Multiple sequence alignment - TraesCS5B01G337800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G337800 chr5B 100.000 3654 0 0 1 3654 521155718 521152065 0.000000e+00 6748.0
1 TraesCS5B01G337800 chr5B 86.657 1334 131 28 857 2159 521162538 521161221 0.000000e+00 1434.0
2 TraesCS5B01G337800 chr5B 84.851 1241 158 16 1046 2262 521161171 521159937 0.000000e+00 1223.0
3 TraesCS5B01G337800 chr5B 89.862 217 22 0 1 217 236296037 236296253 2.780000e-71 279.0
4 TraesCS5B01G337800 chr5D 89.495 1723 137 22 217 1912 431610709 431609004 0.000000e+00 2139.0
5 TraesCS5B01G337800 chr5D 88.828 1092 99 11 1087 2159 431619089 431618002 0.000000e+00 1319.0
6 TraesCS5B01G337800 chr5D 85.173 1241 154 16 1046 2262 431617951 431616717 0.000000e+00 1245.0
7 TraesCS5B01G337800 chr5D 79.114 790 86 27 2283 3044 431608866 431608128 4.270000e-129 472.0
8 TraesCS5B01G337800 chr5D 82.251 462 29 20 3209 3652 431608126 431607700 2.090000e-92 350.0
9 TraesCS5B01G337800 chr5D 75.837 418 71 22 2637 3042 431615470 431615071 6.230000e-43 185.0
10 TraesCS5B01G337800 chr5A 95.120 1004 49 0 1266 2269 546968346 546969349 0.000000e+00 1583.0
11 TraesCS5B01G337800 chr5A 86.059 1327 132 32 858 2159 546704891 546703593 0.000000e+00 1376.0
12 TraesCS5B01G337800 chr5A 85.924 1229 142 17 1076 2281 546893380 546894600 0.000000e+00 1282.0
13 TraesCS5B01G337800 chr5A 84.367 1241 164 16 1046 2262 546703542 546702308 0.000000e+00 1190.0
14 TraesCS5B01G337800 chr5A 87.558 868 69 14 217 1075 546900071 546900908 0.000000e+00 968.0
15 TraesCS5B01G337800 chr5A 87.734 693 37 22 626 1275 546698638 546697951 0.000000e+00 765.0
16 TraesCS5B01G337800 chr5A 87.905 463 33 9 3205 3652 546696963 546696509 1.160000e-144 523.0
17 TraesCS5B01G337800 chr5A 90.520 327 25 4 3327 3652 546970701 546971022 9.380000e-116 427.0
18 TraesCS5B01G337800 chr5A 79.521 459 62 17 3209 3652 546700949 546700508 7.670000e-77 298.0
19 TraesCS5B01G337800 chr5A 95.531 179 6 2 3031 3209 362179192 362179016 5.970000e-73 285.0
20 TraesCS5B01G337800 chr5A 90.278 216 21 0 2 217 590998548 590998763 2.150000e-72 283.0
21 TraesCS5B01G337800 chr5A 90.278 216 21 0 2 217 698218938 698219153 2.150000e-72 283.0
22 TraesCS5B01G337800 chr5A 81.003 379 50 16 3279 3652 546895935 546896296 7.730000e-72 281.0
23 TraesCS5B01G337800 chr5A 88.938 226 14 6 2283 2500 546697521 546697299 6.010000e-68 268.0
24 TraesCS5B01G337800 chr5A 87.615 218 12 6 2283 2500 546969899 546970101 4.720000e-59 239.0
25 TraesCS5B01G337800 chr5A 74.882 422 74 25 2634 3042 546895485 546895887 2.920000e-36 163.0
26 TraesCS5B01G337800 chr5A 90.164 122 12 0 2919 3040 546697086 546696965 3.780000e-35 159.0
27 TraesCS5B01G337800 chr5A 96.491 57 2 0 1207 1263 546966581 546966637 1.080000e-15 95.3
28 TraesCS5B01G337800 chr7B 91.244 217 19 0 1 217 328829200 328829416 2.760000e-76 296.0
29 TraesCS5B01G337800 chr7B 90.783 217 20 0 1 217 348232129 348231913 1.280000e-74 291.0
30 TraesCS5B01G337800 chr2D 97.661 171 4 0 3040 3210 309971586 309971416 9.920000e-76 294.0
31 TraesCS5B01G337800 chr3D 90.783 217 20 0 1 217 39188155 39188371 1.280000e-74 291.0
32 TraesCS5B01G337800 chr3D 95.109 184 6 3 3035 3216 360695820 360696002 1.660000e-73 287.0
33 TraesCS5B01G337800 chr6D 97.619 168 4 0 3040 3207 392896972 392897139 4.620000e-74 289.0
34 TraesCS5B01G337800 chr1D 97.076 171 5 0 3040 3210 121437160 121437330 4.620000e-74 289.0
35 TraesCS5B01G337800 chr1B 96.552 174 5 1 3041 3214 586298553 586298725 1.660000e-73 287.0
36 TraesCS5B01G337800 chr7D 90.610 213 20 0 5 217 226706129 226705917 2.150000e-72 283.0
37 TraesCS5B01G337800 chr7D 90.141 213 21 0 5 217 564105312 564105100 9.990000e-71 278.0
38 TraesCS5B01G337800 chr4B 96.000 175 6 1 3036 3210 80990819 80990646 2.150000e-72 283.0
39 TraesCS5B01G337800 chr2B 95.954 173 7 0 3036 3208 342280772 342280944 7.730000e-72 281.0
40 TraesCS5B01G337800 chr6B 89.862 217 22 0 1 217 269936754 269936538 2.780000e-71 279.0
41 TraesCS5B01G337800 chr1A 94.086 186 8 3 3030 3214 72780709 72780892 2.780000e-71 279.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G337800 chr5B 521152065 521155718 3653 True 6748.000000 6748 100.000000 1 3654 1 chr5B.!!$R1 3653
1 TraesCS5B01G337800 chr5B 521159937 521162538 2601 True 1328.500000 1434 85.754000 857 2262 2 chr5B.!!$R2 1405
2 TraesCS5B01G337800 chr5D 431607700 431610709 3009 True 987.000000 2139 83.620000 217 3652 3 chr5D.!!$R1 3435
3 TraesCS5B01G337800 chr5D 431615071 431619089 4018 True 916.333333 1319 83.279333 1046 3042 3 chr5D.!!$R2 1996
4 TraesCS5B01G337800 chr5A 546893380 546900908 7528 False 673.500000 1282 82.341750 217 3652 4 chr5A.!!$F3 3435
5 TraesCS5B01G337800 chr5A 546696509 546704891 8382 True 654.142857 1376 86.384000 626 3652 7 chr5A.!!$R2 3026
6 TraesCS5B01G337800 chr5A 546966581 546971022 4441 False 586.075000 1583 92.436500 1207 3652 4 chr5A.!!$F4 2445

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
935 943 0.107165 GGCCCAATTAGAGACGCCTT 60.107 55.0 0.0 0.0 33.5 4.35 F
951 959 0.108138 CCTTGACGGCTAGAACCAGG 60.108 60.0 0.0 0.0 0.0 4.45 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2524 11789 0.032540 CAGTTCAGGCAAAAGGGCAC 59.967 55.0 0.00 0.0 46.44 5.01 R
2798 12138 0.366871 CGCGATAGTGTCACTTGCAC 59.633 55.0 11.54 0.0 42.91 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 4.314740 TGCATAACAAGGACCACAAAAC 57.685 40.909 0.00 0.00 0.00 2.43
22 23 3.243234 TGCATAACAAGGACCACAAAACG 60.243 43.478 0.00 0.00 0.00 3.60
23 24 3.305110 CATAACAAGGACCACAAAACGC 58.695 45.455 0.00 0.00 0.00 4.84
24 25 1.178276 AACAAGGACCACAAAACGCA 58.822 45.000 0.00 0.00 0.00 5.24
25 26 1.178276 ACAAGGACCACAAAACGCAA 58.822 45.000 0.00 0.00 0.00 4.85
26 27 1.546476 ACAAGGACCACAAAACGCAAA 59.454 42.857 0.00 0.00 0.00 3.68
27 28 2.167487 ACAAGGACCACAAAACGCAAAT 59.833 40.909 0.00 0.00 0.00 2.32
28 29 3.381908 ACAAGGACCACAAAACGCAAATA 59.618 39.130 0.00 0.00 0.00 1.40
29 30 4.142138 ACAAGGACCACAAAACGCAAATAA 60.142 37.500 0.00 0.00 0.00 1.40
30 31 4.657436 AGGACCACAAAACGCAAATAAA 57.343 36.364 0.00 0.00 0.00 1.40
31 32 4.364860 AGGACCACAAAACGCAAATAAAC 58.635 39.130 0.00 0.00 0.00 2.01
32 33 4.113354 GGACCACAAAACGCAAATAAACA 58.887 39.130 0.00 0.00 0.00 2.83
33 34 4.747605 GGACCACAAAACGCAAATAAACAT 59.252 37.500 0.00 0.00 0.00 2.71
34 35 5.921408 GGACCACAAAACGCAAATAAACATA 59.079 36.000 0.00 0.00 0.00 2.29
35 36 6.088883 GGACCACAAAACGCAAATAAACATAG 59.911 38.462 0.00 0.00 0.00 2.23
36 37 6.508777 ACCACAAAACGCAAATAAACATAGT 58.491 32.000 0.00 0.00 0.00 2.12
37 38 6.981559 ACCACAAAACGCAAATAAACATAGTT 59.018 30.769 0.00 0.00 0.00 2.24
38 39 7.492994 ACCACAAAACGCAAATAAACATAGTTT 59.507 29.630 0.51 0.51 32.58 2.66
39 40 8.331742 CCACAAAACGCAAATAAACATAGTTTT 58.668 29.630 0.03 0.00 39.80 2.43
40 41 9.695884 CACAAAACGCAAATAAACATAGTTTTT 57.304 25.926 0.03 0.00 37.97 1.94
41 42 9.695884 ACAAAACGCAAATAAACATAGTTTTTG 57.304 25.926 0.03 0.00 37.97 2.44
42 43 8.668934 CAAAACGCAAATAAACATAGTTTTTGC 58.331 29.630 16.28 16.28 45.28 3.68
48 49 9.662545 GCAAATAAACATAGTTTTTGCAAACAT 57.337 25.926 12.39 3.28 46.96 2.71
53 54 7.406799 AACATAGTTTTTGCAAACATAGTGC 57.593 32.000 12.39 0.00 44.32 4.40
54 55 6.748132 ACATAGTTTTTGCAAACATAGTGCT 58.252 32.000 12.39 1.07 44.32 4.40
55 56 7.881142 ACATAGTTTTTGCAAACATAGTGCTA 58.119 30.769 12.39 3.39 44.32 3.49
56 57 8.522830 ACATAGTTTTTGCAAACATAGTGCTAT 58.477 29.630 12.39 5.59 44.32 2.97
57 58 8.800972 CATAGTTTTTGCAAACATAGTGCTATG 58.199 33.333 12.39 13.34 44.32 2.23
58 59 6.980593 AGTTTTTGCAAACATAGTGCTATGA 58.019 32.000 21.81 0.91 44.32 2.15
59 60 7.432869 AGTTTTTGCAAACATAGTGCTATGAA 58.567 30.769 21.81 6.29 44.32 2.57
60 61 8.090214 AGTTTTTGCAAACATAGTGCTATGAAT 58.910 29.630 21.81 10.10 44.32 2.57
61 62 9.352784 GTTTTTGCAAACATAGTGCTATGAATA 57.647 29.630 21.81 2.74 44.22 1.75
62 63 9.571810 TTTTTGCAAACATAGTGCTATGAATAG 57.428 29.630 21.81 11.48 44.22 1.73
63 64 6.866010 TGCAAACATAGTGCTATGAATAGG 57.134 37.500 21.81 9.92 44.22 2.57
64 65 6.356556 TGCAAACATAGTGCTATGAATAGGT 58.643 36.000 21.81 0.29 44.22 3.08
65 66 6.483307 TGCAAACATAGTGCTATGAATAGGTC 59.517 38.462 21.81 7.81 44.22 3.85
66 67 6.073003 GCAAACATAGTGCTATGAATAGGTCC 60.073 42.308 21.81 0.00 44.22 4.46
67 68 5.392767 ACATAGTGCTATGAATAGGTCCG 57.607 43.478 21.81 0.00 44.22 4.79
68 69 5.077564 ACATAGTGCTATGAATAGGTCCGA 58.922 41.667 21.81 0.00 44.22 4.55
