Multiple sequence alignment - TraesCS5B01G337200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G337200 chr5B 100.000 2222 0 0 1 2222 520551153 520553374 0.000000e+00 4104.0
1 TraesCS5B01G337200 chr5D 91.031 1639 95 20 1 1632 431126508 431128101 0.000000e+00 2165.0
2 TraesCS5B01G337200 chr5D 96.491 57 1 1 2159 2215 514508688 514508633 2.350000e-15 93.5
3 TraesCS5B01G337200 chr5D 80.519 77 13 2 470 545 67699164 67699239 8.570000e-05 58.4
4 TraesCS5B01G337200 chr5A 85.577 1040 90 31 448 1457 546385263 546386272 0.000000e+00 1035.0
5 TraesCS5B01G337200 chr5A 84.265 483 29 16 1 474 546384805 546385249 5.670000e-116 427.0
6 TraesCS5B01G337200 chr5A 92.405 79 6 0 257 335 504869495 504869573 1.800000e-21 113.0
7 TraesCS5B01G337200 chr5A 94.118 34 2 0 512 545 636483013 636483046 4.000000e-03 52.8
8 TraesCS5B01G337200 chr2D 91.262 103 8 1 1750 1851 586154813 586154915 2.980000e-29 139.0
9 TraesCS5B01G337200 chr2D 89.655 58 5 1 1451 1508 520982765 520982709 3.060000e-09 73.1
10 TraesCS5B01G337200 chr7A 87.826 115 12 2 1750 1862 438855199 438855313 1.380000e-27 134.0
11 TraesCS5B01G337200 chr7A 81.818 77 12 2 512 587 664772675 664772600 1.840000e-06 63.9
12 TraesCS5B01G337200 chr7A 86.207 58 6 1 1451 1508 168695886 168695831 6.630000e-06 62.1
13 TraesCS5B01G337200 chr2B 89.623 106 10 1 1750 1854 518048169 518048064 1.380000e-27 134.0
14 TraesCS5B01G337200 chr2B 86.087 115 15 1 1750 1864 209092066 209092179 3.000000e-24 122.0
15 TraesCS5B01G337200 chr6B 87.611 113 13 1 1751 1862 655247055 655247167 1.790000e-26 130.0
16 TraesCS5B01G337200 chr4B 88.679 106 11 1 1750 1854 183611203 183611098 6.440000e-26 128.0
17 TraesCS5B01G337200 chr4B 93.651 63 4 0 2160 2222 616276947 616276885 6.530000e-16 95.3
18 TraesCS5B01G337200 chr4B 84.286 70 9 2 477 545 139590352 139590420 1.420000e-07 67.6
19 TraesCS5B01G337200 chr3B 86.957 115 14 1 1750 1863 187552177 187552063 6.440000e-26 128.0
20 TraesCS5B01G337200 chr3B 85.246 122 16 2 1742 1862 809122104 809121984 8.330000e-25 124.0
21 TraesCS5B01G337200 chr1A 88.679 106 11 1 1750 1854 582757795 582757900 6.440000e-26 128.0
22 TraesCS5B01G337200 chr1A 98.148 54 1 0 2154 2207 13740606 13740553 6.530000e-16 95.3
23 TraesCS5B01G337200 chr1A 82.051 78 10 3 512 587 573386371 573386446 1.840000e-06 63.9
24 TraesCS5B01G337200 chr1D 95.312 64 3 0 2159 2222 466498549 466498612 3.900000e-18 102.0
25 TraesCS5B01G337200 chr4D 96.491 57 1 1 2159 2215 37490595 37490650 2.350000e-15 93.5
26 TraesCS5B01G337200 chr2A 89.189 74 6 1 2149 2222 15185085 15185156 8.450000e-15 91.6
27 TraesCS5B01G337200 chr2A 92.188 64 5 0 2159 2222 758758785 758758722 8.450000e-15 91.6
28 TraesCS5B01G337200 chr2A 81.579 76 14 0 470 545 75637125 75637200 1.840000e-06 63.9
29 TraesCS5B01G337200 chr1B 92.188 64 5 0 2159 2222 508400314 508400251 8.450000e-15 91.6
30 TraesCS5B01G337200 chr1B 84.058 69 11 0 477 545 498361782 498361714 1.420000e-07 67.6
31 TraesCS5B01G337200 chr3A 90.769 65 4 2 2159 2222 726995385 726995322 3.930000e-13 86.1
32 TraesCS5B01G337200 chr7D 81.818 77 14 0 469 545 568627212 568627288 5.120000e-07 65.8
33 TraesCS5B01G337200 chr6A 82.278 79 10 4 512 588 103672844 103672768 5.120000e-07 65.8
34 TraesCS5B01G337200 chr6A 80.556 72 10 4 518 587 190662903 190662834 4.000000e-03 52.8
35 TraesCS5B01G337200 chr6A 80.556 72 10 4 518 587 190690141 190690072 4.000000e-03 52.8
36 TraesCS5B01G337200 chr6A 80.556 72 10 4 518 587 190741238 190741169 4.000000e-03 52.8
37 TraesCS5B01G337200 chr3D 85.965 57 6 1 1452 1508 148520185 148520239 2.380000e-05 60.2


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G337200 chr5B 520551153 520553374 2221 False 4104 4104 100.000 1 2222 1 chr5B.!!$F1 2221
1 TraesCS5B01G337200 chr5D 431126508 431128101 1593 False 2165 2165 91.031 1 1632 1 chr5D.!!$F2 1631
2 TraesCS5B01G337200 chr5A 546384805 546386272 1467 False 731 1035 84.921 1 1457 2 chr5A.!!$F3 1456

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
244 253 0.042448 GCACGACGTGGAACAAAGAC 60.042 55.0 27.86 5.48 44.16 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2047 2133 0.106708 GATGGAGGGAGCAACGCATA 59.893 55.0 0.0 0.0 0.0 3.14 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
54 55 2.512745 ACAAAGTGGACGCACGCA 60.513 55.556 0.00 0.00 0.00 5.24
57 58 0.998226 CAAAGTGGACGCACGCAATG 60.998 55.000 0.00 0.00 0.00 2.82
79 80 4.718774 TGAATTCCAACTGCCTATCTCTCT 59.281 41.667 2.27 0.00 0.00 3.10
80 81 4.953940 ATTCCAACTGCCTATCTCTCTC 57.046 45.455 0.00 0.00 0.00 3.20
233 242 0.241749 TAACGAGATTGGCACGACGT 59.758 50.000 0.00 0.00 34.56 4.34
235 244 2.444624 CGAGATTGGCACGACGTGG 61.445 63.158 27.86 11.08 33.64 4.94
236 245 1.080093 GAGATTGGCACGACGTGGA 60.080 57.895 27.86 0.00 33.64 4.02
237 246 0.669318 GAGATTGGCACGACGTGGAA 60.669 55.000 27.86 2.72 33.64 3.53
238 247 0.949105 AGATTGGCACGACGTGGAAC 60.949 55.000 27.86 12.31 33.64 3.62
239 248 1.225376 GATTGGCACGACGTGGAACA 61.225 55.000 27.86 9.78 35.74 3.18
240 249 0.816018 ATTGGCACGACGTGGAACAA 60.816 50.000 27.86 16.38 44.16 2.83
241 250 1.025113 TTGGCACGACGTGGAACAAA 61.025 50.000 27.86 9.68 44.16 2.83
242 251 1.278637 GGCACGACGTGGAACAAAG 59.721 57.895 27.86 1.66 44.16 2.77
243 252 1.155424 GGCACGACGTGGAACAAAGA 61.155 55.000 27.86 0.00 44.16 2.52
244 253 0.042448 GCACGACGTGGAACAAAGAC 60.042 55.000 27.86 5.48 44.16 3.01
245 254 1.567504 CACGACGTGGAACAAAGACT 58.432 50.000 20.26 0.00 44.16 3.24
246 255 2.734670 CACGACGTGGAACAAAGACTA 58.265 47.619 20.26 0.00 44.16 2.59
247 256 3.117794 CACGACGTGGAACAAAGACTAA 58.882 45.455 20.26 0.00 44.16 2.24
248 257 3.060740 CACGACGTGGAACAAAGACTAAC 60.061 47.826 20.26 0.00 44.16 2.34
249 258 3.117794 CGACGTGGAACAAAGACTAACA 58.882 45.455 0.00 0.00 44.16 2.41
250 259 3.739300 CGACGTGGAACAAAGACTAACAT 59.261 43.478 0.00 0.00 44.16 2.71
251 260 4.919168 CGACGTGGAACAAAGACTAACATA 59.081 41.667 0.00 0.00 44.16 2.29
252 261 5.403166 CGACGTGGAACAAAGACTAACATAA 59.597 40.000 0.00 0.00 44.16 1.90
253 262 6.090358 CGACGTGGAACAAAGACTAACATAAT 59.910 38.462 0.00 0.00 44.16 1.28
254 263 7.359765 CGACGTGGAACAAAGACTAACATAATT 60.360 37.037 0.00 0.00 44.16 1.40
255 264 8.836268 ACGTGGAACAAAGACTAACATAATTA 57.164 30.769 0.00 0.00 44.16 1.40
291 303 1.568504 AATTAGGGAGCTCACCGACA 58.431 50.000 13.73 2.80 0.00 4.35
292 304 1.568504 ATTAGGGAGCTCACCGACAA 58.431 50.000 13.73 9.73 0.00 3.18
408 420 4.626172 GTCAACTCTTGAATCGGTTACTCC 59.374 45.833 0.00 0.00 42.15 3.85
453 466 9.786105 TGTTTATTTGTTCATGCACATATGTAG 57.214 29.630 8.32 4.59 0.00 2.74
454 467 8.745837 GTTTATTTGTTCATGCACATATGTAGC 58.254 33.333 8.32 14.46 0.00 3.58
495 553 7.886405 ACTTTCTCCGTTCTGAATTACTTAC 57.114 36.000 0.00 0.00 0.00 2.34
578 636 8.649810 CTTACGCAATAAGTAATTTCAAACGT 57.350 30.769 0.00 0.00 36.30 3.99
579 637 9.743937 CTTACGCAATAAGTAATTTCAAACGTA 57.256 29.630 0.00 0.00 36.30 3.57
582 640 6.685403 CGCAATAAGTAATTTCAAACGTAGGG 59.315 38.462 0.00 0.00 0.00 3.53
588 648 6.104665 AGTAATTTCAAACGTAGGGAGTAGC 58.895 40.000 0.00 0.00 0.00 3.58
606 666 5.368145 AGTAGCAGATGAGTGTTGTTTCAA 58.632 37.500 0.00 0.00 0.00 2.69
612 672 7.229306 AGCAGATGAGTGTTGTTTCAAATCTTA 59.771 33.333 0.00 0.00 0.00 2.10
647 707 5.942236 AGCCATGCTATACTATGGAAATGTG 59.058 40.000 12.58 0.00 45.32 3.21
652 712 6.298361 TGCTATACTATGGAAATGTGCATGT 58.702 36.000 0.00 0.00 36.34 3.21
654 714 3.788333 ACTATGGAAATGTGCATGTGC 57.212 42.857 0.00 0.00 36.34 4.57
655 715 3.359033 ACTATGGAAATGTGCATGTGCT 58.641 40.909 0.00 0.00 42.66 4.40
660 720 3.320256 TGGAAATGTGCATGTGCTTGTTA 59.680 39.130 6.55 0.00 42.66 2.41
676 736 4.793071 CTTGTTATGTTGACGCCATGAAA 58.207 39.130 0.00 0.00 0.00 2.69
677 737 4.837896 TGTTATGTTGACGCCATGAAAA 57.162 36.364 0.00 0.00 0.00 2.29
704 764 6.262273 ACTTATTTTCTCGCCTTTTCTGACAA 59.738 34.615 0.00 0.00 0.00 3.18
761 822 1.804151 CGGTCATTGGTCAACACGATT 59.196 47.619 0.00 0.00 0.00 3.34
762 823 2.412716 CGGTCATTGGTCAACACGATTG 60.413 50.000 0.00 0.00 0.00 2.67
778 839 3.263425 ACGATTGGAGGAACAGTGGTAAT 59.737 43.478 0.00 0.00 0.00 1.89
787 848 0.320421 ACAGTGGTAATGCGAACGCT 60.320 50.000 19.32 3.64 42.51 5.07
811 872 4.082192 GCGGAATGCATGCAACTG 57.918 55.556 26.68 24.82 45.45 3.16
