Multiple sequence alignment - TraesCS5B01G336600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G336600 chr5B 100.000 3470 0 0 1 3470 520035726 520039195 0.000000e+00 6408.0
1 TraesCS5B01G336600 chr5B 90.709 2454 159 28 3 2402 520045400 520047838 0.000000e+00 3205.0
2 TraesCS5B01G336600 chr5B 93.075 1574 85 11 989 2556 519660967 519662522 0.000000e+00 2281.0
3 TraesCS5B01G336600 chr5B 89.983 579 50 6 2349 2920 519895340 519895917 0.000000e+00 741.0
4 TraesCS5B01G336600 chr5B 76.500 200 39 5 3008 3201 515670603 515670406 6.130000e-18 102.0
5 TraesCS5B01G336600 chr5B 96.078 51 2 0 867 917 519660817 519660867 2.220000e-12 84.2
6 TraesCS5B01G336600 chr5A 87.490 2494 195 52 402 2792 546145462 546147941 0.000000e+00 2769.0
7 TraesCS5B01G336600 chr5A 90.820 1928 134 24 990 2903 545984536 545986434 0.000000e+00 2540.0
8 TraesCS5B01G336600 chr5A 93.388 1331 85 1 1072 2402 546154205 546155532 0.000000e+00 1967.0
9 TraesCS5B01G336600 chr5A 90.574 1464 128 6 1080 2540 545870668 545872124 0.000000e+00 1930.0
10 TraesCS5B01G336600 chr5A 82.920 1007 106 33 3 970 546153100 546154079 0.000000e+00 846.0
11 TraesCS5B01G336600 chr5A 90.625 96 7 2 2911 3006 545988300 545988393 3.640000e-25 126.0
12 TraesCS5B01G336600 chr5A 97.436 39 1 0 867 905 545984486 545984524 2.240000e-07 67.6
13 TraesCS5B01G336600 chr5A 91.304 46 4 0 975 1020 546154117 546154162 2.890000e-06 63.9
14 TraesCS5B01G336600 chr5D 89.176 2014 152 46 867 2838 430445334 430447323 0.000000e+00 2451.0
15 TraesCS5B01G336600 chr5D 89.452 1953 148 25 492 2402 430511027 430512963 0.000000e+00 2412.0
16 TraesCS5B01G336600 chr5D 89.920 1498 137 7 1080 2570 430164059 430165549 0.000000e+00 1917.0
17 TraesCS5B01G336600 chr2D 79.426 418 77 8 189 601 117395377 117394964 1.580000e-73 287.0
18 TraesCS5B01G336600 chr2D 77.143 420 79 14 188 601 480128717 480129125 9.690000e-56 228.0
19 TraesCS5B01G336600 chr2D 83.333 168 25 1 9 173 17429292 17429459 6.000000e-33 152.0
20 TraesCS5B01G336600 chr2A 79.599 299 51 9 190 482 622303673 622303967 4.540000e-49 206.0
21 TraesCS5B01G336600 chr2A 78.671 286 49 10 191 470 686636165 686636444 2.750000e-41 180.0
22 TraesCS5B01G336600 chr1D 85.714 168 21 1 9 173 208754923 208754756 1.280000e-39 174.0
23 TraesCS5B01G336600 chr1D 82.353 153 24 2 23 172 103422231 103422079 2.810000e-26 130.0
24 TraesCS5B01G336600 chr2B 85.294 170 22 1 9 175 29862791 29862622 4.600000e-39 172.0
25 TraesCS5B01G336600 chr1A 88.889 81 9 0 2 82 545653950 545654030 2.200000e-17 100.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G336600 chr5B 520035726 520039195 3469 False 6408.000000 6408 100.000000 1 3470 1 chr5B.!!$F2 3469
1 TraesCS5B01G336600 chr5B 520045400 520047838 2438 False 3205.000000 3205 90.709000 3 2402 1 chr5B.!!$F3 2399
2 TraesCS5B01G336600 chr5B 519660817 519662522 1705 False 1182.600000 2281 94.576500 867 2556 2 chr5B.!!$F4 1689
3 TraesCS5B01G336600 chr5B 519895340 519895917 577 False 741.000000 741 89.983000 2349 2920 1 chr5B.!!$F1 571
4 TraesCS5B01G336600 chr5A 546145462 546147941 2479 False 2769.000000 2769 87.490000 402 2792 1 chr5A.!!$F2 2390
5 TraesCS5B01G336600 chr5A 545870668 545872124 1456 False 1930.000000 1930 90.574000 1080 2540 1 chr5A.!!$F1 1460
6 TraesCS5B01G336600 chr5A 546153100 546155532 2432 False 958.966667 1967 89.204000 3 2402 3 chr5A.!!$F4 2399
7 TraesCS5B01G336600 chr5A 545984486 545988393 3907 False 911.200000 2540 92.960333 867 3006 3 chr5A.!!$F3 2139
8 TraesCS5B01G336600 chr5D 430445334 430447323 1989 False 2451.000000 2451 89.176000 867 2838 1 chr5D.!!$F2 1971
9 TraesCS5B01G336600 chr5D 430511027 430512963 1936 False 2412.000000 2412 89.452000 492 2402 1 chr5D.!!$F3 1910
10 TraesCS5B01G336600 chr5D 430164059 430165549 1490 False 1917.000000 1917 89.920000 1080 2570 1 chr5D.!!$F1 1490

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
919 990 0.669077 AGCGTGTTCGAGACTTCACT 59.331 50.0 0.0 0.0 39.71 3.41 F
920 991 0.778815 GCGTGTTCGAGACTTCACTG 59.221 55.0 0.0 0.0 39.71 3.66 F
1790 1950 0.976641 TCACCAAGGACTTCATCGCT 59.023 50.0 0.0 0.0 0.00 4.93 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2412 2577 0.322008 GCCTCACTCCCTGTTCCTTG 60.322 60.000 0.00 0.0 0.0 3.61 R
2416 2581 1.555075 TGTATGCCTCACTCCCTGTTC 59.445 52.381 0.00 0.0 0.0 3.18 R
