Multiple sequence alignment - TraesCS5B01G339600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G339600 chr5B 100.000 6228 0 0 1 6228 523905240 523899013 0.000000e+00 11502.0
1 TraesCS5B01G339600 chr5B 90.253 513 46 4 1 510 61658763 61659274 0.000000e+00 667.0
2 TraesCS5B01G339600 chr5B 95.161 310 13 2 5921 6228 466218528 466218219 7.260000e-134 488.0
3 TraesCS5B01G339600 chr5B 95.146 309 14 1 5921 6228 567055436 567055128 2.610000e-133 486.0
4 TraesCS5B01G339600 chr5B 95.130 308 13 2 5923 6228 139685135 139684828 9.390000e-133 484.0
5 TraesCS5B01G339600 chr5B 94.805 308 14 2 5923 6228 139709323 139709016 4.370000e-131 479.0
6 TraesCS5B01G339600 chr5B 76.000 250 49 9 625 868 59919711 59919467 1.100000e-22 119.0
7 TraesCS5B01G339600 chr7A 95.175 2570 111 9 3187 5753 54862815 54860256 0.000000e+00 4047.0
8 TraesCS5B01G339600 chr7A 91.717 1968 147 12 3792 5753 116057052 116055095 0.000000e+00 2717.0
9 TraesCS5B01G339600 chr7A 93.490 1782 81 13 620 2369 54865662 54863884 0.000000e+00 2615.0
10 TraesCS5B01G339600 chr7A 91.364 1899 147 13 3792 5684 160992808 160990921 0.000000e+00 2582.0
11 TraesCS5B01G339600 chr7A 97.701 783 16 1 2408 3188 54863886 54863104 0.000000e+00 1345.0
12 TraesCS5B01G339600 chr7A 97.059 34 1 0 3050 3083 463395752 463395719 2.420000e-04 58.4
13 TraesCS5B01G339600 chr6A 94.682 2595 102 13 629 3188 577054157 577051564 0.000000e+00 3995.0
14 TraesCS5B01G339600 chr6A 94.747 2570 117 11 3187 5753 577051275 577048721 0.000000e+00 3982.0
15 TraesCS5B01G339600 chr6A 93.923 2600 116 16 623 3188 46441945 46444536 0.000000e+00 3888.0
16 TraesCS5B01G339600 chr6A 94.254 1984 103 8 3187 5168 46444825 46446799 0.000000e+00 3022.0
17 TraesCS5B01G339600 chr6A 75.000 232 48 8 626 852 137940216 137939990 1.430000e-16 99.0
18 TraesCS5B01G339600 chr5A 91.722 1969 144 13 3792 5754 638639001 638640956 0.000000e+00 2715.0
19 TraesCS5B01G339600 chr2A 90.803 1968 165 11 3792 5753 533180349 533178392 0.000000e+00 2617.0
20 TraesCS5B01G339600 chr1B 91.798 1207 78 12 3881 5085 18657455 18656268 0.000000e+00 1661.0
21 TraesCS5B01G339600 chr1B 87.640 534 52 10 1 522 547404731 547405262 5.340000e-170 608.0
22 TraesCS5B01G339600 chr1B 85.227 528 47 15 1 519 485307082 485307587 1.200000e-141 514.0
23 TraesCS5B01G339600 chr1B 95.114 307 13 2 5924 6228 509557063 509556757 3.380000e-132 483.0
24 TraesCS5B01G339600 chr1B 87.850 107 13 0 625 731 12124820 12124714 6.550000e-25 126.0
25 TraesCS5B01G339600 chrUn 93.806 1001 51 7 3187 4182 11850465 11851459 0.000000e+00 1495.0
26 TraesCS5B01G339600 chrUn 93.718 780 43 5 3405 4182 318611801 318612576 0.000000e+00 1164.0
27 TraesCS5B01G339600 chrUn 90.564 869 76 5 4892 5755 318613204 318614071 0.000000e+00 1146.0
28 TraesCS5B01G339600 chrUn 90.564 869 76 5 4892 5755 385585134 385586001 0.000000e+00 1146.0
29 TraesCS5B01G339600 chrUn 90.449 869 77 5 4892 5755 11852087 11852954 0.000000e+00 1140.0
30 TraesCS5B01G339600 chrUn 91.759 449 36 1 4449 4897 11851485 11851932 1.910000e-174 623.0
31 TraesCS5B01G339600 chrUn 85.353 553 45 20 1 520 36428238 36428787 1.980000e-149 540.0
32 TraesCS5B01G339600 chrUn 92.537 268 16 3 2924 3188 11849903 11850169 1.270000e-101 381.0
33 TraesCS5B01G339600 chrUn 92.537 268 16 3 2924 3188 380526357 380526091 1.270000e-101 381.0
34 TraesCS5B01G339600 chrUn 92.164 268 17 3 2924 3188 351755452 351755186 5.890000e-100 375.0
35 TraesCS5B01G339600 chr3D 90.395 531 37 12 1 519 495302720 495303248 0.000000e+00 686.0
36 TraesCS5B01G339600 chr3D 91.209 91 7 1 2567 2657 591969885 591969796 8.480000e-24 122.0
37 TraesCS5B01G339600 chr3D 83.051 118 19 1 2372 2489 591970137 591970021 8.540000e-19 106.0
38 TraesCS5B01G339600 chr3D 81.132 106 20 0 626 731 574567429 574567324 1.110000e-12 86.1
39 TraesCS5B01G339600 chr7D 88.972 535 47 8 1 524 148236556 148236023 0.000000e+00 651.0
40 TraesCS5B01G339600 chr7D 89.443 521 42 11 1 510 469643600 469644118 0.000000e+00 645.0
41 TraesCS5B01G339600 chr7D 84.759 374 45 11 4170 4534 142688031 142688401 1.280000e-96 364.0
42 TraesCS5B01G339600 chr3B 87.947 531 50 10 1 519 28799031 28798503 1.150000e-171 614.0
43 TraesCS5B01G339600 chr3B 95.098 306 13 2 5924 6228 807218167 807217863 1.210000e-131 481.0
44 TraesCS5B01G339600 chr3B 82.883 333 47 4 2219 2550 16263173 16263496 2.200000e-74 291.0
45 TraesCS5B01G339600 chr6D 80.611 851 112 26 1759 2569 160983510 160982673 5.340000e-170 608.0
46 TraesCS5B01G339600 chr6D 93.056 72 5 0 2682 2753 160982559 160982488 8.540000e-19 106.0
47 TraesCS5B01G339600 chr7B 78.294 1055 112 44 1759 2732 640274886 640275904 7.000000e-159 571.0
48 TraesCS5B01G339600 chr7B 84.840 376 43 10 4170 4534 107099346 107099718 3.550000e-97 366.0
49 TraesCS5B01G339600 chr7B 90.741 108 10 0 3075 3182 187194783 187194676 1.810000e-30 145.0
50 TraesCS5B01G339600 chr7B 83.969 131 12 3 3636 3764 743208677 743208554 3.940000e-22 117.0
51 TraesCS5B01G339600 chr3A 85.660 523 52 7 1 520 25765731 25765229 4.280000e-146 529.0
52 TraesCS5B01G339600 chr3A 85.066 529 48 16 1 520 79394638 79395144 1.550000e-140 510.0
53 TraesCS5B01G339600 chr3A 77.287 656 65 34 1854 2460 560398790 560399410 6.060000e-80 309.0
54 TraesCS5B01G339600 chr3A 86.735 98 10 2 2561 2657 722173255 722173350 8.540000e-19 106.0
55 TraesCS5B01G339600 chr3A 97.436 39 1 0 2436 2474 722173076 722173114 4.030000e-07 67.6
56 TraesCS5B01G339600 chr3A 96.875 32 0 1 3050 3081 462617580 462617550 1.100000e-02 52.8
57 TraesCS5B01G339600 chr5D 84.909 550 50 19 1 520 62512168 62511622 5.530000e-145 525.0
58 TraesCS5B01G339600 chr5D 89.655 116 7 2 3073 3183 116745392 116745507 6.510000e-30 143.0
59 TraesCS5B01G339600 chr2B 95.765 307 11 2 5924 6228 76991805 76991499 1.560000e-135 494.0
60 TraesCS5B01G339600 chr2B 73.179 302 62 13 617 908 701606702 701606410 2.390000e-14 91.6
61 TraesCS5B01G339600 chr6B 95.440 307 12 2 5924 6228 67936307 67936001 7.260000e-134 488.0
62 TraesCS5B01G339600 chr6B 80.041 486 85 11 626 1104 116091382 116091862 3.570000e-92 350.0
63 TraesCS5B01G339600 chr6B 89.531 277 20 8 1 270 413933801 413933527 5.980000e-90 342.0
64 TraesCS5B01G339600 chr4A 95.114 307 12 3 5924 6228 702372569 702372264 1.210000e-131 481.0
65 TraesCS5B01G339600 chr2D 79.820 555 68 22 2041 2569 463076519 463075983 1.280000e-96 364.0
66 TraesCS5B01G339600 chr4B 90.741 108 10 0 3075 3182 357179124 357179017 1.810000e-30 145.0
67 TraesCS5B01G339600 chr4D 72.881 295 56 18 626 908 166149621 166149339 5.180000e-11 80.5
68 TraesCS5B01G339600 chr1A 96.875 32 0 1 3050 3081 578919236 578919206 1.100000e-02 52.8


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G339600 chr5B 523899013 523905240 6227 True 11502.00 11502 100.000000 1 6228 1 chr5B.!!$R5 6227
1 TraesCS5B01G339600 chr5B 61658763 61659274 511 False 667.00 667 90.253000 1 510 1 chr5B.!!$F1 509
2 TraesCS5B01G339600 chr7A 116055095 116057052 1957 True 2717.00 2717 91.717000 3792 5753 1 chr7A.!!$R1 1961
3 TraesCS5B01G339600 chr7A 54860256 54865662 5406 True 2669.00 4047 95.455333 620 5753 3 chr7A.!!$R4 5133
4 TraesCS5B01G339600 chr7A 160990921 160992808 1887 True 2582.00 2582 91.364000 3792 5684 1 chr7A.!!$R2 1892
5 TraesCS5B01G339600 chr6A 577048721 577054157 5436 True 3988.50 3995 94.714500 629 5753 2 chr6A.!!$R2 5124
6 TraesCS5B01G339600 chr6A 46441945 46446799 4854 False 3455.00 3888 94.088500 623 5168 2 chr6A.!!$F1 4545
7 TraesCS5B01G339600 chr5A 638639001 638640956 1955 False 2715.00 2715 91.722000 3792 5754 1 chr5A.!!$F1 1962
8 TraesCS5B01G339600 chr2A 533178392 533180349 1957 True 2617.00 2617 90.803000 3792 5753 1 chr2A.!!$R1 1961
9 TraesCS5B01G339600 chr1B 18656268 18657455 1187 True 1661.00 1661 91.798000 3881 5085 1 chr1B.!!$R2 1204
10 TraesCS5B01G339600 chr1B 547404731 547405262 531 False 608.00 608 87.640000 1 522 1 chr1B.!!$F2 521
11 TraesCS5B01G339600 chr1B 485307082 485307587 505 False 514.00 514 85.227000 1 519 1 chr1B.!!$F1 518
12 TraesCS5B01G339600 chrUn 318611801 318614071 2270 False 1155.00 1164 92.141000 3405 5755 2 chrUn.!!$F4 2350
13 TraesCS5B01G339600 chrUn 385585134 385586001 867 False 1146.00 1146 90.564000 4892 5755 1 chrUn.!!$F2 863
14 TraesCS5B01G339600 chrUn 11849903 11852954 3051 False 909.75 1495 92.137750 2924 5755 4 chrUn.!!$F3 2831
15 TraesCS5B01G339600 chrUn 36428238 36428787 549 False 540.00 540 85.353000 1 520 1 chrUn.!!$F1 519
16 TraesCS5B01G339600 chr3D 495302720 495303248 528 False 686.00 686 90.395000 1 519 1 chr3D.!!$F1 518