812 873 1.517694 GCGGAATGCATGCAACTGG 60.518 57.895 26.68 15.40 45.45 4.00
1152 1215 2.203480 GACCCAGCCTGCACCAAA 60.203 61.111 0.00 0.00 0.00 3.28
1315 1394 2.115291 GGAGGAAAGATGCGTGCCC 61.115 63.158 0.00 0.00 0.00 5.36
1336 1421 1.128507 GCATGCTGTTCGTTCATTCGA 59.871 47.619 11.37 0.00 38.08 3.71
1370 1455 7.945134 AGCTAGTTCTTGTTGAATTCATTTGT 58.055 30.769 9.40 0.00 36.99 2.83
1583 1669 4.077184 TGTGGGTGCCGATCGTCC 62.077 66.667 15.09 12.77 0.00 4.79
1588 1674 1.144057 GGTGCCGATCGTCCTCATT 59.856 57.895 15.09 0.00 0.00 2.57
1618 1704 9.256477 TGTTAATTATTTACGCTGTATCTCCTG 57.744 33.333 0.00 0.00 0.00 3.86
1622 1708 8.988064 ATTATTTACGCTGTATCTCCTGTATG 57.012 34.615 0.00 0.00 0.00 2.39
1624 1710 5.847111 TTACGCTGTATCTCCTGTATGTT 57.153 39.130 0.00 0.00 0.00 2.71
1626 1712 3.181475 ACGCTGTATCTCCTGTATGTTGG 60.181 47.826 0.00 0.00 0.00 3.77
1627 1713 3.181475 CGCTGTATCTCCTGTATGTTGGT 60.181 47.826 0.00 0.00 0.00 3.67
1628 1714 4.372656 GCTGTATCTCCTGTATGTTGGTC 58.627 47.826 0.00 0.00 0.00 4.02
1630 1716 5.626809 GCTGTATCTCCTGTATGTTGGTCAA 60.627 44.000 0.00 0.00 0.00 3.18
1631 1717 5.977635 TGTATCTCCTGTATGTTGGTCAAG 58.022 41.667 0.00 0.00 0.00 3.02
1632 1718 3.334583 TCTCCTGTATGTTGGTCAAGC 57.665 47.619 0.00 0.00 0.00 4.01
1633 1719 2.637382 TCTCCTGTATGTTGGTCAAGCA 59.363 45.455 0.00 0.00 0.00 3.91
1634 1720 3.005554 CTCCTGTATGTTGGTCAAGCAG 58.994 50.000 0.00 0.00 34.26 4.24
1635 1721 2.637382 TCCTGTATGTTGGTCAAGCAGA 59.363 45.455 0.00 0.00 35.47 4.26
1636 1722 2.744202 CCTGTATGTTGGTCAAGCAGAC 59.256 50.000 1.04 1.04 46.83 3.51
1660 1746 8.981724 ACACATAGTAAGTATATATGTTGCCG 57.018 34.615 0.00 0.00 37.90 5.69
1661 1747 8.799367 ACACATAGTAAGTATATATGTTGCCGA 58.201 33.333 0.00 0.00 37.90 5.54
1662 1748 9.290483 CACATAGTAAGTATATATGTTGCCGAG 57.710 37.037 0.00 0.00 37.90 4.63
1663 1749 9.021807 ACATAGTAAGTATATATGTTGCCGAGT 57.978 33.333 0.00 0.00 36.91 4.18
1664 1750 9.856488 CATAGTAAGTATATATGTTGCCGAGTT 57.144 33.333 0.00 0.00 0.00 3.01
1666 1752 7.948357 AGTAAGTATATATGTTGCCGAGTTCA 58.052 34.615 0.00 0.00 0.00 3.18
1667 1753 8.418662 AGTAAGTATATATGTTGCCGAGTTCAA 58.581 33.333 0.00 0.00 0.00 2.69
1668 1754 9.037737 GTAAGTATATATGTTGCCGAGTTCAAA 57.962 33.333 0.00 0.00 0.00 2.69
1669 1755 8.500753 AAGTATATATGTTGCCGAGTTCAAAA 57.499 30.769 0.00 0.00 0.00 2.44
1670 1756 8.500753 AGTATATATGTTGCCGAGTTCAAAAA 57.499 30.769 0.00 0.00 0.00 1.94
1692 1778 5.789710 AAAAAGTATATACGTTGCGCACT 57.210 34.783 11.12 0.00 0.00 4.40
1693 1779 5.385396 AAAAGTATATACGTTGCGCACTC 57.615 39.130 11.12 5.52 0.00 3.51
1694 1780 3.009301 AGTATATACGTTGCGCACTCC 57.991 47.619 11.12 0.00 0.00 3.85
1695 1781 2.359848 AGTATATACGTTGCGCACTCCA 59.640 45.455 11.12 0.00 0.00 3.86
1696 1782 2.526304 ATATACGTTGCGCACTCCAT 57.474 45.000 11.12 4.11 0.00 3.41
1697 1783 1.566404 TATACGTTGCGCACTCCATG 58.434 50.000 11.12 2.91 0.00 3.66
1698 1784 0.391130 ATACGTTGCGCACTCCATGT 60.391 50.000 11.12 10.05 0.00 3.21
1700 1786 2.562912 GTTGCGCACTCCATGTGG 59.437 61.111 11.12 0.00 46.27 4.17
1701 1787 2.112928 TTGCGCACTCCATGTGGT 59.887 55.556 11.12 0.00 46.27 4.16
1702 1788 1.528076 TTGCGCACTCCATGTGGTT 60.528 52.632 11.12 0.00 46.27 3.67
1703 1789 1.794151 TTGCGCACTCCATGTGGTTG 61.794 55.000 11.12 0.00 46.27 3.77
1704 1790 2.981560 GCGCACTCCATGTGGTTGG 61.982 63.158 0.30 0.00 46.27 3.77
1705 1791 1.302431 CGCACTCCATGTGGTTGGA 60.302 57.895 0.00 0.00 46.27 3.53
1706 1792 0.888736 CGCACTCCATGTGGTTGGAA 60.889 55.000 0.00 0.00 45.03 3.53
1707 1793 1.327303 GCACTCCATGTGGTTGGAAA 58.673 50.000 0.00 0.00 45.03 3.13
1708 1794 1.000274 GCACTCCATGTGGTTGGAAAC 60.000 52.381 0.00 0.00 45.03 2.78
1721 1807 4.585955 GTTGGAAACCTTTTCTCTTCCC 57.414 45.455 0.00 0.00 42.21 3.97
1722 1808 2.858745 TGGAAACCTTTTCTCTTCCCG 58.141 47.619 0.00 0.00 37.18 5.14
1723 1809 2.173996 TGGAAACCTTTTCTCTTCCCGT 59.826 45.455 0.00 0.00 37.18 5.28
1724 1810 3.220110 GGAAACCTTTTCTCTTCCCGTT 58.780 45.455 0.00 0.00 32.71 4.44
1725 1811 4.141436 TGGAAACCTTTTCTCTTCCCGTTA 60.141 41.667 0.00 0.00 37.18 3.18
1726 1812 4.214971 GGAAACCTTTTCTCTTCCCGTTAC 59.785 45.833 0.00 0.00 32.71 2.50
1727 1813 3.036075 ACCTTTTCTCTTCCCGTTACG 57.964 47.619 0.00 0.00 0.00 3.18
1728 1814 2.629617 ACCTTTTCTCTTCCCGTTACGA 59.370 45.455 6.24 0.00 0.00 3.43
1729 1815 3.070015 ACCTTTTCTCTTCCCGTTACGAA 59.930 43.478 6.24 0.00 0.00 3.85
1730 1816 3.431233 CCTTTTCTCTTCCCGTTACGAAC 59.569 47.826 6.24 0.00 0.00 3.95
1731 1817 4.304939 CTTTTCTCTTCCCGTTACGAACT 58.695 43.478 6.24 0.00 0.00 3.01
1732 1818 3.565905 TTCTCTTCCCGTTACGAACTC 57.434 47.619 6.24 0.00 0.00 3.01
1733 1819 1.815003 TCTCTTCCCGTTACGAACTCC 59.185 52.381 6.24 0.00 0.00 3.85
1734 1820 1.817447 CTCTTCCCGTTACGAACTCCT 59.183 52.381 6.24 0.00 0.00 3.69
1735 1821 2.230750 CTCTTCCCGTTACGAACTCCTT 59.769 50.000 6.24 0.00 0.00 3.36
1736 1822 2.629617 TCTTCCCGTTACGAACTCCTTT 59.370 45.455 6.24 0.00 0.00 3.11
1737 1823 3.070015 TCTTCCCGTTACGAACTCCTTTT 59.930 43.478 6.24 0.00 0.00 2.27
1738 1824 4.280677 TCTTCCCGTTACGAACTCCTTTTA 59.719 41.667 6.24 0.00 0.00 1.52
1739 1825 4.599047 TCCCGTTACGAACTCCTTTTAA 57.401 40.909 6.24 0.00 0.00 1.52
1740 1826 4.559153 TCCCGTTACGAACTCCTTTTAAG 58.441 43.478 6.24 0.00 0.00 1.85
1741 1827 4.280677 TCCCGTTACGAACTCCTTTTAAGA 59.719 41.667 6.24 0.00 0.00 2.10
1742 1828 4.990426 CCCGTTACGAACTCCTTTTAAGAA 59.010 41.667 6.24 0.00 0.00 2.52
1743 1829 5.466393 CCCGTTACGAACTCCTTTTAAGAAA 59.534 40.000 6.24 0.00 0.00 2.52
1744 1830 6.148315 CCCGTTACGAACTCCTTTTAAGAAAT 59.852 38.462 6.24 0.00 0.00 2.17
1745 1831 7.331687 CCCGTTACGAACTCCTTTTAAGAAATA 59.668 37.037 6.24 0.00 0.00 1.40
1746 1832 8.876790 CCGTTACGAACTCCTTTTAAGAAATAT 58.123 33.333 6.24 0.00 0.00 1.28
1747 1833 9.897349 CGTTACGAACTCCTTTTAAGAAATATC 57.103 33.333 0.00 0.00 0.00 1.63
1748 1834 9.897349 GTTACGAACTCCTTTTAAGAAATATCG 57.103 33.333 0.00 0.00 0.00 2.92
1749 1835 7.001695 ACGAACTCCTTTTAAGAAATATCGC 57.998 36.000 0.00 0.00 0.00 4.58
1750 1836 6.036844 ACGAACTCCTTTTAAGAAATATCGCC 59.963 38.462 0.00 0.00 0.00 5.54
1751 1837 6.511282 CGAACTCCTTTTAAGAAATATCGCCC 60.511 42.308 0.00 0.00 0.00 6.13
1752 1838 6.002653 ACTCCTTTTAAGAAATATCGCCCT 57.997 37.500 0.00 0.00 0.00 5.19
1753 1839 6.056236 ACTCCTTTTAAGAAATATCGCCCTC 58.944 40.000 0.00 0.00 0.00 4.30
1754 1840 5.374071 TCCTTTTAAGAAATATCGCCCTCC 58.626 41.667 0.00 0.00 0.00 4.30
1755 1841 4.213482 CCTTTTAAGAAATATCGCCCTCCG 59.787 45.833 0.00 0.00 38.61 4.63
1756 1842 4.411256 TTTAAGAAATATCGCCCTCCGT 57.589 40.909 0.00 0.00 38.35 4.69
1757 1843 2.528041 AAGAAATATCGCCCTCCGTC 57.472 50.000 0.00 0.00 38.35 4.79
1758 1844 0.680061 AGAAATATCGCCCTCCGTCC 59.320 55.000 0.00 0.00 38.35 4.79
1759 1845 0.666577 GAAATATCGCCCTCCGTCCG 60.667 60.000 0.00 0.00 38.35 4.79
1760 1846 1.111116 AAATATCGCCCTCCGTCCGA 61.111 55.000 0.00 0.00 38.35 4.55
1761 1847 1.111116 AATATCGCCCTCCGTCCGAA 61.111 55.000 0.00 0.00 38.35 4.30
1762 1848 1.111116 ATATCGCCCTCCGTCCGAAA 61.111 55.000 0.00 0.00 38.35 3.46
1763 1849 1.321805 TATCGCCCTCCGTCCGAAAA 61.322 55.000 0.00 0.00 38.35 2.29
1764 1850 2.175035 ATCGCCCTCCGTCCGAAAAA 62.175 55.000 0.00 0.00 38.35 1.94
1765 1851 1.743995 CGCCCTCCGTCCGAAAAAT 60.744 57.895 0.00 0.00 0.00 1.82
1766 1852 1.303091 CGCCCTCCGTCCGAAAAATT 61.303 55.000 0.00 0.00 0.00 1.82
1767 1853 0.885879 GCCCTCCGTCCGAAAAATTT 59.114 50.000 0.00 0.00 0.00 1.82
1768 1854 1.402325 GCCCTCCGTCCGAAAAATTTG 60.402 52.381 0.00 0.00 0.00 2.32
1769 1855 1.883926 CCCTCCGTCCGAAAAATTTGT 59.116 47.619 0.00 0.00 0.00 2.83
1770 1856 2.295070 CCCTCCGTCCGAAAAATTTGTT 59.705 45.455 0.00 0.00 0.00 2.83
1771 1857 3.243602 CCCTCCGTCCGAAAAATTTGTTT 60.244 43.478 0.00 0.00 0.00 2.83
1772 1858 3.978855 CCTCCGTCCGAAAAATTTGTTTC 59.021 43.478 0.00 0.00 34.71 2.78
1773 1859 4.261447 CCTCCGTCCGAAAAATTTGTTTCT 60.261 41.667 0.00 0.00 35.70 2.52
1774 1860 4.851010 TCCGTCCGAAAAATTTGTTTCTC 58.149 39.130 0.00 0.00 35.70 2.87
1775 1861 4.335874 TCCGTCCGAAAAATTTGTTTCTCA 59.664 37.500 0.00 0.00 35.70 3.27
1776 1862 5.038033 CCGTCCGAAAAATTTGTTTCTCAA 58.962 37.500 0.00 0.00 35.70 3.02
1792 1878 8.791327 TGTTTCTCAAATGAATGTATCTAGCA 57.209 30.769 0.00 0.00 0.00 3.49
1793 1879 9.399797 TGTTTCTCAAATGAATGTATCTAGCAT 57.600 29.630 0.00 0.00 0.00 3.79