69 70 5.717178 ACATAGTGCTATGAATAGGTCCGAT 59.283 40.000 21.81 0.00 44.22 4.18
70 71 6.211584 ACATAGTGCTATGAATAGGTCCGATT 59.788 38.462 21.81 0.00 44.22 3.34
71 72 5.552870 AGTGCTATGAATAGGTCCGATTT 57.447 39.130 0.00 0.00 0.00 2.17
72 73 6.665992 AGTGCTATGAATAGGTCCGATTTA 57.334 37.500 0.00 0.00 0.00 1.40
73 74 7.246171 AGTGCTATGAATAGGTCCGATTTAT 57.754 36.000 7.09 7.09 0.00 1.40
74 75 7.324178 AGTGCTATGAATAGGTCCGATTTATC 58.676 38.462 5.42 0.00 0.00 1.75
75 76 7.179338 AGTGCTATGAATAGGTCCGATTTATCT 59.821 37.037 5.42 0.00 0.00 1.98
76 77 7.276658 GTGCTATGAATAGGTCCGATTTATCTG 59.723 40.741 5.42 2.94 0.00 2.90
77 78 7.039011 TGCTATGAATAGGTCCGATTTATCTGT 60.039 37.037 5.42 0.00 0.00 3.41
78 79 8.467598 GCTATGAATAGGTCCGATTTATCTGTA 58.532 37.037 5.42 0.00 0.00 2.74
79 80 9.790389 CTATGAATAGGTCCGATTTATCTGTAC 57.210 37.037 5.42 0.00 0.00 2.90
80 81 7.591421 TGAATAGGTCCGATTTATCTGTACA 57.409 36.000 0.00 0.00 0.00 2.90
81 82 8.190326 TGAATAGGTCCGATTTATCTGTACAT 57.810 34.615 0.00 0.00 0.00 2.29
82 83 8.647796 TGAATAGGTCCGATTTATCTGTACATT 58.352 33.333 0.00 0.00 0.00 2.71
83 84 9.141400 GAATAGGTCCGATTTATCTGTACATTC 57.859 37.037 0.00 0.00 0.00 2.67
84 85 6.732896 AGGTCCGATTTATCTGTACATTCT 57.267 37.500 0.00 0.00 0.00 2.40
85 86 6.750148 AGGTCCGATTTATCTGTACATTCTC 58.250 40.000 0.00 0.00 0.00 2.87
86 87 5.629849 GGTCCGATTTATCTGTACATTCTCG 59.370 44.000 0.00 0.14 0.00 4.04
87 88 6.436261 GTCCGATTTATCTGTACATTCTCGA 58.564 40.000 0.00 0.00 0.00 4.04
88 89 7.085116 GTCCGATTTATCTGTACATTCTCGAT 58.915 38.462 0.00 0.00 0.00 3.59
89 90 8.235226 GTCCGATTTATCTGTACATTCTCGATA 58.765 37.037 0.00 0.00 0.00 2.92
90 91 8.789762 TCCGATTTATCTGTACATTCTCGATAA 58.210 33.333 9.33 9.33 0.00 1.75
91 92 9.406828 CCGATTTATCTGTACATTCTCGATAAA 57.593 33.333 20.58 20.58 39.46 1.40
116 117 4.222114 GCTTGTCATAGCGATAAATTGGC 58.778 43.478 0.00 0.00 0.00 4.52
117 118 4.787598 CTTGTCATAGCGATAAATTGGCC 58.212 43.478 0.00 0.00 0.00 5.36
118 119 3.146066 TGTCATAGCGATAAATTGGCCC 58.854 45.455 0.00 0.00 0.00 5.80
119 120 3.146066 GTCATAGCGATAAATTGGCCCA 58.854 45.455 0.00 0.00 0.00 5.36
120 121 3.568007 GTCATAGCGATAAATTGGCCCAA 59.432 43.478 0.00 0.00 0.00 4.12
121 122 4.037446 GTCATAGCGATAAATTGGCCCAAA 59.963 41.667 0.00 0.00 0.00 3.28
122 123 2.959507 AGCGATAAATTGGCCCAAAC 57.040 45.000 0.00 0.00 0.00 2.93
123 124 1.134175 AGCGATAAATTGGCCCAAACG 59.866 47.619 0.00 3.34 0.00 3.60
124 125 1.133407 GCGATAAATTGGCCCAAACGA 59.867 47.619 0.00 0.00 0.00 3.85
125 126 2.223711 GCGATAAATTGGCCCAAACGAT 60.224 45.455 0.00 0.00 0.00 3.73
126 127 3.003897 GCGATAAATTGGCCCAAACGATA 59.996 43.478 0.00 0.00 0.00 2.92
127 128 4.498345 GCGATAAATTGGCCCAAACGATAA 60.498 41.667 0.00 0.00 0.00 1.75
128 129 5.583495 CGATAAATTGGCCCAAACGATAAA 58.417 37.500 0.00 0.00 0.00 1.40
129 130 5.457473 CGATAAATTGGCCCAAACGATAAAC 59.543 40.000 0.00 0.00 0.00 2.01
130 131 4.608948 AAATTGGCCCAAACGATAAACA 57.391 36.364 0.00 0.00 0.00 2.83
131 132 3.866883 ATTGGCCCAAACGATAAACAG 57.133 42.857 0.00 0.00 0.00 3.16
132 133 2.279935 TGGCCCAAACGATAAACAGT 57.720 45.000 0.00 0.00 0.00 3.55
133 134 3.420300 TGGCCCAAACGATAAACAGTA 57.580 42.857 0.00 0.00 0.00 2.74
134 135 3.752665 TGGCCCAAACGATAAACAGTAA 58.247 40.909 0.00 0.00 0.00 2.24
135 136 4.142790 TGGCCCAAACGATAAACAGTAAA 58.857 39.130 0.00 0.00 0.00 2.01
136 137 4.216687 TGGCCCAAACGATAAACAGTAAAG 59.783 41.667 0.00 0.00 0.00 1.85
137 138 4.456566 GGCCCAAACGATAAACAGTAAAGA 59.543 41.667 0.00 0.00 0.00 2.52
138 139 5.124936 GGCCCAAACGATAAACAGTAAAGAT 59.875 40.000 0.00 0.00 0.00 2.40
139 140 6.316890 GGCCCAAACGATAAACAGTAAAGATA 59.683 38.462 0.00 0.00 0.00 1.98
140 141 7.148205 GGCCCAAACGATAAACAGTAAAGATAA 60.148 37.037 0.00 0.00 0.00 1.75
141 142 7.908601 GCCCAAACGATAAACAGTAAAGATAAG 59.091 37.037 0.00 0.00 0.00 1.73
142 143 8.395633 CCCAAACGATAAACAGTAAAGATAAGG 58.604 37.037 0.00 0.00 0.00 2.69
143 144 7.908601 CCAAACGATAAACAGTAAAGATAAGGC 59.091 37.037 0.00 0.00 0.00 4.35
144 145 8.447833 CAAACGATAAACAGTAAAGATAAGGCA 58.552 33.333 0.00 0.00 0.00 4.75
145 146 8.732746 AACGATAAACAGTAAAGATAAGGCAT 57.267 30.769 0.00 0.00 0.00 4.40
146 147 9.826574 AACGATAAACAGTAAAGATAAGGCATA 57.173 29.630 0.00 0.00 0.00 3.14
147 148 9.826574 ACGATAAACAGTAAAGATAAGGCATAA 57.173 29.630 0.00 0.00 0.00 1.90
161 162 8.485976 GATAAGGCATAATCTTATCAGTCACC 57.514 38.462 15.05 0.00 45.97 4.02
162 163 5.234466 AGGCATAATCTTATCAGTCACCC 57.766 43.478 0.00 0.00 0.00 4.61
163 164 4.042187 AGGCATAATCTTATCAGTCACCCC 59.958 45.833 0.00 0.00 0.00 4.95
164 165 4.202461 GGCATAATCTTATCAGTCACCCCA 60.202 45.833 0.00 0.00 0.00 4.96
165 166 5.376625 GCATAATCTTATCAGTCACCCCAA 58.623 41.667 0.00 0.00 0.00 4.12
166 167 5.471456 GCATAATCTTATCAGTCACCCCAAG 59.529 44.000 0.00 0.00 0.00 3.61
167 168 6.688922 GCATAATCTTATCAGTCACCCCAAGA 60.689 42.308 0.00 0.00 0.00 3.02
168 169 5.365021 AATCTTATCAGTCACCCCAAGAG 57.635 43.478 0.00 0.00 0.00 2.85
169 170 3.791320 TCTTATCAGTCACCCCAAGAGT 58.209 45.455 0.00 0.00 0.00 3.24
170 171 4.942944 TCTTATCAGTCACCCCAAGAGTA 58.057 43.478 0.00 0.00 0.00 2.59
171 172 4.956700 TCTTATCAGTCACCCCAAGAGTAG 59.043 45.833 0.00 0.00 0.00 2.57
172 173 1.267121 TCAGTCACCCCAAGAGTAGC 58.733 55.000 0.00 0.00 0.00 3.58
173 174 0.976641 CAGTCACCCCAAGAGTAGCA 59.023 55.000 0.00 0.00 0.00 3.49
174 175 1.347707 CAGTCACCCCAAGAGTAGCAA 59.652 52.381 0.00 0.00 0.00 3.91
175 176 2.026822 CAGTCACCCCAAGAGTAGCAAT 60.027 50.000 0.00 0.00 0.00 3.56
176 177 3.197766 CAGTCACCCCAAGAGTAGCAATA 59.802 47.826 0.00 0.00 0.00 1.90
177 178 3.844211 AGTCACCCCAAGAGTAGCAATAA 59.156 43.478 0.00 0.00 0.00 1.40
178 179 4.288626 AGTCACCCCAAGAGTAGCAATAAA 59.711 41.667 0.00 0.00 0.00 1.40
179 180 5.044846 AGTCACCCCAAGAGTAGCAATAAAT 60.045 40.000 0.00 0.00 0.00 1.40
180 181 5.297029 GTCACCCCAAGAGTAGCAATAAATC 59.703 44.000 0.00 0.00 0.00 2.17
181 182 5.045213 TCACCCCAAGAGTAGCAATAAATCA 60.045 40.000 0.00 0.00 0.00 2.57
182 183 5.652014 CACCCCAAGAGTAGCAATAAATCAA 59.348 40.000 0.00 0.00 0.00 2.57
183 184 6.152661 CACCCCAAGAGTAGCAATAAATCAAA 59.847 38.462 0.00 0.00 0.00 2.69
184 185 6.152831 ACCCCAAGAGTAGCAATAAATCAAAC 59.847 38.462 0.00 0.00 0.00 2.93
185 186 6.258160 CCCAAGAGTAGCAATAAATCAAACG 58.742 40.000 0.00 0.00 0.00 3.60
186 187 6.093495 CCCAAGAGTAGCAATAAATCAAACGA 59.907 38.462 0.00 0.00 0.00 3.85
187 188 7.201732 CCCAAGAGTAGCAATAAATCAAACGAT 60.202 37.037 0.00 0.00 0.00 3.73
188 189 8.826710 CCAAGAGTAGCAATAAATCAAACGATA 58.173 33.333 0.00 0.00 0.00 2.92
194 195 7.755582 AGCAATAAATCAAACGATAAAAGGC 57.244 32.000 0.00 0.00 0.00 4.35
195 196 7.547227 AGCAATAAATCAAACGATAAAAGGCT 58.453 30.769 0.00 0.00 0.00 4.58
196 197 7.489113 AGCAATAAATCAAACGATAAAAGGCTG 59.511 33.333 0.00 0.00 0.00 4.85
197 198 7.487829 GCAATAAATCAAACGATAAAAGGCTGA 59.512 33.333 0.00 0.00 0.00 4.26
198 199 9.352784 CAATAAATCAAACGATAAAAGGCTGAA 57.647 29.630 0.00 0.00 0.00 3.02
200 201 9.736023 ATAAATCAAACGATAAAAGGCTGAATC 57.264 29.630 0.00 0.00 0.00 2.52
201 202 5.216566 TCAAACGATAAAAGGCTGAATCG 57.783 39.130 18.96 18.96 45.06 3.34
202 203 4.094294 TCAAACGATAAAAGGCTGAATCGG 59.906 41.667 22.35 10.80 44.12 4.18
203 204 3.536956 ACGATAAAAGGCTGAATCGGA 57.463 42.857 22.35 0.00 44.12 4.55
204 205 3.869065 ACGATAAAAGGCTGAATCGGAA 58.131 40.909 22.35 0.00 44.12 4.30
205 206 3.871594 ACGATAAAAGGCTGAATCGGAAG 59.128 43.478 22.35 4.26 44.12 3.46
206 207 4.382685 ACGATAAAAGGCTGAATCGGAAGA 60.383 41.667 22.35 0.00 44.12 2.87
256 257 2.125225 GGGGTGGGTTCCTCCTCT 59.875 66.667 5.22 0.00 34.99 3.69
275 276 7.287927 CCTCCTCTAAGTGGATATGTGAAACTA 59.712 40.741 0.00 0.00 32.90 2.24
301 302 3.836365 TTATGTGGGCTTCGATGATGA 57.164 42.857 1.89 0.00 0.00 2.92
310 311 3.129109 GCTTCGATGATGAGATGCTCAA 58.871 45.455 1.89 0.00 44.04 3.02
343 344 3.868077 GGTGCTATCATCTGTGACAAGTC 59.132 47.826 0.00 0.00 37.14 3.01
359 360 7.715249 TGTGACAAGTCAAGAAAGTTTATAGCT 59.285 33.333 4.20 0.00 41.85 3.32
361 362 6.903419 ACAAGTCAAGAAAGTTTATAGCTGC 58.097 36.000 0.00 0.00 0.00 5.25
371 374 8.049721 AGAAAGTTTATAGCTGCTGGAAATAGT 58.950 33.333 13.43 2.10 0.00 2.12
372 375 7.793927 AAGTTTATAGCTGCTGGAAATAGTC 57.206 36.000 13.43 1.19 0.00 2.59
390 393 4.576216 AGTCGTATAGATTGGTGCTCAG 57.424 45.455 0.00 0.00 0.00 3.35
397 400 2.996631 AGATTGGTGCTCAGATGTTCC 58.003 47.619 0.00 0.00 0.00 3.62
400 403 2.957402 TGGTGCTCAGATGTTCCTTT 57.043 45.000 0.00 0.00 0.00 3.11
