635 636 2.346847 CGCTGACTATGAACAGTGAAGC 59.653 50.000 0.00 0.00 44.25 3.86
636 637 3.579709 ACGCTGACTATGAACAGTGAAG 58.420 45.455 13.29 0.00 44.25 3.02
637 638 3.660501 ACGCTGACTATGAACAGTGAA 57.339 42.857 13.29 0.00 44.25 3.18
638 639 3.660501 AACGCTGACTATGAACAGTGA 57.339 42.857 13.29 0.00 44.25 3.41
639 640 4.864806 ACATAACGCTGACTATGAACAGTG 59.135 41.667 0.00 0.00 46.06 3.66
640 641 5.073311 ACATAACGCTGACTATGAACAGT 57.927 39.130 0.00 0.00 36.62 3.55
641 642 6.408858 AAACATAACGCTGACTATGAACAG 57.591 37.500 0.00 0.00 37.22 3.16
642 643 6.795098 AAAACATAACGCTGACTATGAACA 57.205 33.333 0.00 0.00 31.28 3.18
643 644 9.769093 AAATAAAACATAACGCTGACTATGAAC 57.231 29.630 0.00 0.00 31.28 3.18
647 648 9.931210 GCTAAAATAAAACATAACGCTGACTAT 57.069 29.630 0.00 0.00 0.00 2.12
648 649 8.937884 TGCTAAAATAAAACATAACGCTGACTA 58.062 29.630 0.00 0.00 0.00 2.59
649 650 7.749126 GTGCTAAAATAAAACATAACGCTGACT 59.251 33.333 0.00 0.00 0.00 3.41
650 651 7.007995 GGTGCTAAAATAAAACATAACGCTGAC 59.992 37.037 0.00 0.00 0.00 3.51
651 652 7.024768 GGTGCTAAAATAAAACATAACGCTGA 58.975 34.615 0.00 0.00 0.00 4.26
652 653 6.021782 CGGTGCTAAAATAAAACATAACGCTG 60.022 38.462 0.00 0.00 0.00 5.18
653 654 6.025280 CGGTGCTAAAATAAAACATAACGCT 58.975 36.000 0.00 0.00 0.00 5.07
654 655 5.796437 ACGGTGCTAAAATAAAACATAACGC 59.204 36.000 0.00 0.00 0.00 4.84
655 656 7.784790 AACGGTGCTAAAATAAAACATAACG 57.215 32.000 0.00 0.00 0.00 3.18
656 657 8.360132 CGAAACGGTGCTAAAATAAAACATAAC 58.640 33.333 0.00 0.00 0.00 1.89
657 658 7.537991 CCGAAACGGTGCTAAAATAAAACATAA 59.462 33.333 1.80 0.00 42.73 1.90
658 659 7.022384 CCGAAACGGTGCTAAAATAAAACATA 58.978 34.615 1.80 0.00 42.73 2.29
659 660 5.859648 CCGAAACGGTGCTAAAATAAAACAT 59.140 36.000 1.80 0.00 42.73 2.71
660 661 5.213675 CCGAAACGGTGCTAAAATAAAACA 58.786 37.500 1.80 0.00 42.73 2.83
661 662 5.734443 CCGAAACGGTGCTAAAATAAAAC 57.266 39.130 1.80 0.00 42.73 2.43
675 676 6.856791 CTCAAACAAGAGATCTCCGAAACGG 61.857 48.000 19.30 3.66 42.35 4.44
676 677 3.987868 TCAAACAAGAGATCTCCGAAACG 59.012 43.478 19.30 4.90 0.00 3.60
677 678 4.143009 GCTCAAACAAGAGATCTCCGAAAC 60.143 45.833 19.30 0.00 37.87 2.78
678 679 3.997021 GCTCAAACAAGAGATCTCCGAAA 59.003 43.478 19.30 0.00 37.87 3.46
679 680 3.259374 AGCTCAAACAAGAGATCTCCGAA 59.741 43.478 19.30 0.00 37.87 4.30
680 681 2.828520 AGCTCAAACAAGAGATCTCCGA 59.171 45.455 19.30 5.87 37.87 4.55
681 682 3.186119 GAGCTCAAACAAGAGATCTCCG 58.814 50.000 19.30 13.11 45.17 4.63
686 687 2.300152 TCACGGAGCTCAAACAAGAGAT 59.700 45.455 17.19 0.00 37.87 2.75
687 688 1.686587 TCACGGAGCTCAAACAAGAGA 59.313 47.619 17.19 0.89 37.87 3.10