17 TraesCS5B01G339600 chr7D 148236023 148236556 533 True 651.00 651 88.972000 1 524 1 chr7D.!!$R1 523
18 TraesCS5B01G339600 chr7D 469643600 469644118 518 False 645.00 645 89.443000 1 510 1 chr7D.!!$F2 509
19 TraesCS5B01G339600 chr3B 28798503 28799031 528 True 614.00 614 87.947000 1 519 1 chr3B.!!$R1 518
20 TraesCS5B01G339600 chr6D 160982488 160983510 1022 True 357.00 608 86.833500 1759 2753 2 chr6D.!!$R1 994
21 TraesCS5B01G339600 chr7B 640274886 640275904 1018 False 571.00 571 78.294000 1759 2732 1 chr7B.!!$F2 973
22 TraesCS5B01G339600 chr3A 25765229 25765731 502 True 529.00 529 85.660000 1 520 1 chr3A.!!$R1 519
23 TraesCS5B01G339600 chr3A 79394638 79395144 506 False 510.00 510 85.066000 1 520 1 chr3A.!!$F1 519
24 TraesCS5B01G339600 chr3A 560398790 560399410 620 False 309.00 309 77.287000 1854 2460 1 chr3A.!!$F2 606
25 TraesCS5B01G339600 chr5D 62511622 62512168 546 True 525.00 525 84.909000 1 520 1 chr5D.!!$R1 519
26 TraesCS5B01G339600 chr2D 463075983 463076519 536 True 364.00 364 79.820000 2041 2569 1 chr2D.!!$R1 528

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
383 441 0.319555 TGTGAACAGCAGCCGTACTC 60.320 55.0 0.0 0.00 0.00 2.59 F
600 660 0.645868 GTGATACGAAGGTCGCTTGC 59.354 55.0 0.0 0.00 45.12 4.01 F
1465 1525 0.470833 AGGTATGCTCCGAGATGCCT 60.471 55.0 0.0 5.75 30.45 4.75 F
1748 1825 0.823356 ATTGTATGCCACGCCCCATC 60.823 55.0 0.0 0.00 0.00 3.51 F
3262 3753 0.543174 AGCTCGTCCCTGGAAAGACT 60.543 55.0 0.0 0.00 0.00 3.24 F
3777 4276 0.904649 CAGTGACCAGGTGCCTATCA 59.095 55.0 0.0 0.00 0.00 2.15 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1383 1443 0.178990 AGAAGAAAAGGGCAGCCGTT 60.179 50.000 13.89 13.89 32.63 4.44 R
1687 1764 0.260230 TGGGGCCACAGTTTTCTTCA 59.740 50.000 1.54 0.00 0.00 3.02 R
3079 3273 0.038744 AAGTACTTCCGGACGGAGGA 59.961 55.000 26.43 9.94 46.06 3.71 R
3403 3897 1.338579 GGCCAGAGTTCTCACAAGAGG 60.339 57.143 0.00 0.00 42.34 3.69 R
4855 5366 1.206132 TCCGCACGATAACTGGACAAT 59.794 47.619 0.00 0.00 0.00 2.71 R
5719 6397 0.105760 ACTGCATCCCCAACAACCAA 60.106 50.000 0.00 0.00 0.00 3.67 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
72 74 9.002600 AGAAAAACAAATATGGAAGCAAAATCC 57.997 29.630 0.00 0.00 37.48 3.01
165 172 2.183555 GTAGTAGCGCCGGTGCTT 59.816 61.111 44.16 30.61 44.46 3.91
286 341 1.599518 CCGTGCAGCAACCCTACAA 60.600 57.895 0.00 0.00 0.00 2.41
307 362 2.030805 ACAATGGCGTCTGAGAAAAAGC 60.031 45.455 0.00 0.00 0.00 3.51
368 426 1.347707 GGAAGGAGATGTGGTGTGTGA 59.652 52.381 0.00 0.00 0.00 3.58
383 441 0.319555 TGTGAACAGCAGCCGTACTC 60.320 55.000 0.00 0.00 0.00 2.59
388 446 0.666577 ACAGCAGCCGTACTCGAAAC 60.667 55.000 0.00 0.00 39.71 2.78
399 458 5.719627 GCCGTACTCGAAACGATAAGAAAAC 60.720 44.000 18.57 0.00 42.90 2.43
400 459 5.458321 CGTACTCGAAACGATAAGAAAACG 58.542 41.667 13.19 0.00 42.90 3.60
452 511 1.626356 ATCCCTCCTGCTTTAGCGCA 61.626 55.000 11.47 0.00 45.83 6.09
477 537 1.681327 GGGGTGAGCTAGTCGACCA 60.681 63.158 13.01 0.00 31.42 4.02
478 538 1.255667 GGGGTGAGCTAGTCGACCAA 61.256 60.000 13.01 0.00 31.42 3.67
482 542 1.516603 GAGCTAGTCGACCAACCGC 60.517 63.158 13.01 7.91 0.00 5.68
523 583 6.376299 CCCGGCTCTAAAAGTTTACCTTTATT 59.624 38.462 0.00 0.00 42.62 1.40
526 586 9.687210 CGGCTCTAAAAGTTTACCTTTATTTTT 57.313 29.630 0.00 0.00 42.62 1.94
570 630 5.593679 ACTACTCGTAGTTGCCATGTAAT 57.406 39.130 3.97 0.00 43.35 1.89
571 631 5.348986 ACTACTCGTAGTTGCCATGTAATG 58.651 41.667 3.97 0.00 43.35 1.90
572 632 2.936498 ACTCGTAGTTGCCATGTAATGC 59.064 45.455 0.00 0.00 44.97 3.56
573 633 2.285083 TCGTAGTTGCCATGTAATGCC 58.715 47.619 0.00 0.00 44.97 4.40
574 634 2.013400 CGTAGTTGCCATGTAATGCCA 58.987 47.619 0.00 0.00 44.97 4.92
575 635 2.618241 CGTAGTTGCCATGTAATGCCAT 59.382 45.455 0.00 0.00 44.97 4.40
576 636 3.548616 CGTAGTTGCCATGTAATGCCATG 60.549 47.826 0.00 0.00 44.97 3.66
577 637 2.737544 AGTTGCCATGTAATGCCATGA 58.262 42.857 0.00 0.00 44.97 3.07
578 638 3.098377 AGTTGCCATGTAATGCCATGAA 58.902 40.909 0.00 0.00 44.97 2.57
579 639 3.514706 AGTTGCCATGTAATGCCATGAAA 59.485 39.130 0.00 0.00 44.97 2.69
580 640 4.020396 AGTTGCCATGTAATGCCATGAAAA 60.020 37.500 0.00 0.00 44.97 2.29
581 641 4.126208 TGCCATGTAATGCCATGAAAAG 57.874 40.909 0.00 0.00 44.97 2.27
582 642 3.514706 TGCCATGTAATGCCATGAAAAGT 59.485 39.130 0.00 0.00 44.97 2.66
583 643 3.866910 GCCATGTAATGCCATGAAAAGTG 59.133 43.478 0.00 0.00 44.97 3.16
584 644 4.381825 GCCATGTAATGCCATGAAAAGTGA 60.382 41.667 0.00 0.00 44.97 3.41
585 645 5.682990 GCCATGTAATGCCATGAAAAGTGAT 60.683 40.000 0.00 0.00 44.97 3.06
586 646 6.461370 GCCATGTAATGCCATGAAAAGTGATA 60.461 38.462 0.00 0.00 44.97 2.15
587 647 6.919662 CCATGTAATGCCATGAAAAGTGATAC 59.080 38.462 0.00 0.00 44.97 2.24
588 648 6.117911 TGTAATGCCATGAAAAGTGATACG 57.882 37.500 0.00 0.00 0.00 3.06
589 649 5.877564 TGTAATGCCATGAAAAGTGATACGA 59.122 36.000 0.00 0.00 0.00 3.43
590 650 5.895636 AATGCCATGAAAAGTGATACGAA 57.104 34.783 0.00 0.00 0.00 3.85
591 651 4.944962 TGCCATGAAAAGTGATACGAAG 57.055 40.909 0.00 0.00 0.00 3.79
592 652 3.689161 TGCCATGAAAAGTGATACGAAGG 59.311 43.478 0.00 0.00 0.00 3.46
593 653 3.689649 GCCATGAAAAGTGATACGAAGGT 59.310 43.478 0.00 0.00 0.00 3.50
594 654 4.201822 GCCATGAAAAGTGATACGAAGGTC 60.202 45.833 0.00 0.00 0.00 3.85
595 655 4.032900 CCATGAAAAGTGATACGAAGGTCG 59.967 45.833 0.00 0.00 46.93 4.79
596 656 2.991190 TGAAAAGTGATACGAAGGTCGC 59.009 45.455 0.00 0.00 45.12 5.19
597 657 3.251571 GAAAAGTGATACGAAGGTCGCT 58.748 45.455 0.00 0.00 45.12 4.93
598 658 3.314541 AAAGTGATACGAAGGTCGCTT 57.685 42.857 0.00 0.00 45.12 4.68
599 659 2.279582 AGTGATACGAAGGTCGCTTG 57.720 50.000 0.00 0.00 45.12 4.01
600 660 0.645868 GTGATACGAAGGTCGCTTGC 59.354 55.000 0.00 0.00 45.12 4.01
601 661 0.800683 TGATACGAAGGTCGCTTGCG 60.801 55.000 8.87 8.87 45.12 4.85
602 662 1.480219 GATACGAAGGTCGCTTGCGG 61.480 60.000 15.10 0.39 45.12 5.69
603 663 2.221906 ATACGAAGGTCGCTTGCGGT 62.222 55.000 15.10 6.39 45.12 5.68
604 664 3.777925 CGAAGGTCGCTTGCGGTG 61.778 66.667 15.10 0.00 31.14 4.94
605 665 4.090057 GAAGGTCGCTTGCGGTGC 62.090 66.667 15.10 5.98 0.00 5.01
606 666 4.927782 AAGGTCGCTTGCGGTGCA 62.928 61.111 15.10 0.00 36.47 4.57
607 667 4.927782 AGGTCGCTTGCGGTGCAA 62.928 61.111 15.10 3.97 46.80 4.08
690 750 7.993183 GGGAAAAATCTCTAATACCATCAGACA 59.007 37.037 0.00 0.00 0.00 3.41
788 848 7.889589 TGCTCATATATTTAATGTCAGGTCG 57.110 36.000 0.00 0.00 0.00 4.79
815 875 2.102588 CGGGAATACGAGGACTTCCATT 59.897 50.000 0.00 0.00 40.20 3.16
1105 1165 1.840650 CCCTCCGCATCTCCCTCAT 60.841 63.158 0.00 0.00 0.00 2.90
1211 1271 2.288778 CCTGCAGAGGCTCTCACCA 61.289 63.158 17.39 11.07 41.91 4.17
1297 1357 4.828925 GCCGCCAGGTGCTCTCTC 62.829 72.222 0.00 0.00 40.50 3.20
1345 1405 1.134491 GCTCACCACACCACCCTATAC 60.134 57.143 0.00 0.00 0.00 1.47
1432 1492 1.302033 CAGCCATCGCCCCTATGTC 60.302 63.158 0.00 0.00 34.57 3.06
1433 1493 1.766059 AGCCATCGCCCCTATGTCA 60.766 57.895 0.00 0.00 34.57 3.58
1465 1525 0.470833 AGGTATGCTCCGAGATGCCT 60.471 55.000 0.00 5.75 30.45 4.75
1573 1649 1.902508 TCTCCAGAAATCGACCTGCTT 59.097 47.619 0.00 0.00 0.00 3.91
1589 1665 1.278985 TGCTTGATGGACTGGTCGAAT 59.721 47.619 0.00 0.00 0.00 3.34
1593 1669 4.394920 GCTTGATGGACTGGTCGAATAAAA 59.605 41.667 0.00 0.00 0.00 1.52
1603 1680 8.674607 GGACTGGTCGAATAAAATTTCAGTATT 58.325 33.333 5.25 0.37 34.83 1.89
1635 1712 0.961019 TTCCTTTCACATGTGCAGGC 59.039 50.000 27.45 0.00 33.34 4.85
1636 1713 0.895100 TCCTTTCACATGTGCAGGCC 60.895 55.000 27.45 0.00 33.34 5.19
1670 1747 6.374333 GTGTGGATTTGGAAGCTATTTCTACA 59.626 38.462 0.00 0.00 36.03 2.74
1730 1807 3.506455 GCCTTGCTATCATGATGCTTGAT 59.494 43.478 18.72 0.00 37.56 2.57
1735 1812 7.094334 CCTTGCTATCATGATGCTTGATTGTAT 60.094 37.037 18.72 0.00 35.50 2.29
1737 1814 6.028368 GCTATCATGATGCTTGATTGTATGC 58.972 40.000 18.72 0.00 35.50 3.14
1748 1825 0.823356 ATTGTATGCCACGCCCCATC 60.823 55.000 0.00 0.00 0.00 3.51
1837 1914 5.163612 GGATCCATTGGCTCTAAAAACTGTC 60.164 44.000 6.95 0.00 0.00 3.51
2021 2099 1.512735 GATAGTTCCCCAAGAGCCCT 58.487 55.000 0.00 0.00 0.00 5.19
2032 2110 2.165030 CCAAGAGCCCTAATTGCAAGTG 59.835 50.000 10.14 0.00 0.00 3.16
2265 2392 1.956477 CCCTGCTTCCCGGATATTTTG 59.044 52.381 0.73 0.00 0.00 2.44
2643 2829 6.704819 CAAGCAAACAAACTGTTGGATTTAC 58.295 36.000 1.05 0.00 36.60 2.01
2864 3056 7.234988 AGGTTCTAGTTATTGTACACCTTCTGT 59.765 37.037 0.00 0.00 36.82 3.41
2909 3101 7.571080 AAAGCATGGATGACAAATTTTGTTT 57.429 28.000 15.54 7.20 45.52 2.83
3036 3228 3.515562 TGGTACTTTGGGAAAATGGCAT 58.484 40.909 0.00 0.00 0.00 4.40