402 405 2.087646 GGTGCTCAGATGTTCCTTTCC 58.912 52.381 0.00 0.00 0.00 3.13
403 406 1.734465 GTGCTCAGATGTTCCTTTCCG 59.266 52.381 0.00 0.00 0.00 4.30
404 407 1.347707 TGCTCAGATGTTCCTTTCCGT 59.652 47.619 0.00 0.00 0.00 4.69
417 420 1.415672 TTTCCGTGGAGGTTCAGGCT 61.416 55.000 0.00 0.00 41.99 4.58
425 428 3.502595 GTGGAGGTTCAGGCTTTAAAGTC 59.497 47.826 11.99 11.99 0.00 3.01
443 446 2.438021 AGTCTGGACTAACTTTGGCACA 59.562 45.455 0.95 0.00 40.43 4.57
444 447 3.118038 AGTCTGGACTAACTTTGGCACAA 60.118 43.478 0.95 0.00 41.89 3.33
462 465 4.316645 CACAATCCATTGGATGCAACAAA 58.683 39.130 18.87 0.00 42.27 2.83
479 482 5.988561 GCAACAAATTGGTGGTTAATTCTGA 59.011 36.000 13.37 0.00 35.13 3.27
486 489 6.573664 TTGGTGGTTAATTCTGACAATCTG 57.426 37.500 0.00 0.00 0.00 2.90
487 490 5.009631 TGGTGGTTAATTCTGACAATCTGG 58.990 41.667 0.00 0.00 0.00 3.86
488 491 5.222027 TGGTGGTTAATTCTGACAATCTGGA 60.222 40.000 0.00 0.00 0.00 3.86
489 492 5.355350 GGTGGTTAATTCTGACAATCTGGAG 59.645 44.000 0.00 0.00 0.00 3.86
490 493 5.940470 GTGGTTAATTCTGACAATCTGGAGT 59.060 40.000 0.00 0.00 0.00 3.85
491 494 6.431234 GTGGTTAATTCTGACAATCTGGAGTT 59.569 38.462 0.00 0.00 0.00 3.01
493 496 6.655003 GGTTAATTCTGACAATCTGGAGTTGA 59.345 38.462 0.00 0.00 0.00 3.18
500 505 6.065976 TGACAATCTGGAGTTGATTACCAT 57.934 37.500 0.00 0.00 33.38 3.55
503 508 7.552687 TGACAATCTGGAGTTGATTACCATAAC 59.447 37.037 0.00 0.00 33.38 1.89
504 509 7.402054 ACAATCTGGAGTTGATTACCATAACA 58.598 34.615 0.00 0.00 33.38 2.41
518 523 5.606348 ACCATAACAAAAGAAGGTGCAAA 57.394 34.783 0.00 0.00 0.00 3.68
521 526 5.691754 CCATAACAAAAGAAGGTGCAAACTC 59.308 40.000 0.00 0.00 0.00 3.01
546 551 1.691434 TGGGCTTCGGCTTCAATTTTT 59.309 42.857 0.00 0.00 41.44 1.94
585 591 5.482163 TGTCATGCGGATTTCCTCATATA 57.518 39.130 1.91 0.00 39.27 0.86
586 592 6.053632 TGTCATGCGGATTTCCTCATATAT 57.946 37.500 1.91 0.00 39.27 0.86
587 593 6.475504 TGTCATGCGGATTTCCTCATATATT 58.524 36.000 1.91 0.00 39.27 1.28
633 639 1.056660 AACTCGGTGACCCATGAACT 58.943 50.000 0.00 0.00 0.00 3.01
639 645 1.407437 GGTGACCCATGAACTGGCTAG 60.407 57.143 0.00 0.00 44.46 3.42
644 650 4.473196 TGACCCATGAACTGGCTAGATTAA 59.527 41.667 3.17 0.00 44.46 1.40
645 651 5.045213 TGACCCATGAACTGGCTAGATTAAA 60.045 40.000 3.17 0.00 44.46 1.52
646 652 5.826643 ACCCATGAACTGGCTAGATTAAAA 58.173 37.500 3.17 0.00 44.46 1.52
648 654 6.378280 ACCCATGAACTGGCTAGATTAAAAAG 59.622 38.462 3.17 0.00 44.46 2.27
657 663 5.710099 TGGCTAGATTAAAAAGGTTCTGTGG 59.290 40.000 0.00 0.00 0.00 4.17
662 668 9.720769 CTAGATTAAAAAGGTTCTGTGGTTCTA 57.279 33.333 0.00 0.00 0.00 2.10
685 691 2.749076 TGTTTGGATGAATGAAGCTCCG 59.251 45.455 0.00 0.00 0.00 4.63
691 697 2.559698 TGAATGAAGCTCCGGTTTCA 57.440 45.000 16.82 16.82 44.36 2.69
697 703 2.151202 GAAGCTCCGGTTTCAATCACA 58.849 47.619 0.00 0.00 33.73 3.58
698 704 1.813513 AGCTCCGGTTTCAATCACAG 58.186 50.000 0.00 0.00 0.00 3.66
699 705 0.169009 GCTCCGGTTTCAATCACAGC 59.831 55.000 0.00 0.00 0.00 4.40
887 893 2.643551 GAAGAAGCCGAATTCATCCCA 58.356 47.619 6.22 0.00 0.00 4.37
899 905 1.450312 CATCCCAGCCCAGACGTTC 60.450 63.158 0.00 0.00 0.00 3.95
900 906 1.613630 ATCCCAGCCCAGACGTTCT 60.614 57.895 0.00 0.00 0.00 3.01
912 920 2.476619 CAGACGTTCTGTACAAAGCCAG 59.523 50.000 0.00 0.00 39.58 4.85
935 943 0.107165 GGCCCAATTAGAGACGCCTT 60.107 55.000 0.00 0.00 33.50 4.35
950 958 3.442996 CCTTGACGGCTAGAACCAG 57.557 57.895 0.00 0.00 0.00 4.00
951 959 0.108138 CCTTGACGGCTAGAACCAGG 60.108 60.000 0.00 0.00 0.00 4.45
952 960 0.608640 CTTGACGGCTAGAACCAGGT 59.391 55.000 0.00 0.00 0.00 4.00
953 961 0.606604 TTGACGGCTAGAACCAGGTC 59.393 55.000 0.00 0.00 0.00 3.85
954 962 1.139095 GACGGCTAGAACCAGGTCG 59.861 63.158 0.00 0.00 0.00 4.79
1647 3404 0.736053 GAGACTAGTGAGTGGAGCCG 59.264 60.000 0.00 0.00 35.45 5.52
1792 3549 5.409520 TGAGCAACAACTATCTGTGATCAAC 59.590 40.000 0.00 0.00 0.00 3.18
1991 6106 1.450312 GCCCTCTTGGACATGTCGG 60.450 63.158 19.33 14.23 35.39 4.79
1992 6107 1.899437 GCCCTCTTGGACATGTCGGA 61.899 60.000 19.33 15.10 35.39 4.55
1993 6108 0.176680 CCCTCTTGGACATGTCGGAG 59.823 60.000 23.42 23.42 35.39 4.63
1999 6114 1.139095 GGACATGTCGGAGTCGGAC 59.861 63.158 20.71 20.71 35.63 4.79
2006 6121 4.415332 CGGAGTCGGACGTGTGGG 62.415 72.222 0.00 0.00 0.00 4.61
2017 6132 2.725641 GTGTGGGCGGTTGGTTTC 59.274 61.111 0.00 0.00 0.00 2.78
2026 6141 2.622962 GGTTGGTTTCGCGGAAGGG 61.623 63.158 6.13 0.00 46.71 3.95
2035 6150 2.588439 GCGGAAGGGGTTAGGGTC 59.412 66.667 0.00 0.00 0.00 4.46
2050 6165 2.907892 AGGGTCATCTTCCTCAGAACA 58.092 47.619 0.00 0.00 34.16 3.18
2109 6224 4.938832 CCGAGTCAACAATGTGGGTAAATA 59.061 41.667 0.00 0.00 0.00 1.40
2119 6234 8.169977 ACAATGTGGGTAAATATAGCATTGAG 57.830 34.615 17.54 0.00 42.19 3.02
2171 6289 2.480416 CGAGGTACAAGCTAGCCTCTTG 60.480 54.545 12.13 12.24 43.84 3.02
2192 6310 4.350346 TGCTGTTTTCTCAAACACATTCG 58.650 39.130 0.00 0.00 46.06 3.34
2197 6315 5.797934 TGTTTTCTCAAACACATTCGTCAAC 59.202 36.000 0.00 0.00 46.06 3.18
2214 6332 8.470040 TTCGTCAACTTATGGACAGTAAATAC 57.530 34.615 0.00 0.00 33.66 1.89
2236 6354 3.426859 CGCCATCGATCACTATTTCAGTC 59.573 47.826 0.00 0.00 34.38 3.51
2265 6383 4.446051 GCTTGTAGCTTAGATCGTTGGATC 59.554 45.833 0.00 0.00 42.69 3.36
2276 6394 3.880047 TCGTTGGATCGTTGGATAGTT 57.120 42.857 0.00 0.00 31.51 2.24
2277 6395 4.196626 TCGTTGGATCGTTGGATAGTTT 57.803 40.909 0.00 0.00 31.51 2.66
2279 6397 5.722263 TCGTTGGATCGTTGGATAGTTTAA 58.278 37.500 0.00 0.00 31.51 1.52
2280 6398 5.808540 TCGTTGGATCGTTGGATAGTTTAAG 59.191 40.000 0.00 0.00 31.51 1.85
2281 6399 5.579511 CGTTGGATCGTTGGATAGTTTAAGT 59.420 40.000 0.00 0.00 31.51 2.24
2445 11705 4.531732 AGGAAGACTTTGAAGATGAGCTCT 59.468 41.667 16.19 0.00 34.96 4.09
2446 11706 5.719085 AGGAAGACTTTGAAGATGAGCTCTA 59.281 40.000 16.19 1.49 32.41 2.43
2487 11747 0.948678 CGGTGTTGGGTAGTTTGGTG 59.051 55.000 0.00 0.00 0.00 4.17
2501 11766 5.359194 AGTTTGGTGTATCTCTATGGTGG 57.641 43.478 0.00 0.00 0.00 4.61
2503 11768 5.104900 AGTTTGGTGTATCTCTATGGTGGAC 60.105 44.000 0.00 0.00 0.00 4.02
2505 11770 2.957006 GGTGTATCTCTATGGTGGACGT 59.043 50.000 0.00 0.00 0.00 4.34
2506 11771 3.383825 GGTGTATCTCTATGGTGGACGTT 59.616 47.826 0.00 0.00 0.00 3.99
2508 11773 4.097437 GTGTATCTCTATGGTGGACGTTCA 59.903 45.833 0.00 0.00 0.00 3.18
2509 11774 4.893524 TGTATCTCTATGGTGGACGTTCAT 59.106 41.667 0.00 0.00 0.00 2.57
2512 11777 4.503910 TCTCTATGGTGGACGTTCATTTG 58.496 43.478 0.00 0.00 0.00 2.32
2513 11778 4.020573 TCTCTATGGTGGACGTTCATTTGT 60.021 41.667 0.00 0.00 0.00 2.83
2514 11779 5.186215 TCTCTATGGTGGACGTTCATTTGTA 59.814 40.000 0.00 0.00 0.00 2.41
2515 11780 5.416083 TCTATGGTGGACGTTCATTTGTAG 58.584 41.667 0.00 1.22 0.00 2.74
2517 11782 4.603989 TGGTGGACGTTCATTTGTAGTA 57.396 40.909 0.00 0.00 0.00 1.82
2518 11783 4.309099 TGGTGGACGTTCATTTGTAGTAC 58.691 43.478 0.00 0.00 0.00 2.73
2519 11784 4.039488 TGGTGGACGTTCATTTGTAGTACT 59.961 41.667 0.00 0.00 0.00 2.73
2520 11785 4.387862 GGTGGACGTTCATTTGTAGTACTG 59.612 45.833 5.39 0.00 0.00 2.74
2521 11786 4.387862 GTGGACGTTCATTTGTAGTACTGG 59.612 45.833 5.39 0.00 0.00 4.00
2522 11787 4.039488 TGGACGTTCATTTGTAGTACTGGT 59.961 41.667 5.39 0.00 0.00 4.00
2524 11789 4.232221 ACGTTCATTTGTAGTACTGGTCG 58.768 43.478 5.39 3.82 0.00 4.79
2526 11791 4.089493 CGTTCATTTGTAGTACTGGTCGTG 59.911 45.833 5.39 0.00 0.00 4.35
2527 11792 3.581755 TCATTTGTAGTACTGGTCGTGC 58.418 45.455 5.39 0.00 0.00 5.34
2528 11793 2.443887 TTTGTAGTACTGGTCGTGCC 57.556 50.000 5.39 0.00 37.90 5.01
2529 11794 0.604578 TTGTAGTACTGGTCGTGCCC 59.395 55.000 5.39 0.00 36.04 5.36
2530 11795 0.251474 TGTAGTACTGGTCGTGCCCT 60.251 55.000 5.39 0.00 36.04 5.19
2543 11808 0.032540 GTGCCCTTTTGCCTGAACTG 59.967 55.000 0.00 0.00 0.00 3.16
2551 11816 2.185004 TTGCCTGAACTGGAGTTAGC 57.815 50.000 2.01 0.00 38.56 3.09
2559 11824 3.565482 TGAACTGGAGTTAGCTTTGCTTG 59.435 43.478 0.00 0.00 40.44 4.01
2570 11838 1.746760 CTTTGCTTGAGTTGTGCGTC 58.253 50.000 0.00 0.00 0.00 5.19
2596 11887 1.419387 AGCAGGGCATCTATGGTTCTC 59.581 52.381 0.00 0.00 0.00 2.87
2603 11939 2.487934 CATCTATGGTTCTCCCTTGCG 58.512 52.381 0.00 0.00 0.00 4.85
2629 11965 7.987649 AGTTAACACAAACTCGGTTTCAATAA 58.012 30.769 8.61 0.00 34.60 1.40
2700 12040 6.150307 TGCTACTCAAAATTCGATTGCCTTTA 59.850 34.615 0.00 0.00 0.00 1.85
2704 12044 8.831715 ACTCAAAATTCGATTGCCTTTATTTT 57.168 26.923 0.00 0.00 0.00 1.82
2705 12045 9.271828 ACTCAAAATTCGATTGCCTTTATTTTT 57.728 25.926 0.00 0.00 0.00 1.94