688 689 2.154854 TCACGGAGCTCAAACAAGAG 57.845 50.000 17.19 0.00 38.68 2.85
689 690 2.839486 ATCACGGAGCTCAAACAAGA 57.161 45.000 17.19 4.61 0.00 3.02
690 691 3.181516 GCTAATCACGGAGCTCAAACAAG 60.182 47.826 17.19 4.85 35.73 3.16
691 692 2.742053 GCTAATCACGGAGCTCAAACAA 59.258 45.455 17.19 0.00 35.73 2.83
692 693 2.028112 AGCTAATCACGGAGCTCAAACA 60.028 45.455 17.19 0.00 46.08 2.83
693 694 2.622436 AGCTAATCACGGAGCTCAAAC 58.378 47.619 17.19 0.00 46.08 2.93
705 706 7.603404 CCCAAAATGAAAATTGTGAGCTAATCA 59.397 33.333 0.00 0.00 34.79 2.57
706 707 7.064966 CCCCAAAATGAAAATTGTGAGCTAATC 59.935 37.037 0.00 0.00 0.00 1.75
707 708 6.880529 CCCCAAAATGAAAATTGTGAGCTAAT 59.119 34.615 0.00 0.00 0.00 1.73
708 709 6.042552 TCCCCAAAATGAAAATTGTGAGCTAA 59.957 34.615 0.00 0.00 0.00 3.09
709 710 5.541868 TCCCCAAAATGAAAATTGTGAGCTA 59.458 36.000 0.00 0.00 0.00 3.32
710 711 4.347583 TCCCCAAAATGAAAATTGTGAGCT 59.652 37.500 0.00 0.00 0.00 4.09
711 712 4.640364 TCCCCAAAATGAAAATTGTGAGC 58.360 39.130 0.00 0.00 0.00 4.26
712 713 7.614494 ACTATCCCCAAAATGAAAATTGTGAG 58.386 34.615 0.00 0.00 0.00 3.51
713 714 7.552050 ACTATCCCCAAAATGAAAATTGTGA 57.448 32.000 0.00 0.00 0.00 3.58
714 715 8.620116 AAACTATCCCCAAAATGAAAATTGTG 57.380 30.769 0.00 0.00 0.00 3.33
715 716 9.065798 CAAAACTATCCCCAAAATGAAAATTGT 57.934 29.630 0.00 0.00 0.00 2.71
716 717 8.513774 CCAAAACTATCCCCAAAATGAAAATTG 58.486 33.333 0.00 0.00 0.00 2.32
732 733 7.684428 GCATTCTAATCCAACCCCAAAACTATC 60.684 40.741 0.00 0.00 0.00 2.08
779 780 5.249780 TGCTCCAAAAATACTTCTGGGTA 57.750 39.130 0.00 0.00 0.00 3.69
787 788 3.259123 CCAAAGCCTGCTCCAAAAATACT 59.741 43.478 0.00 0.00 0.00 2.12
790 791 1.348696 CCCAAAGCCTGCTCCAAAAAT 59.651 47.619 0.00 0.00 0.00 1.82
828 829 1.337447 TGCTCGCCACCACTAACTAAC 60.337 52.381 0.00 0.00 0.00 2.34
831 832 1.004918 GTGCTCGCCACCACTAACT 60.005 57.895 0.00 0.00 38.55 2.24
836 837 4.664677 AGTCGTGCTCGCCACCAC 62.665 66.667 2.69 0.00 41.53 4.16
837 838 4.662961 CAGTCGTGCTCGCCACCA 62.663 66.667 2.69 0.00 41.53 4.17
896 898 0.242286 CCATCGGCTGATCTAGTCCG 59.758 60.000 4.63 15.10 43.14 4.79
958 963 2.683933 GGAGGGGAGAGTGCGGAA 60.684 66.667 0.00 0.00 0.00 4.30
1612 1669 1.001633 GTCGTGCTTGGGGTTAGAGAA 59.998 52.381 0.00 0.00 0.00 2.87
1634 1691 0.322975 GAGCAGGTCCTTGAGCTTGA 59.677 55.000 3.82 0.00 38.40 3.02
1683 1740 3.862124 CGCGAGGTCCTGACAAAG 58.138 61.111 0.00 0.00 0.00 2.77
1760 1820 6.614694 TTACACAGCTAGGACCTGAATTAA 57.385 37.500 3.53 0.00 34.47 1.40
1761 1821 6.408092 CCATTACACAGCTAGGACCTGAATTA 60.408 42.308 3.53 0.00 34.47 1.40