3262 3753 0.543174 AGCTCGTCCCTGGAAAGACT 60.543 55.000 0.00 0.00 0.00 3.24
3275 3766 3.885297 TGGAAAGACTTTCAAGAAGCTGG 59.115 43.478 25.38 0.00 41.43 4.85
3403 3897 3.579709 CATCTACCGTGCCATAGACATC 58.420 50.000 0.00 0.00 30.34 3.06
3446 3941 4.936685 ACCTTTCATTTCTAGCCCTCTT 57.063 40.909 0.00 0.00 0.00 2.85
3547 4043 7.706179 TCAGTTTCAAAATTCTGTTGAACCATC 59.294 33.333 3.77 0.00 42.98 3.51
3644 4140 8.428063 CCATCACCAAGTAAGAAGAGAAGATAT 58.572 37.037 0.00 0.00 0.00 1.63
3777 4276 0.904649 CAGTGACCAGGTGCCTATCA 59.095 55.000 0.00 0.00 0.00 2.15
3778 4277 1.487976 CAGTGACCAGGTGCCTATCAT 59.512 52.381 0.00 0.00 0.00 2.45
3779 4278 1.765314 AGTGACCAGGTGCCTATCATC 59.235 52.381 0.00 3.47 0.00 2.92
3886 4386 3.877508 GCAGATTTGAACTAGGCCGTAAT 59.122 43.478 0.00 0.00 0.00 1.89
3958 4459 3.821033 GAGAAGCCCTTGAAGCAGTAAAA 59.179 43.478 0.00 0.00 0.00 1.52
3962 4463 4.151883 AGCCCTTGAAGCAGTAAAATTCA 58.848 39.130 0.00 0.00 0.00 2.57
3986 4487 3.848272 TGTGCAGCAGTTAATTAAGCC 57.152 42.857 0.00 0.00 0.00 4.35
3996 4497 7.380602 CAGCAGTTAATTAAGCCTCATTATTGC 59.619 37.037 0.00 0.00 31.92 3.56
4112 4616 9.224267 TGTTTTTCAGTGAATGATTTGGAAAAA 57.776 25.926 6.36 0.00 39.20 1.94
4134 4638 4.568072 TGTAGTAGCATGGTGGACAAAT 57.432 40.909 7.89 0.00 0.00 2.32
4139 4643 2.596346 AGCATGGTGGACAAATGTCAA 58.404 42.857 14.93 0.93 46.47 3.18
4298 4802 4.782019 TTTTGTGGTGTCTTATGATGGC 57.218 40.909 0.00 0.00 0.00 4.40
4335 4840 1.533338 CGTCCTCTGATTACGGAACCG 60.533 57.143 11.83 11.83 46.03 4.44
4427 4934 2.723209 GGTTTGTTGGTGAAGTAACGC 58.277 47.619 0.00 0.00 0.00 4.84
4543 5051 2.089059 TCCACCTATCCCCATGGGTAAT 60.089 50.000 29.33 22.69 41.92 1.89
4577 5085 1.826385 AATGCTTTCGCTGCTACCTT 58.174 45.000 0.00 0.00 36.97 3.50
4722 5231 6.127140 TGTTACTCCTTTCAAGTATCCTAGGC 60.127 42.308 2.96 0.00 0.00 3.93
4855 5366 5.012239 AGGCAGCTTCAAGAAAATATCACA 58.988 37.500 0.00 0.00 0.00 3.58
4911 5582 5.636543 GGGATTTTGACTTGCAGATTTTCAG 59.363 40.000 0.00 0.00 0.00 3.02
5160 5832 9.627123 CATTAGTTTATAGGAAACTTGGATGGA 57.373 33.333 7.90 0.00 43.67 3.41
5302 5977 5.766174 TGTTGGTAATTCAAAGTCCACCTAC 59.234 40.000 0.00 0.00 33.99 3.18
5303 5978 5.570205 TGGTAATTCAAAGTCCACCTACA 57.430 39.130 0.00 0.00 0.00 2.74
5324 5999 1.677217 GGAGGGCTATTCGATGATGGC 60.677 57.143 0.00 0.00 33.26 4.40
5447 6125 4.711799 CCCATGGCATCCCAACAT 57.288 55.556 6.09 0.00 46.14 2.71
5501 6179 2.359011 GGTCCGGAAAGGCCCATT 59.641 61.111 5.23 0.00 38.12 3.16
5603 6281 1.139455 ACAAGAAGTCGGTCGGGAAAA 59.861 47.619 0.00 0.00 0.00 2.29
5615 6293 1.894466 TCGGGAAAACTATGTCGGTCA 59.106 47.619 0.00 0.00 0.00 4.02
5704 6382 0.320374 CTGTCTGTTGGCGGAACCTA 59.680 55.000 0.00 0.00 40.22 3.08
5719 6397 5.137551 CGGAACCTATATTCCCAACCAATT 58.862 41.667 0.00 0.00 44.72 2.32
5755 6433 1.337071 CAGTGTCGTGGTGTAGTGACT 59.663 52.381 0.00 0.00 32.64 3.41
5756 6434 1.337071 AGTGTCGTGGTGTAGTGACTG 59.663 52.381 0.00 0.00 32.64 3.51
5757 6435 0.671796 TGTCGTGGTGTAGTGACTGG 59.328 55.000 0.00 0.00 32.64 4.00
5758 6436 0.666577 GTCGTGGTGTAGTGACTGGC 60.667 60.000 0.00 0.00 0.00 4.85
5759 6437 1.733041 CGTGGTGTAGTGACTGGCG 60.733 63.158 0.00 0.00 0.00 5.69
5760 6438 1.663739 GTGGTGTAGTGACTGGCGA 59.336 57.895 0.00 0.00 0.00 5.54
5761 6439 0.246635 GTGGTGTAGTGACTGGCGAT 59.753 55.000 0.00 0.00 0.00 4.58
5762 6440 1.475280 GTGGTGTAGTGACTGGCGATA 59.525 52.381 0.00 0.00 0.00 2.92
5763 6441 2.100916 GTGGTGTAGTGACTGGCGATAT 59.899 50.000 0.00 0.00 0.00 1.63
5764 6442 3.317149 GTGGTGTAGTGACTGGCGATATA 59.683 47.826 0.00 0.00 0.00 0.86
5765 6443 4.022242 GTGGTGTAGTGACTGGCGATATAT 60.022 45.833 0.00 0.00 0.00 0.86
5766 6444 4.022329 TGGTGTAGTGACTGGCGATATATG 60.022 45.833 0.00 0.00 0.00 1.78
5767 6445 4.217767 GGTGTAGTGACTGGCGATATATGA 59.782 45.833 0.00 0.00 0.00 2.15
5768 6446 5.105716 GGTGTAGTGACTGGCGATATATGAT 60.106 44.000 0.00 0.00 0.00 2.45
5769 6447 5.802451 GTGTAGTGACTGGCGATATATGATG 59.198 44.000 0.00 0.00 0.00 3.07
5770 6448 3.854666 AGTGACTGGCGATATATGATGC 58.145 45.455 0.00 0.00 0.00 3.91
5771 6449 3.259123 AGTGACTGGCGATATATGATGCA 59.741 43.478 0.00 0.00 0.00 3.96
5772 6450 3.996363 GTGACTGGCGATATATGATGCAA 59.004 43.478 0.00 0.00 0.00 4.08
5773 6451 4.452114 GTGACTGGCGATATATGATGCAAA 59.548 41.667 0.00 0.00 0.00 3.68
5774 6452 4.692155 TGACTGGCGATATATGATGCAAAG 59.308 41.667 0.00 0.00 0.00 2.77
5775 6453 4.645535 ACTGGCGATATATGATGCAAAGT 58.354 39.130 0.00 0.00 0.00 2.66
5776 6454 4.692625 ACTGGCGATATATGATGCAAAGTC 59.307 41.667 0.00 0.00 0.00 3.01
5777 6455 4.640364 TGGCGATATATGATGCAAAGTCA 58.360 39.130 0.00 0.00 0.00 3.41
5778 6456 4.692155 TGGCGATATATGATGCAAAGTCAG 59.308 41.667 0.00 0.00 0.00 3.51
5779 6457 4.931601 GGCGATATATGATGCAAAGTCAGA 59.068 41.667 0.00 0.00 0.00 3.27
5780 6458 5.163913 GGCGATATATGATGCAAAGTCAGAC 60.164 44.000 0.00 0.00 0.00 3.51
5781 6459 5.163913 GCGATATATGATGCAAAGTCAGACC 60.164 44.000 0.00 0.00 0.00 3.85
5782 6460 5.349817 CGATATATGATGCAAAGTCAGACCC 59.650 44.000 0.00 0.00 0.00 4.46
5783 6461 2.885135 ATGATGCAAAGTCAGACCCA 57.115 45.000 0.00 0.00 0.00 4.51
5784 6462 2.885135 TGATGCAAAGTCAGACCCAT 57.115 45.000 0.00 0.00 0.00 4.00
5785 6463 2.715046 TGATGCAAAGTCAGACCCATC 58.285 47.619 0.00 5.70 0.00 3.51
5786 6464 2.040145 TGATGCAAAGTCAGACCCATCA 59.960 45.455 14.82 14.82 37.37 3.07
5787 6465 2.655090 TGCAAAGTCAGACCCATCAA 57.345 45.000 0.00 0.00 0.00 2.57
5788 6466 2.229792 TGCAAAGTCAGACCCATCAAC 58.770 47.619 0.00 0.00 0.00 3.18
5789 6467 2.229792 GCAAAGTCAGACCCATCAACA 58.770 47.619 0.00 0.00 0.00 3.33
5790 6468 2.821969 GCAAAGTCAGACCCATCAACAT 59.178 45.455 0.00 0.00 0.00 2.71
5791 6469 3.256631 GCAAAGTCAGACCCATCAACATT 59.743 43.478 0.00 0.00 0.00 2.71
5792 6470 4.262164 GCAAAGTCAGACCCATCAACATTT 60.262 41.667 0.00 0.00 0.00 2.32
5793 6471 5.739935 GCAAAGTCAGACCCATCAACATTTT 60.740 40.000 0.00 0.00 0.00 1.82
5794 6472 5.458041 AAGTCAGACCCATCAACATTTTG 57.542 39.130 0.00 0.00 0.00 2.44
5795 6473 4.473444 AGTCAGACCCATCAACATTTTGT 58.527 39.130 0.00 0.00 34.02 2.83
5796 6474 5.630121 AGTCAGACCCATCAACATTTTGTA 58.370 37.500 0.00 0.00 34.02 2.41
5797 6475 5.473504 AGTCAGACCCATCAACATTTTGTAC 59.526 40.000 0.00 0.00 34.02 2.90
5798 6476 5.240623 GTCAGACCCATCAACATTTTGTACA 59.759 40.000 0.00 0.00 34.02 2.90
5799 6477 5.473162 TCAGACCCATCAACATTTTGTACAG 59.527 40.000 0.00 0.00 34.02 2.74
5800 6478 5.473162 CAGACCCATCAACATTTTGTACAGA 59.527 40.000 0.00 0.00 34.02 3.41
5801 6479 6.151648 CAGACCCATCAACATTTTGTACAGAT 59.848 38.462 0.00 0.00 34.02 2.90
5802 6480 6.721208 AGACCCATCAACATTTTGTACAGATT 59.279 34.615 0.00 0.00 34.02 2.40
5803 6481 7.233348 AGACCCATCAACATTTTGTACAGATTT 59.767 33.333 0.00 0.00 34.02 2.17
5804 6482 7.153985 ACCCATCAACATTTTGTACAGATTTG 58.846 34.615 0.00 0.00 34.02 2.32
5805 6483 6.091169 CCCATCAACATTTTGTACAGATTTGC 59.909 38.462 0.00 0.00 34.02 3.68
5806 6484 6.869913 CCATCAACATTTTGTACAGATTTGCT 59.130 34.615 0.00 0.00 34.02 3.91
5807 6485 8.028354 CCATCAACATTTTGTACAGATTTGCTA 58.972 33.333 0.00 0.00 34.02 3.49
5808 6486 9.409312 CATCAACATTTTGTACAGATTTGCTAA 57.591 29.630 0.00 0.00 34.02 3.09
5809 6487 9.979578 ATCAACATTTTGTACAGATTTGCTAAA 57.020 25.926 0.00 0.00 34.02 1.85
5810 6488 9.809096 TCAACATTTTGTACAGATTTGCTAAAA 57.191 25.926 0.00 0.00 34.02 1.52
5838 6516 8.498054 TTCATCTCACATCTAACTTTCCAATC 57.502 34.615 0.00 0.00 0.00 2.67
5839 6517 7.623630 TCATCTCACATCTAACTTTCCAATCA 58.376 34.615 0.00 0.00 0.00 2.57
5840 6518 7.550551 TCATCTCACATCTAACTTTCCAATCAC 59.449 37.037 0.00 0.00 0.00 3.06
5841 6519 6.768483 TCTCACATCTAACTTTCCAATCACA 58.232 36.000 0.00 0.00 0.00 3.58
5842 6520 7.397221 TCTCACATCTAACTTTCCAATCACAT 58.603 34.615 0.00 0.00 0.00 3.21
5843 6521 7.335171 TCTCACATCTAACTTTCCAATCACATG 59.665 37.037 0.00 0.00 0.00 3.21
5844 6522 7.167535 TCACATCTAACTTTCCAATCACATGA 58.832 34.615 0.00 0.00 0.00 3.07
5845 6523 7.830697 TCACATCTAACTTTCCAATCACATGAT 59.169 33.333 0.00 0.00 36.07 2.45
5846 6524 8.464404 CACATCTAACTTTCCAATCACATGATT 58.536 33.333 0.00 1.11 44.93 2.57
5847 6525 9.028284 ACATCTAACTTTCCAATCACATGATTT 57.972 29.630 0.00 0.00 42.41 2.17
5850 6528 9.958180 TCTAACTTTCCAATCACATGATTTAGA 57.042 29.630 0.00 5.40 42.41 2.10
5851 6529 9.994432 CTAACTTTCCAATCACATGATTTAGAC 57.006 33.333 0.00 0.00 42.41 2.59
5852 6530 8.408043 AACTTTCCAATCACATGATTTAGACA 57.592 30.769 0.00 0.00 42.41 3.41
5853 6531 8.408043 ACTTTCCAATCACATGATTTAGACAA 57.592 30.769 0.00 3.17 42.41 3.18
5854 6532 8.299570 ACTTTCCAATCACATGATTTAGACAAC 58.700 33.333 0.00 0.00 42.41 3.32