2727 12067 3.953712 TTTCTGCTCGAGTTGTGGATA 57.046 42.857 15.13 0.00 0.00 2.59
2739 12079 6.367695 TCGAGTTGTGGATAGTGTTTACATTG 59.632 38.462 0.00 0.00 0.00 2.82
2771 12111 9.357652 ACATTTTGAATTGCAGACATATGTTAC 57.642 29.630 10.30 3.43 0.00 2.50
2787 12127 9.035607 ACATATGTTACTCATTCTAAAGAAGCG 57.964 33.333 1.41 0.00 37.48 4.68
2819 12161 0.640768 GCAAGTGACACTATCGCGAC 59.359 55.000 12.93 0.00 43.10 5.19
2825 12167 1.749063 TGACACTATCGCGACCATCTT 59.251 47.619 12.93 0.00 0.00 2.40
2847 12189 2.175069 AGGATGAGGAGCTGATGCATTT 59.825 45.455 0.00 0.00 42.74 2.32
2853 12196 5.195185 TGAGGAGCTGATGCATTTCATAAA 58.805 37.500 0.00 0.00 42.74 1.40
2878 12221 7.044798 ACTTCAAATTTTTGTTTCCGGATTCA 58.955 30.769 4.15 4.81 39.18 2.57
2879 12222 6.836577 TCAAATTTTTGTTTCCGGATTCAC 57.163 33.333 4.15 3.19 39.18 3.18
2880 12223 5.460419 TCAAATTTTTGTTTCCGGATTCACG 59.540 36.000 4.15 0.00 39.18 4.35
2881 12224 2.409152 TTTTGTTTCCGGATTCACGC 57.591 45.000 4.15 0.00 0.00 5.34
2882 12225 1.309950 TTTGTTTCCGGATTCACGCA 58.690 45.000 4.15 0.00 0.00 5.24
2883 12226 1.529226 TTGTTTCCGGATTCACGCAT 58.471 45.000 4.15 0.00 0.00 4.73
2884 12227 0.801872 TGTTTCCGGATTCACGCATG 59.198 50.000 4.15 0.00 0.00 4.06
2911 12256 5.942872 GTGTTCAATAAGGACACAATGGAG 58.057 41.667 1.92 0.00 42.36 3.86
2930 12320 8.781196 CAATGGAGTTCATGTATCATTTCTAGG 58.219 37.037 0.00 0.00 35.99 3.02
2955 12345 6.503524 AGCACGAAACACATAAATTGAAGTT 58.496 32.000 0.00 0.00 0.00 2.66
3013 12404 6.373005 TTTACAGAACTCCATCTTCCATCA 57.627 37.500 0.00 0.00 0.00 3.07
3017 12408 6.251471 ACAGAACTCCATCTTCCATCAAAAT 58.749 36.000 0.00 0.00 0.00 1.82
3045 12436 7.986085 ACATGCAACTTTGAAGACTAATACT 57.014 32.000 0.00 0.00 0.00 2.12
3046 12437 8.034058 ACATGCAACTTTGAAGACTAATACTC 57.966 34.615 0.00 0.00 0.00 2.59
3047 12438 7.119846 ACATGCAACTTTGAAGACTAATACTCC 59.880 37.037 0.00 0.00 0.00 3.85
3048 12439 5.938125 TGCAACTTTGAAGACTAATACTCCC 59.062 40.000 0.00 0.00 0.00 4.30
3049 12440 6.174049 GCAACTTTGAAGACTAATACTCCCT 58.826 40.000 0.00 0.00 0.00 4.20
3050 12441 6.314152 GCAACTTTGAAGACTAATACTCCCTC 59.686 42.308 0.00 0.00 0.00 4.30
3051 12442 6.547930 ACTTTGAAGACTAATACTCCCTCC 57.452 41.667 0.00 0.00 0.00 4.30
3052 12443 5.127356 ACTTTGAAGACTAATACTCCCTCCG 59.873 44.000 0.00 0.00 0.00 4.63
3053 12444 4.246712 TGAAGACTAATACTCCCTCCGT 57.753 45.455 0.00 0.00 0.00 4.69
3054 12445 4.607239 TGAAGACTAATACTCCCTCCGTT 58.393 43.478 0.00 0.00 0.00 4.44
3055 12446 4.643784 TGAAGACTAATACTCCCTCCGTTC 59.356 45.833 0.00 0.00 0.00 3.95
3056 12447 3.564264 AGACTAATACTCCCTCCGTTCC 58.436 50.000 0.00 0.00 0.00 3.62
3057 12448 3.204831 AGACTAATACTCCCTCCGTTCCT 59.795 47.826 0.00 0.00 0.00 3.36
3058 12449 4.414846 AGACTAATACTCCCTCCGTTCCTA 59.585 45.833 0.00 0.00 0.00 2.94
3059 12450 5.103771 AGACTAATACTCCCTCCGTTCCTAA 60.104 44.000 0.00 0.00 0.00 2.69
3060 12451 5.522641 ACTAATACTCCCTCCGTTCCTAAA 58.477 41.667 0.00 0.00 0.00 1.85
3061 12452 6.141790 ACTAATACTCCCTCCGTTCCTAAAT 58.858 40.000 0.00 0.00 0.00 1.40
3062 12453 7.300658 ACTAATACTCCCTCCGTTCCTAAATA 58.699 38.462 0.00 0.00 0.00 1.40
3063 12454 7.954620 ACTAATACTCCCTCCGTTCCTAAATAT 59.045 37.037 0.00 0.00 0.00 1.28
3064 12455 7.628501 AATACTCCCTCCGTTCCTAAATATT 57.371 36.000 0.00 0.00 0.00 1.28
3065 12456 5.970501 ACTCCCTCCGTTCCTAAATATTT 57.029 39.130 5.89 5.89 0.00 1.40
3066 12457 5.681639 ACTCCCTCCGTTCCTAAATATTTG 58.318 41.667 11.05 1.40 0.00 2.32
3067 12458 5.191124 ACTCCCTCCGTTCCTAAATATTTGT 59.809 40.000 11.05 0.00 0.00 2.83
3068 12459 5.677567 TCCCTCCGTTCCTAAATATTTGTC 58.322 41.667 11.05 0.00 0.00 3.18
3069 12460 5.427481 TCCCTCCGTTCCTAAATATTTGTCT 59.573 40.000 11.05 0.00 0.00 3.41
3070 12461 6.069847 TCCCTCCGTTCCTAAATATTTGTCTT 60.070 38.462 11.05 0.00 0.00 3.01
3071 12462 6.602009 CCCTCCGTTCCTAAATATTTGTCTTT 59.398 38.462 11.05 0.00 0.00 2.52
3072 12463 7.201705 CCCTCCGTTCCTAAATATTTGTCTTTC 60.202 40.741 11.05 0.00 0.00 2.62
3073 12464 7.553044 CCTCCGTTCCTAAATATTTGTCTTTCT 59.447 37.037 11.05 0.00 0.00 2.52
3074 12465 9.595823 CTCCGTTCCTAAATATTTGTCTTTCTA 57.404 33.333 11.05 0.00 0.00 2.10
3075 12466 9.595823 TCCGTTCCTAAATATTTGTCTTTCTAG 57.404 33.333 11.05 0.00 0.00 2.43
3076 12467 9.595823 CCGTTCCTAAATATTTGTCTTTCTAGA 57.404 33.333 11.05 0.00 0.00 2.43
3086 12477 9.793259 ATATTTGTCTTTCTAGAGGTTTCAACA 57.207 29.630 0.00 0.00 0.00 3.33
3087 12478 7.931578 TTTGTCTTTCTAGAGGTTTCAACAA 57.068 32.000 0.00 0.00 0.00 2.83
3088 12479 7.553881 TTGTCTTTCTAGAGGTTTCAACAAG 57.446 36.000 0.00 0.00 0.00 3.16
3089 12480 6.650120 TGTCTTTCTAGAGGTTTCAACAAGT 58.350 36.000 0.00 0.00 0.00 3.16
3090 12481 6.538742 TGTCTTTCTAGAGGTTTCAACAAGTG 59.461 38.462 0.00 0.00 0.00 3.16
3091 12482 6.761714 GTCTTTCTAGAGGTTTCAACAAGTGA 59.238 38.462 0.00 0.00 0.00 3.41
3092 12483 6.761714 TCTTTCTAGAGGTTTCAACAAGTGAC 59.238 38.462 0.00 0.00 35.39 3.67
3093 12484 5.871396 TCTAGAGGTTTCAACAAGTGACT 57.129 39.130 0.00 0.00 35.39 3.41
3094 12485 6.971726 TCTAGAGGTTTCAACAAGTGACTA 57.028 37.500 0.00 0.00 35.39 2.59
3095 12486 6.746120 TCTAGAGGTTTCAACAAGTGACTAC 58.254 40.000 0.00 0.00 35.39 2.73
3096 12487 5.353394 AGAGGTTTCAACAAGTGACTACA 57.647 39.130 0.00 0.00 35.39 2.74
3097 12488 5.930135 AGAGGTTTCAACAAGTGACTACAT 58.070 37.500 0.00 0.00 35.39 2.29
3098 12489 7.062749 AGAGGTTTCAACAAGTGACTACATA 57.937 36.000 0.00 0.00 35.39 2.29
3099 12490 6.929606 AGAGGTTTCAACAAGTGACTACATAC 59.070 38.462 0.00 0.00 35.39 2.39
3100 12491 5.694910 AGGTTTCAACAAGTGACTACATACG 59.305 40.000 0.00 0.00 35.39 3.06
3101 12492 5.107220 GGTTTCAACAAGTGACTACATACGG 60.107 44.000 0.00 0.00 35.39 4.02
3102 12493 5.456548 TTCAACAAGTGACTACATACGGA 57.543 39.130 0.00 0.00 35.39 4.69
3103 12494 5.055642 TCAACAAGTGACTACATACGGAG 57.944 43.478 0.00 0.00 0.00 4.63
3104 12495 3.505464 ACAAGTGACTACATACGGAGC 57.495 47.619 0.00 0.00 0.00 4.70
3105 12496 2.823747 ACAAGTGACTACATACGGAGCA 59.176 45.455 0.00 0.00 0.00 4.26
3106 12497 3.257375 ACAAGTGACTACATACGGAGCAA 59.743 43.478 0.00 0.00 0.00 3.91
3107 12498 4.242475 CAAGTGACTACATACGGAGCAAA 58.758 43.478 0.00 0.00 0.00 3.68
3108 12499 4.530710 AGTGACTACATACGGAGCAAAA 57.469 40.909 0.00 0.00 0.00 2.44
3109 12500 5.086104 AGTGACTACATACGGAGCAAAAT 57.914 39.130 0.00 0.00 0.00 1.82
3110 12501 4.870426 AGTGACTACATACGGAGCAAAATG 59.130 41.667 0.00 0.00 0.00 2.32
3111 12502 4.868171 GTGACTACATACGGAGCAAAATGA 59.132 41.667 0.00 0.00 0.00 2.57
3112 12503 5.005779 GTGACTACATACGGAGCAAAATGAG 59.994 44.000 0.00 0.00 0.00 2.90
3113 12504 5.086104 ACTACATACGGAGCAAAATGAGT 57.914 39.130 0.00 0.00 0.00 3.41
3114 12505 4.870426 ACTACATACGGAGCAAAATGAGTG 59.130 41.667 0.00 0.00 0.00 3.51
3115 12506 3.937814 ACATACGGAGCAAAATGAGTGA 58.062 40.909 0.00 0.00 0.00 3.41
3116 12507 4.323417 ACATACGGAGCAAAATGAGTGAA 58.677 39.130 0.00 0.00 0.00 3.18
3117 12508 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
3118 12509 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
3119 12510 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
3120 12511 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
3121 12512 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
3122 12513 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
3123 12514 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
3156 12547 7.956328 ATGTCTATATACATCCGTATGTGGT 57.044 36.000 3.56 0.00 45.99 4.16
3158 12549 8.502105 TGTCTATATACATCCGTATGTGGTAG 57.498 38.462 3.56 3.93 45.99 3.18
3159 12550 8.105197 TGTCTATATACATCCGTATGTGGTAGT 58.895 37.037 3.56 0.00 45.99 2.73
3160 12551 8.610896 GTCTATATACATCCGTATGTGGTAGTC 58.389 40.741 3.56 0.00 45.99 2.59
3161 12552 8.546322 TCTATATACATCCGTATGTGGTAGTCT 58.454 37.037 3.56 0.00 45.99 3.24
3162 12553 9.828039 CTATATACATCCGTATGTGGTAGTCTA 57.172 37.037 3.56 0.00 45.99 2.59
3164 12555 9.696572 ATATACATCCGTATGTGGTAGTCTATT 57.303 33.333 3.56 0.00 45.99 1.73
3165 12556 6.726490 ACATCCGTATGTGGTAGTCTATTT 57.274 37.500 0.00 0.00 44.79 1.40
3166 12557 6.513180 ACATCCGTATGTGGTAGTCTATTTG 58.487 40.000 0.00 0.00 44.79 2.32
3167 12558 6.322969 ACATCCGTATGTGGTAGTCTATTTGA 59.677 38.462 0.00 0.00 44.79 2.69
3168 12559 6.778834 TCCGTATGTGGTAGTCTATTTGAA 57.221 37.500 0.00 0.00 0.00 2.69
3169 12560 7.172868 TCCGTATGTGGTAGTCTATTTGAAA 57.827 36.000 0.00 0.00 0.00 2.69
3170 12561 7.788026 TCCGTATGTGGTAGTCTATTTGAAAT 58.212 34.615 0.00 0.00 0.00 2.17