3217 5284 0.032678 AGTGGATCGCGCTAGAATGG 59.967 55.000 5.56 0.0 0.0 3.16 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 2.184322 GCATCTTCGCGTCCTCCA 59.816 61.111 5.77 0.00 0.00 3.86
146 147 2.013400 GCTTAAGCTTCTTCTCTGCCC 58.987 52.381 20.38 0.00 38.21 5.36
157 158 1.600058 TCTCTGCCCCCTTCATCAAT 58.400 50.000 0.00 0.00 0.00 2.57
160 161 3.527253 TCTCTGCCCCCTTCATCAATAAA 59.473 43.478 0.00 0.00 0.00 1.40
225 226 2.028112 TCATCCACAACTTCCTTCTCCG 60.028 50.000 0.00 0.00 0.00 4.63
251 252 1.222936 CTCCTCCAGGTCCATGTGC 59.777 63.158 0.00 0.00 36.34 4.57
290 291 2.418669 AGAGAGTGGGGAAAAAGGACA 58.581 47.619 0.00 0.00 0.00 4.02
322 326 1.227674 GAGCGCGGGATGGAAGAAT 60.228 57.895 8.83 0.00 0.00 2.40
405 409 1.770294 TTTTTGTTCAGCGAGGGGTT 58.230 45.000 0.00 0.00 0.00 4.11
438 442 3.063084 GCTCGTGTCCGGACTCCT 61.063 66.667 33.39 0.00 33.95 3.69
450 458 0.696501 GGACTCCTGTAAAGCCCCAA 59.303 55.000 0.00 0.00 0.00 4.12
485 495 7.778470 TTGTTTTGACTGCGGAAAATTTATT 57.222 28.000 0.00 0.00 0.00 1.40
497 507 6.746745 GGAAAATTTATTGTCCGGACTACA 57.253 37.500 33.39 15.09 34.66 2.74
573 583 1.202382 CCAGACGGATAAGGACGGTTC 60.202 57.143 0.00 0.00 0.00 3.62
614 642 4.523083 TGCCCTAACTCAAACATCCATAC 58.477 43.478 0.00 0.00 0.00 2.39
647 677 5.233050 CAGCTAGTATTTTCTCGTGGACATG 59.767 44.000 0.00 0.00 0.00 3.21
752 785 1.067071 GGAGTGAAACAGAGGTACGGG 60.067 57.143 0.00 0.00 41.43 5.28
792 848 3.189080 GCACTAGTCAAACACATGCATGA 59.811 43.478 32.75 7.59 33.14 3.07
915 986 1.729838 GCGAGCGTGTTCGAGACTT 60.730 57.895 10.34 0.00 43.03 3.01
918 989 1.053811 GAGCGTGTTCGAGACTTCAC 58.946 55.000 0.00 0.00 39.71 3.18
919 990 0.669077 AGCGTGTTCGAGACTTCACT 59.331 50.000 0.00 0.00 39.71 3.41
920 991 0.778815 GCGTGTTCGAGACTTCACTG 59.221 55.000 0.00 0.00 39.71 3.66
921 992 1.409412 CGTGTTCGAGACTTCACTGG 58.591 55.000 0.00 0.00 39.71 4.00
944 1015 8.169977 TGGTACCGTCCTATAAATAGTACAAG 57.830 38.462 7.57 0.00 0.00 3.16
975 1050 5.183713 CAGGACAAGCACCAAATCATAGAAA 59.816 40.000 0.00 0.00 0.00 2.52
976 1051 5.416952 AGGACAAGCACCAAATCATAGAAAG 59.583 40.000 0.00 0.00 0.00 2.62
977 1052 5.415701 GGACAAGCACCAAATCATAGAAAGA 59.584 40.000 0.00 0.00 0.00 2.52
1289 1449 2.043248 ACGGTCCTCGCCCAGTAT 60.043 61.111 0.00 0.00 43.89 2.12
1526 1686 1.448013 GCTCGCTGTAGGGTTCACC 60.448 63.158 0.00 0.00 40.67 4.02
1790 1950 0.976641 TCACCAAGGACTTCATCGCT 59.023 50.000 0.00 0.00 0.00 4.93
2060 2220 1.153823 CCAGGTGATCCACGACGAC 60.154 63.158 0.00 0.00 34.83 4.34
2107 2267 3.064207 TCCAATCTTTTGTCGACTTCGG 58.936 45.455 17.92 6.11 40.29 4.30
2412 2577 3.056821 GGTGGCCAAACTTGAATTAGTCC 60.057 47.826 7.24 0.00 0.00 3.85
2416 2581 4.321974 GGCCAAACTTGAATTAGTCCAAGG 60.322 45.833 0.00 0.00 42.86 3.61
2544 2725 6.649436 CACAGATGTTGTTGTGTACAGTTAG 58.351 40.000 0.00 0.00 39.77 2.34
2570 2751 6.683090 CGAATTTTCGGAGCAAACAAATTA 57.317 33.333 4.81 0.00 46.30 1.40
2626 2808 4.988540 TGTTTGATCCGACTTGAACACTAG 59.011 41.667 0.00 0.00 0.00 2.57
2754 2943 6.347725 GGGCTCTATTGCGTATGTTTTATCAG 60.348 42.308 0.00 0.00 0.00 2.90
2792 2989 5.351948 ACATGCAAGGGTTTTACAAAAGT 57.648 34.783 0.00 0.00 0.00 2.66
2798 2995 6.183360 TGCAAGGGTTTTACAAAAGTACGAAT 60.183 34.615 0.00 0.00 0.00 3.34
2879 3090 1.089481 AATACACCATGGCAGCGTCG 61.089 55.000 13.04 0.00 0.00 5.12
2905 3116 2.912956 AGATCCTGGTTGAACTAAGCCA 59.087 45.455 0.00 0.00 35.94 4.75
2908 3119 4.112634 TCCTGGTTGAACTAAGCCAAAT 57.887 40.909 0.00 0.00 35.94 2.32
2909 3120 4.079253 TCCTGGTTGAACTAAGCCAAATC 58.921 43.478 0.00 0.00 35.94 2.17
2912 3123 5.335976 CCTGGTTGAACTAAGCCAAATCTTC 60.336 44.000 0.00 0.00 35.94 2.87
2916 3127 6.016276 GGTTGAACTAAGCCAAATCTTCAAGA 60.016 38.462 0.00 0.00 30.37 3.02
2955 5022 4.003648 GAGTTGGTCCATACCTCAAACTG 58.996 47.826 0.00 0.00 46.91 3.16
2957 5024 4.289672 AGTTGGTCCATACCTCAAACTGAT 59.710 41.667 0.00 0.00 46.91 2.90
2962 5029 5.817816 GGTCCATACCTCAAACTGATTGTAG 59.182 44.000 0.00 0.00 43.08 2.74
2983 5050 5.506686 AGTCTTTCTTTTTGGCTCTGAAC 57.493 39.130 0.00 0.00 0.00 3.18
2985 5052 3.945285 TCTTTCTTTTTGGCTCTGAACGT 59.055 39.130 0.00 0.00 0.00 3.99
3006 5073 5.927115 ACGTGAGTCATTTTAGTTCTTCCTC 59.073 40.000 0.00 0.00 44.19 3.71
3007 5074 5.926542 CGTGAGTCATTTTAGTTCTTCCTCA 59.073 40.000 0.00 0.00 0.00 3.86
3008 5075 6.423905 CGTGAGTCATTTTAGTTCTTCCTCAA 59.576 38.462 0.00 0.00 0.00 3.02
3009 5076 7.359598 CGTGAGTCATTTTAGTTCTTCCTCAAG 60.360 40.741 0.00 0.00 0.00 3.02