5855 6533 7.757941 TTCCAATCACATGATTTAGACAACA 57.242 32.000 0.00 0.00 42.41 3.33
5856 6534 7.757941 TCCAATCACATGATTTAGACAACAA 57.242 32.000 0.00 0.00 42.41 2.83
5857 6535 7.819644 TCCAATCACATGATTTAGACAACAAG 58.180 34.615 0.00 0.00 42.41 3.16
5858 6536 7.665145 TCCAATCACATGATTTAGACAACAAGA 59.335 33.333 0.00 0.00 42.41 3.02
5859 6537 8.464404 CCAATCACATGATTTAGACAACAAGAT 58.536 33.333 0.00 0.00 42.41 2.40
5860 6538 9.850628 CAATCACATGATTTAGACAACAAGATT 57.149 29.630 0.00 0.00 42.41 2.40
5861 6539 9.850628 AATCACATGATTTAGACAACAAGATTG 57.149 29.630 0.00 0.00 41.64 2.67
5862 6540 8.620116 TCACATGATTTAGACAACAAGATTGA 57.380 30.769 0.00 0.00 0.00 2.57
5863 6541 9.234827 TCACATGATTTAGACAACAAGATTGAT 57.765 29.630 0.00 0.00 0.00 2.57
5895 6573 8.527567 TTTTCTTTTGTTTAGTGTTGTTCCTG 57.472 30.769 0.00 0.00 0.00 3.86
5896 6574 6.827586 TCTTTTGTTTAGTGTTGTTCCTGT 57.172 33.333 0.00 0.00 0.00 4.00
5897 6575 7.925043 TCTTTTGTTTAGTGTTGTTCCTGTA 57.075 32.000 0.00 0.00 0.00 2.74
5898 6576 7.754625 TCTTTTGTTTAGTGTTGTTCCTGTAC 58.245 34.615 0.00 0.00 0.00 2.90
5899 6577 7.608761 TCTTTTGTTTAGTGTTGTTCCTGTACT 59.391 33.333 0.00 0.00 0.00 2.73
5900 6578 6.913873 TTGTTTAGTGTTGTTCCTGTACTC 57.086 37.500 0.00 0.00 0.00 2.59
5901 6579 5.045215 TGTTTAGTGTTGTTCCTGTACTCG 58.955 41.667 0.00 0.00 0.00 4.18
5902 6580 4.924305 TTAGTGTTGTTCCTGTACTCGT 57.076 40.909 0.00 0.00 0.00 4.18
5903 6581 3.366440 AGTGTTGTTCCTGTACTCGTC 57.634 47.619 0.00 0.00 0.00 4.20
5904 6582 2.035576 AGTGTTGTTCCTGTACTCGTCC 59.964 50.000 0.00 0.00 0.00 4.79
5905 6583 1.342174 TGTTGTTCCTGTACTCGTCCC 59.658 52.381 0.00 0.00 0.00 4.46
5906 6584 1.617357 GTTGTTCCTGTACTCGTCCCT 59.383 52.381 0.00 0.00 0.00 4.20
5907 6585 1.542492 TGTTCCTGTACTCGTCCCTC 58.458 55.000 0.00 0.00 0.00 4.30
5908 6586 0.450983 GTTCCTGTACTCGTCCCTCG 59.549 60.000 0.00 0.00 41.41 4.63
5909 6587 1.310933 TTCCTGTACTCGTCCCTCGC 61.311 60.000 0.00 0.00 39.67 5.03
5910 6588 2.403987 CTGTACTCGTCCCTCGCG 59.596 66.667 0.00 0.00 39.67 5.87
5911 6589 2.359107 TGTACTCGTCCCTCGCGT 60.359 61.111 5.77 0.00 40.61 6.01
5912 6590 2.099831 GTACTCGTCCCTCGCGTG 59.900 66.667 5.77 2.75 38.01 5.34
5913 6591 2.046988 TACTCGTCCCTCGCGTGA 60.047 61.111 10.21 0.00 38.01 4.35
5914 6592 2.104859 TACTCGTCCCTCGCGTGAG 61.105 63.158 19.15 19.15 38.01 3.51
5915 6593 2.511545 TACTCGTCCCTCGCGTGAGA 62.512 60.000 27.11 5.63 45.57 3.27
5916 6594 2.670592 TCGTCCCTCGCGTGAGAA 60.671 61.111 27.11 11.92 45.57 2.87
5917 6595 2.202492 CGTCCCTCGCGTGAGAAG 60.202 66.667 27.11 17.20 45.57 2.85
5918 6596 2.182030 GTCCCTCGCGTGAGAAGG 59.818 66.667 27.11 19.59 45.57 3.46
5919 6597 2.282958 TCCCTCGCGTGAGAAGGT 60.283 61.111 27.11 0.00 45.57 3.50
5920 6598 1.906824 TCCCTCGCGTGAGAAGGTT 60.907 57.895 27.11 0.00 45.57 3.50
5921 6599 1.738099 CCCTCGCGTGAGAAGGTTG 60.738 63.158 27.11 8.99 45.57 3.77
5922 6600 1.006102 CCTCGCGTGAGAAGGTTGT 60.006 57.895 27.11 0.00 45.57 3.32
5923 6601 0.242825 CCTCGCGTGAGAAGGTTGTA 59.757 55.000 27.11 0.00 45.57 2.41
5924 6602 1.135083 CCTCGCGTGAGAAGGTTGTAT 60.135 52.381 27.11 0.00 45.57 2.29
5925 6603 2.186076 CTCGCGTGAGAAGGTTGTATC 58.814 52.381 21.40 0.00 45.57 2.24
5926 6604 1.816835 TCGCGTGAGAAGGTTGTATCT 59.183 47.619 5.77 0.00 0.00 1.98
5927 6605 2.159421 TCGCGTGAGAAGGTTGTATCTC 60.159 50.000 5.77 0.00 41.95 2.75
5928 6606 2.159366 CGCGTGAGAAGGTTGTATCTCT 60.159 50.000 0.00 0.00 42.07 3.10
5929 6607 3.064958 CGCGTGAGAAGGTTGTATCTCTA 59.935 47.826 0.00 0.00 42.07 2.43
5930 6608 4.352887 GCGTGAGAAGGTTGTATCTCTAC 58.647 47.826 4.62 1.45 42.07 2.59
5931 6609 4.096682 GCGTGAGAAGGTTGTATCTCTACT 59.903 45.833 4.62 0.00 42.07 2.57
5932 6610 5.731126 GCGTGAGAAGGTTGTATCTCTACTC 60.731 48.000 4.62 0.00 42.07 2.59
5933 6611 5.220892 CGTGAGAAGGTTGTATCTCTACTCC 60.221 48.000 4.62 0.00 42.07 3.85
5934 6612 5.889289 GTGAGAAGGTTGTATCTCTACTCCT 59.111 44.000 4.62 0.00 42.07 3.69
5935 6613 7.055378 GTGAGAAGGTTGTATCTCTACTCCTA 58.945 42.308 4.62 0.00 42.07 2.94
5936 6614 7.556996 GTGAGAAGGTTGTATCTCTACTCCTAA 59.443 40.741 4.62 0.00 42.07 2.69
5937 6615 8.282982 TGAGAAGGTTGTATCTCTACTCCTAAT 58.717 37.037 4.62 0.00 42.07 1.73
5938 6616 8.472007 AGAAGGTTGTATCTCTACTCCTAATG 57.528 38.462 0.00 0.00 34.36 1.90
5939 6617 7.507616 AGAAGGTTGTATCTCTACTCCTAATGG 59.492 40.741 0.00 0.00 34.36 3.16
5940 6618 6.923670 AGGTTGTATCTCTACTCCTAATGGA 58.076 40.000 0.00 0.00 40.69 3.41
5950 6628 2.787473 TCCTAATGGAGCAGTTGGTG 57.213 50.000 0.00 0.00 37.46 4.17
5951 6629 2.265367 TCCTAATGGAGCAGTTGGTGA 58.735 47.619 0.00 0.00 37.46 4.02
5952 6630 2.642311 TCCTAATGGAGCAGTTGGTGAA 59.358 45.455 0.00 0.00 37.46 3.18
5953 6631 3.266772 TCCTAATGGAGCAGTTGGTGAAT 59.733 43.478 0.00 0.00 37.46 2.57
5954 6632 4.473196 TCCTAATGGAGCAGTTGGTGAATA 59.527 41.667 0.00 0.00 37.46 1.75
5955 6633 4.818546 CCTAATGGAGCAGTTGGTGAATAG 59.181 45.833 0.00 0.00 34.57 1.73
5956 6634 4.307032 AATGGAGCAGTTGGTGAATAGT 57.693 40.909 0.00 0.00 0.00 2.12
5957 6635 3.334583 TGGAGCAGTTGGTGAATAGTC 57.665 47.619 0.00 0.00 0.00 2.59
5958 6636 2.906389 TGGAGCAGTTGGTGAATAGTCT 59.094 45.455 0.00 0.00 0.00 3.24
5959 6637 3.055819 TGGAGCAGTTGGTGAATAGTCTC 60.056 47.826 0.00 0.00 0.00 3.36
5960 6638 3.526534 GAGCAGTTGGTGAATAGTCTCC 58.473 50.000 4.36 4.36 37.83 3.71
5961 6639 2.906389 AGCAGTTGGTGAATAGTCTCCA 59.094 45.455 9.77 9.77 43.97 3.86
5962 6640 3.003480 GCAGTTGGTGAATAGTCTCCAC 58.997 50.000 13.16 8.98 45.03 4.02
5963 6641 3.254060 CAGTTGGTGAATAGTCTCCACG 58.746 50.000 13.16 2.48 45.03 4.94
5964 6642 2.233922 AGTTGGTGAATAGTCTCCACGG 59.766 50.000 13.16 0.00 45.03 4.94
5965 6643 1.933021 TGGTGAATAGTCTCCACGGT 58.067 50.000 9.77 0.00 41.46 4.83
5966 6644 2.253610 TGGTGAATAGTCTCCACGGTT 58.746 47.619 9.77 0.00 41.46 4.44
5967 6645 2.635915 TGGTGAATAGTCTCCACGGTTT 59.364 45.455 9.77 0.00 41.46 3.27
5968 6646 3.833650 TGGTGAATAGTCTCCACGGTTTA 59.166 43.478 9.77 0.00 41.46 2.01
5969 6647 4.468510 TGGTGAATAGTCTCCACGGTTTAT 59.531 41.667 9.77 0.00 41.46 1.40
5970 6648 5.046159 TGGTGAATAGTCTCCACGGTTTATT 60.046 40.000 9.77 0.00 41.46 1.40
5971 6649 5.878669 GGTGAATAGTCTCCACGGTTTATTT 59.121 40.000 6.41 0.00 37.37 1.40
5972 6650 6.373495 GGTGAATAGTCTCCACGGTTTATTTT 59.627 38.462 6.41 0.00 37.37 1.82
5973 6651 7.413767 GGTGAATAGTCTCCACGGTTTATTTTC 60.414 40.741 6.41 0.00 37.37 2.29
5974 6652 6.311935 TGAATAGTCTCCACGGTTTATTTTCG 59.688 38.462 0.00 0.00 0.00 3.46
5975 6653 3.999046 AGTCTCCACGGTTTATTTTCGT 58.001 40.909 0.00 0.00 37.64 3.85
5976 6654 4.383173 AGTCTCCACGGTTTATTTTCGTT 58.617 39.130 0.00 0.00 34.73 3.85
5977 6655 4.212636 AGTCTCCACGGTTTATTTTCGTTG 59.787 41.667 0.00 0.00 34.73 4.10
5978 6656 4.211794 GTCTCCACGGTTTATTTTCGTTGA 59.788 41.667 0.00 0.00 34.73 3.18
5979 6657 4.998672 TCTCCACGGTTTATTTTCGTTGAT 59.001 37.500 0.00 0.00 34.73 2.57
5980 6658 5.470777 TCTCCACGGTTTATTTTCGTTGATT 59.529 36.000 0.00 0.00 34.73 2.57
5981 6659 6.016943 TCTCCACGGTTTATTTTCGTTGATTT 60.017 34.615 0.00 0.00 34.73 2.17
5982 6660 6.505272 TCCACGGTTTATTTTCGTTGATTTT 58.495 32.000 0.00 0.00 34.73 1.82
5983 6661 6.979238 TCCACGGTTTATTTTCGTTGATTTTT 59.021 30.769 0.00 0.00 34.73 1.94
6000 6678 2.833631 TTTTTCGTCTCTCCTCCCAC 57.166 50.000 0.00 0.00 0.00 4.61
6001 6679 0.974383 TTTTCGTCTCTCCTCCCACC 59.026 55.000 0.00 0.00 0.00 4.61
6002 6680 0.178944 TTTCGTCTCTCCTCCCACCA 60.179 55.000 0.00 0.00 0.00 4.17
6003 6681 0.898789 TTCGTCTCTCCTCCCACCAC 60.899 60.000 0.00 0.00 0.00 4.16
6004 6682 2.352032 CGTCTCTCCTCCCACCACC 61.352 68.421 0.00 0.00 0.00 4.61
6005 6683 1.990614 GTCTCTCCTCCCACCACCC 60.991 68.421 0.00 0.00 0.00 4.61
6006 6684 2.689034 CTCTCCTCCCACCACCCC 60.689 72.222 0.00 0.00 0.00 4.95
6007 6685 4.348495 TCTCCTCCCACCACCCCC 62.348 72.222 0.00 0.00 0.00 5.40
6008 6686 4.354943 CTCCTCCCACCACCCCCT 62.355 72.222 0.00 0.00 0.00 4.79
6009 6687 4.348495 TCCTCCCACCACCCCCTC 62.348 72.222 0.00 0.00 0.00 4.30
6014 6692 3.420482 CCACCACCCCCTCCCATC 61.420 72.222 0.00 0.00 0.00 3.51
6015 6693 3.420482 CACCACCCCCTCCCATCC 61.420 72.222 0.00 0.00 0.00 3.51
6016 6694 3.637544 ACCACCCCCTCCCATCCT 61.638 66.667 0.00 0.00 0.00 3.24
6017 6695 3.099170 CCACCCCCTCCCATCCTG 61.099 72.222 0.00 0.00 0.00 3.86
6018 6696 3.099170 CACCCCCTCCCATCCTGG 61.099 72.222 0.00 0.00 37.25 4.45
6019 6697 3.637544 ACCCCCTCCCATCCTGGT 61.638 66.667 0.00 0.00 35.17 4.00
6020 6698 2.287194 CCCCCTCCCATCCTGGTT 60.287 66.667 0.00 0.00 35.17 3.67
6021 6699 2.386935 CCCCCTCCCATCCTGGTTC 61.387 68.421 0.00 0.00 35.17 3.62
6022 6700 1.619363 CCCCTCCCATCCTGGTTCA 60.619 63.158 0.00 0.00 35.17 3.18