3171 12562 7.924412 TCCGTATGTGGTAGTCTATTTGAAATC 59.076 37.037 0.00 0.00 0.00 2.17
3172 12563 7.709182 CCGTATGTGGTAGTCTATTTGAAATCA 59.291 37.037 0.00 0.00 0.00 2.57
3173 12564 8.540492 CGTATGTGGTAGTCTATTTGAAATCAC 58.460 37.037 0.00 0.00 0.00 3.06
3174 12565 9.601217 GTATGTGGTAGTCTATTTGAAATCACT 57.399 33.333 0.00 0.88 29.94 3.41
3202 12593 8.581253 AAAGACAAATATTTAGGAACAGAGGG 57.419 34.615 0.00 0.00 0.00 4.30
3203 12594 7.510675 AGACAAATATTTAGGAACAGAGGGA 57.489 36.000 0.00 0.00 0.00 4.20
3207 12598 8.265764 ACAAATATTTAGGAACAGAGGGAGTAC 58.734 37.037 0.00 0.00 0.00 2.73
3253 12644 7.859325 ACATTAAAGCAGTGTAACCGATAAT 57.141 32.000 0.00 0.00 37.80 1.28
3268 12659 7.915293 AACCGATAATCAGTGATAACAACAA 57.085 32.000 5.94 0.00 0.00 2.83
3290 12681 3.497297 TCAACATCACAGCATTGCATC 57.503 42.857 11.91 0.00 0.00 3.91
3293 12684 2.443416 ACATCACAGCATTGCATCACT 58.557 42.857 11.91 0.00 0.00 3.41
3294 12685 2.163613 ACATCACAGCATTGCATCACTG 59.836 45.455 11.91 8.38 36.22 3.66
3299 12705 3.189910 CACAGCATTGCATCACTGTACTT 59.810 43.478 11.91 0.00 41.28 2.24
3430 12838 4.272489 ACATTGTATCCCTGTTCCATGTG 58.728 43.478 0.00 0.00 0.00 3.21
3438 12846 1.745087 CCTGTTCCATGTGCATACCAC 59.255 52.381 0.00 0.00 44.90 4.16
3483 12891 2.000447 GCAAGATCTTCGTAAACCGCT 59.000 47.619 4.57 0.00 36.19 5.52
3547 12956 5.121298 CCTTTTTGTACTAAGCCCGTAAGAC 59.879 44.000 0.00 0.00 43.02 3.01
3560 12969 5.418840 AGCCCGTAAGACAAATCAAATGATT 59.581 36.000 2.83 2.83 43.30 2.57
3570 12979 7.778853 AGACAAATCAAATGATTATCTGAGCCT 59.221 33.333 16.28 7.68 43.41 4.58
3652 13064 5.376756 ACCCAAACCAAGTAACTAGTGAA 57.623 39.130 0.00 0.00 0.00 3.18
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.243234 CGTTTTGTGGTCCTTGTTATGCA 60.243 43.478 0.00 0.00 0.00 3.96
3 4 2.952978 TGCGTTTTGTGGTCCTTGTTAT 59.047 40.909 0.00 0.00 0.00 1.89
4 5 2.366533 TGCGTTTTGTGGTCCTTGTTA 58.633 42.857 0.00 0.00 0.00 2.41
5 6 1.178276 TGCGTTTTGTGGTCCTTGTT 58.822 45.000 0.00 0.00 0.00 2.83
6 7 1.178276 TTGCGTTTTGTGGTCCTTGT 58.822 45.000 0.00 0.00 0.00 3.16
7 8 2.285827 TTTGCGTTTTGTGGTCCTTG 57.714 45.000 0.00 0.00 0.00 3.61
8 9 4.657436 TTATTTGCGTTTTGTGGTCCTT 57.343 36.364 0.00 0.00 0.00 3.36
9 10 4.142138 TGTTTATTTGCGTTTTGTGGTCCT 60.142 37.500 0.00 0.00 0.00 3.85
10 11 4.113354 TGTTTATTTGCGTTTTGTGGTCC 58.887 39.130 0.00 0.00 0.00 4.46
11 12 5.898630 ATGTTTATTTGCGTTTTGTGGTC 57.101 34.783 0.00 0.00 0.00 4.02
12 13 6.508777 ACTATGTTTATTTGCGTTTTGTGGT 58.491 32.000 0.00 0.00 0.00 4.16
13 14 7.401484 AACTATGTTTATTTGCGTTTTGTGG 57.599 32.000 0.00 0.00 0.00 4.17
14 15 9.695884 AAAAACTATGTTTATTTGCGTTTTGTG 57.304 25.926 0.00 0.00 34.51 3.33
15 16 9.695884 CAAAAACTATGTTTATTTGCGTTTTGT 57.304 25.926 0.00 0.00 34.51 2.83
16 17 8.668934 GCAAAAACTATGTTTATTTGCGTTTTG 58.331 29.630 13.25 0.00 44.11 2.44
17 18 8.760703 GCAAAAACTATGTTTATTTGCGTTTT 57.239 26.923 13.25 0.00 44.11 2.43
27 28 8.973378 GCACTATGTTTGCAAAAACTATGTTTA 58.027 29.630 14.67 0.00 39.93 2.01
28 29 7.710475 AGCACTATGTTTGCAAAAACTATGTTT 59.290 29.630 14.67 0.00 42.83 2.83
29 30 7.209475 AGCACTATGTTTGCAAAAACTATGTT 58.791 30.769 14.67 5.57 42.83 2.71
30 31 6.748132 AGCACTATGTTTGCAAAAACTATGT 58.252 32.000 14.67 5.79 42.83 2.29
31 32 8.800972 CATAGCACTATGTTTGCAAAAACTATG 58.199 33.333 14.67 15.85 42.83 2.23
32 33 8.739039 TCATAGCACTATGTTTGCAAAAACTAT 58.261 29.630 14.67 8.35 42.83 2.12
33 34 8.105097 TCATAGCACTATGTTTGCAAAAACTA 57.895 30.769 14.67 6.29 42.83 2.24
34 35 6.980593 TCATAGCACTATGTTTGCAAAAACT 58.019 32.000 14.67 4.07 42.83 2.66
35 36 7.636259 TTCATAGCACTATGTTTGCAAAAAC 57.364 32.000 14.67 3.59 42.83 2.43
36 37 9.571810 CTATTCATAGCACTATGTTTGCAAAAA 57.428 29.630 14.67 9.42 42.83 1.94
37 38 8.190122 CCTATTCATAGCACTATGTTTGCAAAA 58.810 33.333 14.67 5.00 42.83 2.44
38 39 7.339212 ACCTATTCATAGCACTATGTTTGCAAA 59.661 33.333 8.05 8.05 42.83 3.68
39 40 6.828273 ACCTATTCATAGCACTATGTTTGCAA 59.172 34.615 15.44 0.00 42.83 4.08
40 41 6.356556 ACCTATTCATAGCACTATGTTTGCA 58.643 36.000 15.44 0.00 42.83 4.08
41 42 6.073003 GGACCTATTCATAGCACTATGTTTGC 60.073 42.308 15.44 0.00 42.57 3.68
42 43 6.146184 CGGACCTATTCATAGCACTATGTTTG 59.854 42.308 15.44 7.37 42.57 2.93
43 44 6.041637 TCGGACCTATTCATAGCACTATGTTT 59.958 38.462 15.44 8.33 42.57 2.83
44 45 5.538813 TCGGACCTATTCATAGCACTATGTT 59.461 40.000 15.44 8.61 42.57 2.71
45 46 5.077564 TCGGACCTATTCATAGCACTATGT 58.922 41.667 15.44 2.61 42.57 2.29
46 47 5.644977 TCGGACCTATTCATAGCACTATG 57.355 43.478 10.79 10.79 43.16 2.23
47 48 6.859112 AATCGGACCTATTCATAGCACTAT 57.141 37.500 0.00 0.00 0.00 2.12
48 49 6.665992 AAATCGGACCTATTCATAGCACTA 57.334 37.500 0.00 0.00 0.00 2.74
49 50 5.552870 AAATCGGACCTATTCATAGCACT 57.447 39.130 0.00 0.00 0.00 4.40
50 51 7.276658 CAGATAAATCGGACCTATTCATAGCAC 59.723 40.741 0.00 0.00 0.00 4.40
51 52 7.039011 ACAGATAAATCGGACCTATTCATAGCA 60.039 37.037 0.00 0.00 0.00 3.49
52 53 7.324178 ACAGATAAATCGGACCTATTCATAGC 58.676 38.462 0.00 0.00 0.00 2.97
53 54 9.790389 GTACAGATAAATCGGACCTATTCATAG 57.210 37.037 0.00 0.00 0.00 2.23
54 55 9.304335 TGTACAGATAAATCGGACCTATTCATA 57.696 33.333 0.00 0.00 0.00 2.15
55 56 8.190326 TGTACAGATAAATCGGACCTATTCAT 57.810 34.615 0.00 0.00 0.00 2.57
56 57 7.591421 TGTACAGATAAATCGGACCTATTCA 57.409 36.000 0.00 0.00 0.00 2.57
57 58 9.141400 GAATGTACAGATAAATCGGACCTATTC 57.859 37.037 0.33 0.00 0.00 1.75
58 59 8.871125 AGAATGTACAGATAAATCGGACCTATT 58.129 33.333 0.33 0.00 0.00 1.73
59 60 8.423906 AGAATGTACAGATAAATCGGACCTAT 57.576 34.615 0.33 0.00 0.00 2.57
60 61 7.308408 CGAGAATGTACAGATAAATCGGACCTA 60.308 40.741 0.33 0.00 0.00 3.08
61 62 6.515200 CGAGAATGTACAGATAAATCGGACCT 60.515 42.308 0.33 0.00 0.00 3.85
62 63 5.629849 CGAGAATGTACAGATAAATCGGACC 59.370 44.000 0.33 0.00 0.00 4.46
63 64 6.436261 TCGAGAATGTACAGATAAATCGGAC 58.564 40.000 0.33 0.00 0.00 4.79
64 65 6.628919 TCGAGAATGTACAGATAAATCGGA 57.371 37.500 0.33 0.00 0.00 4.55
65 66 8.965986 TTATCGAGAATGTACAGATAAATCGG 57.034 34.615 10.47 0.00 32.78 4.18
94 95 4.222114 GCCAATTTATCGCTATGACAAGC 58.778 43.478 1.01 1.01 39.21 4.01
95 96 4.320494 GGGCCAATTTATCGCTATGACAAG 60.320 45.833 4.39 0.00 0.00 3.16
96 97 3.568007 GGGCCAATTTATCGCTATGACAA 59.432 43.478 4.39 0.00 0.00 3.18
97 98 3.146066 GGGCCAATTTATCGCTATGACA 58.854 45.455 4.39 0.00 0.00 3.58
98 99 3.146066 TGGGCCAATTTATCGCTATGAC 58.854 45.455 2.13 0.00 0.00 3.06
99 100 3.500448 TGGGCCAATTTATCGCTATGA 57.500 42.857 2.13 0.00 0.00 2.15
100 101 4.298332 GTTTGGGCCAATTTATCGCTATG 58.702 43.478 21.65 0.00 0.00 2.23
101 102 3.004315 CGTTTGGGCCAATTTATCGCTAT 59.996 43.478 21.65 0.00 0.00 2.97
102 103 2.356382 CGTTTGGGCCAATTTATCGCTA 59.644 45.455 21.65 0.00 0.00 4.26
103 104 1.134175 CGTTTGGGCCAATTTATCGCT 59.866 47.619 21.65 0.00 0.00 4.93
104 105 1.133407 TCGTTTGGGCCAATTTATCGC 59.867 47.619 21.65 3.99 0.00 4.58
105 106 3.708563 ATCGTTTGGGCCAATTTATCG 57.291 42.857 21.65 18.13 0.00 2.92
106 107 6.334202 TGTTTATCGTTTGGGCCAATTTATC 58.666 36.000 21.65 7.68 0.00 1.75
107 108 6.071051 ACTGTTTATCGTTTGGGCCAATTTAT 60.071 34.615 21.65 15.18 0.00 1.40
108 109 5.244178 ACTGTTTATCGTTTGGGCCAATTTA 59.756 36.000 21.65 8.60 0.00 1.40
109 110 4.039852 ACTGTTTATCGTTTGGGCCAATTT 59.960 37.500 21.65 7.82 0.00 1.82
110 111 3.576550 ACTGTTTATCGTTTGGGCCAATT 59.423 39.130 21.65 8.19 0.00 2.32
111 112 3.161866 ACTGTTTATCGTTTGGGCCAAT 58.838 40.909 21.65 7.64 0.00 3.16
112 113 2.588620 ACTGTTTATCGTTTGGGCCAA 58.411 42.857 16.66 16.66 0.00 4.52
113 114 2.279935 ACTGTTTATCGTTTGGGCCA 57.720 45.000 0.00 0.00 0.00 5.36
114 115 4.456566 TCTTTACTGTTTATCGTTTGGGCC 59.543 41.667 0.00 0.00 0.00 5.80
115 116 5.616488 TCTTTACTGTTTATCGTTTGGGC 57.384 39.130 0.00 0.00 0.00 5.36
116 117 8.395633 CCTTATCTTTACTGTTTATCGTTTGGG 58.604 37.037 0.00 0.00 0.00 4.12
117 118 7.908601 GCCTTATCTTTACTGTTTATCGTTTGG 59.091 37.037 0.00 0.00 0.00 3.28
118 119 8.447833 TGCCTTATCTTTACTGTTTATCGTTTG 58.552 33.333 0.00 0.00 0.00 2.93
119 120 8.556213 TGCCTTATCTTTACTGTTTATCGTTT 57.444 30.769 0.00 0.00 0.00 3.60
120 121 8.732746 ATGCCTTATCTTTACTGTTTATCGTT 57.267 30.769 0.00 0.00 0.00 3.85
121 122 9.826574 TTATGCCTTATCTTTACTGTTTATCGT 57.173 29.630 0.00 0.00 0.00 3.73
134 135 9.717942 GTGACTGATAAGATTATGCCTTATCTT 57.282 33.333 18.11 12.43 46.24 2.40
135 136 8.317679 GGTGACTGATAAGATTATGCCTTATCT 58.682 37.037 18.11 3.65 46.24 1.98
136 137 7.550906 GGGTGACTGATAAGATTATGCCTTATC 59.449 40.741 13.16 13.16 46.26 1.75