3010 5077 6.936900 TGAGTCATTTTAGTTCTTCCTCAAGG 59.063 38.462 0.00 0.00 0.00 3.61
3011 5078 7.079451 AGTCATTTTAGTTCTTCCTCAAGGA 57.921 36.000 0.00 0.00 43.73 3.36
3012 5079 6.937465 AGTCATTTTAGTTCTTCCTCAAGGAC 59.063 38.462 0.00 0.00 45.39 3.85
3013 5080 6.710744 GTCATTTTAGTTCTTCCTCAAGGACA 59.289 38.462 0.00 0.00 45.39 4.02
3014 5081 7.391833 GTCATTTTAGTTCTTCCTCAAGGACAT 59.608 37.037 0.00 0.00 45.39 3.06
3015 5082 7.944554 TCATTTTAGTTCTTCCTCAAGGACATT 59.055 33.333 0.00 0.00 45.39 2.71
3016 5083 9.231297 CATTTTAGTTCTTCCTCAAGGACATTA 57.769 33.333 0.00 0.00 45.39 1.90
3017 5084 9.981460 ATTTTAGTTCTTCCTCAAGGACATTAT 57.019 29.630 0.00 0.00 45.39 1.28
3020 5087 9.886132 TTAGTTCTTCCTCAAGGACATTATAAC 57.114 33.333 0.00 0.00 45.39 1.89
3021 5088 7.339482 AGTTCTTCCTCAAGGACATTATAACC 58.661 38.462 0.00 0.00 45.39 2.85
3022 5089 5.914033 TCTTCCTCAAGGACATTATAACCG 58.086 41.667 0.00 0.00 45.39 4.44
3023 5090 4.067972 TCCTCAAGGACATTATAACCGC 57.932 45.455 0.00 0.00 39.78 5.68
3024 5091 3.452990 TCCTCAAGGACATTATAACCGCA 59.547 43.478 0.00 0.00 39.78 5.69
3025 5092 3.560068 CCTCAAGGACATTATAACCGCAC 59.440 47.826 0.00 0.00 37.39 5.34
3026 5093 3.537580 TCAAGGACATTATAACCGCACC 58.462 45.455 0.00 0.00 0.00 5.01
3027 5094 3.199071 TCAAGGACATTATAACCGCACCT 59.801 43.478 0.00 0.00 0.00 4.00
3028 5095 4.406326 TCAAGGACATTATAACCGCACCTA 59.594 41.667 0.00 0.00 0.00 3.08
3029 5096 5.104859 TCAAGGACATTATAACCGCACCTAA 60.105 40.000 0.00 0.00 0.00 2.69
3030 5097 5.562298 AGGACATTATAACCGCACCTAAT 57.438 39.130 0.00 0.00 0.00 1.73
3031 5098 5.548406 AGGACATTATAACCGCACCTAATC 58.452 41.667 0.00 0.00 0.00 1.75
3032 5099 4.694037 GGACATTATAACCGCACCTAATCC 59.306 45.833 0.00 0.00 0.00 3.01
3033 5100 5.512576 GGACATTATAACCGCACCTAATCCT 60.513 44.000 0.00 0.00 0.00 3.24
3034 5101 5.305585 ACATTATAACCGCACCTAATCCTG 58.694 41.667 0.00 0.00 0.00 3.86
3035 5102 5.163237 ACATTATAACCGCACCTAATCCTGT 60.163 40.000 0.00 0.00 0.00 4.00
3036 5103 2.973694 TAACCGCACCTAATCCTGTC 57.026 50.000 0.00 0.00 0.00 3.51
3037 5104 0.252197 AACCGCACCTAATCCTGTCC 59.748 55.000 0.00 0.00 0.00 4.02
3038 5105 0.617820 ACCGCACCTAATCCTGTCCT 60.618 55.000 0.00 0.00 0.00 3.85
3039 5106 0.541863 CCGCACCTAATCCTGTCCTT 59.458 55.000 0.00 0.00 0.00 3.36
3040 5107 1.760613 CCGCACCTAATCCTGTCCTTA 59.239 52.381 0.00 0.00 0.00 2.69
3041 5108 2.483188 CCGCACCTAATCCTGTCCTTAC 60.483 54.545 0.00 0.00 0.00 2.34
3042 5109 2.167693 CGCACCTAATCCTGTCCTTACA 59.832 50.000 0.00 0.00 0.00 2.41
3055 5122 6.824305 CTGTCCTTACAGTGATTTGGATTT 57.176 37.500 0.00 0.00 46.76 2.17
3056 5123 7.219484 CTGTCCTTACAGTGATTTGGATTTT 57.781 36.000 0.00 0.00 46.76 1.82
3057 5124 7.214467 TGTCCTTACAGTGATTTGGATTTTC 57.786 36.000 0.00 0.00 0.00 2.29
3058 5125 6.072728 TGTCCTTACAGTGATTTGGATTTTCG 60.073 38.462 0.00 0.00 0.00 3.46
3059 5126 5.414454 TCCTTACAGTGATTTGGATTTTCGG 59.586 40.000 0.00 0.00 0.00 4.30
3060 5127 3.575965 ACAGTGATTTGGATTTTCGGC 57.424 42.857 0.00 0.00 0.00 5.54
3061 5128 2.231235 ACAGTGATTTGGATTTTCGGCC 59.769 45.455 0.00 0.00 0.00 6.13
3062 5129 1.472480 AGTGATTTGGATTTTCGGCCG 59.528 47.619 22.12 22.12 0.00 6.13
3063 5130 1.201414 GTGATTTGGATTTTCGGCCGT 59.799 47.619 27.15 5.04 0.00 5.68
3064 5131 1.470890 TGATTTGGATTTTCGGCCGTC 59.529 47.619 27.15 15.37 0.00 4.79
3065 5132 0.815095 ATTTGGATTTTCGGCCGTCC 59.185 50.000 27.15 24.32 0.00 4.79
3086 5153 3.091653 GTTTTCACGATCTGAGCGTTC 57.908 47.619 19.17 3.76 40.44 3.95
3087 5154 2.432206 TTTCACGATCTGAGCGTTCA 57.568 45.000 19.17 5.47 40.44 3.18
3088 5155 2.654749 TTCACGATCTGAGCGTTCAT 57.345 45.000 19.17 0.00 40.44 2.57
3089 5156 1.913317 TCACGATCTGAGCGTTCATG 58.087 50.000 19.17 7.75 40.44 3.07
3090 5157 0.926155 CACGATCTGAGCGTTCATGG 59.074 55.000 19.17 3.17 40.44 3.66
3091 5158 0.532573 ACGATCTGAGCGTTCATGGT 59.467 50.000 15.94 0.00 39.18 3.55
3092 5159 1.203928 CGATCTGAGCGTTCATGGTC 58.796 55.000 7.22 2.47 36.91 4.02
3093 5160 1.203928 GATCTGAGCGTTCATGGTCG 58.796 55.000 1.26 0.00 39.19 4.79
3094 5161 0.532573 ATCTGAGCGTTCATGGTCGT 59.467 50.000 1.26 0.87 39.19 4.34
3095 5162 0.109272 TCTGAGCGTTCATGGTCGTC 60.109 55.000 1.26 8.29 39.19 4.20
3096 5163 0.388520 CTGAGCGTTCATGGTCGTCA 60.389 55.000 1.26 11.16 39.19 4.35
3097 5164 0.388520 TGAGCGTTCATGGTCGTCAG 60.389 55.000 0.00 0.00 39.19 3.51
3098 5165 0.109272 GAGCGTTCATGGTCGTCAGA 60.109 55.000 10.84 0.00 0.00 3.27
3099 5166 0.532573 AGCGTTCATGGTCGTCAGAT 59.467 50.000 10.84 0.00 0.00 2.90