1794 1880 9.875675 GTTTCTCAAATGAATGTATCTAGCATC 57.124 33.333 0.00 0.00 0.00 3.91
1795 1881 9.617523 TTTCTCAAATGAATGTATCTAGCATCA 57.382 29.630 0.00 0.00 0.00 3.07
1796 1882 9.617523 TTCTCAAATGAATGTATCTAGCATCAA 57.382 29.630 0.00 0.00 0.00 2.57
1797 1883 9.269453 TCTCAAATGAATGTATCTAGCATCAAG 57.731 33.333 0.00 0.00 0.00 3.02
1798 1884 8.969260 TCAAATGAATGTATCTAGCATCAAGT 57.031 30.769 0.00 0.00 0.00 3.16
1799 1885 9.399797 TCAAATGAATGTATCTAGCATCAAGTT 57.600 29.630 0.00 0.00 0.00 2.66
1803 1889 8.877808 TGAATGTATCTAGCATCAAGTTAGTG 57.122 34.615 0.00 0.00 33.25 2.74
1804 1890 8.478066 TGAATGTATCTAGCATCAAGTTAGTGT 58.522 33.333 0.00 0.00 33.25 3.55
1805 1891 9.319143 GAATGTATCTAGCATCAAGTTAGTGTT 57.681 33.333 0.00 0.00 33.25 3.32
1807 1893 9.973450 ATGTATCTAGCATCAAGTTAGTGTTAG 57.027 33.333 0.00 4.96 33.25 2.34
1808 1894 9.185680 TGTATCTAGCATCAAGTTAGTGTTAGA 57.814 33.333 12.45 12.45 39.10 2.10
1812 1898 9.185680 TCTAGCATCAAGTTAGTGTTAGATACA 57.814 33.333 8.31 0.00 32.92 2.29
1813 1899 9.973450 CTAGCATCAAGTTAGTGTTAGATACAT 57.027 33.333 5.24 0.00 39.39 2.29
1814 1900 8.879342 AGCATCAAGTTAGTGTTAGATACATC 57.121 34.615 0.00 0.00 39.39 3.06
1815 1901 8.478066 AGCATCAAGTTAGTGTTAGATACATCA 58.522 33.333 0.00 0.00 39.39 3.07
1816 1902 9.098355 GCATCAAGTTAGTGTTAGATACATCAA 57.902 33.333 0.00 0.00 39.39 2.57
1826 1912 9.614792 AGTGTTAGATACATCAATTTAAGGGAC 57.385 33.333 0.00 0.00 39.39 4.46
1827 1913 9.391006 GTGTTAGATACATCAATTTAAGGGACA 57.609 33.333 0.00 0.00 39.39 4.02
1834 1920 7.645058 ACATCAATTTAAGGGACATACTTGG 57.355 36.000 0.00 0.00 0.00 3.61
1835 1921 7.410174 ACATCAATTTAAGGGACATACTTGGA 58.590 34.615 0.00 0.00 0.00 3.53
1836 1922 7.893302 ACATCAATTTAAGGGACATACTTGGAA 59.107 33.333 0.00 0.00 0.00 3.53
1837 1923 7.696992 TCAATTTAAGGGACATACTTGGAAC 57.303 36.000 0.00 0.00 0.00 3.62
1838 1924 7.235079 TCAATTTAAGGGACATACTTGGAACA 58.765 34.615 0.00 0.00 0.00 3.18
1863 1949 4.582701 TTTTTCGGACGGTAAGAGTACA 57.417 40.909 0.00 0.00 31.21 2.90
1864 1950 4.582701 TTTTCGGACGGTAAGAGTACAA 57.417 40.909 0.00 0.00 31.21 2.41
1865 1951 4.789012 TTTCGGACGGTAAGAGTACAAT 57.211 40.909 0.00 0.00 31.21 2.71
1866 1952 3.770263 TCGGACGGTAAGAGTACAATG 57.230 47.619 0.00 0.00 31.21 2.82
1867 1953 2.159338 TCGGACGGTAAGAGTACAATGC 60.159 50.000 0.00 0.00 31.21 3.56
1868 1954 2.416296 CGGACGGTAAGAGTACAATGCA 60.416 50.000 0.00 0.00 31.21 3.96
1869 1955 3.187700 GGACGGTAAGAGTACAATGCAG 58.812 50.000 0.00 0.00 31.21 4.41
1870 1956 3.119245 GGACGGTAAGAGTACAATGCAGA 60.119 47.826 0.00 0.00 31.21 4.26
1871 1957 4.441634 GGACGGTAAGAGTACAATGCAGAT 60.442 45.833 0.00 0.00 31.21 2.90
1872 1958 5.221185 GGACGGTAAGAGTACAATGCAGATA 60.221 44.000 0.00 0.00 31.21 1.98
1873 1959 5.589192 ACGGTAAGAGTACAATGCAGATAC 58.411 41.667 0.00 0.00 31.21 2.24
1874 1960 5.360144 ACGGTAAGAGTACAATGCAGATACT 59.640 40.000 6.95 6.95 31.21 2.12
1875 1961 5.915758 CGGTAAGAGTACAATGCAGATACTC 59.084 44.000 19.74 19.74 43.41 2.59
1876 1962 6.459710 CGGTAAGAGTACAATGCAGATACTCA 60.460 42.308 25.15 11.51 44.83 3.41
1877 1963 6.697892 GGTAAGAGTACAATGCAGATACTCAC 59.302 42.308 25.15 18.59 44.83 3.51
1878 1964 5.921962 AGAGTACAATGCAGATACTCACA 57.078 39.130 25.15 0.00 44.83 3.58
1879 1965 5.655488 AGAGTACAATGCAGATACTCACAC 58.345 41.667 25.15 9.07 44.83 3.82
1880 1966 4.424626 AGTACAATGCAGATACTCACACG 58.575 43.478 0.00 0.00 0.00 4.49
1881 1967 3.319137 ACAATGCAGATACTCACACGT 57.681 42.857 0.00 0.00 0.00 4.49
1882 1968 4.450082 ACAATGCAGATACTCACACGTA 57.550 40.909 0.00 0.00 0.00 3.57
1883 1969 4.424626 ACAATGCAGATACTCACACGTAG 58.575 43.478 0.00 0.00 0.00 3.51
1884 1970 3.717400 ATGCAGATACTCACACGTAGG 57.283 47.619 0.00 0.00 0.00 3.18
1885 1971 2.718563 TGCAGATACTCACACGTAGGA 58.281 47.619 0.00 0.00 0.00 2.94
1886 1972 3.288092 TGCAGATACTCACACGTAGGAT 58.712 45.455 0.00 0.00 0.00 3.24
1887 1973 4.457466 TGCAGATACTCACACGTAGGATA 58.543 43.478 0.00 0.00 0.00 2.59
1888 1974 4.515567 TGCAGATACTCACACGTAGGATAG 59.484 45.833 0.00 0.00 0.00 2.08
1889 1975 4.083217 GCAGATACTCACACGTAGGATAGG 60.083 50.000 0.00 0.00 0.00 2.57
1890 1976 5.306394 CAGATACTCACACGTAGGATAGGA 58.694 45.833 0.00 0.00 0.00 2.94
1891 1977 5.763698 CAGATACTCACACGTAGGATAGGAA 59.236 44.000 0.00 0.00 0.00 3.36
1892 1978 5.764192 AGATACTCACACGTAGGATAGGAAC 59.236 44.000 0.00 0.00 0.00 3.62
1893 1979 3.693807 ACTCACACGTAGGATAGGAACA 58.306 45.455 0.00 0.00 0.00 3.18
1894 1980 3.442977 ACTCACACGTAGGATAGGAACAC 59.557 47.826 0.00 0.00 0.00 3.32
1895 1981 2.756760 TCACACGTAGGATAGGAACACC 59.243 50.000 0.00 0.00 0.00 4.16
1896 1982 2.494471 CACACGTAGGATAGGAACACCA 59.506 50.000 0.00 0.00 0.00 4.17
1897 1983 2.494870 ACACGTAGGATAGGAACACCAC 59.505 50.000 0.00 0.00 0.00 4.16
1898 1984 2.105766 ACGTAGGATAGGAACACCACC 58.894 52.381 0.00 0.00 0.00 4.61
1899 1985 1.066605 CGTAGGATAGGAACACCACCG 59.933 57.143 0.00 0.00 0.00 4.94
1900 1986 1.117150 TAGGATAGGAACACCACCGC 58.883 55.000 0.00 0.00 0.00 5.68
1901 1987 1.153229 GGATAGGAACACCACCGCC 60.153 63.158 0.00 0.00 0.00 6.13
1902 1988 1.600107 GATAGGAACACCACCGCCA 59.400 57.895 0.00 0.00 0.00 5.69
1903 1989 0.743345 GATAGGAACACCACCGCCAC 60.743 60.000 0.00 0.00 0.00 5.01
1904 1990 1.485294 ATAGGAACACCACCGCCACA 61.485 55.000 0.00 0.00 0.00 4.17
1905 1991 2.386064 TAGGAACACCACCGCCACAC 62.386 60.000 0.00 0.00 0.00 3.82
1906 1992 2.203153 GAACACCACCGCCACACT 60.203 61.111 0.00 0.00 0.00 3.55
1907 1993 1.822186 GAACACCACCGCCACACTT 60.822 57.895 0.00 0.00 0.00 3.16
1908 1994 0.533308 GAACACCACCGCCACACTTA 60.533 55.000 0.00 0.00 0.00 2.24
1909 1995 0.816421 AACACCACCGCCACACTTAC 60.816 55.000 0.00 0.00 0.00 2.34
1910 1996 1.070786 CACCACCGCCACACTTACT 59.929 57.895 0.00 0.00 0.00 2.24
1911 1997 1.070786 ACCACCGCCACACTTACTG 59.929 57.895 0.00 0.00 0.00 2.74
1912 1998 1.070786 CCACCGCCACACTTACTGT 59.929 57.895 0.00 0.00 0.00 3.55
1913 1999 0.949105 CCACCGCCACACTTACTGTC 60.949 60.000 0.00 0.00 0.00 3.51
1914 2000 0.249699 CACCGCCACACTTACTGTCA 60.250 55.000 0.00 0.00 0.00 3.58
1915 2001 0.249741 ACCGCCACACTTACTGTCAC 60.250 55.000 0.00 0.00 0.00 3.67
1916 2002 0.249699 CCGCCACACTTACTGTCACA 60.250 55.000 0.00 0.00 0.00 3.58
1917 2003 0.859232 CGCCACACTTACTGTCACAC 59.141 55.000 0.00 0.00 0.00 3.82
1918 2004 1.804746 CGCCACACTTACTGTCACACA 60.805 52.381 0.00 0.00 0.00 3.72
1919 2005 2.285083 GCCACACTTACTGTCACACAA 58.715 47.619 0.00 0.00 0.00 3.33
1920 2006 2.878406 GCCACACTTACTGTCACACAAT 59.122 45.455 0.00 0.00 0.00 2.71
1921 2007 3.303990 GCCACACTTACTGTCACACAATG 60.304 47.826 0.00 0.00 0.00 2.82
1922 2008 3.876914 CCACACTTACTGTCACACAATGT 59.123 43.478 0.00 0.00 0.00 2.71
1923 2009 4.024893 CCACACTTACTGTCACACAATGTC 60.025 45.833 0.00 0.00 0.00 3.06
1924 2010 4.811024 CACACTTACTGTCACACAATGTCT 59.189 41.667 0.00 0.00 0.00 3.41
1925 2011 5.983118 CACACTTACTGTCACACAATGTCTA 59.017 40.000 0.00 0.00 0.00 2.59
1926 2012 5.983720 ACACTTACTGTCACACAATGTCTAC 59.016 40.000 0.00 0.00 0.00 2.59
1927 2013 6.183360 ACACTTACTGTCACACAATGTCTACT 60.183 38.462 0.00 0.00 0.00 2.57
1928 2014 6.701841 CACTTACTGTCACACAATGTCTACTT 59.298 38.462 0.00 0.00 0.00 2.24
1929 2015 7.224753 CACTTACTGTCACACAATGTCTACTTT 59.775 37.037 0.00 0.00 0.00 2.66
1930 2016 8.418662 ACTTACTGTCACACAATGTCTACTTTA 58.581 33.333 0.00 0.00 0.00 1.85
1931 2017 8.812147 TTACTGTCACACAATGTCTACTTTAG 57.188 34.615 0.00 0.00 0.00 1.85
1932 2018 6.817184 ACTGTCACACAATGTCTACTTTAGT 58.183 36.000 0.00 0.00 0.00 2.24
1933 2019 6.701841 ACTGTCACACAATGTCTACTTTAGTG 59.298 38.462 0.00 0.00 0.00 2.74
1934 2020 6.578944 TGTCACACAATGTCTACTTTAGTGT 58.421 36.000 0.00 0.00 39.09 3.55
1936 2022 6.228273 CACACAATGTCTACTTTAGTGTGG 57.772 41.667 20.92 12.05 46.82 4.17
1937 2023 5.989168 CACACAATGTCTACTTTAGTGTGGA 59.011 40.000 20.92 0.00 46.82 4.02
1938 2024 5.989777 ACACAATGTCTACTTTAGTGTGGAC 59.010 40.000 8.56 4.58 44.95 4.02
1939 2025 5.118664 CACAATGTCTACTTTAGTGTGGACG 59.881 44.000 6.65 0.00 46.78 4.79
1940 2026 5.221382 ACAATGTCTACTTTAGTGTGGACGT 60.221 40.000 0.00 0.00 46.78 4.34
1941 2027 6.016024 ACAATGTCTACTTTAGTGTGGACGTA 60.016 38.462 6.36 0.00 46.78 3.57
1942 2028 5.618056 TGTCTACTTTAGTGTGGACGTAG 57.382 43.478 0.00 0.00 46.78 3.51
1943 2029 4.456911 TGTCTACTTTAGTGTGGACGTAGG 59.543 45.833 0.00 0.00 46.78 3.18