137 138 7.398024 GGGTGACTGATAAGATTATGCCTTAT 58.602 38.462 0.00 0.00 38.96 1.73
138 139 6.239887 GGGGTGACTGATAAGATTATGCCTTA 60.240 42.308 0.00 0.00 0.00 2.69
139 140 5.456763 GGGGTGACTGATAAGATTATGCCTT 60.457 44.000 0.00 0.00 0.00 4.35
140 141 4.042187 GGGGTGACTGATAAGATTATGCCT 59.958 45.833 0.00 0.00 0.00 4.75
141 142 4.202461 TGGGGTGACTGATAAGATTATGCC 60.202 45.833 0.00 0.00 0.00 4.40
142 143 4.973168 TGGGGTGACTGATAAGATTATGC 58.027 43.478 0.00 0.00 0.00 3.14
143 144 6.830912 TCTTGGGGTGACTGATAAGATTATG 58.169 40.000 0.00 0.00 0.00 1.90
144 145 6.617371 ACTCTTGGGGTGACTGATAAGATTAT 59.383 38.462 0.00 0.00 0.00 1.28
145 146 5.964477 ACTCTTGGGGTGACTGATAAGATTA 59.036 40.000 0.00 0.00 0.00 1.75
146 147 4.785376 ACTCTTGGGGTGACTGATAAGATT 59.215 41.667 0.00 0.00 0.00 2.40
147 148 4.366267 ACTCTTGGGGTGACTGATAAGAT 58.634 43.478 0.00 0.00 0.00 2.40
148 149 3.791320 ACTCTTGGGGTGACTGATAAGA 58.209 45.455 0.00 0.00 0.00 2.10
149 150 4.442192 GCTACTCTTGGGGTGACTGATAAG 60.442 50.000 0.00 0.00 0.00 1.73
150 151 3.451178 GCTACTCTTGGGGTGACTGATAA 59.549 47.826 0.00 0.00 0.00 1.75
151 152 3.031736 GCTACTCTTGGGGTGACTGATA 58.968 50.000 0.00 0.00 0.00 2.15
152 153 1.834263 GCTACTCTTGGGGTGACTGAT 59.166 52.381 0.00 0.00 0.00 2.90
153 154 1.267121 GCTACTCTTGGGGTGACTGA 58.733 55.000 0.00 0.00 0.00 3.41
154 155 0.976641 TGCTACTCTTGGGGTGACTG 59.023 55.000 0.00 0.00 0.00 3.51
155 156 1.729586 TTGCTACTCTTGGGGTGACT 58.270 50.000 0.00 0.00 0.00 3.41
156 157 2.789409 ATTGCTACTCTTGGGGTGAC 57.211 50.000 0.00 0.00 0.00 3.67
157 158 4.919774 TTTATTGCTACTCTTGGGGTGA 57.080 40.909 0.00 0.00 0.00 4.02
158 159 5.192927 TGATTTATTGCTACTCTTGGGGTG 58.807 41.667 0.00 0.00 0.00 4.61
159 160 5.450818 TGATTTATTGCTACTCTTGGGGT 57.549 39.130 0.00 0.00 0.00 4.95
160 161 6.564328 GTTTGATTTATTGCTACTCTTGGGG 58.436 40.000 0.00 0.00 0.00 4.96
161 162 6.093495 TCGTTTGATTTATTGCTACTCTTGGG 59.907 38.462 0.00 0.00 0.00 4.12
162 163 7.072177 TCGTTTGATTTATTGCTACTCTTGG 57.928 36.000 0.00 0.00 0.00 3.61
168 169 8.743099 GCCTTTTATCGTTTGATTTATTGCTAC 58.257 33.333 0.00 0.00 35.99 3.58
169 170 8.682710 AGCCTTTTATCGTTTGATTTATTGCTA 58.317 29.630 0.00 0.00 35.99 3.49
170 171 7.489113 CAGCCTTTTATCGTTTGATTTATTGCT 59.511 33.333 0.00 0.00 35.99 3.91
171 172 7.487829 TCAGCCTTTTATCGTTTGATTTATTGC 59.512 33.333 0.00 0.00 35.99 3.56
172 173 8.909708 TCAGCCTTTTATCGTTTGATTTATTG 57.090 30.769 0.00 0.00 35.99 1.90
174 175 9.736023 GATTCAGCCTTTTATCGTTTGATTTAT 57.264 29.630 0.00 0.00 35.99 1.40
175 176 7.908082 CGATTCAGCCTTTTATCGTTTGATTTA 59.092 33.333 0.00 0.00 36.17 1.40
176 177 6.747280 CGATTCAGCCTTTTATCGTTTGATTT 59.253 34.615 0.00 0.00 36.17 2.17
177 178 6.258160 CGATTCAGCCTTTTATCGTTTGATT 58.742 36.000 0.00 0.00 36.17 2.57
178 179 5.220854 CCGATTCAGCCTTTTATCGTTTGAT 60.221 40.000 0.00 0.00 38.48 2.57
179 180 4.094294 CCGATTCAGCCTTTTATCGTTTGA 59.906 41.667 0.00 0.00 38.48 2.69
180 181 4.094294 TCCGATTCAGCCTTTTATCGTTTG 59.906 41.667 0.00 0.00 38.48 2.93
181 182 4.258543 TCCGATTCAGCCTTTTATCGTTT 58.741 39.130 0.00 0.00 38.48 3.60
182 183 3.869065 TCCGATTCAGCCTTTTATCGTT 58.131 40.909 0.00 0.00 38.48 3.85
183 184 3.536956 TCCGATTCAGCCTTTTATCGT 57.463 42.857 0.00 0.00 38.48 3.73
184 185 4.119862 TCTTCCGATTCAGCCTTTTATCG 58.880 43.478 0.00 0.00 39.52 2.92
185 186 6.625873 AATCTTCCGATTCAGCCTTTTATC 57.374 37.500 0.00 0.00 34.88 1.75
186 187 7.410120 AAAATCTTCCGATTCAGCCTTTTAT 57.590 32.000 0.00 0.00 38.89 1.40
187 188 6.834168 AAAATCTTCCGATTCAGCCTTTTA 57.166 33.333 0.00 0.00 38.89 1.52
188 189 5.728637 AAAATCTTCCGATTCAGCCTTTT 57.271 34.783 0.00 0.00 38.89 2.27
189 190 5.728637 AAAAATCTTCCGATTCAGCCTTT 57.271 34.783 0.00 0.00 38.89 3.11
208 209 9.308318 GTTTAATTGTTGCTCTAGGTTCAAAAA 57.692 29.630 0.00 0.00 0.00 1.94
209 210 7.646130 CGTTTAATTGTTGCTCTAGGTTCAAAA 59.354 33.333 0.00 0.00 0.00 2.44
210 211 7.012515 TCGTTTAATTGTTGCTCTAGGTTCAAA 59.987 33.333 0.00 0.00 0.00 2.69
211 212 6.483974 TCGTTTAATTGTTGCTCTAGGTTCAA 59.516 34.615 0.00 0.00 0.00 2.69
212 213 5.992829 TCGTTTAATTGTTGCTCTAGGTTCA 59.007 36.000 0.00 0.00 0.00 3.18
213 214 6.402226 CCTCGTTTAATTGTTGCTCTAGGTTC 60.402 42.308 0.00 0.00 0.00 3.62
214 215 5.411669 CCTCGTTTAATTGTTGCTCTAGGTT 59.588 40.000 0.00 0.00 0.00 3.50
215 216 4.935808 CCTCGTTTAATTGTTGCTCTAGGT 59.064 41.667 0.00 0.00 0.00 3.08
242 243 1.555533 CCACTTAGAGGAGGAACCCAC 59.444 57.143 0.00 0.00 40.05 4.61
244 245 2.249309 TCCACTTAGAGGAGGAACCC 57.751 55.000 0.00 0.00 40.05 4.11
275 276 4.704540 TCATCGAAGCCCACATAAATGTTT 59.295 37.500 0.00 0.00 39.39 2.83
282 283 2.965147 TCTCATCATCGAAGCCCACATA 59.035 45.455 0.00 0.00 0.00 2.29
286 287 1.541889 GCATCTCATCATCGAAGCCCA 60.542 52.381 0.00 0.00 0.00 5.36
289 290 2.752121 TGAGCATCTCATCATCGAAGC 58.248 47.619 0.00 0.00 35.39 3.86
301 302 2.615493 CCCGTTGTACCTTTGAGCATCT 60.615 50.000 0.00 0.00 34.92 2.90
310 311 1.903860 TGATAGCACCCGTTGTACCTT 59.096 47.619 0.00 0.00 0.00 3.50
343 344 6.500684 TTCCAGCAGCTATAAACTTTCTTG 57.499 37.500 0.00 0.00 0.00 3.02
359 360 6.041637 ACCAATCTATACGACTATTTCCAGCA 59.958 38.462 0.00 0.00 0.00 4.41
361 362 6.366332 GCACCAATCTATACGACTATTTCCAG 59.634 42.308 0.00 0.00 0.00 3.86
371 374 4.584743 ACATCTGAGCACCAATCTATACGA 59.415 41.667 0.00 0.00 0.00 3.43
372 375 4.876125 ACATCTGAGCACCAATCTATACG 58.124 43.478 0.00 0.00 0.00 3.06
390 393 1.003233 ACCTCCACGGAAAGGAACATC 59.997 52.381 6.28 0.00 36.46 3.06
397 400 0.955919 GCCTGAACCTCCACGGAAAG 60.956 60.000 0.00 0.00 36.31 2.62
400 403 1.415672 AAAGCCTGAACCTCCACGGA 61.416 55.000 0.00 0.00 36.31 4.69
402 405 2.178912 TTAAAGCCTGAACCTCCACG 57.821 50.000 0.00 0.00 0.00 4.94
403 406 3.487372 ACTTTAAAGCCTGAACCTCCAC 58.513 45.455 15.24 0.00 0.00 4.02
404 407 3.394606 AGACTTTAAAGCCTGAACCTCCA 59.605 43.478 15.24 0.00 0.00 3.86
417 420 6.038936 GTGCCAAAGTTAGTCCAGACTTTAAA 59.961 38.462 5.49 0.00 42.47 1.52
425 428 3.191371 GGATTGTGCCAAAGTTAGTCCAG 59.809 47.826 0.00 0.00 0.00 3.86
443 446 4.944930 CCAATTTGTTGCATCCAATGGATT 59.055 37.500 12.91 0.00 39.79 3.01
444 447 4.019141 ACCAATTTGTTGCATCCAATGGAT 60.019 37.500 9.36 9.36 44.21 3.41
462 465 6.153340 CCAGATTGTCAGAATTAACCACCAAT 59.847 38.462 0.00 0.00 0.00 3.16
479 482 7.402054 TGTTATGGTAATCAACTCCAGATTGT 58.598 34.615 0.00 0.00 36.45 2.71
486 489 8.244113 CCTTCTTTTGTTATGGTAATCAACTCC 58.756 37.037 0.00 0.00 0.00 3.85
487 490 8.793592 ACCTTCTTTTGTTATGGTAATCAACTC 58.206 33.333 0.00 0.00 0.00 3.01
488 491 8.576442 CACCTTCTTTTGTTATGGTAATCAACT 58.424 33.333 0.00 0.00 0.00 3.16
489 492 7.328493 GCACCTTCTTTTGTTATGGTAATCAAC 59.672 37.037 0.00 0.00 0.00 3.18
490 493 7.014711 TGCACCTTCTTTTGTTATGGTAATCAA 59.985 33.333 0.00 0.00 0.00 2.57
491 494 6.491745 TGCACCTTCTTTTGTTATGGTAATCA 59.508 34.615 0.00 0.00 0.00 2.57
493 496 6.909550 TGCACCTTCTTTTGTTATGGTAAT 57.090 33.333 0.00 0.00 0.00 1.89
500 505 5.890334 CAGAGTTTGCACCTTCTTTTGTTA 58.110 37.500 0.00 0.00 0.00 2.41
518 523 2.270205 CCGAAGCCCATGCAGAGT 59.730 61.111 0.00 0.00 41.13 3.24
521 526 2.753043 AAGCCGAAGCCCATGCAG 60.753 61.111 0.00 0.00 41.25 4.41
526 531 1.337118 AAAATTGAAGCCGAAGCCCA 58.663 45.000 0.00 0.00 41.25 5.36
546 551 4.513198 TGACATGTCATAACAGTCGTCA 57.487 40.909 24.56 0.00 39.10 4.35
587 593 5.147330 TCTCTAGGACAATGCTCGAAAAA 57.853 39.130 0.00 0.00 0.00 1.94
633 639 5.710099 CCACAGAACCTTTTTAATCTAGCCA 59.290 40.000 0.00 0.00 0.00 4.75
639 645 8.290325 CACTAGAACCACAGAACCTTTTTAATC 58.710 37.037 0.00 0.00 0.00 1.75
644 650 5.112129 ACACTAGAACCACAGAACCTTTT 57.888 39.130 0.00 0.00 0.00 2.27
645 651 4.772886 ACACTAGAACCACAGAACCTTT 57.227 40.909 0.00 0.00 0.00 3.11
646 652 4.772886 AACACTAGAACCACAGAACCTT 57.227 40.909 0.00 0.00 0.00 3.50
648 654 3.564225 CCAAACACTAGAACCACAGAACC 59.436 47.826 0.00 0.00 0.00 3.62
657 663 6.150140 AGCTTCATTCATCCAAACACTAGAAC 59.850 38.462 0.00 0.00 0.00 3.01
662 668 3.760684 GGAGCTTCATTCATCCAAACACT 59.239 43.478 0.00 0.00 0.00 3.55
685 691 4.276926 ACAAGAAGAGCTGTGATTGAAACC 59.723 41.667 13.33 0.00 0.00 3.27
691 697 3.997021 CGGTTACAAGAAGAGCTGTGATT 59.003 43.478 0.00 0.00 0.00 2.57
697 703 2.028112 TGCATCGGTTACAAGAAGAGCT 60.028 45.455 0.00 0.00 0.00 4.09
698 704 2.346803 TGCATCGGTTACAAGAAGAGC 58.653 47.619 0.00 0.00 0.00 4.09
699 705 3.745975 TGTTGCATCGGTTACAAGAAGAG 59.254 43.478 0.00 0.00 0.00 2.85
853 859 3.400255 GCTTCTTCGGTTAACCTGTCTT 58.600 45.455 22.12 0.00 0.00 3.01
855 861 2.074576 GGCTTCTTCGGTTAACCTGTC 58.925 52.381 22.12 3.74 0.00 3.51