3100 5167 0.924090 GCGTTCATGGTCGTCAGATC 59.076 55.000 10.84 0.00 0.00 2.75
3101 5168 1.469940 GCGTTCATGGTCGTCAGATCT 60.470 52.381 10.84 0.00 0.00 2.75
3102 5169 2.881074 CGTTCATGGTCGTCAGATCTT 58.119 47.619 0.00 0.00 0.00 2.40
3103 5170 2.600420 CGTTCATGGTCGTCAGATCTTG 59.400 50.000 0.00 0.00 34.89 3.02
3104 5171 3.589988 GTTCATGGTCGTCAGATCTTGT 58.410 45.455 0.00 0.00 35.07 3.16
3105 5172 3.236632 TCATGGTCGTCAGATCTTGTG 57.763 47.619 0.00 0.00 35.07 3.33
3106 5173 2.562738 TCATGGTCGTCAGATCTTGTGT 59.437 45.455 0.00 0.00 35.07 3.72
3107 5174 3.761752 TCATGGTCGTCAGATCTTGTGTA 59.238 43.478 0.00 0.00 35.07 2.90
3108 5175 4.219725 TCATGGTCGTCAGATCTTGTGTAA 59.780 41.667 0.00 0.00 35.07 2.41
3109 5176 4.594123 TGGTCGTCAGATCTTGTGTAAA 57.406 40.909 0.00 0.00 0.00 2.01
3110 5177 4.951254 TGGTCGTCAGATCTTGTGTAAAA 58.049 39.130 0.00 0.00 0.00 1.52
3111 5178 5.361427 TGGTCGTCAGATCTTGTGTAAAAA 58.639 37.500 0.00 0.00 0.00 1.94
3112 5179 5.235616 TGGTCGTCAGATCTTGTGTAAAAAC 59.764 40.000 0.00 0.00 0.00 2.43
3113 5180 5.235616 GGTCGTCAGATCTTGTGTAAAAACA 59.764 40.000 0.00 0.00 0.00 2.83
3114 5181 6.355638 GTCGTCAGATCTTGTGTAAAAACAG 58.644 40.000 0.00 0.00 0.00 3.16
3115 5182 6.018994 GTCGTCAGATCTTGTGTAAAAACAGT 60.019 38.462 0.00 0.00 0.00 3.55
3116 5183 6.537301 TCGTCAGATCTTGTGTAAAAACAGTT 59.463 34.615 0.00 0.00 0.00 3.16
3117 5184 7.065324 TCGTCAGATCTTGTGTAAAAACAGTTT 59.935 33.333 0.00 0.00 0.00 2.66
3118 5185 7.164171 CGTCAGATCTTGTGTAAAAACAGTTTG 59.836 37.037 0.00 0.00 0.00 2.93
3119 5186 7.968405 GTCAGATCTTGTGTAAAAACAGTTTGT 59.032 33.333 0.00 0.00 0.00 2.83
3120 5187 7.967854 TCAGATCTTGTGTAAAAACAGTTTGTG 59.032 33.333 0.00 0.00 0.00 3.33
3121 5188 6.751888 AGATCTTGTGTAAAAACAGTTTGTGC 59.248 34.615 0.00 0.00 0.00 4.57
3122 5189 5.164954 TCTTGTGTAAAAACAGTTTGTGCC 58.835 37.500 0.00 0.00 0.00 5.01
3123 5190 3.502920 TGTGTAAAAACAGTTTGTGCCG 58.497 40.909 0.00 0.00 0.00 5.69
3124 5191 3.057456 TGTGTAAAAACAGTTTGTGCCGT 60.057 39.130 0.00 0.00 0.00 5.68
3125 5192 3.544682 GTGTAAAAACAGTTTGTGCCGTC 59.455 43.478 0.00 0.00 0.00 4.79
3126 5193 3.190744 TGTAAAAACAGTTTGTGCCGTCA 59.809 39.130 0.00 0.00 0.00 4.35
3127 5194 2.271821 AAAACAGTTTGTGCCGTCAC 57.728 45.000 0.00 0.00 43.40 3.67
3128 5195 0.098025 AAACAGTTTGTGCCGTCACG 59.902 50.000 0.00 0.00 46.01 4.35
3129 5196 0.741574 AACAGTTTGTGCCGTCACGA 60.742 50.000 0.00 0.00 46.01 4.35
3130 5197 0.531974 ACAGTTTGTGCCGTCACGAT 60.532 50.000 0.00 0.00 46.01 3.73
3131 5198 0.586319 CAGTTTGTGCCGTCACGATT 59.414 50.000 0.00 0.00 46.01 3.34
3132 5199 1.002900 CAGTTTGTGCCGTCACGATTT 60.003 47.619 0.00 0.00 46.01 2.17
3133 5200 1.002900 AGTTTGTGCCGTCACGATTTG 60.003 47.619 0.00 0.00 46.01 2.32
3134 5201 0.309302 TTTGTGCCGTCACGATTTGG 59.691 50.000 0.00 0.00 46.01 3.28
3135 5202 1.511318 TTGTGCCGTCACGATTTGGG 61.511 55.000 0.00 0.00 46.01 4.12
3136 5203 1.964373 GTGCCGTCACGATTTGGGT 60.964 57.895 0.00 0.00 32.98 4.51
3137 5204 1.228003 TGCCGTCACGATTTGGGTT 60.228 52.632 0.00 0.00 0.00 4.11
3138 5205 0.820074 TGCCGTCACGATTTGGGTTT 60.820 50.000 0.00 0.00 0.00 3.27
3139 5206 0.312729 GCCGTCACGATTTGGGTTTT 59.687 50.000 0.00 0.00 0.00 2.43
3140 5207 1.664874 GCCGTCACGATTTGGGTTTTC 60.665 52.381 0.00 0.00 0.00 2.29
3141 5208 1.399215 CCGTCACGATTTGGGTTTTCG 60.399 52.381 0.00 0.00 38.76 3.46
3142 5209 1.399215 CGTCACGATTTGGGTTTTCGG 60.399 52.381 0.00 0.00 37.20 4.30
3143 5210 0.594110 TCACGATTTGGGTTTTCGGC 59.406 50.000 0.00 0.00 37.20 5.54
3144 5211 0.596082 CACGATTTGGGTTTTCGGCT 59.404 50.000 0.00 0.00 37.20 5.52
3145 5212 0.596082 ACGATTTGGGTTTTCGGCTG 59.404 50.000 0.00 0.00 37.20 4.85
3146 5213 0.596082 CGATTTGGGTTTTCGGCTGT 59.404 50.000 0.00 0.00 0.00 4.40
3147 5214 1.401018 CGATTTGGGTTTTCGGCTGTC 60.401 52.381 0.00 0.00 0.00 3.51
3148 5215 0.966179 ATTTGGGTTTTCGGCTGTCC 59.034 50.000 0.00 0.00 0.00 4.02
3149 5216 0.106419 TTTGGGTTTTCGGCTGTCCT 60.106 50.000 0.00 0.00 0.00 3.85
3150 5217 0.821711 TTGGGTTTTCGGCTGTCCTG 60.822 55.000 0.00 0.00 0.00 3.86
3151 5218 1.228154 GGGTTTTCGGCTGTCCTGT 60.228 57.895 0.00 0.00 0.00 4.00
3152 5219 1.515521 GGGTTTTCGGCTGTCCTGTG 61.516 60.000 0.00 0.00 0.00 3.66
3153 5220 1.515521 GGTTTTCGGCTGTCCTGTGG 61.516 60.000 0.00 0.00 0.00 4.17
3154 5221 1.228124 TTTTCGGCTGTCCTGTGGG 60.228 57.895 0.00 0.00 0.00 4.61
3155 5222 1.701031 TTTTCGGCTGTCCTGTGGGA 61.701 55.000 0.00 0.00 39.70 4.37