6023 6701 0.995675 CCCCTCCCATCCTGGTTCAT 60.996 60.000 0.00 0.00 35.17 2.57
6024 6702 0.475906 CCCTCCCATCCTGGTTCATC 59.524 60.000 0.00 0.00 35.17 2.92
6025 6703 0.107456 CCTCCCATCCTGGTTCATCG 59.893 60.000 0.00 0.00 35.17 3.84
6026 6704 1.123077 CTCCCATCCTGGTTCATCGA 58.877 55.000 0.00 0.00 35.17 3.59
6027 6705 1.696336 CTCCCATCCTGGTTCATCGAT 59.304 52.381 0.00 0.00 35.17 3.59
6028 6706 2.105477 CTCCCATCCTGGTTCATCGATT 59.895 50.000 0.00 0.00 35.17 3.34
6029 6707 2.509548 TCCCATCCTGGTTCATCGATTT 59.490 45.455 0.00 0.00 35.17 2.17
6030 6708 3.714280 TCCCATCCTGGTTCATCGATTTA 59.286 43.478 0.00 0.00 35.17 1.40
6031 6709 4.350816 TCCCATCCTGGTTCATCGATTTAT 59.649 41.667 0.00 0.00 35.17 1.40
6032 6710 5.072741 CCCATCCTGGTTCATCGATTTATT 58.927 41.667 0.00 0.00 35.17 1.40
6033 6711 5.536161 CCCATCCTGGTTCATCGATTTATTT 59.464 40.000 0.00 0.00 35.17 1.40
6034 6712 6.040842 CCCATCCTGGTTCATCGATTTATTTT 59.959 38.462 0.00 0.00 35.17 1.82
6035 6713 7.417797 CCCATCCTGGTTCATCGATTTATTTTT 60.418 37.037 0.00 0.00 35.17 1.94
6036 6714 7.649306 CCATCCTGGTTCATCGATTTATTTTTC 59.351 37.037 0.00 0.00 31.35 2.29
6037 6715 7.938140 TCCTGGTTCATCGATTTATTTTTCT 57.062 32.000 0.00 0.00 0.00 2.52
6038 6716 7.985476 TCCTGGTTCATCGATTTATTTTTCTC 58.015 34.615 0.00 0.00 0.00 2.87
6039 6717 7.829211 TCCTGGTTCATCGATTTATTTTTCTCT 59.171 33.333 0.00 0.00 0.00 3.10
6040 6718 8.125448 CCTGGTTCATCGATTTATTTTTCTCTC 58.875 37.037 0.00 0.00 0.00 3.20
6041 6719 7.985476 TGGTTCATCGATTTATTTTTCTCTCC 58.015 34.615 0.00 0.00 0.00 3.71
6042 6720 7.609918 TGGTTCATCGATTTATTTTTCTCTCCA 59.390 33.333 0.00 0.00 0.00 3.86
6043 6721 7.910683 GGTTCATCGATTTATTTTTCTCTCCAC 59.089 37.037 0.00 0.00 0.00 4.02
6044 6722 8.669243 GTTCATCGATTTATTTTTCTCTCCACT 58.331 33.333 0.00 0.00 0.00 4.00
6045 6723 8.425577 TCATCGATTTATTTTTCTCTCCACTC 57.574 34.615 0.00 0.00 0.00 3.51
6046 6724 8.260818 TCATCGATTTATTTTTCTCTCCACTCT 58.739 33.333 0.00 0.00 0.00 3.24
6047 6725 8.887717 CATCGATTTATTTTTCTCTCCACTCTT 58.112 33.333 0.00 0.00 0.00 2.85
6048 6726 8.848474 TCGATTTATTTTTCTCTCCACTCTTT 57.152 30.769 0.00 0.00 0.00 2.52
6049 6727 9.938280 TCGATTTATTTTTCTCTCCACTCTTTA 57.062 29.630 0.00 0.00 0.00 1.85
6057 6735 8.617290 TTTTCTCTCCACTCTTTATTACAACC 57.383 34.615 0.00 0.00 0.00 3.77
6058 6736 6.928348 TCTCTCCACTCTTTATTACAACCA 57.072 37.500 0.00 0.00 0.00 3.67
6059 6737 6.936279 TCTCTCCACTCTTTATTACAACCAG 58.064 40.000 0.00 0.00 0.00 4.00
6060 6738 6.724441 TCTCTCCACTCTTTATTACAACCAGA 59.276 38.462 0.00 0.00 0.00 3.86
6061 6739 7.234782 TCTCTCCACTCTTTATTACAACCAGAA 59.765 37.037 0.00 0.00 0.00 3.02
6062 6740 7.159372 TCTCCACTCTTTATTACAACCAGAAC 58.841 38.462 0.00 0.00 0.00 3.01
6063 6741 7.016268 TCTCCACTCTTTATTACAACCAGAACT 59.984 37.037 0.00 0.00 0.00 3.01
6064 6742 7.514721 TCCACTCTTTATTACAACCAGAACTT 58.485 34.615 0.00 0.00 0.00 2.66
6065 6743 7.996644 TCCACTCTTTATTACAACCAGAACTTT 59.003 33.333 0.00 0.00 0.00 2.66
6066 6744 8.290325 CCACTCTTTATTACAACCAGAACTTTC 58.710 37.037 0.00 0.00 0.00 2.62
6067 6745 8.290325 CACTCTTTATTACAACCAGAACTTTCC 58.710 37.037 0.00 0.00 0.00 3.13
6068 6746 8.218488 ACTCTTTATTACAACCAGAACTTTCCT 58.782 33.333 0.00 0.00 0.00 3.36
6069 6747 9.720769 CTCTTTATTACAACCAGAACTTTCCTA 57.279 33.333 0.00 0.00 0.00 2.94
6072 6750 9.629878 TTTATTACAACCAGAACTTTCCTAACA 57.370 29.630 0.00 0.00 0.00 2.41
6073 6751 9.802039 TTATTACAACCAGAACTTTCCTAACAT 57.198 29.630 0.00 0.00 0.00 2.71
6075 6753 9.975218 ATTACAACCAGAACTTTCCTAACATAT 57.025 29.630 0.00 0.00 0.00 1.78
6078 6756 9.227777 ACAACCAGAACTTTCCTAACATATAAC 57.772 33.333 0.00 0.00 0.00 1.89
6079 6757 9.226606 CAACCAGAACTTTCCTAACATATAACA 57.773 33.333 0.00 0.00 0.00 2.41
6080 6758 9.802039 AACCAGAACTTTCCTAACATATAACAA 57.198 29.630 0.00 0.00 0.00 2.83
6081 6759 9.802039 ACCAGAACTTTCCTAACATATAACAAA 57.198 29.630 0.00 0.00 0.00 2.83
6087 6765 8.889717 ACTTTCCTAACATATAACAAATCACGG 58.110 33.333 0.00 0.00 0.00 4.94
6088 6766 9.104965 CTTTCCTAACATATAACAAATCACGGA 57.895 33.333 0.00 0.00 0.00 4.69
6089 6767 9.621629 TTTCCTAACATATAACAAATCACGGAT 57.378 29.630 0.00 0.00 0.00 4.18
6090 6768 8.827177 TCCTAACATATAACAAATCACGGATC 57.173 34.615 0.00 0.00 0.00 3.36
6091 6769 8.647796 TCCTAACATATAACAAATCACGGATCT 58.352 33.333 0.00 0.00 0.00 2.75
6092 6770 9.923143 CCTAACATATAACAAATCACGGATCTA 57.077 33.333 0.00 0.00 0.00 1.98
6095 6773 9.832445 AACATATAACAAATCACGGATCTAACT 57.168 29.630 0.00 0.00 0.00 2.24
6096 6774 9.832445 ACATATAACAAATCACGGATCTAACTT 57.168 29.630 0.00 0.00 0.00 2.66
6098 6776 7.787725 ATAACAAATCACGGATCTAACTTCC 57.212 36.000 0.00 0.00 0.00 3.46
6099 6777 5.422214 ACAAATCACGGATCTAACTTCCT 57.578 39.130 0.00 0.00 0.00 3.36
6100 6778 5.805728 ACAAATCACGGATCTAACTTCCTT 58.194 37.500 0.00 0.00 0.00 3.36
6101 6779 6.942976 ACAAATCACGGATCTAACTTCCTTA 58.057 36.000 0.00 0.00 0.00 2.69
6102 6780 7.391620 ACAAATCACGGATCTAACTTCCTTAA 58.608 34.615 0.00 0.00 0.00 1.85
6103 6781 7.881232 ACAAATCACGGATCTAACTTCCTTAAA 59.119 33.333 0.00 0.00 0.00 1.52
6104 6782 8.893727 CAAATCACGGATCTAACTTCCTTAAAT 58.106 33.333 0.00 0.00 0.00 1.40
6105 6783 9.462606 AAATCACGGATCTAACTTCCTTAAATT 57.537 29.630 0.00 0.00 0.00 1.82
6134 6812 9.573166 TCATATCAATCGATTCCTTTTATTGGT 57.427 29.630 7.92 0.00 32.73 3.67
6137 6815 7.695480 TCAATCGATTCCTTTTATTGGTTCA 57.305 32.000 7.92 0.00 0.00 3.18
6138 6816 8.116651 TCAATCGATTCCTTTTATTGGTTCAA 57.883 30.769 7.92 0.00 0.00 2.69
6139 6817 8.748412 TCAATCGATTCCTTTTATTGGTTCAAT 58.252 29.630 7.92 0.00 37.80 2.57
6140 6818 9.369904 CAATCGATTCCTTTTATTGGTTCAATT 57.630 29.630 7.92 0.00 35.54 2.32
6141 6819 9.942850 AATCGATTCCTTTTATTGGTTCAATTT 57.057 25.926 4.39 0.00 35.54 1.82
6142 6820 8.755696 TCGATTCCTTTTATTGGTTCAATTTG 57.244 30.769 0.00 0.00 35.54 2.32
6143 6821 8.364142 TCGATTCCTTTTATTGGTTCAATTTGT 58.636 29.630 0.00 0.00 35.54 2.83
6144 6822 8.647226 CGATTCCTTTTATTGGTTCAATTTGTC 58.353 33.333 0.00 0.00 35.54 3.18
6145 6823 9.710900 GATTCCTTTTATTGGTTCAATTTGTCT 57.289 29.630 0.00 0.00 35.54 3.41
6148 6826 9.974980 TCCTTTTATTGGTTCAATTTGTCTTAC 57.025 29.630 0.00 0.00 35.54 2.34
6149 6827 8.911662 CCTTTTATTGGTTCAATTTGTCTTACG 58.088 33.333 0.00 0.00 35.54 3.18
6150 6828 9.672086 CTTTTATTGGTTCAATTTGTCTTACGA 57.328 29.630 0.00 0.00 35.54 3.43
6153 6831 7.924103 ATTGGTTCAATTTGTCTTACGAAAC 57.076 32.000 0.00 0.00 28.76 2.78
6154 6832 6.438259 TGGTTCAATTTGTCTTACGAAACA 57.562 33.333 0.00 0.00 0.00 2.83
6155 6833 6.853720 TGGTTCAATTTGTCTTACGAAACAA 58.146 32.000 0.00 0.00 33.74 2.83
6156 6834 7.313646 TGGTTCAATTTGTCTTACGAAACAAA 58.686 30.769 3.45 3.45 46.16 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 7.455058 ACCAGTGTACTAATTTGTTACCATCA 58.545 34.615 0.00 0.00 0.00 3.07
72 74 0.242825 TCGAGGCTGTTACAACTCCG 59.757 55.000 0.00 3.56 0.00 4.63
112 119 3.677284 CTGCGAGCTCACAGGCCAT 62.677 63.158 21.68 0.00 0.00 4.40
144 151 2.747460 ACCGGCGCTACTACGACA 60.747 61.111 7.64 0.00 42.81 4.35
177 184 2.516930 CCTTCGCCATGGCCGAAT 60.517 61.111 30.58 0.00 37.98 3.34
280 335 2.002586 CTCAGACGCCATTGTTGTAGG 58.997 52.381 0.00 0.00 0.00 3.18
286 341 2.030805 GCTTTTTCTCAGACGCCATTGT 60.031 45.455 0.00 0.00 0.00 2.71
307 362 1.584175 CTGCTGCTTCTGCCTATCTG 58.416 55.000 0.00 0.00 38.71 2.90
368 426 0.032952 TTTCGAGTACGGCTGCTGTT 59.967 50.000 20.58 1.84 40.21 3.16
383 441 4.254510 CGCTTTCGTTTTCTTATCGTTTCG 59.745 41.667 0.00 0.00 0.00 3.46
388 446 3.120786 ACACCGCTTTCGTTTTCTTATCG 60.121 43.478 0.00 0.00 0.00 2.92
431 490 1.606737 GCGCTAAAGCAGGAGGGATAG 60.607 57.143 0.00 0.00 42.21 2.08
433 492 1.147153 GCGCTAAAGCAGGAGGGAT 59.853 57.895 0.00 0.00 42.21 3.85
468 528 0.390124 AAACTGCGGTTGGTCGACTA 59.610 50.000 16.46 6.50 35.63 2.59
549 609 4.209288 GCATTACATGGCAACTACGAGTAG 59.791 45.833 8.58 8.58 39.04 2.57
550 610 4.116961 GCATTACATGGCAACTACGAGTA 58.883 43.478 0.00 0.00 37.61 2.59
551 611 2.936498 GCATTACATGGCAACTACGAGT 59.064 45.455 0.00 0.00 37.61 4.18
552 612 3.592381 GCATTACATGGCAACTACGAG 57.408 47.619 0.00 0.00 37.61 4.18
562 622 5.327616 TCACTTTTCATGGCATTACATGG 57.672 39.130 0.00 0.00 46.33 3.66
564 624 6.542005 TCGTATCACTTTTCATGGCATTACAT 59.458 34.615 0.00 0.00 0.00 2.29
565 625 5.877564 TCGTATCACTTTTCATGGCATTACA 59.122 36.000 0.00 0.00 0.00 2.41
566 626 6.358118 TCGTATCACTTTTCATGGCATTAC 57.642 37.500 0.00 0.00 0.00 1.89
567 627 6.038161 CCTTCGTATCACTTTTCATGGCATTA 59.962 38.462 0.00 0.00 0.00 1.90
568 628 5.163622 CCTTCGTATCACTTTTCATGGCATT 60.164 40.000 0.00 0.00 0.00 3.56
569 629 4.336433 CCTTCGTATCACTTTTCATGGCAT 59.664 41.667 0.00 0.00 0.00 4.40