899 905 2.040544 CCGGGCTGGCTTTGTACAG 61.041 63.158 0.00 0.00 37.76 2.74
900 906 2.033448 CCGGGCTGGCTTTGTACA 59.967 61.111 0.00 0.00 0.00 2.90
912 920 1.526225 GTCTCTAATTGGGCCGGGC 60.526 63.158 22.00 22.00 0.00 6.13
935 943 1.592400 CGACCTGGTTCTAGCCGTCA 61.592 60.000 0.00 0.00 0.00 4.35
1634 3391 1.548357 ATCTTGCGGCTCCACTCACT 61.548 55.000 0.00 0.00 0.00 3.41
1647 3404 1.285578 GCTCCGAACAGAGATCTTGC 58.714 55.000 0.00 0.00 35.82 4.01
1766 3523 3.329386 TCACAGATAGTTGTTGCTCAGC 58.671 45.455 0.00 0.00 0.00 4.26
1767 3524 5.173664 TGATCACAGATAGTTGTTGCTCAG 58.826 41.667 0.00 0.00 0.00 3.35
1999 6114 3.189010 GAAACCAACCGCCCACACG 62.189 63.158 0.00 0.00 0.00 4.49
2017 6132 3.381333 GACCCTAACCCCTTCCGCG 62.381 68.421 0.00 0.00 0.00 6.46
2020 6135 1.894699 AGATGACCCTAACCCCTTCC 58.105 55.000 0.00 0.00 0.00 3.46
2026 6141 3.375699 TCTGAGGAAGATGACCCTAACC 58.624 50.000 0.00 0.00 31.84 2.85
2035 6150 2.009042 GCCGGTGTTCTGAGGAAGATG 61.009 57.143 1.90 0.00 33.93 2.90
2074 6189 3.007506 TGTTGACTCGGCCTGAATTAAGA 59.992 43.478 0.00 0.00 0.00 2.10
2109 6224 3.484407 GGCATGACCTTCTCAATGCTAT 58.516 45.455 0.00 0.00 35.45 2.97
2119 6234 0.535335 TCGTGTAGGGCATGACCTTC 59.465 55.000 29.21 22.56 42.09 3.46
2171 6289 4.351192 ACGAATGTGTTTGAGAAAACAGC 58.649 39.130 4.35 1.88 42.63 4.40
2179 6297 6.073276 TCCATAAGTTGACGAATGTGTTTGAG 60.073 38.462 0.00 0.00 0.00 3.02
2192 6310 6.238022 GGCGTATTTACTGTCCATAAGTTGAC 60.238 42.308 0.00 0.00 0.00 3.18
2197 6315 5.118664 CGATGGCGTATTTACTGTCCATAAG 59.881 44.000 0.00 0.00 34.74 1.73
2214 6332 3.384668 ACTGAAATAGTGATCGATGGCG 58.615 45.455 0.54 0.00 38.49 5.69
2236 6354 6.170675 ACGATCTAAGCTACAAGCAAAAAG 57.829 37.500 1.22 0.00 45.56 2.27
2265 6383 7.827819 TCAGATGAACTTAAACTATCCAACG 57.172 36.000 0.00 0.00 0.00 4.10
2270 6388 8.555361 GGCTTGATCAGATGAACTTAAACTATC 58.445 37.037 0.00 0.00 0.00 2.08
2272 6390 7.624549 AGGCTTGATCAGATGAACTTAAACTA 58.375 34.615 0.00 0.00 0.00 2.24
2273 6391 6.479884 AGGCTTGATCAGATGAACTTAAACT 58.520 36.000 0.00 0.00 0.00 2.66
2274 6392 6.749923 AGGCTTGATCAGATGAACTTAAAC 57.250 37.500 0.00 0.00 0.00 2.01
2276 6394 6.716628 ACAAAGGCTTGATCAGATGAACTTAA 59.283 34.615 0.00 0.00 36.33 1.85
2277 6395 6.240894 ACAAAGGCTTGATCAGATGAACTTA 58.759 36.000 0.00 0.00 36.33 2.24
2279 6397 4.660168 ACAAAGGCTTGATCAGATGAACT 58.340 39.130 0.00 0.00 36.33 3.01
2280 6398 4.699257 AGACAAAGGCTTGATCAGATGAAC 59.301 41.667 0.00 0.00 36.33 3.18
2281 6399 4.698780 CAGACAAAGGCTTGATCAGATGAA 59.301 41.667 0.00 0.00 36.33 2.57
2372 11604 1.626654 CTCGATGGTCACACCGTTGC 61.627 60.000 0.00 0.00 42.58 4.17
2374 11606 0.038526 GTCTCGATGGTCACACCGTT 60.039 55.000 0.00 0.00 42.58 4.44
2399 11659 6.295719 TGGGAGGAAAAAGTAGACAGATAC 57.704 41.667 0.00 0.00 0.00 2.24
2400 11660 5.425539 CCTGGGAGGAAAAAGTAGACAGATA 59.574 44.000 0.00 0.00 37.67 1.98
2445 11705 0.321671 GCAGCAGAAGACACCCACTA 59.678 55.000 0.00 0.00 0.00 2.74
2446 11706 1.072159 GCAGCAGAAGACACCCACT 59.928 57.895 0.00 0.00 0.00 4.00
2469 11729 2.061509 ACACCAAACTACCCAACACC 57.938 50.000 0.00 0.00 0.00 4.16
2487 11747 4.913335 TGAACGTCCACCATAGAGATAC 57.087 45.455 0.00 0.00 0.00 2.24
2501 11766 4.322804 CGACCAGTACTACAAATGAACGTC 59.677 45.833 0.00 0.00 0.00 4.34
2503 11768 4.089493 CACGACCAGTACTACAAATGAACG 59.911 45.833 0.00 0.00 0.00 3.95
2505 11770 3.991773 GCACGACCAGTACTACAAATGAA 59.008 43.478 0.00 0.00 0.00 2.57
2506 11771 3.581755 GCACGACCAGTACTACAAATGA 58.418 45.455 0.00 0.00 0.00 2.57
2508 11773 2.354403 GGGCACGACCAGTACTACAAAT 60.354 50.000 0.00 0.00 42.05 2.32
2509 11774 1.001181 GGGCACGACCAGTACTACAAA 59.999 52.381 0.00 0.00 42.05 2.83
2512 11777 0.893447 AAGGGCACGACCAGTACTAC 59.107 55.000 0.00 0.00 42.05 2.73
2513 11778 1.636148 AAAGGGCACGACCAGTACTA 58.364 50.000 0.00 0.00 42.05 1.82
2514 11779 0.763035 AAAAGGGCACGACCAGTACT 59.237 50.000 0.00 0.00 42.05 2.73
2515 11780 0.872388 CAAAAGGGCACGACCAGTAC 59.128 55.000 0.00 0.00 42.05 2.73
2517 11782 2.193536 GCAAAAGGGCACGACCAGT 61.194 57.895 0.00 0.00 42.05 4.00
2518 11783 2.644992 GCAAAAGGGCACGACCAG 59.355 61.111 0.00 0.00 42.05 4.00
2519 11784 2.909965 GGCAAAAGGGCACGACCA 60.910 61.111 0.00 0.00 42.05 4.02
2520 11785 2.597510 AGGCAAAAGGGCACGACC 60.598 61.111 0.00 0.00 46.44 4.79
2521 11786 1.452145 TTCAGGCAAAAGGGCACGAC 61.452 55.000 0.00 0.00 46.44 4.34
2522 11787 1.152860 TTCAGGCAAAAGGGCACGA 60.153 52.632 0.00 0.00 46.44 4.35
2524 11789 0.032540 CAGTTCAGGCAAAAGGGCAC 59.967 55.000 0.00 0.00 46.44 5.01
2526 11791 0.827507 TCCAGTTCAGGCAAAAGGGC 60.828 55.000 0.00 0.00 43.80 5.19
2527 11792 1.251251 CTCCAGTTCAGGCAAAAGGG 58.749 55.000 0.00 0.00 0.00 3.95
2528 11793 1.986882 ACTCCAGTTCAGGCAAAAGG 58.013 50.000 0.00 0.00 0.00 3.11
2529 11794 3.057946 GCTAACTCCAGTTCAGGCAAAAG 60.058 47.826 0.00 0.00 39.31 2.27
2530 11795 2.884639 GCTAACTCCAGTTCAGGCAAAA 59.115 45.455 0.00 0.00 39.31 2.44
2543 11808 3.565902 ACAACTCAAGCAAAGCTAACTCC 59.434 43.478 0.00 0.00 38.25 3.85
2551 11816 1.746760 GACGCACAACTCAAGCAAAG 58.253 50.000 0.00 0.00 0.00 2.77
2559 11824 0.383124 GCTCAAACGACGCACAACTC 60.383 55.000 0.00 0.00 0.00 3.01
2570 11838 1.600957 CATAGATGCCCTGCTCAAACG 59.399 52.381 0.00 0.00 0.00 3.60
2596 11887 3.303791 GAGTTTGTGTTAACTCGCAAGGG 60.304 47.826 7.22 0.00 43.10 3.95
2603 11939 5.473796 TGAAACCGAGTTTGTGTTAACTC 57.526 39.130 7.22 3.79 46.72 3.01
2635 11974 5.129368 AGCTGTAAATCCACCCACATTAT 57.871 39.130 0.00 0.00 0.00 1.28
2705 12045 2.912771 TCCACAACTCGAGCAGAAAAA 58.087 42.857 13.61 0.00 0.00 1.94
2706 12046 2.613026 TCCACAACTCGAGCAGAAAA 57.387 45.000 13.61 0.00 0.00 2.29
2707 12047 2.839486 ATCCACAACTCGAGCAGAAA 57.161 45.000 13.61 0.00 0.00 2.52
2712 12052 2.656560 ACACTATCCACAACTCGAGC 57.343 50.000 13.61 0.00 0.00 5.03
2721 12061 8.132362 TGTTTTGACAATGTAAACACTATCCAC 58.868 33.333 9.61 0.00 36.98 4.02
2750 12090 7.920160 TGAGTAACATATGTCTGCAATTCAA 57.080 32.000 9.23 0.00 0.00 2.69
2771 12111 1.004504 GCCGCGCTTCTTTAGAATGAG 60.005 52.381 5.56 0.00 33.01 2.90
2798 12138 0.366871 CGCGATAGTGTCACTTGCAC 59.633 55.000 11.54 0.00 42.91 4.57
2809 12151 2.860009 TCCTAAGATGGTCGCGATAGT 58.140 47.619 14.06 0.00 39.35 2.12
2819 12161 7.817593 GCATCAGCTCCTCATCCTAAGATGG 62.818 52.000 1.48 0.00 43.05 3.51
2825 12167 2.092598 TGCATCAGCTCCTCATCCTA 57.907 50.000 0.00 0.00 42.74 2.94
2847 12189 8.821894 CCGGAAACAAAAATTTGAAGTTTATGA 58.178 29.630 12.54 0.00 40.55 2.15
2853 12196 7.011016 GTGAATCCGGAAACAAAAATTTGAAGT 59.989 33.333 9.01 0.00 40.55 3.01
2870 12213 0.740868 ACACTCATGCGTGAATCCGG 60.741 55.000 22.09 0.00 38.27 5.14
2878 12221 3.436704 CCTTATTGAACACACTCATGCGT 59.563 43.478 0.00 0.00 0.00 5.24
2879 12222 3.684305 TCCTTATTGAACACACTCATGCG 59.316 43.478 0.00 0.00 0.00 4.73
2880 12223 4.455533 TGTCCTTATTGAACACACTCATGC 59.544 41.667 0.00 0.00 0.00 4.06
2881 12224 5.469760 TGTGTCCTTATTGAACACACTCATG 59.530 40.000 3.60 0.00 46.03 3.07
2882 12225 5.620206 TGTGTCCTTATTGAACACACTCAT 58.380 37.500 3.60 0.00 46.03 2.90
2883 12226 5.029807 TGTGTCCTTATTGAACACACTCA 57.970 39.130 3.60 0.00 46.03 3.41
2911 12256 6.074088 CGTGCTCCTAGAAATGATACATGAAC 60.074 42.308 0.00 0.00 0.00 3.18
2930 12320 6.142817 ACTTCAATTTATGTGTTTCGTGCTC 58.857 36.000 0.00 0.00 0.00 4.26
2955 12345 2.432206 TTTGATTGTCGACGAGCAGA 57.568 45.000 21.96 16.19 0.00 4.26
2998 12389 8.421249 TGTAAAATTTTGATGGAAGATGGAGT 57.579 30.769 13.76 0.00 0.00 3.85
3013 12404 9.382275 AGTCTTCAAAGTTGCATGTAAAATTTT 57.618 25.926 8.75 8.75 0.00 1.82
3041 12432 7.072076 ACAAATATTTAGGAACGGAGGGAGTAT 59.928 37.037 0.00 0.00 0.00 2.12
3042 12433 6.384886 ACAAATATTTAGGAACGGAGGGAGTA 59.615 38.462 0.00 0.00 0.00 2.59
3043 12434 5.191124 ACAAATATTTAGGAACGGAGGGAGT 59.809 40.000 0.00 0.00 0.00 3.85
3044 12435 5.681639 ACAAATATTTAGGAACGGAGGGAG 58.318 41.667 0.00 0.00 0.00 4.30
3045 12436 5.427481 AGACAAATATTTAGGAACGGAGGGA 59.573 40.000 0.00 0.00 0.00 4.20
3046 12437 5.681639 AGACAAATATTTAGGAACGGAGGG 58.318 41.667 0.00 0.00 0.00 4.30
3047 12438 7.553044 AGAAAGACAAATATTTAGGAACGGAGG 59.447 37.037 0.00 0.00 0.00 4.30
3048 12439 8.494016 AGAAAGACAAATATTTAGGAACGGAG 57.506 34.615 0.00 0.00 0.00 4.63
3049 12440 9.595823 CTAGAAAGACAAATATTTAGGAACGGA 57.404 33.333 0.00 0.00 0.00 4.69
3050 12441 9.595823 TCTAGAAAGACAAATATTTAGGAACGG 57.404 33.333 0.00 0.00 0.00 4.44
3060 12451 9.793259 TGTTGAAACCTCTAGAAAGACAAATAT 57.207 29.630 0.00 0.00 0.00 1.28