1860 1920 2.168521 GAGGAATGACCGGACAATCTCA 59.831 50.000 19.08 7.25 44.74 3.27
1866 1926 0.611062 ACTCGAGGAATGACCGGACA 60.611 55.000 18.41 9.50 44.74 4.02
1905 1965 2.970974 GCTCTTTCGTGCACCAGCC 61.971 63.158 12.15 0.00 41.13 4.85
1950 2010 1.072505 GGCGACAAGACCCCTTTCA 59.927 57.895 0.00 0.00 0.00 2.69
1971 2031 0.037232 ACTTGGCGCTCAGGTACTTC 60.037 55.000 7.64 0.00 34.60 3.01
2058 2118 4.021925 GGCTATGCCTAGGCCGGG 62.022 72.222 30.81 19.76 46.69 5.73
2220 2281 5.923684 ACAAACAACAAACCAACAACTACAG 59.076 36.000 0.00 0.00 0.00 2.74
2413 2474 5.683876 AATAGCTTATCCACACACAGAGT 57.316 39.130 0.00 0.00 0.00 3.24
2474 2535 2.618794 TCATGGCAAAAAGGGAATGGT 58.381 42.857 0.00 0.00 0.00 3.55
2497 2558 9.893634 TGATCAATTCATATTTGCTTTTCCAAT 57.106 25.926 0.00 0.00 0.00 3.16
2498 2559 9.373603 CTGATCAATTCATATTTGCTTTTCCAA 57.626 29.630 0.00 0.00 32.72 3.53
2773 3362 2.053865 CCATCGCCAATTGCCCAGT 61.054 57.895 0.00 0.00 36.24 4.00
2780 3369 2.709883 CCCAACGCCATCGCCAATT 61.710 57.895 0.00 0.00 39.84 2.32
2882 3471 0.548031 CTAATGAGAGGGCCTGGCAA 59.452 55.000 22.05 0.00 0.00 4.52
2954 3543 4.402793 TCTCTCTTAACAGACCATACCAGC 59.597 45.833 0.00 0.00 0.00 4.85
2955 3544 5.897050 GTCTCTCTTAACAGACCATACCAG 58.103 45.833 0.00 0.00 34.09 4.00
2956 3545 5.916661 GTCTCTCTTAACAGACCATACCA 57.083 43.478 0.00 0.00 34.09 3.25
2963 3552 4.767928 TCCTTCAGGTCTCTCTTAACAGAC 59.232 45.833 0.00 0.00 38.71 3.51
2964 3553 4.999310 TCCTTCAGGTCTCTCTTAACAGA 58.001 43.478 0.00 0.00 36.34 3.41
2965 3554 5.930837 ATCCTTCAGGTCTCTCTTAACAG 57.069 43.478 0.00 0.00 36.34 3.16
2966 3555 5.046304 CCAATCCTTCAGGTCTCTCTTAACA 60.046 44.000 0.00 0.00 36.34 2.41
2967 3556 5.423886 CCAATCCTTCAGGTCTCTCTTAAC 58.576 45.833 0.00 0.00 36.34 2.01
2968 3557 4.471386 CCCAATCCTTCAGGTCTCTCTTAA 59.529 45.833 0.00 0.00 36.34 1.85
2969 3558 4.033709 CCCAATCCTTCAGGTCTCTCTTA 58.966 47.826 0.00 0.00 36.34 2.10
2970 3559 2.843113 CCCAATCCTTCAGGTCTCTCTT 59.157 50.000 0.00 0.00 36.34 2.85
2971 3560 2.476199 CCCAATCCTTCAGGTCTCTCT 58.524 52.381 0.00 0.00 36.34 3.10
2972 3561 1.488393 CCCCAATCCTTCAGGTCTCTC 59.512 57.143 0.00 0.00 36.34 3.20
2973 3562 1.203492 ACCCCAATCCTTCAGGTCTCT 60.203 52.381 0.00 0.00 36.34 3.10
2974 3563 1.290134 ACCCCAATCCTTCAGGTCTC 58.710 55.000 0.00 0.00 36.34 3.36
2975 3564 2.661176 TACCCCAATCCTTCAGGTCT 57.339 50.000 0.00 0.00 36.34 3.85
2976 3565 2.777692 TGATACCCCAATCCTTCAGGTC 59.222 50.000 0.00 0.00 36.34 3.85
2977 3566 2.509964 GTGATACCCCAATCCTTCAGGT 59.490 50.000 0.00 0.00 36.34 4.00
2978 3567 2.158608 GGTGATACCCCAATCCTTCAGG 60.159 54.545 0.00 0.00 30.04 3.86