1944 2030 2.738013 ACTTTAGTGTGGACGTAGGC 57.262 50.000 0.00 0.00 0.00 3.93
1945 2031 1.965643 ACTTTAGTGTGGACGTAGGCA 59.034 47.619 0.00 0.00 0.00 4.75
1946 2032 2.565834 ACTTTAGTGTGGACGTAGGCAT 59.434 45.455 0.00 0.00 0.00 4.40
1947 2033 2.665649 TTAGTGTGGACGTAGGCATG 57.334 50.000 0.00 0.00 0.00 4.06
1948 2034 0.821517 TAGTGTGGACGTAGGCATGG 59.178 55.000 0.00 0.00 0.00 3.66
1949 2035 1.449601 GTGTGGACGTAGGCATGGG 60.450 63.158 0.00 0.00 0.00 4.00
1950 2036 1.916273 TGTGGACGTAGGCATGGGT 60.916 57.895 0.00 0.00 0.00 4.51
1951 2037 1.449601 GTGGACGTAGGCATGGGTG 60.450 63.158 0.00 0.00 0.00 4.61
1952 2038 2.189521 GGACGTAGGCATGGGTGG 59.810 66.667 0.00 0.00 0.00 4.61
1967 2053 3.059982 TGGCCTGACCAGTTCGAG 58.940 61.111 3.32 0.00 46.36 4.04
1968 2054 2.435059 GGCCTGACCAGTTCGAGC 60.435 66.667 0.00 0.00 38.86 5.03
1969 2055 2.811317 GCCTGACCAGTTCGAGCG 60.811 66.667 0.00 0.00 0.00 5.03
1970 2056 2.125912 CCTGACCAGTTCGAGCGG 60.126 66.667 8.20 8.20 0.00 5.52
1971 2057 2.125912 CTGACCAGTTCGAGCGGG 60.126 66.667 16.43 16.43 0.00 6.13
1972 2058 4.373116 TGACCAGTTCGAGCGGGC 62.373 66.667 17.81 12.88 0.00 6.13
1973 2059 4.070552 GACCAGTTCGAGCGGGCT 62.071 66.667 17.81 5.87 0.00 5.19
1974 2060 3.591254 GACCAGTTCGAGCGGGCTT 62.591 63.158 17.81 0.00 0.00 4.35
1975 2061 2.358737 CCAGTTCGAGCGGGCTTT 60.359 61.111 5.39 0.00 0.00 3.51
1976 2062 2.680913 CCAGTTCGAGCGGGCTTTG 61.681 63.158 5.39 0.00 0.00 2.77
1977 2063 2.358737 AGTTCGAGCGGGCTTTGG 60.359 61.111 0.00 0.00 0.00 3.28
1978 2064 4.103103 GTTCGAGCGGGCTTTGGC 62.103 66.667 0.00 0.00 37.82 4.52
1979 2065 4.329545 TTCGAGCGGGCTTTGGCT 62.330 61.111 0.00 0.00 43.42 4.75
1986 2072 2.600470 GGGCTTTGGCTCCGGTTT 60.600 61.111 0.00 0.00 38.73 3.27
1987 2073 2.207229 GGGCTTTGGCTCCGGTTTT 61.207 57.895 0.00 0.00 38.73 2.43
1988 2074 1.745890 GGCTTTGGCTCCGGTTTTT 59.254 52.632 0.00 0.00 38.73 1.94
1989 2075 0.319555 GGCTTTGGCTCCGGTTTTTC 60.320 55.000 0.00 0.00 38.73 2.29
1990 2076 0.663269 GCTTTGGCTCCGGTTTTTCG 60.663 55.000 0.00 0.00 35.22 3.46
1997 2083 2.973600 CCGGTTTTTCGGCCGTGA 60.974 61.111 27.15 12.78 45.91 4.35
1998 2084 2.554272 CGGTTTTTCGGCCGTGAG 59.446 61.111 27.15 7.06 42.73 3.51
1999 2085 2.248835 CGGTTTTTCGGCCGTGAGT 61.249 57.895 27.15 0.00 42.73 3.41
2000 2086 1.572941 GGTTTTTCGGCCGTGAGTC 59.427 57.895 27.15 13.79 0.00 3.36
2001 2087 0.883370 GGTTTTTCGGCCGTGAGTCT 60.883 55.000 27.15 0.00 0.00 3.24
2002 2088 0.234884 GTTTTTCGGCCGTGAGTCTG 59.765 55.000 27.15 0.00 0.00 3.51
2003 2089 0.882927 TTTTTCGGCCGTGAGTCTGG 60.883 55.000 27.15 0.00 0.00 3.86
2004 2090 2.725203 TTTTCGGCCGTGAGTCTGGG 62.725 60.000 27.15 0.00 0.00 4.45
2009 2095 3.691342 CCGTGAGTCTGGGCCGAA 61.691 66.667 0.00 0.00 0.00 4.30
2010 2096 2.342279 CGTGAGTCTGGGCCGAAA 59.658 61.111 0.00 0.00 0.00 3.46
2011 2097 1.301401 CGTGAGTCTGGGCCGAAAA 60.301 57.895 0.00 0.00 0.00 2.29
2012 2098 1.566018 CGTGAGTCTGGGCCGAAAAC 61.566 60.000 0.00 0.00 0.00 2.43
2013 2099 1.072505 TGAGTCTGGGCCGAAAACC 59.927 57.895 0.00 0.00 0.00 3.27
2014 2100 1.375326 GAGTCTGGGCCGAAAACCT 59.625 57.895 0.00 0.00 0.00 3.50
2015 2101 0.611714 GAGTCTGGGCCGAAAACCTA 59.388 55.000 0.00 0.00 0.00 3.08
2016 2102 1.002773 GAGTCTGGGCCGAAAACCTAA 59.997 52.381 0.00 0.00 0.00 2.69
2017 2103 1.422402 AGTCTGGGCCGAAAACCTAAA 59.578 47.619 0.00 0.00 0.00 1.85
2018 2104 2.041216 AGTCTGGGCCGAAAACCTAAAT 59.959 45.455 0.00 0.00 0.00 1.40
2019 2105 3.264964 AGTCTGGGCCGAAAACCTAAATA 59.735 43.478 0.00 0.00 0.00 1.40
2020 2106 3.376234 GTCTGGGCCGAAAACCTAAATAC 59.624 47.826 0.00 0.00 0.00 1.89
2021 2107 3.264964 TCTGGGCCGAAAACCTAAATACT 59.735 43.478 0.00 0.00 0.00 2.12
2022 2108 4.014406 CTGGGCCGAAAACCTAAATACTT 58.986 43.478 0.00 0.00 0.00 2.24
2023 2109 5.045724 TCTGGGCCGAAAACCTAAATACTTA 60.046 40.000 0.00 0.00 0.00 2.24
2024 2110 5.568392 TGGGCCGAAAACCTAAATACTTAA 58.432 37.500 0.00 0.00 0.00 1.85
2025 2111 6.008960 TGGGCCGAAAACCTAAATACTTAAA 58.991 36.000 0.00 0.00 0.00 1.52
2026 2112 6.492772 TGGGCCGAAAACCTAAATACTTAAAA 59.507 34.615 0.00 0.00 0.00 1.52
2027 2113 6.808212 GGGCCGAAAACCTAAATACTTAAAAC 59.192 38.462 0.00 0.00 0.00 2.43
2028 2114 7.369607 GGCCGAAAACCTAAATACTTAAAACA 58.630 34.615 0.00 0.00 0.00 2.83
2029 2115 8.030692 GGCCGAAAACCTAAATACTTAAAACAT 58.969 33.333 0.00 0.00 0.00 2.71
2052 2138 8.506437 ACATATGACTTGGTGAAAATATATGCG 58.494 33.333 10.38 0.00 33.02 4.73
2053 2139 6.942532 ATGACTTGGTGAAAATATATGCGT 57.057 33.333 0.00 0.00 0.00 5.24
2054 2140 6.751514 TGACTTGGTGAAAATATATGCGTT 57.248 33.333 0.00 0.00 0.00 4.84
2055 2141 6.550843 TGACTTGGTGAAAATATATGCGTTG 58.449 36.000 0.00 0.00 0.00 4.10
2056 2142 5.339990 ACTTGGTGAAAATATATGCGTTGC 58.660 37.500 0.00 0.00 0.00 4.17
2057 2143 5.125417 ACTTGGTGAAAATATATGCGTTGCT 59.875 36.000 0.00 0.00 0.00 3.91
2058 2144 5.168526 TGGTGAAAATATATGCGTTGCTC 57.831 39.130 0.00 0.00 0.00 4.26
2059 2145 4.036262 TGGTGAAAATATATGCGTTGCTCC 59.964 41.667 0.00 0.00 0.00 4.70
2060 2146 4.537015 GTGAAAATATATGCGTTGCTCCC 58.463 43.478 0.00 0.00 0.00 4.30
2061 2147 4.275936 GTGAAAATATATGCGTTGCTCCCT 59.724 41.667 0.00 0.00 0.00 4.20
2062 2148 4.515191 TGAAAATATATGCGTTGCTCCCTC 59.485 41.667 0.00 0.00 0.00 4.30
2063 2149 2.770164 ATATATGCGTTGCTCCCTCC 57.230 50.000 0.00 0.00 0.00 4.30
2064 2150 1.419381 TATATGCGTTGCTCCCTCCA 58.581 50.000 0.00 0.00 0.00 3.86
2065 2151 0.767375 ATATGCGTTGCTCCCTCCAT 59.233 50.000 0.00 0.00 0.00 3.41
2066 2152 0.106708 TATGCGTTGCTCCCTCCATC 59.893 55.000 0.00 0.00 0.00 3.51
2067 2153 1.630126 ATGCGTTGCTCCCTCCATCT 61.630 55.000 0.00 0.00 0.00 2.90
2068 2154 1.522580 GCGTTGCTCCCTCCATCTC 60.523 63.158 0.00 0.00 0.00 2.75
2069 2155 1.900351 CGTTGCTCCCTCCATCTCA 59.100 57.895 0.00 0.00 0.00 3.27
2070 2156 0.250234 CGTTGCTCCCTCCATCTCAA 59.750 55.000 0.00 0.00 0.00 3.02
2071 2157 1.339055 CGTTGCTCCCTCCATCTCAAA 60.339 52.381 0.00 0.00 0.00 2.69
2072 2158 2.795329 GTTGCTCCCTCCATCTCAAAA 58.205 47.619 0.00 0.00 0.00 2.44
2073 2159 3.359950 GTTGCTCCCTCCATCTCAAAAT 58.640 45.455 0.00 0.00 0.00 1.82
2074 2160 4.526970 GTTGCTCCCTCCATCTCAAAATA 58.473 43.478 0.00 0.00 0.00 1.40
2075 2161 4.860802 TGCTCCCTCCATCTCAAAATAA 57.139 40.909 0.00 0.00 0.00 1.40
2076 2162 4.785301 TGCTCCCTCCATCTCAAAATAAG 58.215 43.478 0.00 0.00 0.00 1.73
2077 2163 4.228210 TGCTCCCTCCATCTCAAAATAAGT 59.772 41.667 0.00 0.00 0.00 2.24
2078 2164 4.578105 GCTCCCTCCATCTCAAAATAAGTG 59.422 45.833 0.00 0.00 0.00 3.16
2079 2165 4.526970 TCCCTCCATCTCAAAATAAGTGC 58.473 43.478 0.00 0.00 0.00 4.40
2080 2166 3.633986 CCCTCCATCTCAAAATAAGTGCC 59.366 47.826 0.00 0.00 0.00 5.01
2081 2167 4.272489 CCTCCATCTCAAAATAAGTGCCA 58.728 43.478 0.00 0.00 0.00 4.92
2082 2168 4.096984 CCTCCATCTCAAAATAAGTGCCAC 59.903 45.833 0.00 0.00 0.00 5.01
2083 2169 4.922206 TCCATCTCAAAATAAGTGCCACT 58.078 39.130 0.00 0.00 0.00 4.00
2084 2170 6.061022 TCCATCTCAAAATAAGTGCCACTA 57.939 37.500 0.00 0.00 0.00 2.74
2085 2171 6.480763 TCCATCTCAAAATAAGTGCCACTAA 58.519 36.000 0.00 0.00 0.00 2.24
2086 2172 6.945435 TCCATCTCAAAATAAGTGCCACTAAA 59.055 34.615 0.00 0.00 0.00 1.85
2087 2173 7.450014 TCCATCTCAAAATAAGTGCCACTAAAA 59.550 33.333 0.00 0.00 0.00 1.52
2088 2174 8.087750 CCATCTCAAAATAAGTGCCACTAAAAA 58.912 33.333 0.00 0.00 0.00 1.94
2089 2175 9.643693 CATCTCAAAATAAGTGCCACTAAAAAT 57.356 29.630 0.00 0.00 0.00 1.82
2143 2229 7.429636 TCCTTTTTGAGAAACACCTATAACG 57.570 36.000 0.00 0.00 0.00 3.18
2144 2230 6.993902 TCCTTTTTGAGAAACACCTATAACGT 59.006 34.615 0.00 0.00 0.00 3.99
2145 2231 7.172019 TCCTTTTTGAGAAACACCTATAACGTC 59.828 37.037 0.00 0.00 0.00 4.34
2146 2232 7.041644 CCTTTTTGAGAAACACCTATAACGTCA 60.042 37.037 0.00 0.00 0.00 4.35
2147 2233 7.972832 TTTTGAGAAACACCTATAACGTCAT 57.027 32.000 0.00 0.00 0.00 3.06
2148 2234 7.972832 TTTGAGAAACACCTATAACGTCATT 57.027 32.000 0.00 0.00 0.00 2.57
2149 2235 7.591006 TTGAGAAACACCTATAACGTCATTC 57.409 36.000 0.00 0.00 0.00 2.67
2150 2236 6.693466 TGAGAAACACCTATAACGTCATTCA 58.307 36.000 0.00 0.00 0.00 2.57
2151 2237 7.327975 TGAGAAACACCTATAACGTCATTCAT 58.672 34.615 0.00 0.00 0.00 2.57
2152 2238 8.471609 TGAGAAACACCTATAACGTCATTCATA 58.528 33.333 0.00 0.00 0.00 2.15
2153 2239 8.644318 AGAAACACCTATAACGTCATTCATAC 57.356 34.615 0.00 0.00 0.00 2.39
2154 2240 8.475639 AGAAACACCTATAACGTCATTCATACT 58.524 33.333 0.00 0.00 0.00 2.12