570 630 3.689161 CCTTCGTATCACTTTTCATGGCA 59.311 43.478 0.00 0.00 0.00 4.92
571 631 3.689649 ACCTTCGTATCACTTTTCATGGC 59.310 43.478 0.00 0.00 0.00 4.40
572 632 4.032900 CGACCTTCGTATCACTTTTCATGG 59.967 45.833 0.00 0.00 34.72 3.66
573 633 4.492570 GCGACCTTCGTATCACTTTTCATG 60.493 45.833 0.00 0.00 42.81 3.07
574 634 3.617263 GCGACCTTCGTATCACTTTTCAT 59.383 43.478 0.00 0.00 42.81 2.57
575 635 2.991190 GCGACCTTCGTATCACTTTTCA 59.009 45.455 0.00 0.00 42.81 2.69
576 636 3.251571 AGCGACCTTCGTATCACTTTTC 58.748 45.455 0.00 0.00 42.81 2.29
577 637 3.314541 AGCGACCTTCGTATCACTTTT 57.685 42.857 0.00 0.00 42.81 2.27
578 638 2.993899 CAAGCGACCTTCGTATCACTTT 59.006 45.455 0.00 0.00 42.81 2.66
579 639 2.607187 CAAGCGACCTTCGTATCACTT 58.393 47.619 0.00 0.00 42.81 3.16
580 640 1.736032 GCAAGCGACCTTCGTATCACT 60.736 52.381 0.00 0.00 42.81 3.41
581 641 0.645868 GCAAGCGACCTTCGTATCAC 59.354 55.000 0.00 0.00 42.81 3.06
582 642 0.800683 CGCAAGCGACCTTCGTATCA 60.801 55.000 9.11 0.00 42.81 2.15
583 643 1.480219 CCGCAAGCGACCTTCGTATC 61.480 60.000 16.97 0.00 42.81 2.24
584 644 1.518572 CCGCAAGCGACCTTCGTAT 60.519 57.895 16.97 0.00 42.81 3.06
585 645 2.126228 CCGCAAGCGACCTTCGTA 60.126 61.111 16.97 0.00 42.81 3.43
586 646 4.295119 ACCGCAAGCGACCTTCGT 62.295 61.111 16.97 0.74 42.81 3.85
587 647 3.777925 CACCGCAAGCGACCTTCG 61.778 66.667 16.97 0.05 43.89 3.79
588 648 4.090057 GCACCGCAAGCGACCTTC 62.090 66.667 16.97 0.00 42.83 3.46
589 649 4.927782 TGCACCGCAAGCGACCTT 62.928 61.111 16.97 0.00 42.83 3.50
590 650 4.927782 TTGCACCGCAAGCGACCT 62.928 61.111 16.97 0.00 43.99 3.85
598 658 0.246910 ATCAATTGCATTGCACCGCA 59.753 45.000 11.66 5.13 38.71 5.69
599 659 0.925466 GATCAATTGCATTGCACCGC 59.075 50.000 11.66 0.00 38.71 5.68
600 660 2.281140 TGATCAATTGCATTGCACCG 57.719 45.000 11.66 2.81 38.71 4.94
601 661 3.615496 GTCTTGATCAATTGCATTGCACC 59.385 43.478 11.66 0.00 38.71 5.01
602 662 4.491676 AGTCTTGATCAATTGCATTGCAC 58.508 39.130 11.66 0.00 38.71 4.57
603 663 4.218852 TGAGTCTTGATCAATTGCATTGCA 59.781 37.500 8.96 7.38 40.05 4.08
604 664 4.561606 GTGAGTCTTGATCAATTGCATTGC 59.438 41.667 8.96 0.46 40.05 3.56
605 665 5.950883 AGTGAGTCTTGATCAATTGCATTG 58.049 37.500 8.96 0.00 41.57 2.82
606 666 6.656270 TGTAGTGAGTCTTGATCAATTGCATT 59.344 34.615 8.96 5.07 0.00 3.56
607 667 6.093219 GTGTAGTGAGTCTTGATCAATTGCAT 59.907 38.462 8.96 0.00 0.00 3.96
608 668 5.409520 GTGTAGTGAGTCTTGATCAATTGCA 59.590 40.000 8.96 2.71 0.00 4.08
609 669 5.163814 GGTGTAGTGAGTCTTGATCAATTGC 60.164 44.000 8.96 2.47 0.00 3.56
610 670 5.934043 TGGTGTAGTGAGTCTTGATCAATTG 59.066 40.000 8.96 0.00 0.00 2.32
611 671 5.934625 GTGGTGTAGTGAGTCTTGATCAATT 59.065 40.000 8.96 0.00 0.00 2.32
612 672 5.482908 GTGGTGTAGTGAGTCTTGATCAAT 58.517 41.667 8.96 0.00 0.00 2.57
613 673 4.558697 CGTGGTGTAGTGAGTCTTGATCAA 60.559 45.833 8.12 8.12 0.00 2.57
614 674 3.057526 CGTGGTGTAGTGAGTCTTGATCA 60.058 47.826 0.00 0.00 0.00 2.92
615 675 3.502920 CGTGGTGTAGTGAGTCTTGATC 58.497 50.000 0.00 0.00 0.00 2.92
616 676 2.352814 GCGTGGTGTAGTGAGTCTTGAT 60.353 50.000 0.00 0.00 0.00 2.57
617 677 1.000607 GCGTGGTGTAGTGAGTCTTGA 60.001 52.381 0.00 0.00 0.00 3.02
618 678 1.269569 TGCGTGGTGTAGTGAGTCTTG 60.270 52.381 0.00 0.00 0.00 3.02
619 679 1.037493 TGCGTGGTGTAGTGAGTCTT 58.963 50.000 0.00 0.00 0.00 3.01
620 680 0.314302 GTGCGTGGTGTAGTGAGTCT 59.686 55.000 0.00 0.00 0.00 3.24
621 681 0.666577 GGTGCGTGGTGTAGTGAGTC 60.667 60.000 0.00 0.00 0.00 3.36
622 682 1.366366 GGTGCGTGGTGTAGTGAGT 59.634 57.895 0.00 0.00 0.00 3.41
623 683 0.667487 CTGGTGCGTGGTGTAGTGAG 60.667 60.000 0.00 0.00 0.00 3.51
624 684 1.110518 TCTGGTGCGTGGTGTAGTGA 61.111 55.000 0.00 0.00 0.00 3.41
671 731 7.060383 CCAACTGTCTGATGGTATTAGAGAT 57.940 40.000 0.00 0.00 34.34 2.75
690 750 5.205056 TGATACAACTTTTCCCAACCAACT 58.795 37.500 0.00 0.00 0.00 3.16
755 815 9.935241 ACATTAAATATATGAGCATTCTCGACT 57.065 29.630 0.00 0.00 42.26 4.18
788 848 1.065251 GTCCTCGTATTCCCGACTGAC 59.935 57.143 0.00 0.00 32.57 3.51
815 875 4.474303 TTAATCCCCGACCCATAGTCTA 57.526 45.455 0.00 0.00 43.91 2.59
891 951 5.454520 GCTAGTTTTGGCGCTAACTTTTTA 58.545 37.500 21.57 8.60 36.16 1.52
944 1004 1.489230 GGATTTAGGAGCGAAAGGGGA 59.511 52.381 0.00 0.00 0.00 4.81
1093 1153 3.563390 GCTGAAGTAAATGAGGGAGATGC 59.437 47.826 0.00 0.00 0.00 3.91
1105 1165 1.234615 GGTGCGCAGGCTGAAGTAAA 61.235 55.000 20.86 0.00 40.82 2.01
1127 1187 4.742201 CGGTGTGGAGTGGCCTCG 62.742 72.222 3.32 0.00 38.70 4.63
1154 1214 2.881266 CGGAGAGAGAGCTCGAGCG 61.881 68.421 30.39 10.16 45.98 5.03
1283 1343 0.678950 GATAGGAGAGAGCACCTGGC 59.321 60.000 0.00 0.00 45.30 4.85
1297 1357 2.192263 GAGGGGGATAAGCAGGATAGG 58.808 57.143 0.00 0.00 0.00 2.57
1361 1421 4.077184 GGGTGTGGACGGCGATGA 62.077 66.667 16.62 0.00 0.00 2.92
1363 1423 4.082523 CAGGGTGTGGACGGCGAT 62.083 66.667 16.62 0.00 0.00 4.58
1383 1443 0.178990 AGAAGAAAAGGGCAGCCGTT 60.179 50.000 13.89 13.89 32.63 4.44
1432 1492 2.869503 ATACCTTCTTGGCCGGCGTG 62.870 60.000 22.54 13.04 40.22 5.34
1433 1493 2.666098 ATACCTTCTTGGCCGGCGT 61.666 57.895 22.54 13.38 40.22 5.68
1573 1649 6.657117 TGAAATTTTATTCGACCAGTCCATCA 59.343 34.615 0.00 0.00 31.80 3.07
1593 1669 9.159364 GGAAAAGTTACGGACTAATACTGAAAT 57.841 33.333 0.00 0.00 37.72 2.17
1603 1680 5.916318 TGTGAAAGGAAAAGTTACGGACTA 58.084 37.500 0.00 0.00 37.72 2.59
1635 1712 7.667219 AGCTTCCAAATCCACACATAATATAGG 59.333 37.037 0.00 0.00 0.00 2.57
1636 1713 8.627208 AGCTTCCAAATCCACACATAATATAG 57.373 34.615 0.00 0.00 0.00 1.31
1686 1763 1.342474 TGGGGCCACAGTTTTCTTCAA 60.342 47.619 1.54 0.00 0.00 2.69
1687 1764 0.260230 TGGGGCCACAGTTTTCTTCA 59.740 50.000 1.54 0.00 0.00 3.02
1717 1794 4.037089 GTGGCATACAATCAAGCATCATGA 59.963 41.667 0.00 0.00 0.00 3.07
1730 1807 1.453015 GATGGGGCGTGGCATACAA 60.453 57.895 0.00 0.00 0.00 2.41
1737 1814 2.896854 CATGTCGATGGGGCGTGG 60.897 66.667 0.00 0.00 0.00 4.94
1837 1914 2.159254 CCAAATTGTAGACATTGGGGCG 60.159 50.000 7.02 0.00 38.89 6.13
2032 2110 7.602644 TGCCTTGCTTATATAGTTACAGTATGC 59.397 37.037 0.00 0.00 42.53 3.14
2643 2829 9.751542 AATAATAGATTCCTCTACAACAAGACG 57.248 33.333 0.00 0.00 36.81 4.18
2680 2872 3.700038 TGGTTAAATTTTGACCGGTGTGT 59.300 39.130 14.63 0.00 36.22 3.72
2834 3026 6.610425 AGGTGTACAATAACTAGAACCTAGGG 59.390 42.308 14.81 0.00 35.06 3.53
3079 3273 0.038744 AAGTACTTCCGGACGGAGGA 59.961 55.000 26.43 9.94 46.06 3.71
3215 3706 1.688735 GTCATCGTCATCATCCTGGGA 59.311 52.381 0.00 0.00 0.00 4.37
3262 3753 1.352352 CTCCTCCCCAGCTTCTTGAAA 59.648 52.381 0.00 0.00 0.00 2.69
3275 3766 3.917300 TCAGGTTCTATCTTCTCCTCCC 58.083 50.000 0.00 0.00 0.00 4.30
3403 3897 1.338579 GGCCAGAGTTCTCACAAGAGG 60.339 57.143 0.00 0.00 42.34 3.69
3446 3941 8.682710 ACATAAAAGAACTTTACTGCTTCAACA 58.317 29.630 0.14 0.00 32.26 3.33
3530 4026 8.680903 CATAGCTTAGATGGTTCAACAGAATTT 58.319 33.333 0.00 0.00 0.00 1.82
3537 4033 8.894768 ATAGTTCATAGCTTAGATGGTTCAAC 57.105 34.615 0.00 0.00 0.00 3.18
3644 4140 6.941857 TGACTAGTAACAATCAATGCTGGTA 58.058 36.000 0.00 0.00 0.00 3.25
3777 4276 2.824041 GTCGTTGCCGCCATGGAT 60.824 61.111 18.40 0.00 42.00 3.41
3778 4277 3.620419 ATGTCGTTGCCGCCATGGA 62.620 57.895 18.40 0.00 42.00 3.41
3779 4278 3.112126 GATGTCGTTGCCGCCATGG 62.112 63.158 7.63 7.63 31.97 3.66
3906 4407 4.627611 TGAAGCAAAGCAGCATAGATTC 57.372 40.909 0.00 0.00 36.85 2.52
3958 4459 9.740239 CTTAATTAACTGCTGCACATAATGAAT 57.260 29.630 13.05 4.37 0.00 2.57
3962 4463 6.322201 AGGCTTAATTAACTGCTGCACATAAT 59.678 34.615 0.00 3.88 0.00 1.28
4053 4556 5.629079 AAACTTTATGTCAAGCCTGCTAC 57.371 39.130 0.00 0.00 0.00 3.58
4112 4616 4.568072 TTTGTCCACCATGCTACTACAT 57.432 40.909 0.00 0.00 0.00 2.29
4134 4638 4.644234 TGAAGCCAAGATCTGTTTTTGACA 59.356 37.500 0.00 0.00 36.65 3.58
4139 4643 5.859205 ACTTTGAAGCCAAGATCTGTTTT 57.141 34.783 0.00 0.00 33.23 2.43
4298 4802 5.701290 AGAGGACGAAAATTACTTTCACAGG 59.299 40.000 0.00 0.00 43.22 4.00
4543 5051 4.846779 AAGCATTTCCTAAGCAACGAAA 57.153 36.364 0.00 0.00 0.00 3.46
4600 5108 5.594926 CCATTCCTGCATAAATGAAAGGAC 58.405 41.667 18.08 0.00 40.02 3.85
4722 5231 8.999431 TGTTTCCTGTAACTTCTTTTGCTATAG 58.001 33.333 0.00 0.00 0.00 1.31
4855 5366 1.206132 TCCGCACGATAACTGGACAAT 59.794 47.619 0.00 0.00 0.00 2.71
5302 5977 2.354503 CCATCATCGAATAGCCCTCCTG 60.355 54.545 0.00 0.00 0.00 3.86
5303 5978 1.905215 CCATCATCGAATAGCCCTCCT 59.095 52.381 0.00 0.00 0.00 3.69
5313 5988 3.904800 TTTCTACCAGCCATCATCGAA 57.095 42.857 0.00 0.00 0.00 3.71
5339 6016 6.888632 AGCCTTTCTGATCAATTGTTAGACAT 59.111 34.615 5.13 0.00 0.00 3.06