3156 5223 1.488705 TTTCGGCTGTCCTGTGGGAT 61.489 55.000 0.00 0.00 44.33 3.85
3157 5224 2.124983 CGGCTGTCCTGTGGGATG 60.125 66.667 0.00 0.00 44.33 3.51
3158 5225 2.439156 GGCTGTCCTGTGGGATGC 60.439 66.667 0.00 0.00 44.33 3.91
3159 5226 2.673523 GCTGTCCTGTGGGATGCT 59.326 61.111 0.00 0.00 44.33 3.79
3160 5227 1.748122 GCTGTCCTGTGGGATGCTG 60.748 63.158 0.00 0.00 44.33 4.41
3161 5228 1.748122 CTGTCCTGTGGGATGCTGC 60.748 63.158 0.00 0.00 44.33 5.25
3162 5229 2.194388 CTGTCCTGTGGGATGCTGCT 62.194 60.000 0.00 0.00 44.33 4.24
3163 5230 1.451028 GTCCTGTGGGATGCTGCTC 60.451 63.158 0.00 0.00 44.33 4.26
3164 5231 2.124403 CCTGTGGGATGCTGCTCC 60.124 66.667 0.00 5.42 33.58 4.70
3165 5232 2.672908 CTGTGGGATGCTGCTCCA 59.327 61.111 16.37 11.54 37.01 3.86
3166 5233 1.451567 CTGTGGGATGCTGCTCCAG 60.452 63.158 16.37 5.48 37.01 3.86
3167 5234 1.907222 CTGTGGGATGCTGCTCCAGA 61.907 60.000 16.37 11.63 37.01 3.86
3168 5235 1.153208 GTGGGATGCTGCTCCAGAG 60.153 63.158 16.37 0.00 37.01 3.35
3169 5236 2.372890 TGGGATGCTGCTCCAGAGG 61.373 63.158 16.37 0.00 37.01 3.69
3170 5237 2.203181 GGATGCTGCTCCAGAGGC 60.203 66.667 11.62 0.00 35.24 4.70
3171 5238 2.203181 GATGCTGCTCCAGAGGCC 60.203 66.667 0.00 0.00 32.44 5.19
3172 5239 4.172512 ATGCTGCTCCAGAGGCCG 62.173 66.667 0.00 0.00 32.44 6.13
3174 5241 4.087892 GCTGCTCCAGAGGCCGAA 62.088 66.667 0.00 0.00 32.44 4.30
3175 5242 2.665000 CTGCTCCAGAGGCCGAAA 59.335 61.111 0.00 0.00 32.44 3.46
3176 5243 1.743252 CTGCTCCAGAGGCCGAAAC 60.743 63.158 0.00 0.00 32.44 2.78
3177 5244 2.347490 GCTCCAGAGGCCGAAACA 59.653 61.111 0.00 0.00 0.00 2.83
3178 5245 1.302511 GCTCCAGAGGCCGAAACAA 60.303 57.895 0.00 0.00 0.00 2.83
3179 5246 0.889186 GCTCCAGAGGCCGAAACAAA 60.889 55.000 0.00 0.00 0.00 2.83
3180 5247 1.160137 CTCCAGAGGCCGAAACAAAG 58.840 55.000 0.00 0.00 0.00 2.77
3181 5248 0.250727 TCCAGAGGCCGAAACAAAGG 60.251 55.000 0.00 0.00 0.00 3.11
3182 5249 0.250727 CCAGAGGCCGAAACAAAGGA 60.251 55.000 0.00 0.00 0.00 3.36
3183 5250 0.875059 CAGAGGCCGAAACAAAGGAC 59.125 55.000 0.00 0.00 35.21 3.85
3185 5252 3.324207 AGGCCGAAACAAAGGACTC 57.676 52.632 0.00 0.00 43.90 3.36
3186 5253 0.765510 AGGCCGAAACAAAGGACTCT 59.234 50.000 0.00 0.00 43.90 3.24
3187 5254 0.875059 GGCCGAAACAAAGGACTCTG 59.125 55.000 0.00 0.00 31.31 3.35
3188 5255 0.875059 GCCGAAACAAAGGACTCTGG 59.125 55.000 0.00 0.00 0.00 3.86
3189 5256 1.814248 GCCGAAACAAAGGACTCTGGT 60.814 52.381 0.00 0.00 0.00 4.00
3190 5257 1.873591 CCGAAACAAAGGACTCTGGTG 59.126 52.381 0.00 0.00 0.00 4.17
3191 5258 1.264288 CGAAACAAAGGACTCTGGTGC 59.736 52.381 0.00 0.00 0.00 5.01
3192 5259 2.297701 GAAACAAAGGACTCTGGTGCA 58.702 47.619 0.00 0.00 36.20 4.57
3193 5260 1.680338 AACAAAGGACTCTGGTGCAC 58.320 50.000 8.80 8.80 36.20 4.57
3194 5261 0.839946 ACAAAGGACTCTGGTGCACT 59.160 50.000 17.98 0.00 36.20 4.40
3195 5262 1.233019 CAAAGGACTCTGGTGCACTG 58.767 55.000 17.98 10.30 36.20 3.66
3196 5263 0.109342 AAAGGACTCTGGTGCACTGG 59.891 55.000 17.98 9.89 36.20 4.00
3197 5264 1.772819 AAGGACTCTGGTGCACTGGG 61.773 60.000 17.98 12.45 36.20 4.45
3198 5265 2.359230 GACTCTGGTGCACTGGGC 60.359 66.667 17.98 0.00 45.13 5.36
3199 5266 3.909086 GACTCTGGTGCACTGGGCC 62.909 68.421 17.98 0.00 43.89 5.80
3222 5289 3.145551 CCAGCTGCCAGCCCATTC 61.146 66.667 14.25 0.00 43.77 2.67
3223 5290 2.044252 CAGCTGCCAGCCCATTCT 60.044 61.111 14.25 0.00 43.77 2.40
3224 5291 1.225426 CAGCTGCCAGCCCATTCTA 59.775 57.895 14.25 0.00 43.77 2.10
3225 5292 0.818445 CAGCTGCCAGCCCATTCTAG 60.818 60.000 14.25 0.00 43.77 2.43
3226 5293 2.192187 GCTGCCAGCCCATTCTAGC 61.192 63.158 5.06 0.00 34.48 3.42
3227 5294 1.890979 CTGCCAGCCCATTCTAGCG 60.891 63.158 0.00 0.00 0.00 4.26
3228 5295 3.282920 GCCAGCCCATTCTAGCGC 61.283 66.667 0.00 0.00 0.00 5.92
3229 5296 2.969238 CCAGCCCATTCTAGCGCG 60.969 66.667 0.00 0.00 0.00 6.86
3230 5297 2.106938 CAGCCCATTCTAGCGCGA 59.893 61.111 12.10 0.00 0.00 5.87
3231 5298 1.301244 CAGCCCATTCTAGCGCGAT 60.301 57.895 12.10 5.99 0.00 4.58
3232 5299 1.005630 AGCCCATTCTAGCGCGATC 60.006 57.895 12.10 0.00 0.00 3.69
3233 5300 2.029844 GCCCATTCTAGCGCGATCC 61.030 63.158 12.10 0.00 0.00 3.36
3234 5301 1.367471 CCCATTCTAGCGCGATCCA 59.633 57.895 12.10 0.00 0.00 3.41
3235 5302 0.946221 CCCATTCTAGCGCGATCCAC 60.946 60.000 12.10 0.00 0.00 4.02
3236 5303 0.032678 CCATTCTAGCGCGATCCACT 59.967 55.000 12.10 0.00 0.00 4.00