2155 2241 8.644318 AAACACCTATAACGTCATTCATACTC 57.356 34.615 0.00 0.00 0.00 2.59
2156 2242 7.342769 ACACCTATAACGTCATTCATACTCA 57.657 36.000 0.00 0.00 0.00 3.41
2157 2243 7.952671 ACACCTATAACGTCATTCATACTCAT 58.047 34.615 0.00 0.00 0.00 2.90
2158 2244 9.074576 ACACCTATAACGTCATTCATACTCATA 57.925 33.333 0.00 0.00 0.00 2.15
2159 2245 9.561270 CACCTATAACGTCATTCATACTCATAG 57.439 37.037 0.00 0.00 0.00 2.23
2160 2246 9.298250 ACCTATAACGTCATTCATACTCATAGT 57.702 33.333 0.00 0.00 0.00 2.12
2161 2247 9.561270 CCTATAACGTCATTCATACTCATAGTG 57.439 37.037 0.00 0.00 0.00 2.74
2162 2248 9.561270 CTATAACGTCATTCATACTCATAGTGG 57.439 37.037 0.00 0.00 0.00 4.00
2163 2249 4.621991 ACGTCATTCATACTCATAGTGGC 58.378 43.478 0.00 0.00 0.00 5.01
2164 2250 3.670523 CGTCATTCATACTCATAGTGGCG 59.329 47.826 0.00 0.00 0.00 5.69
2165 2251 3.990469 GTCATTCATACTCATAGTGGCGG 59.010 47.826 0.00 0.00 0.00 6.13
2166 2252 3.895041 TCATTCATACTCATAGTGGCGGA 59.105 43.478 0.00 0.00 0.00 5.54
2167 2253 4.021981 TCATTCATACTCATAGTGGCGGAG 60.022 45.833 0.00 0.00 34.85 4.63
2168 2254 3.223674 TCATACTCATAGTGGCGGAGA 57.776 47.619 0.00 0.00 33.00 3.71
2169 2255 2.885266 TCATACTCATAGTGGCGGAGAC 59.115 50.000 0.00 0.00 33.00 3.36
2192 2278 3.483869 GACCAGCAGGGGCCCTAG 61.484 72.222 28.28 20.45 39.68 3.02
2217 2303 5.388599 CCCCCTAACATCAAGGATTTACT 57.611 43.478 0.00 0.00 36.08 2.24
2218 2304 6.509523 CCCCCTAACATCAAGGATTTACTA 57.490 41.667 0.00 0.00 36.08 1.82
2219 2305 6.296803 CCCCCTAACATCAAGGATTTACTAC 58.703 44.000 0.00 0.00 36.08 2.73
2220 2306 6.101296 CCCCCTAACATCAAGGATTTACTACT 59.899 42.308 0.00 0.00 36.08 2.57
2221 2307 7.291651 CCCCCTAACATCAAGGATTTACTACTA 59.708 40.741 0.00 0.00 36.08 1.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
13 14 1.153588 TACGTTCCCGAAATCGCCC 60.154 57.895 0.00 0.00 38.18 6.13
54 55 6.011122 AGAGATAGGCAGTTGGAATTCATT 57.989 37.500 7.93 0.00 0.00 2.57
57 58 5.070313 AGAGAGAGATAGGCAGTTGGAATTC 59.930 44.000 0.00 0.00 0.00 2.17
79 80 0.456221 GACCAAATCGCGGAGAGAGA 59.544 55.000 6.13 0.00 41.36 3.10
80 81 0.173481 TGACCAAATCGCGGAGAGAG 59.827 55.000 6.13 0.00 41.36 3.20
190 199 4.980805 TGGGCGACGACAAGGTGC 62.981 66.667 1.63 0.00 0.00 5.01
191 200 2.280524 TTGGGCGACGACAAGGTG 60.281 61.111 1.63 0.00 0.00 4.00
192 201 2.280592 GTTGGGCGACGACAAGGT 60.281 61.111 1.63 0.00 33.39 3.50
193 202 2.280524 TGTTGGGCGACGACAAGG 60.281 61.111 1.63 0.00 40.53 3.61
194 203 0.878523 TTCTGTTGGGCGACGACAAG 60.879 55.000 1.63 0.00 42.82 3.16
269 281 4.476297 TGTCGGTGAGCTCCCTAATTATA 58.524 43.478 12.15 0.00 0.00 0.98
276 288 1.207329 GTATTTGTCGGTGAGCTCCCT 59.793 52.381 12.15 0.00 0.00 4.20
291 303 2.954316 TGACGTCGTGATGCTGTATTT 58.046 42.857 11.62 0.00 0.00 1.40
292 304 2.647529 TGACGTCGTGATGCTGTATT 57.352 45.000 11.62 0.00 0.00 1.89
408 420 8.970691 ATAAACAAAGTAAAGCATGCTGTAAG 57.029 30.769 23.48 12.82 0.00 2.34
453 466 8.983724 GGAGAAAGTACAAATCTACATATCTGC 58.016 37.037 0.00 0.00 0.00 4.26
454 467 9.186323 CGGAGAAAGTACAAATCTACATATCTG 57.814 37.037 0.00 0.00 0.00 2.90
475 533 5.244402 TGTGGTAAGTAATTCAGAACGGAGA 59.756 40.000 0.00 0.00 0.00 3.71
495 553 8.519492 ACATTCGTTTTTATTGATTTCTGTGG 57.481 30.769 0.00 0.00 0.00 4.17
553 611 8.649810 ACGTTTGAAATTACTTATTGCGTAAG 57.350 30.769 7.03 7.03 44.41 2.34
557 615 6.685403 CCCTACGTTTGAAATTACTTATTGCG 59.315 38.462 0.00 0.00 0.00 4.85
573 631 3.362706 TCATCTGCTACTCCCTACGTTT 58.637 45.455 0.00 0.00 0.00 3.60
574 632 2.952978 CTCATCTGCTACTCCCTACGTT 59.047 50.000 0.00 0.00 0.00 3.99
577 635 3.292460 ACACTCATCTGCTACTCCCTAC 58.708 50.000 0.00 0.00 0.00 3.18
578 636 3.671740 ACACTCATCTGCTACTCCCTA 57.328 47.619 0.00 0.00 0.00 3.53
579 637 2.499289 CAACACTCATCTGCTACTCCCT 59.501 50.000 0.00 0.00 0.00 4.20
582 640 4.991056 TGAAACAACACTCATCTGCTACTC 59.009 41.667 0.00 0.00 0.00 2.59
588 648 9.903682 ATTAAGATTTGAAACAACACTCATCTG 57.096 29.630 0.00 0.00 0.00 2.90
647 707 2.910482 CGTCAACATAACAAGCACATGC 59.090 45.455 0.00 0.00 42.49 4.06
652 712 1.598882 TGGCGTCAACATAACAAGCA 58.401 45.000 0.00 0.00 0.00 3.91
654 714 4.418013 TTCATGGCGTCAACATAACAAG 57.582 40.909 0.00 0.00 0.00 3.16
655 715 4.837896 TTTCATGGCGTCAACATAACAA 57.162 36.364 0.00 0.00 0.00 2.83
676 736 7.648112 GTCAGAAAAGGCGAGAAAATAAGTTTT 59.352 33.333 0.00 0.00 40.13 2.43
677 737 7.139392 GTCAGAAAAGGCGAGAAAATAAGTTT 58.861 34.615 0.00 0.00 0.00 2.66
693 753 9.932699 CTAGAGCATGATAAATTGTCAGAAAAG 57.067 33.333 0.00 0.00 0.00 2.27
704 764 8.897752 GTTTTGGTTCTCTAGAGCATGATAAAT 58.102 33.333 15.35 0.00 0.00 1.40
761 822 1.338674 CGCATTACCACTGTTCCTCCA 60.339 52.381 0.00 0.00 0.00 3.86
762 823 1.066430 TCGCATTACCACTGTTCCTCC 60.066 52.381 0.00 0.00 0.00 4.30
794 855 1.517694 CCAGTTGCATGCATTCCGC 60.518 57.895 23.37 9.64 42.89 5.54
798 859 1.687660 TGACAACCAGTTGCATGCATT 59.312 42.857 23.37 9.65 44.03 3.56
811 872 2.367344 GCGACGTACGGTGACAACC 61.367 63.158 21.06 0.00 43.76 3.77
812 873 2.367344 GGCGACGTACGGTGACAAC 61.367 63.158 21.06 1.35 42.83 3.32
962 1025 0.796312 GTACGTAACCTGTCGACGGA 59.204 55.000 26.01 2.72 40.84 4.69
968 1031 1.668253 GCGCACGTACGTAACCTGTC 61.668 60.000 22.34 4.18 34.88 3.51
1152 1215 3.511595 CATGCCTCGCCGCACATT 61.512 61.111 0.00 0.00 42.70 2.71
1213 1291 2.317973 GTAGGGATCGGCTTAAGAGGT 58.682 52.381 6.67 0.00 0.00 3.85
1216 1294 1.679680 CACGTAGGGATCGGCTTAAGA 59.320 52.381 6.67 0.00 0.00 2.10
1220 1298 1.515954 CACACGTAGGGATCGGCTT 59.484 57.895 0.00 0.00 0.00 4.35
1259 1337 1.977188 CGTATCTTGAGTCGTGTGCA 58.023 50.000 0.00 0.00 0.00 4.57
1266 1344 1.110876 GTACGCGCGTATCTTGAGTC 58.889 55.000 40.91 23.77 32.82 3.36
1315 1394 1.527696 GAATGAACGAACAGCATGCG 58.472 50.000 13.01 9.99 42.53 4.73
1336 1421 5.183331 TCAACAAGAACTAGCTAGTCACGAT 59.817 40.000 26.21 10.80 34.99 3.73
1370 1455 5.350633 CAGGTTGCAAATCAAAGACAAGAA 58.649 37.500 0.00 0.00 36.26 2.52
1604 1690 3.181475 CCAACATACAGGAGATACAGCGT 60.181 47.826 0.00 0.00 0.00 5.07
1618 1704 3.138304 TGTGTCTGCTTGACCAACATAC 58.862 45.455 7.71 0.63 44.75 2.39
1622 1708 3.403038 ACTATGTGTCTGCTTGACCAAC 58.597 45.455 7.71 2.33 44.75 3.77
1624 1710 4.283467 ACTTACTATGTGTCTGCTTGACCA 59.717 41.667 7.71 6.18 44.75 4.02
1634 1720 9.073368 CGGCAACATATATACTTACTATGTGTC 57.927 37.037 0.00 0.00 36.48 3.67
1635 1721 8.799367 TCGGCAACATATATACTTACTATGTGT 58.201 33.333 0.00 0.00 36.48 3.72
1636 1722 9.290483 CTCGGCAACATATATACTTACTATGTG 57.710 37.037 0.00 0.00 36.48 3.21
1637 1723 9.021807 ACTCGGCAACATATATACTTACTATGT 57.978 33.333 0.00 0.00 37.62 2.29
1638 1724 9.856488 AACTCGGCAACATATATACTTACTATG 57.144 33.333 0.00 0.00 0.00 2.23
1640 1726 9.070179 TGAACTCGGCAACATATATACTTACTA 57.930 33.333 0.00 0.00 0.00 1.82
1641 1727 7.948357 TGAACTCGGCAACATATATACTTACT 58.052 34.615 0.00 0.00 0.00 2.24
1642 1728 8.583810 TTGAACTCGGCAACATATATACTTAC 57.416 34.615 0.00 0.00 0.00 2.34
1643 1729 9.602568 TTTTGAACTCGGCAACATATATACTTA 57.397 29.630 0.00 0.00 0.00 2.24
1644 1730 8.500753 TTTTGAACTCGGCAACATATATACTT 57.499 30.769 0.00 0.00 0.00 2.24
1645 1731 8.500753 TTTTTGAACTCGGCAACATATATACT 57.499 30.769 0.00 0.00 0.00 2.12
1670 1756 5.220529 GGAGTGCGCAACGTATATACTTTTT 60.221 40.000 14.00 0.00 0.00 1.94
1671 1757 4.269363 GGAGTGCGCAACGTATATACTTTT 59.731 41.667 14.00 1.62 0.00 2.27
1672 1758 3.800506 GGAGTGCGCAACGTATATACTTT 59.199 43.478 14.00 5.11 0.00 2.66
1673 1759 3.181484 TGGAGTGCGCAACGTATATACTT 60.181 43.478 14.00 0.00 0.00 2.24
1674 1760 2.359848 TGGAGTGCGCAACGTATATACT 59.640 45.455 14.00 0.02 0.00 2.12
1675 1761 2.734670 TGGAGTGCGCAACGTATATAC 58.265 47.619 14.00 2.53 0.00 1.47
1676 1762 3.243602 ACATGGAGTGCGCAACGTATATA 60.244 43.478 14.00 0.00 0.00 0.86
1677 1763 2.135139 CATGGAGTGCGCAACGTATAT 58.865 47.619 14.00 0.00 0.00 0.86
1678 1764 1.134936 ACATGGAGTGCGCAACGTATA 60.135 47.619 14.00 0.00 0.00 1.47
1679 1765 0.391130 ACATGGAGTGCGCAACGTAT 60.391 50.000 14.00 1.59 0.00 3.06
1680 1766 1.005512 ACATGGAGTGCGCAACGTA 60.006 52.632 14.00 0.00 0.00 3.57
1681 1767 2.280797 ACATGGAGTGCGCAACGT 60.281 55.556 14.00 3.96 0.00 3.99
1682 1768 2.174107 CACATGGAGTGCGCAACG 59.826 61.111 14.00 0.00 42.15 4.10
1700 1786 3.004419 CGGGAAGAGAAAAGGTTTCCAAC 59.996 47.826 4.69 0.00 40.65 3.77
1701 1787 3.219281 CGGGAAGAGAAAAGGTTTCCAA 58.781 45.455 4.69 0.00 40.65 3.53