2979 3568 2.485479 CGGTGATACCCCAATCCTTCAG 60.485 54.545 0.00 0.00 33.75 3.02
2980 3569 1.488812 CGGTGATACCCCAATCCTTCA 59.511 52.381 0.00 0.00 33.75 3.02
2981 3570 1.766496 TCGGTGATACCCCAATCCTTC 59.234 52.381 0.00 0.00 33.75 3.46
2982 3571 1.887797 TCGGTGATACCCCAATCCTT 58.112 50.000 0.00 0.00 33.75 3.36
2983 3572 1.768870 CTTCGGTGATACCCCAATCCT 59.231 52.381 0.00 0.00 33.75 3.24
2984 3573 1.766496 TCTTCGGTGATACCCCAATCC 59.234 52.381 0.00 0.00 33.75 3.01
2985 3574 2.807108 GCTCTTCGGTGATACCCCAATC 60.807 54.545 0.00 0.00 33.75 2.67
2986 3575 1.141053 GCTCTTCGGTGATACCCCAAT 59.859 52.381 0.00 0.00 33.75 3.16
2987 3576 0.539986 GCTCTTCGGTGATACCCCAA 59.460 55.000 0.00 0.00 33.75 4.12
2988 3577 0.325296 AGCTCTTCGGTGATACCCCA 60.325 55.000 0.00 0.00 33.75 4.96
2989 3578 1.614413 CTAGCTCTTCGGTGATACCCC 59.386 57.143 0.00 0.00 33.75 4.95
2990 3579 1.000052 GCTAGCTCTTCGGTGATACCC 60.000 57.143 7.70 0.00 33.75 3.69
2991 3580 1.957877 AGCTAGCTCTTCGGTGATACC 59.042 52.381 12.68 0.00 34.05 2.73
2992 3581 4.380023 CCATAGCTAGCTCTTCGGTGATAC 60.380 50.000 23.26 0.00 0.00 2.24
2993 3582 3.759086 CCATAGCTAGCTCTTCGGTGATA 59.241 47.826 23.26 0.00 0.00 2.15
2994 3583 2.560542 CCATAGCTAGCTCTTCGGTGAT 59.439 50.000 23.26 3.19 0.00 3.06
2995 3584 1.957177 CCATAGCTAGCTCTTCGGTGA 59.043 52.381 23.26 0.28 0.00 4.02
2996 3585 1.957177 TCCATAGCTAGCTCTTCGGTG 59.043 52.381 23.26 11.17 0.00 4.94
2997 3586 1.957877 GTCCATAGCTAGCTCTTCGGT 59.042 52.381 23.26 0.00 0.00 4.69
2998 3587 1.957177 TGTCCATAGCTAGCTCTTCGG 59.043 52.381 23.26 16.90 0.00 4.30
2999 3588 2.030363 CCTGTCCATAGCTAGCTCTTCG 60.030 54.545 23.26 8.05 0.00 3.79
3000 3589 2.298729 CCCTGTCCATAGCTAGCTCTTC 59.701 54.545 23.26 9.20 0.00 2.87
3001 3590 2.324541 CCCTGTCCATAGCTAGCTCTT 58.675 52.381 23.26 7.47 0.00 2.85
3002 3591 1.482177 CCCCTGTCCATAGCTAGCTCT 60.482 57.143 23.26 9.05 0.00 4.09
3003 3592 0.972883 CCCCTGTCCATAGCTAGCTC 59.027 60.000 23.26 7.00 0.00 4.09
3004 3593 0.266152 ACCCCTGTCCATAGCTAGCT 59.734 55.000 23.12 23.12 0.00 3.32
3005 3594 0.394565 CACCCCTGTCCATAGCTAGC 59.605 60.000 6.62 6.62 0.00 3.42
3006 3595 0.394565 GCACCCCTGTCCATAGCTAG 59.605 60.000 0.00 0.00 0.00 3.42
3007 3596 0.326143 TGCACCCCTGTCCATAGCTA 60.326 55.000 0.00 0.00 0.00 3.32
3008 3597 0.990282 ATGCACCCCTGTCCATAGCT 60.990 55.000 0.00 0.00 0.00 3.32
3009 3598 0.820891 CATGCACCCCTGTCCATAGC 60.821 60.000 0.00 0.00 0.00 2.97
3010 3599 0.179009 CCATGCACCCCTGTCCATAG 60.179 60.000 0.00 0.00 0.00 2.23
3011 3600 0.623031 TCCATGCACCCCTGTCCATA 60.623 55.000 0.00 0.00 0.00 2.74
3012 3601 1.508667 TTCCATGCACCCCTGTCCAT 61.509 55.000 0.00 0.00 0.00 3.41