3237 5304 1.135046 CATTCTAGCGCGATCCACTG 58.865 55.000 12.10 0.00 0.00 3.66
3238 5305 0.747255 ATTCTAGCGCGATCCACTGT 59.253 50.000 12.10 0.00 0.00 3.55
3239 5306 0.530744 TTCTAGCGCGATCCACTGTT 59.469 50.000 12.10 0.00 0.00 3.16
3240 5307 0.179137 TCTAGCGCGATCCACTGTTG 60.179 55.000 12.10 0.00 0.00 3.33
3241 5308 1.148157 CTAGCGCGATCCACTGTTGG 61.148 60.000 12.10 0.00 45.56 3.77
3242 5309 2.572095 TAGCGCGATCCACTGTTGGG 62.572 60.000 12.10 0.00 44.11 4.12
3243 5310 3.499737 CGCGATCCACTGTTGGGC 61.500 66.667 0.00 0.00 44.11 5.36
3244 5311 2.045926 GCGATCCACTGTTGGGCT 60.046 61.111 0.00 0.00 44.11 5.19
3245 5312 1.220749 GCGATCCACTGTTGGGCTA 59.779 57.895 0.00 0.00 44.11 3.93
3246 5313 0.392461 GCGATCCACTGTTGGGCTAA 60.392 55.000 0.00 0.00 44.11 3.09
3247 5314 1.747206 GCGATCCACTGTTGGGCTAAT 60.747 52.381 0.00 0.00 44.11 1.73
3248 5315 1.942657 CGATCCACTGTTGGGCTAATG 59.057 52.381 0.00 0.00 44.11 1.90
3249 5316 2.419990 CGATCCACTGTTGGGCTAATGA 60.420 50.000 0.00 0.00 44.11 2.57
3250 5317 2.787473 TCCACTGTTGGGCTAATGAG 57.213 50.000 0.00 0.00 44.11 2.90
3251 5318 1.281867 TCCACTGTTGGGCTAATGAGG 59.718 52.381 0.00 0.00 44.11 3.86
3260 5327 3.153024 GCTAATGAGGCACCAACGA 57.847 52.632 0.00 0.00 0.00 3.85
3261 5328 0.727398 GCTAATGAGGCACCAACGAC 59.273 55.000 0.00 0.00 0.00 4.34
3262 5329 0.999406 CTAATGAGGCACCAACGACG 59.001 55.000 0.00 0.00 0.00 5.12
3263 5330 0.319083 TAATGAGGCACCAACGACGT 59.681 50.000 0.00 0.00 0.00 4.34
3264 5331 0.949105 AATGAGGCACCAACGACGTC 60.949 55.000 5.18 5.18 0.00 4.34
3265 5332 2.737376 GAGGCACCAACGACGTCC 60.737 66.667 10.58 0.00 0.00 4.79
3266 5333 3.509137 GAGGCACCAACGACGTCCA 62.509 63.158 10.58 0.00 0.00 4.02
3267 5334 2.589442 GGCACCAACGACGTCCAA 60.589 61.111 10.58 0.00 0.00 3.53
3268 5335 1.964373 GGCACCAACGACGTCCAAT 60.964 57.895 10.58 0.00 0.00 3.16
3269 5336 1.495951 GCACCAACGACGTCCAATC 59.504 57.895 10.58 0.00 0.00 2.67
3270 5337 0.949105 GCACCAACGACGTCCAATCT 60.949 55.000 10.58 0.00 0.00 2.40
3271 5338 1.670674 GCACCAACGACGTCCAATCTA 60.671 52.381 10.58 0.00 0.00 1.98
3272 5339 2.888594 CACCAACGACGTCCAATCTAT 58.111 47.619 10.58 0.00 0.00 1.98
3273 5340 2.858344 CACCAACGACGTCCAATCTATC 59.142 50.000 10.58 0.00 0.00 2.08
3274 5341 2.159142 ACCAACGACGTCCAATCTATCC 60.159 50.000 10.58 0.00 0.00 2.59
3275 5342 2.159156 CCAACGACGTCCAATCTATCCA 60.159 50.000 10.58 0.00 0.00 3.41
3276 5343 3.116300 CAACGACGTCCAATCTATCCAG 58.884 50.000 10.58 0.00 0.00 3.86
3277 5344 2.376109 ACGACGTCCAATCTATCCAGT 58.624 47.619 10.58 0.00 0.00 4.00
3278 5345 2.099263 ACGACGTCCAATCTATCCAGTG 59.901 50.000 10.58 0.00 0.00 3.66
3279 5346 2.474816 GACGTCCAATCTATCCAGTGC 58.525 52.381 3.51 0.00 0.00 4.40
3280 5347 1.139058 ACGTCCAATCTATCCAGTGCC 59.861 52.381 0.00 0.00 0.00 5.01
3281 5348 1.869754 CGTCCAATCTATCCAGTGCCG 60.870 57.143 0.00 0.00 0.00 5.69
3282 5349 1.412710 GTCCAATCTATCCAGTGCCGA 59.587 52.381 0.00 0.00 0.00 5.54
3283 5350 1.412710 TCCAATCTATCCAGTGCCGAC 59.587 52.381 0.00 0.00 0.00 4.79
3284 5351 1.541233 CCAATCTATCCAGTGCCGACC 60.541 57.143 0.00 0.00 0.00 4.79
3285 5352 0.389391 AATCTATCCAGTGCCGACCG 59.611 55.000 0.00 0.00 0.00 4.79
3286 5353 0.467474 ATCTATCCAGTGCCGACCGA 60.467 55.000 0.00 0.00 0.00 4.69
3287 5354 0.467474 TCTATCCAGTGCCGACCGAT 60.467 55.000 0.00 0.00 0.00 4.18
3288 5355 0.039074 CTATCCAGTGCCGACCGATC 60.039 60.000 0.00 0.00 0.00 3.69
3289 5356 0.467474 TATCCAGTGCCGACCGATCT 60.467 55.000 0.00 0.00 0.00 2.75
3290 5357 1.330655 ATCCAGTGCCGACCGATCTT 61.331 55.000 0.00 0.00 0.00 2.40
3291 5358 1.811266 CCAGTGCCGACCGATCTTG 60.811 63.158 0.00 0.00 0.00 3.02
3292 5359 1.215382 CAGTGCCGACCGATCTTGA 59.785 57.895 0.00 0.00 0.00 3.02
3293 5360 0.179100 CAGTGCCGACCGATCTTGAT 60.179 55.000 0.00 0.00 0.00 2.57
3294 5361 0.103208 AGTGCCGACCGATCTTGATC 59.897 55.000 0.78 0.78 0.00 2.92
3295 5362 0.103208 GTGCCGACCGATCTTGATCT 59.897 55.000 8.70 0.00 0.00 2.75
3296 5363 0.824109 TGCCGACCGATCTTGATCTT 59.176 50.000 8.70 0.00 0.00 2.40
3297 5364 1.207089 TGCCGACCGATCTTGATCTTT 59.793 47.619 8.70 0.00 0.00 2.52
3298 5365 2.280628 GCCGACCGATCTTGATCTTTT 58.719 47.619 8.70 0.00 0.00 2.27
3299 5366 2.678336 GCCGACCGATCTTGATCTTTTT 59.322 45.455 8.70 0.00 0.00 1.94
3300 5367 3.242446 GCCGACCGATCTTGATCTTTTTC 60.242 47.826 8.70 0.33 0.00 2.29
3301 5368 4.184629 CCGACCGATCTTGATCTTTTTCT 58.815 43.478 8.70 0.00 0.00 2.52