1702 1788 2.173996 ACGGGAAGAGAAAAGGTTTCCA 59.826 45.455 4.69 0.00 40.65 3.53
1703 1789 2.860009 ACGGGAAGAGAAAAGGTTTCC 58.140 47.619 0.00 0.00 38.66 3.13
1704 1790 4.084171 CGTAACGGGAAGAGAAAAGGTTTC 60.084 45.833 0.00 0.00 0.00 2.78
1705 1791 3.811497 CGTAACGGGAAGAGAAAAGGTTT 59.189 43.478 0.00 0.00 0.00 3.27
1706 1792 3.070015 TCGTAACGGGAAGAGAAAAGGTT 59.930 43.478 0.00 0.00 0.00 3.50
1707 1793 2.629617 TCGTAACGGGAAGAGAAAAGGT 59.370 45.455 0.00 0.00 0.00 3.50
1708 1794 3.308438 TCGTAACGGGAAGAGAAAAGG 57.692 47.619 0.00 0.00 0.00 3.11
1709 1795 4.304939 AGTTCGTAACGGGAAGAGAAAAG 58.695 43.478 0.00 0.00 36.23 2.27
1710 1796 4.301628 GAGTTCGTAACGGGAAGAGAAAA 58.698 43.478 0.00 0.00 36.23 2.29
1711 1797 3.305608 GGAGTTCGTAACGGGAAGAGAAA 60.306 47.826 0.00 0.00 36.23 2.52
1712 1798 2.229784 GGAGTTCGTAACGGGAAGAGAA 59.770 50.000 0.00 0.00 36.23 2.87
1713 1799 1.815003 GGAGTTCGTAACGGGAAGAGA 59.185 52.381 0.00 0.00 36.23 3.10
1714 1800 1.817447 AGGAGTTCGTAACGGGAAGAG 59.183 52.381 0.00 0.00 36.23 2.85
1715 1801 1.915141 AGGAGTTCGTAACGGGAAGA 58.085 50.000 0.00 0.00 36.23 2.87
1716 1802 2.738013 AAGGAGTTCGTAACGGGAAG 57.262 50.000 0.00 0.00 36.23 3.46
1717 1803 3.473923 AAAAGGAGTTCGTAACGGGAA 57.526 42.857 0.00 0.00 36.23 3.97
1718 1804 4.280677 TCTTAAAAGGAGTTCGTAACGGGA 59.719 41.667 0.00 0.00 36.23 5.14
1719 1805 4.559153 TCTTAAAAGGAGTTCGTAACGGG 58.441 43.478 0.00 0.00 36.23 5.28
1720 1806 6.529463 TTTCTTAAAAGGAGTTCGTAACGG 57.471 37.500 0.00 0.00 36.23 4.44
1721 1807 9.897349 GATATTTCTTAAAAGGAGTTCGTAACG 57.103 33.333 0.00 0.00 36.23 3.18
1722 1808 9.897349 CGATATTTCTTAAAAGGAGTTCGTAAC 57.103 33.333 0.00 0.00 0.00 2.50
1723 1809 8.598075 GCGATATTTCTTAAAAGGAGTTCGTAA 58.402 33.333 0.00 0.00 0.00 3.18
1724 1810 7.223387 GGCGATATTTCTTAAAAGGAGTTCGTA 59.777 37.037 0.00 0.00 0.00 3.43
1725 1811 6.036844 GGCGATATTTCTTAAAAGGAGTTCGT 59.963 38.462 0.00 0.00 0.00 3.85
1726 1812 6.419771 GGCGATATTTCTTAAAAGGAGTTCG 58.580 40.000 0.00 0.00 0.00 3.95
1727 1813 6.542735 AGGGCGATATTTCTTAAAAGGAGTTC 59.457 38.462 0.00 0.00 0.00 3.01
1728 1814 6.424032 AGGGCGATATTTCTTAAAAGGAGTT 58.576 36.000 0.00 0.00 0.00 3.01
1729 1815 6.002653 AGGGCGATATTTCTTAAAAGGAGT 57.997 37.500 0.00 0.00 0.00 3.85
1730 1816 5.470437 GGAGGGCGATATTTCTTAAAAGGAG 59.530 44.000 0.00 0.00 0.00 3.69
1731 1817 5.374071 GGAGGGCGATATTTCTTAAAAGGA 58.626 41.667 0.00 0.00 0.00 3.36
1732 1818 4.213482 CGGAGGGCGATATTTCTTAAAAGG 59.787 45.833 0.00 0.00 0.00 3.11
1733 1819 4.814771 ACGGAGGGCGATATTTCTTAAAAG 59.185 41.667 0.00 0.00 0.00 2.27
1734 1820 4.773013 ACGGAGGGCGATATTTCTTAAAA 58.227 39.130 0.00 0.00 0.00 1.52
1735 1821 4.374399 GACGGAGGGCGATATTTCTTAAA 58.626 43.478 0.00 0.00 0.00 1.52
1736 1822 3.243975 GGACGGAGGGCGATATTTCTTAA 60.244 47.826 0.00 0.00 0.00 1.85
1737 1823 2.298163 GGACGGAGGGCGATATTTCTTA 59.702 50.000 0.00 0.00 0.00 2.10
1738 1824 1.070289 GGACGGAGGGCGATATTTCTT 59.930 52.381 0.00 0.00 0.00 2.52
1739 1825 0.680061 GGACGGAGGGCGATATTTCT 59.320 55.000 0.00 0.00 0.00 2.52
1740 1826 0.666577 CGGACGGAGGGCGATATTTC 60.667 60.000 0.00 0.00 0.00 2.17
1741 1827 1.111116 TCGGACGGAGGGCGATATTT 61.111 55.000 0.00 0.00 0.00 1.40
1742 1828 1.111116 TTCGGACGGAGGGCGATATT 61.111 55.000 0.00 0.00 0.00 1.28
1743 1829 1.111116 TTTCGGACGGAGGGCGATAT 61.111 55.000 0.00 0.00 0.00 1.63
1744 1830 1.321805 TTTTCGGACGGAGGGCGATA 61.322 55.000 0.00 0.00 0.00 2.92
1745 1831 2.175035 TTTTTCGGACGGAGGGCGAT 62.175 55.000 0.00 0.00 0.00 4.58
1746 1832 2.175035 ATTTTTCGGACGGAGGGCGA 62.175 55.000 0.00 0.00 0.00 5.54
1747 1833 1.303091 AATTTTTCGGACGGAGGGCG 61.303 55.000 0.00 0.00 0.00 6.13
1748 1834 0.885879 AAATTTTTCGGACGGAGGGC 59.114 50.000 0.00 0.00 0.00 5.19
1749 1835 1.883926 ACAAATTTTTCGGACGGAGGG 59.116 47.619 0.00 0.00 0.00 4.30
1750 1836 3.636282 AACAAATTTTTCGGACGGAGG 57.364 42.857 0.00 0.00 0.00 4.30
1751 1837 4.855531 AGAAACAAATTTTTCGGACGGAG 58.144 39.130 0.00 0.00 39.96 4.63
1752 1838 4.335874 TGAGAAACAAATTTTTCGGACGGA 59.664 37.500 0.00 0.00 39.96 4.69
1753 1839 4.602995 TGAGAAACAAATTTTTCGGACGG 58.397 39.130 0.00 0.00 39.96 4.79
1754 1840 6.561945 TTTGAGAAACAAATTTTTCGGACG 57.438 33.333 0.00 0.00 42.57 4.79
1766 1852 9.230122 TGCTAGATACATTCATTTGAGAAACAA 57.770 29.630 0.00 0.00 36.65 2.83
1767 1853 8.791327 TGCTAGATACATTCATTTGAGAAACA 57.209 30.769 0.00 0.00 0.00 2.83
1768 1854 9.875675 GATGCTAGATACATTCATTTGAGAAAC 57.124 33.333 0.00 0.00 0.00 2.78
1769 1855 9.617523 TGATGCTAGATACATTCATTTGAGAAA 57.382 29.630 0.00 0.00 0.00 2.52
1770 1856 9.617523 TTGATGCTAGATACATTCATTTGAGAA 57.382 29.630 0.00 0.00 0.00 2.87
1771 1857 9.269453 CTTGATGCTAGATACATTCATTTGAGA 57.731 33.333 0.00 0.00 0.00 3.27
1772 1858 9.053840 ACTTGATGCTAGATACATTCATTTGAG 57.946 33.333 0.00 0.00 0.00 3.02
1773 1859 8.969260 ACTTGATGCTAGATACATTCATTTGA 57.031 30.769 0.00 0.00 0.00 2.69
1777 1863 9.486497 CACTAACTTGATGCTAGATACATTCAT 57.514 33.333 0.00 0.00 0.00 2.57
1778 1864 8.478066 ACACTAACTTGATGCTAGATACATTCA 58.522 33.333 0.00 0.00 0.00 2.57
1779 1865 8.879342 ACACTAACTTGATGCTAGATACATTC 57.121 34.615 0.00 0.00 0.00 2.67
1781 1867 9.973450 CTAACACTAACTTGATGCTAGATACAT 57.027 33.333 0.00 0.00 0.00 2.29
1782 1868 9.185680 TCTAACACTAACTTGATGCTAGATACA 57.814 33.333 0.00 0.00 0.00 2.29
1786 1872 9.185680 TGTATCTAACACTAACTTGATGCTAGA 57.814 33.333 0.00 0.00 31.43 2.43
1787 1873 9.973450 ATGTATCTAACACTAACTTGATGCTAG 57.027 33.333 0.00 0.00 42.09 3.42
1788 1874 9.967346 GATGTATCTAACACTAACTTGATGCTA 57.033 33.333 0.00 0.00 42.09 3.49
1789 1875 8.478066 TGATGTATCTAACACTAACTTGATGCT 58.522 33.333 0.00 0.00 42.09 3.79
1790 1876 8.648557 TGATGTATCTAACACTAACTTGATGC 57.351 34.615 0.00 0.00 42.09 3.91
1800 1886 9.614792 GTCCCTTAAATTGATGTATCTAACACT 57.385 33.333 0.00 0.00 42.09 3.55
1801 1887 9.391006 TGTCCCTTAAATTGATGTATCTAACAC 57.609 33.333 0.00 0.00 42.09 3.32
1808 1894 9.354673 CCAAGTATGTCCCTTAAATTGATGTAT 57.645 33.333 0.00 0.00 0.00 2.29
1809 1895 8.553153 TCCAAGTATGTCCCTTAAATTGATGTA 58.447 33.333 0.00 0.00 0.00 2.29
1810 1896 7.410174 TCCAAGTATGTCCCTTAAATTGATGT 58.590 34.615 0.00 0.00 0.00 3.06
1811 1897 7.880160 TCCAAGTATGTCCCTTAAATTGATG 57.120 36.000 0.00 0.00 0.00 3.07
1812 1898 7.893302 TGTTCCAAGTATGTCCCTTAAATTGAT 59.107 33.333 0.00 0.00 0.00 2.57
1813 1899 7.235079 TGTTCCAAGTATGTCCCTTAAATTGA 58.765 34.615 0.00 0.00 0.00 2.57
1814 1900 7.461182 TGTTCCAAGTATGTCCCTTAAATTG 57.539 36.000 0.00 0.00 0.00 2.32
1815 1901 7.728532 ACTTGTTCCAAGTATGTCCCTTAAATT 59.271 33.333 7.80 0.00 0.00 1.82
1816 1902 7.238710 ACTTGTTCCAAGTATGTCCCTTAAAT 58.761 34.615 7.80 0.00 0.00 1.40
1817 1903 6.607019 ACTTGTTCCAAGTATGTCCCTTAAA 58.393 36.000 7.80 0.00 0.00 1.52
1818 1904 6.195600 ACTTGTTCCAAGTATGTCCCTTAA 57.804 37.500 7.80 0.00 0.00 1.85
1819 1905 5.836024 ACTTGTTCCAAGTATGTCCCTTA 57.164 39.130 7.80 0.00 0.00 2.69
1820 1906 4.724279 ACTTGTTCCAAGTATGTCCCTT 57.276 40.909 7.80 0.00 0.00 3.95
1821 1907 4.724279 AACTTGTTCCAAGTATGTCCCT 57.276 40.909 9.82 0.00 0.00 4.20
1822 1908 5.784578 AAAACTTGTTCCAAGTATGTCCC 57.215 39.130 9.82 0.00 0.00 4.46
1842 1928 4.582701 TGTACTCTTACCGTCCGAAAAA 57.417 40.909 0.00 0.00 0.00 1.94
1843 1929 4.582701 TTGTACTCTTACCGTCCGAAAA 57.417 40.909 0.00 0.00 0.00 2.29
1844 1930 4.487948 CATTGTACTCTTACCGTCCGAAA 58.512 43.478 0.00 0.00 0.00 3.46
1845 1931 3.674138 GCATTGTACTCTTACCGTCCGAA 60.674 47.826 0.00 0.00 0.00 4.30
1846 1932 2.159338 GCATTGTACTCTTACCGTCCGA 60.159 50.000 0.00 0.00 0.00 4.55
1847 1933 2.190981 GCATTGTACTCTTACCGTCCG 58.809 52.381 0.00 0.00 0.00 4.79
1848 1934 3.119245 TCTGCATTGTACTCTTACCGTCC 60.119 47.826 0.00 0.00 0.00 4.79
1849 1935 4.106029 TCTGCATTGTACTCTTACCGTC 57.894 45.455 0.00 0.00 0.00 4.79
1850 1936 4.737855 ATCTGCATTGTACTCTTACCGT 57.262 40.909 0.00 0.00 0.00 4.83
1851 1937 5.833082 AGTATCTGCATTGTACTCTTACCG 58.167 41.667 0.00 0.00 0.00 4.02
1852 1938 6.697892 GTGAGTATCTGCATTGTACTCTTACC 59.302 42.308 22.84 11.83 42.89 2.85
1853 1939 7.221067 GTGTGAGTATCTGCATTGTACTCTTAC 59.779 40.741 22.84 18.92 42.89 2.34
1854 1940 7.258441 GTGTGAGTATCTGCATTGTACTCTTA 58.742 38.462 22.84 14.46 42.89 2.10
1855 1941 6.102663 GTGTGAGTATCTGCATTGTACTCTT 58.897 40.000 22.84 1.29 42.89 2.85