5398 6076 3.380637 ACCGACTATCTGACAGCGTATTT 59.619 43.478 0.00 0.00 0.00 1.40
5447 6125 6.353404 GGATTTCTTTCCCAACCAACAATA 57.647 37.500 0.00 0.00 0.00 1.90
5488 6166 1.384222 GGCTACAATGGGCCTTTCCG 61.384 60.000 4.53 0.00 44.48 4.30
5501 6179 2.445682 AACAGTTTGTTGGGGCTACA 57.554 45.000 0.00 0.00 39.45 2.74
5603 6281 1.831736 CCCTTTCCTGACCGACATAGT 59.168 52.381 0.00 0.00 0.00 2.12
5719 6397 0.105760 ACTGCATCCCCAACAACCAA 60.106 50.000 0.00 0.00 0.00 3.67
5755 6433 4.640364 TGACTTTGCATCATATATCGCCA 58.360 39.130 0.00 0.00 0.00 5.69
5756 6434 4.931601 TCTGACTTTGCATCATATATCGCC 59.068 41.667 0.00 0.00 0.00 5.54
5757 6435 5.163913 GGTCTGACTTTGCATCATATATCGC 60.164 44.000 7.85 0.00 0.00 4.58
5758 6436 5.349817 GGGTCTGACTTTGCATCATATATCG 59.650 44.000 7.85 0.00 0.00 2.92
5759 6437 6.233434 TGGGTCTGACTTTGCATCATATATC 58.767 40.000 7.85 0.00 0.00 1.63
5760 6438 6.191657 TGGGTCTGACTTTGCATCATATAT 57.808 37.500 7.85 0.00 0.00 0.86
5761 6439 5.628797 TGGGTCTGACTTTGCATCATATA 57.371 39.130 7.85 0.00 0.00 0.86
5762 6440 4.508551 TGGGTCTGACTTTGCATCATAT 57.491 40.909 7.85 0.00 0.00 1.78
5763 6441 3.998913 TGGGTCTGACTTTGCATCATA 57.001 42.857 7.85 0.00 0.00 2.15
5764 6442 2.885135 TGGGTCTGACTTTGCATCAT 57.115 45.000 7.85 0.00 0.00 2.45
5765 6443 2.040145 TGATGGGTCTGACTTTGCATCA 59.960 45.455 7.85 0.00 0.00 3.07
5766 6444 2.715046 TGATGGGTCTGACTTTGCATC 58.285 47.619 7.85 0.00 0.00 3.91
5767 6445 2.821969 GTTGATGGGTCTGACTTTGCAT 59.178 45.455 7.85 0.00 0.00 3.96
5768 6446 2.229792 GTTGATGGGTCTGACTTTGCA 58.770 47.619 7.85 0.00 0.00 4.08
5769 6447 2.229792 TGTTGATGGGTCTGACTTTGC 58.770 47.619 7.85 0.00 0.00 3.68
5770 6448 5.458041 AAATGTTGATGGGTCTGACTTTG 57.542 39.130 7.85 0.00 0.00 2.77
5771 6449 5.363580 ACAAAATGTTGATGGGTCTGACTTT 59.636 36.000 1.62 0.00 38.20 2.66
5772 6450 4.895297 ACAAAATGTTGATGGGTCTGACTT 59.105 37.500 1.62 0.00 38.20 3.01
5773 6451 4.473444 ACAAAATGTTGATGGGTCTGACT 58.527 39.130 1.62 0.00 38.20 3.41
5774 6452 4.853924 ACAAAATGTTGATGGGTCTGAC 57.146 40.909 1.62 0.00 38.20 3.51
5775 6453 5.380900 TGTACAAAATGTTGATGGGTCTGA 58.619 37.500 1.62 0.00 38.20 3.27
5776 6454 5.473162 TCTGTACAAAATGTTGATGGGTCTG 59.527 40.000 1.62 0.00 38.20 3.51
5777 6455 5.630121 TCTGTACAAAATGTTGATGGGTCT 58.370 37.500 1.62 0.00 38.20 3.85
5778 6456 5.957842 TCTGTACAAAATGTTGATGGGTC 57.042 39.130 1.62 0.00 38.20 4.46
5779 6457 6.916360 AATCTGTACAAAATGTTGATGGGT 57.084 33.333 1.62 0.00 38.20 4.51
5780 6458 6.091169 GCAAATCTGTACAAAATGTTGATGGG 59.909 38.462 1.62 0.00 38.20 4.00
5781 6459 6.869913 AGCAAATCTGTACAAAATGTTGATGG 59.130 34.615 1.62 0.00 38.20 3.51
5782 6460 7.878477 AGCAAATCTGTACAAAATGTTGATG 57.122 32.000 1.62 0.00 38.20 3.07
5783 6461 9.979578 TTTAGCAAATCTGTACAAAATGTTGAT 57.020 25.926 1.62 0.00 38.20 2.57
5784 6462 9.809096 TTTTAGCAAATCTGTACAAAATGTTGA 57.191 25.926 1.62 0.00 38.20 3.18
5812 6490 9.118300 GATTGGAAAGTTAGATGTGAGATGAAT 57.882 33.333 0.00 0.00 0.00 2.57
5813 6491 8.102676 TGATTGGAAAGTTAGATGTGAGATGAA 58.897 33.333 0.00 0.00 0.00 2.57
5814 6492 7.550551 GTGATTGGAAAGTTAGATGTGAGATGA 59.449 37.037 0.00 0.00 0.00 2.92
5815 6493 7.335171 TGTGATTGGAAAGTTAGATGTGAGATG 59.665 37.037 0.00 0.00 0.00 2.90
5816 6494 7.397221 TGTGATTGGAAAGTTAGATGTGAGAT 58.603 34.615 0.00 0.00 0.00 2.75
5817 6495 6.768483 TGTGATTGGAAAGTTAGATGTGAGA 58.232 36.000 0.00 0.00 0.00 3.27
5818 6496 7.335171 TCATGTGATTGGAAAGTTAGATGTGAG 59.665 37.037 0.00 0.00 0.00 3.51
5819 6497 7.167535 TCATGTGATTGGAAAGTTAGATGTGA 58.832 34.615 0.00 0.00 0.00 3.58
5820 6498 7.381766 TCATGTGATTGGAAAGTTAGATGTG 57.618 36.000 0.00 0.00 0.00 3.21
5821 6499 8.585471 AATCATGTGATTGGAAAGTTAGATGT 57.415 30.769 7.41 0.00 42.66 3.06
5824 6502 9.958180 TCTAAATCATGTGATTGGAAAGTTAGA 57.042 29.630 8.86 7.66 43.41 2.10
5825 6503 9.994432 GTCTAAATCATGTGATTGGAAAGTTAG 57.006 33.333 8.86 5.76 43.41 2.34
5826 6504 9.513906 TGTCTAAATCATGTGATTGGAAAGTTA 57.486 29.630 8.86 0.00 43.41 2.24
5827 6505 8.408043 TGTCTAAATCATGTGATTGGAAAGTT 57.592 30.769 8.86 0.00 43.41 2.66
5828 6506 8.299570 GTTGTCTAAATCATGTGATTGGAAAGT 58.700 33.333 8.86 0.00 43.41 2.66
5829 6507 8.298854 TGTTGTCTAAATCATGTGATTGGAAAG 58.701 33.333 8.86 5.52 43.41 2.62
5830 6508 8.175925 TGTTGTCTAAATCATGTGATTGGAAA 57.824 30.769 8.86 4.07 43.41 3.13
5831 6509 7.757941 TGTTGTCTAAATCATGTGATTGGAA 57.242 32.000 8.86 0.00 43.41 3.53
5832 6510 7.665145 TCTTGTTGTCTAAATCATGTGATTGGA 59.335 33.333 8.86 7.91 43.41 3.53
5833 6511 7.819644 TCTTGTTGTCTAAATCATGTGATTGG 58.180 34.615 8.86 5.99 43.41 3.16
5834 6512 9.850628 AATCTTGTTGTCTAAATCATGTGATTG 57.149 29.630 8.86 0.00 43.41 2.67
5835 6513 9.850628 CAATCTTGTTGTCTAAATCATGTGATT 57.149 29.630 2.48 2.48 45.91 2.57
5836 6514 9.234827 TCAATCTTGTTGTCTAAATCATGTGAT 57.765 29.630 0.00 0.00 36.07 3.06
5837 6515 8.620116 TCAATCTTGTTGTCTAAATCATGTGA 57.380 30.769 0.00 0.00 0.00 3.58
5869 6547 8.983724 CAGGAACAACACTAAACAAAAGAAAAA 58.016 29.630 0.00 0.00 0.00 1.94
5870 6548 8.145122 ACAGGAACAACACTAAACAAAAGAAAA 58.855 29.630 0.00 0.00 0.00 2.29
5871 6549 7.662897 ACAGGAACAACACTAAACAAAAGAAA 58.337 30.769 0.00 0.00 0.00 2.52
5872 6550 7.222000 ACAGGAACAACACTAAACAAAAGAA 57.778 32.000 0.00 0.00 0.00 2.52
5873 6551 6.827586 ACAGGAACAACACTAAACAAAAGA 57.172 33.333 0.00 0.00 0.00 2.52
5874 6552 7.758495 AGTACAGGAACAACACTAAACAAAAG 58.242 34.615 0.00 0.00 0.00 2.27
5875 6553 7.413219 CGAGTACAGGAACAACACTAAACAAAA 60.413 37.037 0.00 0.00 0.00 2.44
5876 6554 6.036300 CGAGTACAGGAACAACACTAAACAAA 59.964 38.462 0.00 0.00 0.00 2.83
5877 6555 5.521010 CGAGTACAGGAACAACACTAAACAA 59.479 40.000 0.00 0.00 0.00 2.83
5878 6556 5.045215 CGAGTACAGGAACAACACTAAACA 58.955 41.667 0.00 0.00 0.00 2.83
5879 6557 5.045872 ACGAGTACAGGAACAACACTAAAC 58.954 41.667 0.00 0.00 0.00 2.01
5880 6558 5.266733 ACGAGTACAGGAACAACACTAAA 57.733 39.130 0.00 0.00 0.00 1.85
5881 6559 4.261741 GGACGAGTACAGGAACAACACTAA 60.262 45.833 0.00 0.00 0.00 2.24
5882 6560 3.254166 GGACGAGTACAGGAACAACACTA 59.746 47.826 0.00 0.00 0.00 2.74
5883 6561 2.035576 GGACGAGTACAGGAACAACACT 59.964 50.000 0.00 0.00 0.00 3.55
5884 6562 2.401351 GGACGAGTACAGGAACAACAC 58.599 52.381 0.00 0.00 0.00 3.32
5885 6563 1.342174 GGGACGAGTACAGGAACAACA 59.658 52.381 0.00 0.00 0.00 3.33
5886 6564 1.617357 AGGGACGAGTACAGGAACAAC 59.383 52.381 0.00 0.00 0.00 3.32
5887 6565 1.891150 GAGGGACGAGTACAGGAACAA 59.109 52.381 0.00 0.00 0.00 2.83
5888 6566 1.542492 GAGGGACGAGTACAGGAACA 58.458 55.000 0.00 0.00 0.00 3.18
5889 6567 0.450983 CGAGGGACGAGTACAGGAAC 59.549 60.000 0.00 0.00 45.77 3.62
5890 6568 1.310933 GCGAGGGACGAGTACAGGAA 61.311 60.000 0.00 0.00 45.77 3.36
5891 6569 1.748122 GCGAGGGACGAGTACAGGA 60.748 63.158 0.00 0.00 45.77 3.86
5892 6570 2.799371 GCGAGGGACGAGTACAGG 59.201 66.667 0.00 0.00 45.77 4.00
5893 6571 2.403987 CGCGAGGGACGAGTACAG 59.596 66.667 0.00 0.00 45.77 2.74
5898 6576 2.585170 CTTCTCACGCGAGGGACGAG 62.585 65.000 15.93 1.00 39.71 4.18
5899 6577 2.670592 TTCTCACGCGAGGGACGA 60.671 61.111 15.93 0.00 39.71 4.20
5900 6578 2.202492 CTTCTCACGCGAGGGACG 60.202 66.667 15.93 3.70 39.71 4.79
5901 6579 2.156051 AACCTTCTCACGCGAGGGAC 62.156 60.000 15.93 0.00 39.71 4.46
5902 6580 1.906824 AACCTTCTCACGCGAGGGA 60.907 57.895 15.93 7.92 44.68 4.20
5903 6581 1.738099 CAACCTTCTCACGCGAGGG 60.738 63.158 15.93 4.48 39.95 4.30
5904 6582 0.242825 TACAACCTTCTCACGCGAGG 59.757 55.000 15.93 11.81 39.95 4.63
5905 6583 2.159366 AGATACAACCTTCTCACGCGAG 60.159 50.000 15.93 4.59 40.98 5.03
5906 6584 1.816835 AGATACAACCTTCTCACGCGA 59.183 47.619 15.93 0.00 0.00 5.87
5907 6585 2.159366 AGAGATACAACCTTCTCACGCG 60.159 50.000 3.53 3.53 40.69 6.01
5908 6586 3.512033 AGAGATACAACCTTCTCACGC 57.488 47.619 3.08 0.00 40.69 5.34
5909 6587 5.220892 GGAGTAGAGATACAACCTTCTCACG 60.221 48.000 3.08 0.00 40.69 4.35
5910 6588 5.889289 AGGAGTAGAGATACAACCTTCTCAC 59.111 44.000 3.08 0.36 40.69 3.51
5911 6589 6.080969 AGGAGTAGAGATACAACCTTCTCA 57.919 41.667 3.08 0.00 40.69 3.27
5912 6590 8.573035 CATTAGGAGTAGAGATACAACCTTCTC 58.427 40.741 0.00 0.00 38.93 2.87
5913 6591 7.507616 CCATTAGGAGTAGAGATACAACCTTCT 59.492 40.741 0.00 0.00 36.89 2.85
5914 6592 7.506261 TCCATTAGGAGTAGAGATACAACCTTC 59.494 40.741 0.00 0.00 39.61 3.46
5915 6593 7.363031 TCCATTAGGAGTAGAGATACAACCTT 58.637 38.462 0.00 0.00 39.61 3.50
5916 6594 6.923670 TCCATTAGGAGTAGAGATACAACCT 58.076 40.000 0.00 0.00 39.61 3.50
5931 6609 2.265367 TCACCAACTGCTCCATTAGGA 58.735 47.619 0.00 0.00 43.21 2.94
5932 6610 2.787473 TCACCAACTGCTCCATTAGG 57.213 50.000 0.00 0.00 0.00 2.69