3302 5369 4.631813 CCGACCGATCTTGATCTTTTTCTT 59.368 41.667 8.70 0.00 0.00 2.52
3303 5370 5.446473 CCGACCGATCTTGATCTTTTTCTTG 60.446 44.000 8.70 0.00 0.00 3.02
3304 5371 5.348724 CGACCGATCTTGATCTTTTTCTTGA 59.651 40.000 8.70 0.00 0.00 3.02
3305 5372 6.128553 CGACCGATCTTGATCTTTTTCTTGAA 60.129 38.462 8.70 0.00 0.00 2.69
3306 5373 7.510549 ACCGATCTTGATCTTTTTCTTGAAA 57.489 32.000 8.70 0.00 0.00 2.69
3307 5374 7.940850 ACCGATCTTGATCTTTTTCTTGAAAA 58.059 30.769 8.70 4.61 35.94 2.29
3308 5375 8.413229 ACCGATCTTGATCTTTTTCTTGAAAAA 58.587 29.630 17.01 17.01 36.82 1.94
3330 5397 3.152261 ACACGATCTCGATCTTGTTCC 57.848 47.619 11.79 0.00 44.58 3.62
3331 5398 2.159226 ACACGATCTCGATCTTGTTCCC 60.159 50.000 11.79 0.00 44.58 3.97
3332 5399 2.099921 CACGATCTCGATCTTGTTCCCT 59.900 50.000 6.60 0.00 43.02 4.20
3333 5400 2.359531 ACGATCTCGATCTTGTTCCCTC 59.640 50.000 6.60 0.00 43.02 4.30
3334 5401 2.603412 CGATCTCGATCTTGTTCCCTCG 60.603 54.545 5.47 0.00 43.02 4.63
3335 5402 1.835494 TCTCGATCTTGTTCCCTCGT 58.165 50.000 0.00 0.00 33.10 4.18
3336 5403 1.743958 TCTCGATCTTGTTCCCTCGTC 59.256 52.381 0.00 0.00 33.10 4.20
3337 5404 0.450583 TCGATCTTGTTCCCTCGTCG 59.549 55.000 0.00 0.00 33.10 5.12
3338 5405 0.525668 CGATCTTGTTCCCTCGTCGG 60.526 60.000 0.00 0.00 0.00 4.79
3339 5406 0.815734 GATCTTGTTCCCTCGTCGGA 59.184 55.000 0.00 0.00 33.16 4.55
3340 5407 0.531200 ATCTTGTTCCCTCGTCGGAC 59.469 55.000 0.00 0.00 33.16 4.79
3341 5408 0.538977 TCTTGTTCCCTCGTCGGACT 60.539 55.000 6.57 0.00 33.16 3.85
3342 5409 0.109226 CTTGTTCCCTCGTCGGACTC 60.109 60.000 6.57 0.00 33.16 3.36
3343 5410 1.859427 TTGTTCCCTCGTCGGACTCG 61.859 60.000 6.57 0.00 37.82 4.18
3344 5411 2.037136 GTTCCCTCGTCGGACTCGA 61.037 63.158 6.57 0.00 43.86 4.04
3352 5419 3.844741 TCGGACTCGACACCAACA 58.155 55.556 4.39 0.00 40.88 3.33
3353 5420 1.658114 TCGGACTCGACACCAACAG 59.342 57.895 4.39 0.00 40.88 3.16
3354 5421 2.022129 CGGACTCGACACCAACAGC 61.022 63.158 4.39 0.00 39.00 4.40
3355 5422 2.022129 GGACTCGACACCAACAGCG 61.022 63.158 0.00 0.00 0.00 5.18
3356 5423 2.022129 GACTCGACACCAACAGCGG 61.022 63.158 0.00 0.00 0.00 5.52
3357 5424 2.738521 CTCGACACCAACAGCGGG 60.739 66.667 0.00 0.00 0.00 6.13
3358 5425 4.308458 TCGACACCAACAGCGGGG 62.308 66.667 0.00 0.00 34.65 5.73
3360 5427 4.643387 GACACCAACAGCGGGGCT 62.643 66.667 0.00 0.00 40.77 5.19
3372 5439 4.087892 GGGGCTGCTGCTCGAGAA 62.088 66.667 18.75 4.16 41.55 2.87
3373 5440 2.817396 GGGCTGCTGCTCGAGAAC 60.817 66.667 18.75 4.61 39.59 3.01
3374 5441 2.817396 GGCTGCTGCTCGAGAACC 60.817 66.667 18.75 0.00 39.59 3.62
3375 5442 2.817396 GCTGCTGCTCGAGAACCC 60.817 66.667 18.75 0.00 36.03 4.11
3376 5443 2.977178 CTGCTGCTCGAGAACCCT 59.023 61.111 18.75 0.00 0.00 4.34
3377 5444 1.447489 CTGCTGCTCGAGAACCCTG 60.447 63.158 18.75 3.43 0.00 4.45
3378 5445 2.164865 CTGCTGCTCGAGAACCCTGT 62.165 60.000 18.75 0.00 0.00 4.00
3379 5446 1.739562 GCTGCTCGAGAACCCTGTG 60.740 63.158 18.75 0.00 0.00 3.66
3380 5447 1.967535 CTGCTCGAGAACCCTGTGA 59.032 57.895 18.75 0.00 0.00 3.58
3381 5448 0.534412 CTGCTCGAGAACCCTGTGAT 59.466 55.000 18.75 0.00 0.00 3.06
3382 5449 0.532573 TGCTCGAGAACCCTGTGATC 59.467 55.000 18.75 0.00 0.00 2.92
3383 5450 0.526524 GCTCGAGAACCCTGTGATCG 60.527 60.000 18.75 0.00 34.80 3.69
3384 5451 1.095600 CTCGAGAACCCTGTGATCGA 58.904 55.000 6.58 0.00 39.85 3.59
3385 5452 1.095600 TCGAGAACCCTGTGATCGAG 58.904 55.000 0.00 0.00 37.48 4.04
3386 5453 0.526524 CGAGAACCCTGTGATCGAGC 60.527 60.000 0.00 0.00 35.47 5.03
3387 5454 0.179097 GAGAACCCTGTGATCGAGCC 60.179 60.000 0.00 0.00 0.00 4.70
3388 5455 1.153349 GAACCCTGTGATCGAGCCC 60.153 63.158 0.00 0.00 0.00 5.19
3389 5456 2.595009 GAACCCTGTGATCGAGCCCC 62.595 65.000 0.00 0.00 0.00 5.80
3390 5457 3.866582 CCCTGTGATCGAGCCCCC 61.867 72.222 0.00 0.00 0.00 5.40
3391 5458 2.765807 CCTGTGATCGAGCCCCCT 60.766 66.667 0.00 0.00 0.00 4.79
3392 5459 2.503061 CTGTGATCGAGCCCCCTG 59.497 66.667 0.00 0.00 0.00 4.45
3393 5460 3.746949 CTGTGATCGAGCCCCCTGC 62.747 68.421 0.00 0.00 41.71 4.85
3394 5461 3.785859 GTGATCGAGCCCCCTGCA 61.786 66.667 0.00 0.00 44.83 4.41
3395 5462 3.785859 TGATCGAGCCCCCTGCAC 61.786 66.667 0.00 0.00 44.83 4.57
3396 5463 3.474570 GATCGAGCCCCCTGCACT 61.475 66.667 0.00 0.00 44.83 4.40
3397 5464 3.453070 GATCGAGCCCCCTGCACTC 62.453 68.421 0.00 0.00 44.83 3.51
3404 5471 3.790437 CCCCTGCACTCGCTCCAT 61.790 66.667 0.00 0.00 39.64 3.41
3405 5472 2.513204 CCCTGCACTCGCTCCATG 60.513 66.667 0.00 0.00 39.64 3.66