1856 1942 5.655488 GTGTGAGTATCTGCATTGTACTCT 58.345 41.667 22.84 4.51 42.89 3.24
1857 1943 4.500837 CGTGTGAGTATCTGCATTGTACTC 59.499 45.833 18.84 18.84 42.81 2.59
1858 1944 4.082190 ACGTGTGAGTATCTGCATTGTACT 60.082 41.667 5.73 5.73 34.92 2.73
1859 1945 4.174009 ACGTGTGAGTATCTGCATTGTAC 58.826 43.478 0.00 0.00 34.92 2.90
1860 1946 4.450082 ACGTGTGAGTATCTGCATTGTA 57.550 40.909 0.00 0.00 34.92 2.41
1861 1947 3.319137 ACGTGTGAGTATCTGCATTGT 57.681 42.857 0.00 0.00 34.92 2.71
1862 1948 3.798878 CCTACGTGTGAGTATCTGCATTG 59.201 47.826 0.00 0.00 34.92 2.82
1863 1949 3.699538 TCCTACGTGTGAGTATCTGCATT 59.300 43.478 0.00 0.00 34.92 3.56
1864 1950 3.288092 TCCTACGTGTGAGTATCTGCAT 58.712 45.455 0.00 0.00 34.92 3.96
1865 1951 2.718563 TCCTACGTGTGAGTATCTGCA 58.281 47.619 0.00 0.00 34.92 4.41
1866 1952 3.992260 ATCCTACGTGTGAGTATCTGC 57.008 47.619 0.00 0.00 34.92 4.26
1867 1953 5.306394 TCCTATCCTACGTGTGAGTATCTG 58.694 45.833 0.00 0.00 34.92 2.90
1868 1954 5.563876 TCCTATCCTACGTGTGAGTATCT 57.436 43.478 0.00 0.00 34.92 1.98
1869 1955 5.530171 TGTTCCTATCCTACGTGTGAGTATC 59.470 44.000 0.00 0.00 0.00 2.24
1870 1956 5.298777 GTGTTCCTATCCTACGTGTGAGTAT 59.701 44.000 0.00 0.00 0.00 2.12
1871 1957 4.637534 GTGTTCCTATCCTACGTGTGAGTA 59.362 45.833 0.00 0.00 0.00 2.59
1872 1958 3.442977 GTGTTCCTATCCTACGTGTGAGT 59.557 47.826 0.00 0.00 0.00 3.41
1873 1959 3.181489 GGTGTTCCTATCCTACGTGTGAG 60.181 52.174 0.00 0.00 0.00 3.51
1874 1960 2.756760 GGTGTTCCTATCCTACGTGTGA 59.243 50.000 0.00 0.00 0.00 3.58
1875 1961 2.494471 TGGTGTTCCTATCCTACGTGTG 59.506 50.000 0.00 0.00 34.23 3.82
1876 1962 2.494870 GTGGTGTTCCTATCCTACGTGT 59.505 50.000 0.00 0.00 34.23 4.49
1877 1963 2.159142 GGTGGTGTTCCTATCCTACGTG 60.159 54.545 0.00 0.00 34.23 4.49
1878 1964 2.105766 GGTGGTGTTCCTATCCTACGT 58.894 52.381 0.00 0.00 34.23 3.57
1879 1965 1.066605 CGGTGGTGTTCCTATCCTACG 59.933 57.143 0.00 0.00 34.23 3.51
1880 1966 1.202498 GCGGTGGTGTTCCTATCCTAC 60.202 57.143 0.00 0.00 34.23 3.18
1881 1967 1.117150 GCGGTGGTGTTCCTATCCTA 58.883 55.000 0.00 0.00 34.23 2.94
1882 1968 1.623542 GGCGGTGGTGTTCCTATCCT 61.624 60.000 0.00 0.00 34.23 3.24
1883 1969 1.153229 GGCGGTGGTGTTCCTATCC 60.153 63.158 0.00 0.00 34.23 2.59
1884 1970 0.743345 GTGGCGGTGGTGTTCCTATC 60.743 60.000 0.00 0.00 34.23 2.08
1885 1971 1.298667 GTGGCGGTGGTGTTCCTAT 59.701 57.895 0.00 0.00 34.23 2.57
1886 1972 2.141448 TGTGGCGGTGGTGTTCCTA 61.141 57.895 0.00 0.00 34.23 2.94
1887 1973 3.484806 TGTGGCGGTGGTGTTCCT 61.485 61.111 0.00 0.00 34.23 3.36
1888 1974 3.284449 GTGTGGCGGTGGTGTTCC 61.284 66.667 0.00 0.00 0.00 3.62
1889 1975 0.533308 TAAGTGTGGCGGTGGTGTTC 60.533 55.000 0.00 0.00 0.00 3.18
1890 1976 0.816421 GTAAGTGTGGCGGTGGTGTT 60.816 55.000 0.00 0.00 0.00 3.32
1891 1977 1.227734 GTAAGTGTGGCGGTGGTGT 60.228 57.895 0.00 0.00 0.00 4.16
1892 1978 1.070786 AGTAAGTGTGGCGGTGGTG 59.929 57.895 0.00 0.00 0.00 4.17
1893 1979 1.070786 CAGTAAGTGTGGCGGTGGT 59.929 57.895 0.00 0.00 0.00 4.16
1894 1980 0.949105 GACAGTAAGTGTGGCGGTGG 60.949 60.000 0.00 0.00 40.56 4.61
1895 1981 0.249699 TGACAGTAAGTGTGGCGGTG 60.250 55.000 0.00 0.00 40.56 4.94
1896 1982 0.249741 GTGACAGTAAGTGTGGCGGT 60.250 55.000 0.00 0.00 40.56 5.68
1897 1983 0.249699 TGTGACAGTAAGTGTGGCGG 60.250 55.000 0.00 0.00 40.56 6.13
1898 1984 0.859232 GTGTGACAGTAAGTGTGGCG 59.141 55.000 0.00 0.00 40.56 5.69
1899 1985 1.948104 TGTGTGACAGTAAGTGTGGC 58.052 50.000 0.00 0.00 40.56 5.01
1900 1986 3.876914 ACATTGTGTGACAGTAAGTGTGG 59.123 43.478 0.00 0.00 40.56 4.17
1901 1987 4.811024 AGACATTGTGTGACAGTAAGTGTG 59.189 41.667 0.00 0.00 40.56 3.82
1902 1988 5.023533 AGACATTGTGTGACAGTAAGTGT 57.976 39.130 0.00 0.00 44.49 3.55
1903 1989 6.216569 AGTAGACATTGTGTGACAGTAAGTG 58.783 40.000 0.00 0.00 0.00 3.16
1904 1990 6.406692 AGTAGACATTGTGTGACAGTAAGT 57.593 37.500 0.00 0.00 0.00 2.24
1905 1991 7.715265 AAAGTAGACATTGTGTGACAGTAAG 57.285 36.000 0.00 0.00 0.00 2.34
1906 1992 8.418662 ACTAAAGTAGACATTGTGTGACAGTAA 58.581 33.333 0.00 0.00 0.00 2.24
1907 1993 7.865889 CACTAAAGTAGACATTGTGTGACAGTA 59.134 37.037 0.00 0.00 0.00 2.74
1908 1994 6.701841 CACTAAAGTAGACATTGTGTGACAGT 59.298 38.462 0.00 0.00 0.00 3.55
1909 1995 6.701841 ACACTAAAGTAGACATTGTGTGACAG 59.298 38.462 0.00 0.00 36.10 3.51
1910 1996 6.578944 ACACTAAAGTAGACATTGTGTGACA 58.421 36.000 0.00 0.00 36.10 3.58
1914 2000 5.989777 GTCCACACTAAAGTAGACATTGTGT 59.010 40.000 0.00 0.00 37.61 3.72
1915 2001 5.118664 CGTCCACACTAAAGTAGACATTGTG 59.881 44.000 0.00 0.00 32.19 3.33
1916 2002 5.221382 ACGTCCACACTAAAGTAGACATTGT 60.221 40.000 0.00 0.00 0.00 2.71
1917 2003 5.227908 ACGTCCACACTAAAGTAGACATTG 58.772 41.667 0.00 0.00 0.00 2.82
1918 2004 5.464030 ACGTCCACACTAAAGTAGACATT 57.536 39.130 0.00 0.00 0.00 2.71
1919 2005 5.125097 CCTACGTCCACACTAAAGTAGACAT 59.875 44.000 0.00 0.00 35.02 3.06
1920 2006 4.456911 CCTACGTCCACACTAAAGTAGACA 59.543 45.833 0.00 0.00 35.02 3.41
1921 2007 4.673841 GCCTACGTCCACACTAAAGTAGAC 60.674 50.000 0.00 0.00 35.02 2.59
1922 2008 3.441572 GCCTACGTCCACACTAAAGTAGA 59.558 47.826 0.00 0.00 35.02 2.59
1923 2009 3.192001 TGCCTACGTCCACACTAAAGTAG 59.808 47.826 0.00 0.00 33.42 2.57
1924 2010 3.156293 TGCCTACGTCCACACTAAAGTA 58.844 45.455 0.00 0.00 0.00 2.24
1925 2011 1.965643 TGCCTACGTCCACACTAAAGT 59.034 47.619 0.00 0.00 0.00 2.66
1926 2012 2.736144 TGCCTACGTCCACACTAAAG 57.264 50.000 0.00 0.00 0.00 1.85
1927 2013 2.354303 CCATGCCTACGTCCACACTAAA 60.354 50.000 0.00 0.00 0.00 1.85
1928 2014 1.206132 CCATGCCTACGTCCACACTAA 59.794 52.381 0.00 0.00 0.00 2.24
1929 2015 0.821517 CCATGCCTACGTCCACACTA 59.178 55.000 0.00 0.00 0.00 2.74
1930 2016 1.596934 CCATGCCTACGTCCACACT 59.403 57.895 0.00 0.00 0.00 3.55
1931 2017 1.449601 CCCATGCCTACGTCCACAC 60.450 63.158 0.00 0.00 0.00 3.82
1932 2018 1.916273 ACCCATGCCTACGTCCACA 60.916 57.895 0.00 0.00 0.00 4.17
1933 2019 1.449601 CACCCATGCCTACGTCCAC 60.450 63.158 0.00 0.00 0.00 4.02
1934 2020 2.665089 CCACCCATGCCTACGTCCA 61.665 63.158 0.00 0.00 0.00 4.02
1935 2021 2.189521 CCACCCATGCCTACGTCC 59.810 66.667 0.00 0.00 0.00 4.79
1936 2022 2.513897 GCCACCCATGCCTACGTC 60.514 66.667 0.00 0.00 0.00 4.34
1937 2023 4.109675 GGCCACCCATGCCTACGT 62.110 66.667 0.00 0.00 45.70 3.57
1943 2029 4.365111 TGGTCAGGCCACCCATGC 62.365 66.667 5.01 0.00 43.61 4.06
1944 2030 2.044650 CTGGTCAGGCCACCCATG 60.045 66.667 5.01 0.00 43.61 3.66
1945 2031 2.142292 GAACTGGTCAGGCCACCCAT 62.142 60.000 5.01 0.00 43.61 4.00
1946 2032 2.776526 AACTGGTCAGGCCACCCA 60.777 61.111 5.01 6.70 43.61 4.51
1947 2033 2.034221 GAACTGGTCAGGCCACCC 59.966 66.667 5.01 1.18 43.61 4.61
1948 2034 2.358737 CGAACTGGTCAGGCCACC 60.359 66.667 5.01 5.16 43.61 4.61
1949 2035 1.374758 CTCGAACTGGTCAGGCCAC 60.375 63.158 5.01 0.00 43.61 5.01
1950 2036 3.059982 CTCGAACTGGTCAGGCCA 58.940 61.111 5.01 0.00 46.95 5.36
1951 2037 2.435059 GCTCGAACTGGTCAGGCC 60.435 66.667 0.00 0.00 37.90 5.19
1952 2038 2.811317 CGCTCGAACTGGTCAGGC 60.811 66.667 2.87 0.00 0.00 4.85
1953 2039 2.125912 CCGCTCGAACTGGTCAGG 60.126 66.667 2.87 0.00 0.00 3.86
1954 2040 2.125912 CCCGCTCGAACTGGTCAG 60.126 66.667 0.00 0.00 0.00 3.51
1955 2041 4.373116 GCCCGCTCGAACTGGTCA 62.373 66.667 0.00 0.00 0.00 4.02
1956 2042 3.591254 AAGCCCGCTCGAACTGGTC 62.591 63.158 0.00 0.00 0.00 4.02
1957 2043 3.178540 AAAGCCCGCTCGAACTGGT 62.179 57.895 0.00 0.00 0.00 4.00
1958 2044 2.358737 AAAGCCCGCTCGAACTGG 60.359 61.111 0.00 0.00 0.00 4.00
1959 2045 2.680913 CCAAAGCCCGCTCGAACTG 61.681 63.158 0.00 0.00 0.00 3.16
1960 2046 2.358737 CCAAAGCCCGCTCGAACT 60.359 61.111 0.00 0.00 0.00 3.01
1961 2047 4.103103 GCCAAAGCCCGCTCGAAC 62.103 66.667 0.00 0.00 0.00 3.95
1962 2048 4.329545 AGCCAAAGCCCGCTCGAA 62.330 61.111 0.00 0.00 41.25 3.71
1963 2049 4.760047 GAGCCAAAGCCCGCTCGA 62.760 66.667 0.00 0.00 41.90 4.04
1969 2055 1.754380 AAAAACCGGAGCCAAAGCCC 61.754 55.000 9.46 0.00 41.25 5.19
1970 2056 0.319555 GAAAAACCGGAGCCAAAGCC 60.320 55.000 9.46 0.00 41.25 4.35
1971 2057 0.663269 CGAAAAACCGGAGCCAAAGC 60.663 55.000 9.46 0.00 40.32 3.51
1972 2058 3.472263 CGAAAAACCGGAGCCAAAG 57.528 52.632 9.46 0.00 0.00 2.77
1982 2068 0.883370 AGACTCACGGCCGAAAAACC 60.883 55.000 35.90 15.62 0.00 3.27
1983 2069 0.234884 CAGACTCACGGCCGAAAAAC 59.765 55.000 35.90 19.15 0.00 2.43