3013 3602 2.141011 CTTCCATGCACCCCTGTCCA 62.141 60.000 0.00 0.00 0.00 4.02
3014 3603 1.379044 CTTCCATGCACCCCTGTCC 60.379 63.158 0.00 0.00 0.00 4.02
3015 3604 2.048603 GCTTCCATGCACCCCTGTC 61.049 63.158 0.00 0.00 0.00 3.51
3016 3605 2.036256 GCTTCCATGCACCCCTGT 59.964 61.111 0.00 0.00 0.00 4.00
3017 3606 1.304713 AAGCTTCCATGCACCCCTG 60.305 57.895 0.00 0.00 34.99 4.45
3018 3607 1.304713 CAAGCTTCCATGCACCCCT 60.305 57.895 0.00 0.00 34.99 4.79
3019 3608 3.010413 GCAAGCTTCCATGCACCCC 62.010 63.158 0.00 0.00 42.12 4.95
3020 3609 0.680921 TAGCAAGCTTCCATGCACCC 60.681 55.000 10.57 0.00 44.95 4.61
3021 3610 1.336125 GATAGCAAGCTTCCATGCACC 59.664 52.381 10.57 0.00 44.95 5.01
3022 3611 1.336125 GGATAGCAAGCTTCCATGCAC 59.664 52.381 10.57 2.11 44.95 4.57
3023 3612 1.064537 TGGATAGCAAGCTTCCATGCA 60.065 47.619 16.61 6.28 44.95 3.96
3024 3613 1.683943 TGGATAGCAAGCTTCCATGC 58.316 50.000 16.61 0.00 42.87 4.06
3027 3616 2.646930 CACATGGATAGCAAGCTTCCA 58.353 47.619 20.33 20.33 43.37 3.53
3028 3617 1.336125 GCACATGGATAGCAAGCTTCC 59.664 52.381 0.00 7.95 0.00 3.46
3029 3618 1.336125 GGCACATGGATAGCAAGCTTC 59.664 52.381 0.00 0.00 0.00 3.86
3030 3619 1.341285 TGGCACATGGATAGCAAGCTT 60.341 47.619 0.00 0.00 0.00 3.74
3031 3620 0.256752 TGGCACATGGATAGCAAGCT 59.743 50.000 0.00 0.00 0.00 3.74
3032 3621 0.666913 CTGGCACATGGATAGCAAGC 59.333 55.000 0.00 0.00 38.20 4.01
3033 3622 2.219458 CTCTGGCACATGGATAGCAAG 58.781 52.381 0.00 0.00 38.20 4.01
3034 3623 1.748244 GCTCTGGCACATGGATAGCAA 60.748 52.381 0.00 0.00 38.20 3.91
3035 3624 0.179037 GCTCTGGCACATGGATAGCA 60.179 55.000 0.00 0.00 38.20 3.49
3036 3625 0.888285 GGCTCTGGCACATGGATAGC 60.888 60.000 0.00 0.00 38.20 2.97
3037 3626 0.471191 TGGCTCTGGCACATGGATAG 59.529 55.000 0.00 0.00 38.20 2.08
3038 3627 1.142936 ATGGCTCTGGCACATGGATA 58.857 50.000 0.00 0.00 41.84 2.59
3039 3628 0.467474 CATGGCTCTGGCACATGGAT 60.467 55.000 7.68 0.00 41.84 3.41
3040 3629 1.077285 CATGGCTCTGGCACATGGA 60.077 57.895 7.68 0.00 41.84 3.41
3041 3630 1.077285 TCATGGCTCTGGCACATGG 60.077 57.895 13.76 0.00 41.84 3.66
3042 3631 0.393944 ACTCATGGCTCTGGCACATG 60.394 55.000 8.97 8.97 41.84 3.21
3043 3632 0.330604 AACTCATGGCTCTGGCACAT 59.669 50.000 0.00 0.00 41.84 3.21
3044 3633 0.607217 CAACTCATGGCTCTGGCACA 60.607 55.000 0.00 0.00 41.84 4.57
3045 3634 1.310933 CCAACTCATGGCTCTGGCAC 61.311 60.000 0.00 0.00 43.80 5.01
3046 3635 1.001764 CCAACTCATGGCTCTGGCA 60.002 57.895 0.00 0.00 43.80 4.92
3047 3636 3.915575 CCAACTCATGGCTCTGGC 58.084 61.111 0.00 0.00 43.80 4.85


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.