3061 12452 9.621629 TTGTTGAAACCTCTAGAAAGACAAATA 57.378 29.630 0.00 0.00 0.00 1.40
3062 12453 8.519799 TTGTTGAAACCTCTAGAAAGACAAAT 57.480 30.769 0.00 0.00 0.00 2.32
3063 12454 7.610305 ACTTGTTGAAACCTCTAGAAAGACAAA 59.390 33.333 0.00 0.00 0.00 2.83
3064 12455 7.065803 CACTTGTTGAAACCTCTAGAAAGACAA 59.934 37.037 0.00 0.00 0.00 3.18
3065 12456 6.538742 CACTTGTTGAAACCTCTAGAAAGACA 59.461 38.462 0.00 0.00 0.00 3.41
3066 12457 6.761714 TCACTTGTTGAAACCTCTAGAAAGAC 59.238 38.462 0.00 0.00 0.00 3.01
3067 12458 6.761714 GTCACTTGTTGAAACCTCTAGAAAGA 59.238 38.462 0.00 0.00 35.39 2.52
3068 12459 6.763610 AGTCACTTGTTGAAACCTCTAGAAAG 59.236 38.462 0.00 0.00 35.39 2.62
3069 12460 6.650120 AGTCACTTGTTGAAACCTCTAGAAA 58.350 36.000 0.00 0.00 35.39 2.52
3070 12461 6.235231 AGTCACTTGTTGAAACCTCTAGAA 57.765 37.500 0.00 0.00 35.39 2.10
3071 12462 5.871396 AGTCACTTGTTGAAACCTCTAGA 57.129 39.130 0.00 0.00 35.39 2.43
3072 12463 6.513180 TGTAGTCACTTGTTGAAACCTCTAG 58.487 40.000 0.00 0.00 35.39 2.43
3073 12464 6.474140 TGTAGTCACTTGTTGAAACCTCTA 57.526 37.500 0.00 0.00 35.39 2.43
3074 12465 5.353394 TGTAGTCACTTGTTGAAACCTCT 57.647 39.130 0.00 0.00 35.39 3.69
3075 12466 6.128902 CGTATGTAGTCACTTGTTGAAACCTC 60.129 42.308 0.00 0.00 35.39 3.85
3076 12467 5.694910 CGTATGTAGTCACTTGTTGAAACCT 59.305 40.000 0.00 0.00 35.39 3.50
3077 12468 5.107220 CCGTATGTAGTCACTTGTTGAAACC 60.107 44.000 0.00 0.00 35.39 3.27
3078 12469 5.693104 TCCGTATGTAGTCACTTGTTGAAAC 59.307 40.000 0.00 0.00 35.39 2.78
3079 12470 5.845103 TCCGTATGTAGTCACTTGTTGAAA 58.155 37.500 0.00 0.00 35.39 2.69
3080 12471 5.456548 TCCGTATGTAGTCACTTGTTGAA 57.543 39.130 0.00 0.00 35.39 2.69
3081 12472 4.617530 GCTCCGTATGTAGTCACTTGTTGA 60.618 45.833 0.00 0.00 0.00 3.18
3082 12473 3.612860 GCTCCGTATGTAGTCACTTGTTG 59.387 47.826 0.00 0.00 0.00 3.33
3083 12474 3.257375 TGCTCCGTATGTAGTCACTTGTT 59.743 43.478 0.00 0.00 0.00 2.83
3084 12475 2.823747 TGCTCCGTATGTAGTCACTTGT 59.176 45.455 0.00 0.00 0.00 3.16
3085 12476 3.503827 TGCTCCGTATGTAGTCACTTG 57.496 47.619 0.00 0.00 0.00 3.16
3086 12477 4.530710 TTTGCTCCGTATGTAGTCACTT 57.469 40.909 0.00 0.00 0.00 3.16
3087 12478 4.530710 TTTTGCTCCGTATGTAGTCACT 57.469 40.909 0.00 0.00 0.00 3.41
3088 12479 4.868171 TCATTTTGCTCCGTATGTAGTCAC 59.132 41.667 0.00 0.00 0.00 3.67
3089 12480 5.079689 TCATTTTGCTCCGTATGTAGTCA 57.920 39.130 0.00 0.00 0.00 3.41
3090 12481 5.005779 CACTCATTTTGCTCCGTATGTAGTC 59.994 44.000 0.00 0.00 0.00 2.59
3091 12482 4.870426 CACTCATTTTGCTCCGTATGTAGT 59.130 41.667 0.00 0.00 0.00 2.73
3092 12483 5.109210 TCACTCATTTTGCTCCGTATGTAG 58.891 41.667 0.00 0.00 0.00 2.74
3093 12484 5.079689 TCACTCATTTTGCTCCGTATGTA 57.920 39.130 0.00 0.00 0.00 2.29
3094 12485 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
3095 12486 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
3096 12487 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
3097 12488 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
3098 12489 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
3099 12490 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
3100 12491 5.645497 AGTGTAGATTCACTCATTTTGCTCC 59.355 40.000 0.00 0.00 44.07 4.70
3101 12492 6.734104 AGTGTAGATTCACTCATTTTGCTC 57.266 37.500 0.00 0.00 44.07 4.26
3130 12521 9.642343 ACCACATACGGATGTATATAGACATAT 57.358 33.333 14.23 5.08 44.82 1.78
3132 12523 7.956328 ACCACATACGGATGTATATAGACAT 57.044 36.000 14.23 12.70 44.82 3.06
3133 12524 8.105197 ACTACCACATACGGATGTATATAGACA 58.895 37.037 22.62 2.07 44.82 3.41
3134 12525 8.503458 ACTACCACATACGGATGTATATAGAC 57.497 38.462 22.62 0.00 44.82 2.59
3135 12526 8.546322 AGACTACCACATACGGATGTATATAGA 58.454 37.037 22.62 5.04 44.82 1.98
3136 12527 8.734218 AGACTACCACATACGGATGTATATAG 57.266 38.462 14.23 16.35 44.82 1.31
3138 12529 9.696572 AATAGACTACCACATACGGATGTATAT 57.303 33.333 14.23 4.37 44.82 0.86
3139 12530 9.524496 AAATAGACTACCACATACGGATGTATA 57.476 33.333 14.23 8.27 44.82 1.47
3140 12531 8.304596 CAAATAGACTACCACATACGGATGTAT 58.695 37.037 14.23 7.46 44.82 2.29
3141 12532 7.503230 TCAAATAGACTACCACATACGGATGTA 59.497 37.037 14.23 0.00 44.82 2.29
3143 12534 6.745116 TCAAATAGACTACCACATACGGATG 58.255 40.000 5.94 5.94 39.16 3.51
3144 12535 6.971726 TCAAATAGACTACCACATACGGAT 57.028 37.500 0.00 0.00 0.00 4.18
3145 12536 6.778834 TTCAAATAGACTACCACATACGGA 57.221 37.500 0.00 0.00 0.00 4.69
3146 12537 7.709182 TGATTTCAAATAGACTACCACATACGG 59.291 37.037 0.00 0.00 0.00 4.02
3147 12538 8.540492 GTGATTTCAAATAGACTACCACATACG 58.460 37.037 0.00 0.00 0.00 3.06
3148 12539 9.601217 AGTGATTTCAAATAGACTACCACATAC 57.399 33.333 0.00 0.00 0.00 2.39
3176 12567 9.025041 CCCTCTGTTCCTAAATATTTGTCTTTT 57.975 33.333 11.05 0.00 0.00 2.27
3177 12568 8.390921 TCCCTCTGTTCCTAAATATTTGTCTTT 58.609 33.333 11.05 0.00 0.00 2.52
3178 12569 7.928873 TCCCTCTGTTCCTAAATATTTGTCTT 58.071 34.615 11.05 0.00 0.00 3.01
3179 12570 7.182930 ACTCCCTCTGTTCCTAAATATTTGTCT 59.817 37.037 11.05 0.00 0.00 3.41
3180 12571 7.339482 ACTCCCTCTGTTCCTAAATATTTGTC 58.661 38.462 11.05 0.00 0.00 3.18
3181 12572 7.272144 ACTCCCTCTGTTCCTAAATATTTGT 57.728 36.000 11.05 0.00 0.00 2.83
3182 12573 8.487028 AGTACTCCCTCTGTTCCTAAATATTTG 58.513 37.037 11.05 1.40 0.00 2.32
3183 12574 8.625467 AGTACTCCCTCTGTTCCTAAATATTT 57.375 34.615 5.89 5.89 0.00 1.40
3184 12575 9.369672 CTAGTACTCCCTCTGTTCCTAAATATT 57.630 37.037 0.00 0.00 0.00 1.28
3185 12576 7.452189 GCTAGTACTCCCTCTGTTCCTAAATAT 59.548 40.741 0.00 0.00 0.00 1.28
3186 12577 6.776603 GCTAGTACTCCCTCTGTTCCTAAATA 59.223 42.308 0.00 0.00 0.00 1.40
3187 12578 5.599242 GCTAGTACTCCCTCTGTTCCTAAAT 59.401 44.000 0.00 0.00 0.00 1.40
3188 12579 4.954826 GCTAGTACTCCCTCTGTTCCTAAA 59.045 45.833 0.00 0.00 0.00 1.85
3189 12580 4.017775 TGCTAGTACTCCCTCTGTTCCTAA 60.018 45.833 0.00 0.00 0.00 2.69
3190 12581 3.526430 TGCTAGTACTCCCTCTGTTCCTA 59.474 47.826 0.00 0.00 0.00 2.94
3191 12582 2.312140 TGCTAGTACTCCCTCTGTTCCT 59.688 50.000 0.00 0.00 0.00 3.36
3192 12583 2.736347 TGCTAGTACTCCCTCTGTTCC 58.264 52.381 0.00 0.00 0.00 3.62
3193 12584 4.017808 TCTTGCTAGTACTCCCTCTGTTC 58.982 47.826 0.00 0.00 0.00 3.18
3194 12585 4.048970 TCTTGCTAGTACTCCCTCTGTT 57.951 45.455 0.00 0.00 0.00 3.16
3195 12586 3.741245 TCTTGCTAGTACTCCCTCTGT 57.259 47.619 0.00 0.00 0.00 3.41
3196 12587 4.464597 AGTTTCTTGCTAGTACTCCCTCTG 59.535 45.833 0.00 0.00 0.00 3.35
3197 12588 4.464597 CAGTTTCTTGCTAGTACTCCCTCT 59.535 45.833 0.00 0.00 0.00 3.69
3198 12589 4.463186 TCAGTTTCTTGCTAGTACTCCCTC 59.537 45.833 0.00 0.00 0.00 4.30
3199 12590 4.417437 TCAGTTTCTTGCTAGTACTCCCT 58.583 43.478 0.00 0.00 0.00 4.20
3200 12591 4.803098 TCAGTTTCTTGCTAGTACTCCC 57.197 45.455 0.00 0.00 0.00 4.30
3233 12624 6.533723 CACTGATTATCGGTTACACTGCTTTA 59.466 38.462 3.60 0.00 32.75 1.85
3241 12632 8.035984 TGTTGTTATCACTGATTATCGGTTACA 58.964 33.333 3.60 4.43 32.75 2.41
3242 12633 8.415192 TGTTGTTATCACTGATTATCGGTTAC 57.585 34.615 3.60 2.05 32.75 2.50
3243 12634 9.438228 TTTGTTGTTATCACTGATTATCGGTTA 57.562 29.630 3.60 0.00 32.75 2.85
3244 12635 7.915293 TTGTTGTTATCACTGATTATCGGTT 57.085 32.000 3.60 0.00 32.75 4.44
3245 12636 7.915293 TTTGTTGTTATCACTGATTATCGGT 57.085 32.000 0.04 0.04 36.16 4.69
3246 12637 8.611757 TGATTTGTTGTTATCACTGATTATCGG 58.388 33.333 0.00 0.00 0.00 4.18
3247 12638 9.986833 TTGATTTGTTGTTATCACTGATTATCG 57.013 29.630 0.00 0.00 30.89 2.92
3253 12644 8.075574 GTGATGTTGATTTGTTGTTATCACTGA 58.924 33.333 0.00 0.00 39.77 3.41
3268 12659 3.945981 TGCAATGCTGTGATGTTGATT 57.054 38.095 6.82 0.00 0.00 2.57
3290 12681 7.155328 AGTCTGTAATCTGGAAAAGTACAGTG 58.845 38.462 9.64 0.00 36.02 3.66
3293 12684 6.934645 CCAAGTCTGTAATCTGGAAAAGTACA 59.065 38.462 0.00 0.00 0.00 2.90
3294 12685 6.935208 ACCAAGTCTGTAATCTGGAAAAGTAC 59.065 38.462 0.00 0.00 0.00 2.73
3299 12705 5.163141 TGGAACCAAGTCTGTAATCTGGAAA 60.163 40.000 0.00 0.00 0.00 3.13
3404 12812 3.332187 TGGAACAGGGATACAATGTTGGA 59.668 43.478 2.67 0.00 44.94 3.53
3438 12846 7.676807 GCAATAATGGTGTTTAATTGCCATGTG 60.677 37.037 7.01 6.50 40.48 3.21
3483 12891 0.037419 TATCTGTGCAGCTGCGACAA 60.037 50.000 32.11 23.31 45.83 3.18
3547 12956 7.861372 GTGAGGCTCAGATAATCATTTGATTTG 59.139 37.037 19.38 4.51 41.64 2.32
3560 12969 4.579869 GGAACAAAAGTGAGGCTCAGATA 58.420 43.478 19.38 0.00 0.00 1.98
3570 12979 3.284793 TTCCTTCCGGAACAAAAGTGA 57.715 42.857 14.35 0.13 44.28 3.41


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.