1984 2070 0.882927 CCAGACTCACGGCCGAAAAA 60.883 55.000 35.90 12.72 0.00 1.94
1985 2071 1.301401 CCAGACTCACGGCCGAAAA 60.301 57.895 35.90 15.47 0.00 2.29
1986 2072 2.342279 CCAGACTCACGGCCGAAA 59.658 61.111 35.90 18.27 0.00 3.46
1987 2073 3.691342 CCCAGACTCACGGCCGAA 61.691 66.667 35.90 18.67 0.00 4.30
1992 2078 2.725203 TTTTCGGCCCAGACTCACGG 62.725 60.000 0.00 0.00 0.00 4.94
1993 2079 1.301401 TTTTCGGCCCAGACTCACG 60.301 57.895 0.00 0.00 0.00 4.35
1994 2080 1.235281 GGTTTTCGGCCCAGACTCAC 61.235 60.000 0.00 0.00 0.00 3.51
1995 2081 1.072505 GGTTTTCGGCCCAGACTCA 59.927 57.895 0.00 0.00 0.00 3.41
1996 2082 0.611714 TAGGTTTTCGGCCCAGACTC 59.388 55.000 0.00 0.00 0.00 3.36
1997 2083 1.061546 TTAGGTTTTCGGCCCAGACT 58.938 50.000 0.00 0.00 0.00 3.24
1998 2084 1.900245 TTTAGGTTTTCGGCCCAGAC 58.100 50.000 0.00 0.00 0.00 3.51
1999 2085 2.891191 ATTTAGGTTTTCGGCCCAGA 57.109 45.000 0.00 0.00 0.00 3.86
2000 2086 3.617284 AGTATTTAGGTTTTCGGCCCAG 58.383 45.455 0.00 0.00 0.00 4.45
2001 2087 3.724732 AGTATTTAGGTTTTCGGCCCA 57.275 42.857 0.00 0.00 0.00 5.36
2002 2088 6.513806 TTTAAGTATTTAGGTTTTCGGCCC 57.486 37.500 0.00 0.00 0.00 5.80
2003 2089 7.369607 TGTTTTAAGTATTTAGGTTTTCGGCC 58.630 34.615 0.00 0.00 0.00 6.13
2004 2090 8.975410 ATGTTTTAAGTATTTAGGTTTTCGGC 57.025 30.769 0.00 0.00 0.00 5.54
2026 2112 8.506437 CGCATATATTTTCACCAAGTCATATGT 58.494 33.333 1.90 0.00 31.05 2.29
2027 2113 8.506437 ACGCATATATTTTCACCAAGTCATATG 58.494 33.333 0.00 0.00 0.00 1.78
2028 2114 8.621532 ACGCATATATTTTCACCAAGTCATAT 57.378 30.769 0.00 0.00 0.00 1.78
2029 2115 8.341903 CAACGCATATATTTTCACCAAGTCATA 58.658 33.333 0.00 0.00 0.00 2.15
2030 2116 6.942532 ACGCATATATTTTCACCAAGTCAT 57.057 33.333 0.00 0.00 0.00 3.06
2031 2117 6.550843 CAACGCATATATTTTCACCAAGTCA 58.449 36.000 0.00 0.00 0.00 3.41
2032 2118 5.455525 GCAACGCATATATTTTCACCAAGTC 59.544 40.000 0.00 0.00 0.00 3.01
2033 2119 5.125417 AGCAACGCATATATTTTCACCAAGT 59.875 36.000 0.00 0.00 0.00 3.16
2034 2120 5.581605 AGCAACGCATATATTTTCACCAAG 58.418 37.500 0.00 0.00 0.00 3.61
2035 2121 5.449862 GGAGCAACGCATATATTTTCACCAA 60.450 40.000 0.00 0.00 0.00 3.67
2036 2122 4.036262 GGAGCAACGCATATATTTTCACCA 59.964 41.667 0.00 0.00 0.00 4.17
2037 2123 4.537015 GGAGCAACGCATATATTTTCACC 58.463 43.478 0.00 0.00 0.00 4.02
2038 2124 4.275936 AGGGAGCAACGCATATATTTTCAC 59.724 41.667 0.00 0.00 0.00 3.18
2039 2125 4.460263 AGGGAGCAACGCATATATTTTCA 58.540 39.130 0.00 0.00 0.00 2.69
2040 2126 4.083271 GGAGGGAGCAACGCATATATTTTC 60.083 45.833 0.00 0.00 0.00 2.29
2041 2127 3.821033 GGAGGGAGCAACGCATATATTTT 59.179 43.478 0.00 0.00 0.00 1.82
2042 2128 3.181445 TGGAGGGAGCAACGCATATATTT 60.181 43.478 0.00 0.00 0.00 1.40
2043 2129 2.371841 TGGAGGGAGCAACGCATATATT 59.628 45.455 0.00 0.00 0.00 1.28
2044 2130 1.977854 TGGAGGGAGCAACGCATATAT 59.022 47.619 0.00 0.00 0.00 0.86
2045 2131 1.419381 TGGAGGGAGCAACGCATATA 58.581 50.000 0.00 0.00 0.00 0.86
2046 2132 0.767375 ATGGAGGGAGCAACGCATAT 59.233 50.000 0.00 0.00 0.00 1.78
2047 2133 0.106708 GATGGAGGGAGCAACGCATA 59.893 55.000 0.00 0.00 0.00 3.14
2048 2134 1.153086 GATGGAGGGAGCAACGCAT 60.153 57.895 0.00 0.00 0.00 4.73
2049 2135 2.244117 GAGATGGAGGGAGCAACGCA 62.244 60.000 0.00 0.00 0.00 5.24
2050 2136 1.522580 GAGATGGAGGGAGCAACGC 60.523 63.158 0.00 0.00 0.00 4.84
2051 2137 0.250234 TTGAGATGGAGGGAGCAACG 59.750 55.000 0.00 0.00 0.00 4.10
2052 2138 2.496899 TTTGAGATGGAGGGAGCAAC 57.503 50.000 0.00 0.00 0.00 4.17
2053 2139 3.744940 ATTTTGAGATGGAGGGAGCAA 57.255 42.857 0.00 0.00 0.00 3.91
2054 2140 4.228210 ACTTATTTTGAGATGGAGGGAGCA 59.772 41.667 0.00 0.00 0.00 4.26
2055 2141 4.578105 CACTTATTTTGAGATGGAGGGAGC 59.422 45.833 0.00 0.00 0.00 4.70
2056 2142 4.578105 GCACTTATTTTGAGATGGAGGGAG 59.422 45.833 0.00 0.00 0.00 4.30
2057 2143 4.526970 GCACTTATTTTGAGATGGAGGGA 58.473 43.478 0.00 0.00 0.00 4.20
2058 2144 3.633986 GGCACTTATTTTGAGATGGAGGG 59.366 47.826 0.00 0.00 0.00 4.30
2059 2145 4.096984 GTGGCACTTATTTTGAGATGGAGG 59.903 45.833 11.13 0.00 0.00 4.30
2060 2146 4.946157 AGTGGCACTTATTTTGAGATGGAG 59.054 41.667 15.88 0.00 0.00 3.86
2061 2147 4.922206 AGTGGCACTTATTTTGAGATGGA 58.078 39.130 15.88 0.00 0.00 3.41
2062 2148 6.757897 TTAGTGGCACTTATTTTGAGATGG 57.242 37.500 27.24 0.00 0.00 3.51
2063 2149 9.643693 ATTTTTAGTGGCACTTATTTTGAGATG 57.356 29.630 27.24 0.00 0.00 2.90
2117 2203 8.512138 CGTTATAGGTGTTTCTCAAAAAGGAAT 58.488 33.333 0.00 0.00 0.00 3.01
2118 2204 7.499895 ACGTTATAGGTGTTTCTCAAAAAGGAA 59.500 33.333 0.00 0.00 0.00 3.36
2119 2205 6.993902 ACGTTATAGGTGTTTCTCAAAAAGGA 59.006 34.615 0.00 0.00 0.00 3.36
2120 2206 7.041644 TGACGTTATAGGTGTTTCTCAAAAAGG 60.042 37.037 0.00 0.00 0.00 3.11
2121 2207 7.857569 TGACGTTATAGGTGTTTCTCAAAAAG 58.142 34.615 0.00 0.00 0.00 2.27
2122 2208 7.789273 TGACGTTATAGGTGTTTCTCAAAAA 57.211 32.000 0.00 0.00 0.00 1.94
2123 2209 7.972832 ATGACGTTATAGGTGTTTCTCAAAA 57.027 32.000 0.00 0.00 0.00 2.44
2124 2210 7.658167 TGAATGACGTTATAGGTGTTTCTCAAA 59.342 33.333 0.00 0.00 0.00 2.69
2125 2211 7.156000 TGAATGACGTTATAGGTGTTTCTCAA 58.844 34.615 0.00 0.00 0.00 3.02
2126 2212 6.693466 TGAATGACGTTATAGGTGTTTCTCA 58.307 36.000 0.00 0.00 0.00 3.27
2127 2213 7.772332 ATGAATGACGTTATAGGTGTTTCTC 57.228 36.000 0.00 0.00 0.00 2.87
2128 2214 8.475639 AGTATGAATGACGTTATAGGTGTTTCT 58.524 33.333 0.00 0.00 0.00 2.52
2129 2215 8.644318 AGTATGAATGACGTTATAGGTGTTTC 57.356 34.615 0.00 0.00 0.00 2.78
2130 2216 8.255206 TGAGTATGAATGACGTTATAGGTGTTT 58.745 33.333 0.00 0.00 0.00 2.83
2131 2217 7.778083 TGAGTATGAATGACGTTATAGGTGTT 58.222 34.615 0.00 0.00 0.00 3.32
2132 2218 7.342769 TGAGTATGAATGACGTTATAGGTGT 57.657 36.000 0.00 0.00 0.00 4.16
2133 2219 9.561270 CTATGAGTATGAATGACGTTATAGGTG 57.439 37.037 0.00 0.00 0.00 4.00
2134 2220 9.298250 ACTATGAGTATGAATGACGTTATAGGT 57.702 33.333 0.00 0.00 0.00 3.08
2135 2221 9.561270 CACTATGAGTATGAATGACGTTATAGG 57.439 37.037 0.00 0.00 0.00 2.57
2136 2222 9.561270 CCACTATGAGTATGAATGACGTTATAG 57.439 37.037 0.00 0.00 0.00 1.31
2137 2223 8.027189 GCCACTATGAGTATGAATGACGTTATA 58.973 37.037 0.00 0.00 0.00 0.98
2138 2224 6.868864 GCCACTATGAGTATGAATGACGTTAT 59.131 38.462 0.00 0.00 0.00 1.89
2139 2225 6.213677 GCCACTATGAGTATGAATGACGTTA 58.786 40.000 0.00 0.00 0.00 3.18
2140 2226 5.050490 GCCACTATGAGTATGAATGACGTT 58.950 41.667 0.00 0.00 0.00 3.99
2141 2227 4.621991 GCCACTATGAGTATGAATGACGT 58.378 43.478 0.00 0.00 0.00 4.34
2142 2228 3.670523 CGCCACTATGAGTATGAATGACG 59.329 47.826 0.00 0.00 0.00 4.35
2143 2229 3.990469 CCGCCACTATGAGTATGAATGAC 59.010 47.826 0.00 0.00 0.00 3.06
2144 2230 3.895041 TCCGCCACTATGAGTATGAATGA 59.105 43.478 0.00 0.00 0.00 2.57
2145 2231 4.021981 TCTCCGCCACTATGAGTATGAATG 60.022 45.833 0.00 0.00 0.00 2.67
2146 2232 4.021894 GTCTCCGCCACTATGAGTATGAAT 60.022 45.833 0.00 0.00 0.00 2.57
2147 2233 3.318275 GTCTCCGCCACTATGAGTATGAA 59.682 47.826 0.00 0.00 0.00 2.57
2148 2234 2.885266 GTCTCCGCCACTATGAGTATGA 59.115 50.000 0.00 0.00 0.00 2.15
2149 2235 2.623416 TGTCTCCGCCACTATGAGTATG 59.377 50.000 0.00 0.00 0.00 2.39
2150 2236 2.887783 CTGTCTCCGCCACTATGAGTAT 59.112 50.000 0.00 0.00 0.00 2.12
2151 2237 2.298610 CTGTCTCCGCCACTATGAGTA 58.701 52.381 0.00 0.00 0.00 2.59
2152 2238 1.107114 CTGTCTCCGCCACTATGAGT 58.893 55.000 0.00 0.00 0.00 3.41
2153 2239 0.387202 CCTGTCTCCGCCACTATGAG 59.613 60.000 0.00 0.00 0.00 2.90
2154 2240 1.043116 CCCTGTCTCCGCCACTATGA 61.043 60.000 0.00 0.00 0.00 2.15
2155 2241 1.443407 CCCTGTCTCCGCCACTATG 59.557 63.158 0.00 0.00 0.00 2.23
2156 2242 1.762460 CCCCTGTCTCCGCCACTAT 60.762 63.158 0.00 0.00 0.00 2.12
2157 2243 2.363795 CCCCTGTCTCCGCCACTA 60.364 66.667 0.00 0.00 0.00 2.74
2163 2249 3.077556 CTGGTCCCCCTGTCTCCG 61.078 72.222 0.00 0.00 0.00 4.63
2164 2250 3.403558 GCTGGTCCCCCTGTCTCC 61.404 72.222 0.00 0.00 32.49 3.71
2165 2251 2.607750 TGCTGGTCCCCCTGTCTC 60.608 66.667 0.00 0.00 32.49 3.36
2166 2252 2.608988 CTGCTGGTCCCCCTGTCT 60.609 66.667 0.00 0.00 32.49 3.41
2167 2253 3.721706 CCTGCTGGTCCCCCTGTC 61.722 72.222 0.51 0.00 32.49 3.51
2175 2261 3.483869 CTAGGGCCCCTGCTGGTC 61.484 72.222 21.43 0.00 37.74 4.02
2195 2281 5.388599 AGTAAATCCTTGATGTTAGGGGG 57.611 43.478 0.00 0.00 33.41 5.40
2196 2282 7.138054 AGTAGTAAATCCTTGATGTTAGGGG 57.862 40.000 0.00 0.00 33.41 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.