5933 6611 5.431765 ACTATTCACCAACTGCTCCATTAG 58.568 41.667 0.00 0.00 0.00 1.73
5934 6612 5.189736 AGACTATTCACCAACTGCTCCATTA 59.810 40.000 0.00 0.00 0.00 1.90
5935 6613 4.018960 AGACTATTCACCAACTGCTCCATT 60.019 41.667 0.00 0.00 0.00 3.16
5936 6614 3.521126 AGACTATTCACCAACTGCTCCAT 59.479 43.478 0.00 0.00 0.00 3.41
5937 6615 2.906389 AGACTATTCACCAACTGCTCCA 59.094 45.455 0.00 0.00 0.00 3.86
5938 6616 3.526534 GAGACTATTCACCAACTGCTCC 58.473 50.000 0.00 0.00 0.00 4.70
5939 6617 3.055819 TGGAGACTATTCACCAACTGCTC 60.056 47.826 0.00 0.00 39.34 4.26
5940 6618 2.906389 TGGAGACTATTCACCAACTGCT 59.094 45.455 0.00 0.00 39.34 4.24
5941 6619 3.003480 GTGGAGACTATTCACCAACTGC 58.997 50.000 0.79 0.00 43.35 4.40
5942 6620 3.254060 CGTGGAGACTATTCACCAACTG 58.746 50.000 0.79 0.00 43.35 3.16
5943 6621 2.233922 CCGTGGAGACTATTCACCAACT 59.766 50.000 0.79 0.00 43.35 3.16
5944 6622 2.028385 ACCGTGGAGACTATTCACCAAC 60.028 50.000 0.79 0.00 43.35 3.77
5945 6623 2.253610 ACCGTGGAGACTATTCACCAA 58.746 47.619 0.79 0.00 43.35 3.67
5946 6624 1.933021 ACCGTGGAGACTATTCACCA 58.067 50.000 0.00 0.00 39.94 4.17
5947 6625 3.329929 AAACCGTGGAGACTATTCACC 57.670 47.619 0.00 0.00 33.22 4.02
5948 6626 6.980051 AAATAAACCGTGGAGACTATTCAC 57.020 37.500 0.00 0.00 0.00 3.18
5949 6627 6.311935 CGAAAATAAACCGTGGAGACTATTCA 59.688 38.462 0.00 0.00 0.00 2.57
5950 6628 6.312180 ACGAAAATAAACCGTGGAGACTATTC 59.688 38.462 0.00 0.00 35.02 1.75
5951 6629 6.168389 ACGAAAATAAACCGTGGAGACTATT 58.832 36.000 0.00 0.00 35.02 1.73
5952 6630 5.727434 ACGAAAATAAACCGTGGAGACTAT 58.273 37.500 0.00 0.00 35.02 2.12
5953 6631 5.138125 ACGAAAATAAACCGTGGAGACTA 57.862 39.130 0.00 0.00 35.02 2.59
5954 6632 3.999046 ACGAAAATAAACCGTGGAGACT 58.001 40.909 0.00 0.00 35.02 3.24
5955 6633 4.211794 TCAACGAAAATAAACCGTGGAGAC 59.788 41.667 0.00 0.00 36.58 3.36
5956 6634 4.378774 TCAACGAAAATAAACCGTGGAGA 58.621 39.130 0.00 0.00 36.58 3.71
5957 6635 4.735662 TCAACGAAAATAAACCGTGGAG 57.264 40.909 0.00 0.00 36.58 3.86
5958 6636 5.692613 AATCAACGAAAATAAACCGTGGA 57.307 34.783 0.00 0.00 40.06 4.02
5959 6637 6.757026 AAAATCAACGAAAATAAACCGTGG 57.243 33.333 0.00 0.00 36.58 4.94
5981 6659 1.346722 GGTGGGAGGAGAGACGAAAAA 59.653 52.381 0.00 0.00 0.00 1.94
5982 6660 0.974383 GGTGGGAGGAGAGACGAAAA 59.026 55.000 0.00 0.00 0.00 2.29
5983 6661 0.178944 TGGTGGGAGGAGAGACGAAA 60.179 55.000 0.00 0.00 0.00 3.46
5984 6662 0.898789 GTGGTGGGAGGAGAGACGAA 60.899 60.000 0.00 0.00 0.00 3.85
5985 6663 1.304217 GTGGTGGGAGGAGAGACGA 60.304 63.158 0.00 0.00 0.00 4.20
5986 6664 2.352032 GGTGGTGGGAGGAGAGACG 61.352 68.421 0.00 0.00 0.00 4.18
5987 6665 1.990614 GGGTGGTGGGAGGAGAGAC 60.991 68.421 0.00 0.00 0.00 3.36
5988 6666 2.450243 GGGTGGTGGGAGGAGAGA 59.550 66.667 0.00 0.00 0.00 3.10
5989 6667 2.689034 GGGGTGGTGGGAGGAGAG 60.689 72.222 0.00 0.00 0.00 3.20
5990 6668 4.348495 GGGGGTGGTGGGAGGAGA 62.348 72.222 0.00 0.00 0.00 3.71
5991 6669 4.354943 AGGGGGTGGTGGGAGGAG 62.355 72.222 0.00 0.00 0.00 3.69
5992 6670 4.348495 GAGGGGGTGGTGGGAGGA 62.348 72.222 0.00 0.00 0.00 3.71
5997 6675 3.420482 GATGGGAGGGGGTGGTGG 61.420 72.222 0.00 0.00 0.00 4.61
5998 6676 3.420482 GGATGGGAGGGGGTGGTG 61.420 72.222 0.00 0.00 0.00 4.17
5999 6677 3.637544 AGGATGGGAGGGGGTGGT 61.638 66.667 0.00 0.00 0.00 4.16
6000 6678 3.099170 CAGGATGGGAGGGGGTGG 61.099 72.222 0.00 0.00 0.00 4.61
6011 6689 8.408601 AGAAAAATAAATCGATGAACCAGGATG 58.591 33.333 0.00 0.00 0.00 3.51
6012 6690 8.525290 AGAAAAATAAATCGATGAACCAGGAT 57.475 30.769 0.00 0.00 0.00 3.24
6013 6691 7.829211 AGAGAAAAATAAATCGATGAACCAGGA 59.171 33.333 0.00 0.00 0.00 3.86
6014 6692 7.989826 AGAGAAAAATAAATCGATGAACCAGG 58.010 34.615 0.00 0.00 0.00 4.45
6015 6693 8.125448 GGAGAGAAAAATAAATCGATGAACCAG 58.875 37.037 0.00 0.00 0.00 4.00
6016 6694 7.609918 TGGAGAGAAAAATAAATCGATGAACCA 59.390 33.333 0.00 0.00 0.00 3.67
6017 6695 7.910683 GTGGAGAGAAAAATAAATCGATGAACC 59.089 37.037 0.00 0.00 0.00 3.62
6018 6696 8.669243 AGTGGAGAGAAAAATAAATCGATGAAC 58.331 33.333 0.00 0.00 0.00 3.18
6019 6697 8.792830 AGTGGAGAGAAAAATAAATCGATGAA 57.207 30.769 0.00 0.00 0.00 2.57
6020 6698 8.260818 AGAGTGGAGAGAAAAATAAATCGATGA 58.739 33.333 0.00 0.00 0.00 2.92
6021 6699 8.430801 AGAGTGGAGAGAAAAATAAATCGATG 57.569 34.615 0.00 0.00 0.00 3.84
6022 6700 9.454859 AAAGAGTGGAGAGAAAAATAAATCGAT 57.545 29.630 0.00 0.00 0.00 3.59
6023 6701 8.848474 AAAGAGTGGAGAGAAAAATAAATCGA 57.152 30.769 0.00 0.00 0.00 3.59
6031 6709 9.063615 GGTTGTAATAAAGAGTGGAGAGAAAAA 57.936 33.333 0.00 0.00 0.00 1.94
6032 6710 8.215050 TGGTTGTAATAAAGAGTGGAGAGAAAA 58.785 33.333 0.00 0.00 0.00 2.29
6033 6711 7.741785 TGGTTGTAATAAAGAGTGGAGAGAAA 58.258 34.615 0.00 0.00 0.00 2.52
6034 6712 7.234782 TCTGGTTGTAATAAAGAGTGGAGAGAA 59.765 37.037 0.00 0.00 0.00 2.87
6035 6713 6.724441 TCTGGTTGTAATAAAGAGTGGAGAGA 59.276 38.462 0.00 0.00 0.00 3.10
6036 6714 6.936279 TCTGGTTGTAATAAAGAGTGGAGAG 58.064 40.000 0.00 0.00 0.00 3.20
6037 6715 6.928348 TCTGGTTGTAATAAAGAGTGGAGA 57.072 37.500 0.00 0.00 0.00 3.71
6038 6716 7.162082 AGTTCTGGTTGTAATAAAGAGTGGAG 58.838 38.462 0.00 0.00 0.00 3.86
6039 6717 7.074653 AGTTCTGGTTGTAATAAAGAGTGGA 57.925 36.000 0.00 0.00 0.00 4.02
6040 6718 7.745620 AAGTTCTGGTTGTAATAAAGAGTGG 57.254 36.000 0.00 0.00 0.00 4.00
6041 6719 8.290325 GGAAAGTTCTGGTTGTAATAAAGAGTG 58.710 37.037 0.00 0.00 0.00 3.51
6042 6720 8.218488 AGGAAAGTTCTGGTTGTAATAAAGAGT 58.782 33.333 0.00 0.00 0.00 3.24
6043 6721 8.622948 AGGAAAGTTCTGGTTGTAATAAAGAG 57.377 34.615 0.00 0.00 0.00 2.85
6046 6724 9.629878 TGTTAGGAAAGTTCTGGTTGTAATAAA 57.370 29.630 0.00 0.00 0.00 1.40
6047 6725 9.802039 ATGTTAGGAAAGTTCTGGTTGTAATAA 57.198 29.630 0.00 0.00 0.00 1.40
6049 6727 9.975218 ATATGTTAGGAAAGTTCTGGTTGTAAT 57.025 29.630 0.00 0.00 0.00 1.89
6052 6730 9.227777 GTTATATGTTAGGAAAGTTCTGGTTGT 57.772 33.333 0.00 0.00 0.00 3.32
6053 6731 9.226606 TGTTATATGTTAGGAAAGTTCTGGTTG 57.773 33.333 0.00 0.00 0.00 3.77
6054 6732 9.802039 TTGTTATATGTTAGGAAAGTTCTGGTT 57.198 29.630 0.00 0.00 0.00 3.67
6055 6733 9.802039 TTTGTTATATGTTAGGAAAGTTCTGGT 57.198 29.630 0.00 0.00 0.00 4.00
6061 6739 8.889717 CCGTGATTTGTTATATGTTAGGAAAGT 58.110 33.333 0.00 0.00 0.00 2.66
6062 6740 9.104965 TCCGTGATTTGTTATATGTTAGGAAAG 57.895 33.333 0.00 0.00 0.00 2.62
6063 6741 9.621629 ATCCGTGATTTGTTATATGTTAGGAAA 57.378 29.630 0.00 0.00 0.00 3.13
6064 6742 9.268268 GATCCGTGATTTGTTATATGTTAGGAA 57.732 33.333 0.00 0.00 0.00 3.36
6065 6743 8.647796 AGATCCGTGATTTGTTATATGTTAGGA 58.352 33.333 0.00 0.00 0.00 2.94
6066 6744 8.833231 AGATCCGTGATTTGTTATATGTTAGG 57.167 34.615 0.00 0.00 0.00 2.69
6069 6747 9.832445 AGTTAGATCCGTGATTTGTTATATGTT 57.168 29.630 0.00 0.00 0.00 2.71
6070 6748 9.832445 AAGTTAGATCCGTGATTTGTTATATGT 57.168 29.630 0.00 0.00 0.00 2.29
6072 6750 9.490379 GGAAGTTAGATCCGTGATTTGTTATAT 57.510 33.333 0.00 0.00 0.00 0.86
6073 6751 8.701895 AGGAAGTTAGATCCGTGATTTGTTATA 58.298 33.333 0.00 0.00 42.03 0.98
6074 6752 7.565680 AGGAAGTTAGATCCGTGATTTGTTAT 58.434 34.615 0.00 0.00 42.03 1.89
6075 6753 6.942976 AGGAAGTTAGATCCGTGATTTGTTA 58.057 36.000 0.00 0.00 42.03 2.41
6076 6754 5.805728 AGGAAGTTAGATCCGTGATTTGTT 58.194 37.500 0.00 0.00 42.03 2.83
6077 6755 5.422214 AGGAAGTTAGATCCGTGATTTGT 57.578 39.130 0.00 0.00 42.03 2.83
6078 6756 7.843490 TTAAGGAAGTTAGATCCGTGATTTG 57.157 36.000 0.00 0.00 42.03 2.32
6079 6757 9.462606 AATTTAAGGAAGTTAGATCCGTGATTT 57.537 29.630 0.00 0.00 42.03 2.17
6108 6786 9.573166 ACCAATAAAAGGAATCGATTGATATGA 57.427 29.630 16.96 0.00 33.40 2.15
6111 6789 9.402320 TGAACCAATAAAAGGAATCGATTGATA 57.598 29.630 16.96 1.75 33.40 2.15
6112 6790 8.292444 TGAACCAATAAAAGGAATCGATTGAT 57.708 30.769 16.96 0.06 35.98 2.57
6113 6791 7.695480 TGAACCAATAAAAGGAATCGATTGA 57.305 32.000 16.96 0.00 30.62 2.57
6114 6792 8.931385 ATTGAACCAATAAAAGGAATCGATTG 57.069 30.769 16.96 0.00 31.77 2.67
6115 6793 9.942850 AAATTGAACCAATAAAAGGAATCGATT 57.057 25.926 11.20 11.20 32.43 3.34
6116 6794 9.369904 CAAATTGAACCAATAAAAGGAATCGAT 57.630 29.630 0.00 0.00 32.43 3.59
6117 6795 8.364142 ACAAATTGAACCAATAAAAGGAATCGA 58.636 29.630 0.00 0.00 32.43 3.59
6118 6796 8.532977 ACAAATTGAACCAATAAAAGGAATCG 57.467 30.769 0.00 0.00 32.43 3.34
6119 6797 9.710900 AGACAAATTGAACCAATAAAAGGAATC 57.289 29.630 0.00 0.00 32.43 2.52
6122 6800 9.974980 GTAAGACAAATTGAACCAATAAAAGGA 57.025 29.630 0.00 0.00 32.43 3.36
6123 6801 8.911662 CGTAAGACAAATTGAACCAATAAAAGG 58.088 33.333 0.00 0.00 43.02 3.11
6124 6802 9.672086 TCGTAAGACAAATTGAACCAATAAAAG 57.328 29.630 0.00 0.00 45.01 2.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.