3406 5473 2.267006 CCTGCACTCGCTCCATGT 59.733 61.111 0.00 0.00 39.64 3.21
3407 5474 2.104859 CCTGCACTCGCTCCATGTG 61.105 63.158 0.00 0.00 39.64 3.21
3410 5477 2.267006 CACTCGCTCCATGTGCCT 59.733 61.111 0.00 0.00 0.00 4.75
3411 5478 1.376424 CACTCGCTCCATGTGCCTT 60.376 57.895 0.00 0.00 0.00 4.35
3412 5479 1.078848 ACTCGCTCCATGTGCCTTC 60.079 57.895 0.00 0.00 0.00 3.46
3413 5480 2.125552 TCGCTCCATGTGCCTTCG 60.126 61.111 0.00 0.00 0.00 3.79
3414 5481 3.869272 CGCTCCATGTGCCTTCGC 61.869 66.667 0.00 0.00 0.00 4.70
3415 5482 3.512516 GCTCCATGTGCCTTCGCC 61.513 66.667 0.00 0.00 0.00 5.54
3416 5483 2.270205 CTCCATGTGCCTTCGCCT 59.730 61.111 0.00 0.00 0.00 5.52
3417 5484 1.817099 CTCCATGTGCCTTCGCCTC 60.817 63.158 0.00 0.00 0.00 4.70
3418 5485 2.046023 CCATGTGCCTTCGCCTCA 60.046 61.111 0.00 0.00 0.00 3.86
3419 5486 1.675310 CCATGTGCCTTCGCCTCAA 60.675 57.895 0.00 0.00 0.00 3.02
3420 5487 1.503542 CATGTGCCTTCGCCTCAAC 59.496 57.895 0.00 0.00 0.00 3.18
3421 5488 1.073025 ATGTGCCTTCGCCTCAACA 59.927 52.632 0.00 0.00 0.00 3.33
3422 5489 0.322816 ATGTGCCTTCGCCTCAACAT 60.323 50.000 0.00 0.00 0.00 2.71
3423 5490 1.236616 TGTGCCTTCGCCTCAACATG 61.237 55.000 0.00 0.00 0.00 3.21
3424 5491 1.073025 TGCCTTCGCCTCAACATGT 59.927 52.632 0.00 0.00 0.00 3.21
3425 5492 1.236616 TGCCTTCGCCTCAACATGTG 61.237 55.000 0.00 0.00 0.00 3.21
3426 5493 1.503542 CCTTCGCCTCAACATGTGC 59.496 57.895 0.00 0.00 0.00 4.57
3427 5494 1.503542 CTTCGCCTCAACATGTGCC 59.496 57.895 0.00 0.00 0.00 5.01
3428 5495 0.957395 CTTCGCCTCAACATGTGCCT 60.957 55.000 0.00 0.00 0.00 4.75
3429 5496 0.955428 TTCGCCTCAACATGTGCCTC 60.955 55.000 0.00 0.00 0.00 4.70
3430 5497 2.401766 CGCCTCAACATGTGCCTCC 61.402 63.158 0.00 0.00 0.00 4.30
3431 5498 2.401766 GCCTCAACATGTGCCTCCG 61.402 63.158 0.00 0.00 0.00 4.63
3432 5499 2.401766 CCTCAACATGTGCCTCCGC 61.402 63.158 0.00 0.00 0.00 5.54
3433 5500 1.672030 CTCAACATGTGCCTCCGCA 60.672 57.895 0.00 0.00 44.78 5.69
3441 5508 4.717629 TGCCTCCGCAAGTCGTCG 62.718 66.667 0.00 0.00 43.74 5.12
3443 5510 4.421479 CCTCCGCAAGTCGTCGCT 62.421 66.667 0.00 0.00 36.19 4.93
3444 5511 2.876645 CTCCGCAAGTCGTCGCTC 60.877 66.667 0.00 0.00 36.19 5.03
3445 5512 4.415332 TCCGCAAGTCGTCGCTCC 62.415 66.667 0.00 0.00 36.19 4.70
3447 5514 4.717629 CGCAAGTCGTCGCTCCCA 62.718 66.667 0.00 0.00 0.00 4.37
3448 5515 2.811317 GCAAGTCGTCGCTCCCAG 60.811 66.667 0.00 0.00 0.00 4.45
3449 5516 2.811317 CAAGTCGTCGCTCCCAGC 60.811 66.667 0.00 0.00 38.02 4.85
3450 5517 3.303135 AAGTCGTCGCTCCCAGCA 61.303 61.111 0.00 0.00 42.58 4.41
3451 5518 3.575351 AAGTCGTCGCTCCCAGCAC 62.575 63.158 0.00 0.00 42.58 4.40
3459 5526 4.785453 CTCCCAGCACCGCCTTCC 62.785 72.222 0.00 0.00 0.00 3.46
3463 5530 4.335647 CAGCACCGCCTTCCCTGT 62.336 66.667 0.00 0.00 0.00 4.00
3464 5531 3.570212 AGCACCGCCTTCCCTGTT 61.570 61.111 0.00 0.00 0.00 3.16
3465 5532 3.365265 GCACCGCCTTCCCTGTTG 61.365 66.667 0.00 0.00 0.00 3.33
3466 5533 2.113139 CACCGCCTTCCCTGTTGT 59.887 61.111 0.00 0.00 0.00 3.32
3467 5534 2.113139 ACCGCCTTCCCTGTTGTG 59.887 61.111 0.00 0.00 0.00 3.33
3468 5535 2.113139 CCGCCTTCCCTGTTGTGT 59.887 61.111 0.00 0.00 0.00 3.72
3469 5536 2.260869 CCGCCTTCCCTGTTGTGTG 61.261 63.158 0.00 0.00 0.00 3.82
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
53 54 2.086054 GTGGAGATCACAGTCGCTTT 57.914 50.000 0.00 0.00 45.39 3.51
144 145 5.662657 AGGTTTGATTTATTGATGAAGGGGG 59.337 40.000 0.00 0.00 0.00 5.40
146 147 7.201857 GGAGAGGTTTGATTTATTGATGAAGGG 60.202 40.741 0.00 0.00 0.00 3.95
157 158 3.396276 TGGTGGTGGAGAGGTTTGATTTA 59.604 43.478 0.00 0.00 0.00 1.40
160 161 1.444933 TGGTGGTGGAGAGGTTTGAT 58.555 50.000 0.00 0.00 0.00 2.57
206 207 1.279271 CCGGAGAAGGAAGTTGTGGAT 59.721 52.381 0.00 0.00 0.00 3.41
251 252 4.148825 CTTCCCTCTCGCCACCGG 62.149 72.222 0.00 0.00 34.56 5.28
260 261 1.273552 CCCCACTCTCTTCTTCCCTCT 60.274 57.143 0.00 0.00 0.00 3.69
290 291 1.673168 GCGCTCTCCATCAAATTCCT 58.327 50.000 0.00 0.00 0.00 3.36
322 326 5.092554 TCGTGGCAAAATCTCCAACTATA 57.907 39.130 0.00 0.00 33.57 1.31
394 398 0.458025 GACTACGAAACCCCTCGCTG 60.458 60.000 0.00 0.00 42.69 5.18
395 399 1.602327 GGACTACGAAACCCCTCGCT 61.602 60.000 0.00 0.00 42.69 4.93
438 442 1.150135 TGGGGAAATTGGGGCTTTACA 59.850 47.619 0.00 0.00 0.00 2.41
450 458 4.683129 GCAGTCAAAACAAACTGGGGAAAT 60.683 41.667 4.83 0.00 42.52 2.17
573 583 0.810031 ATTTCCAACGCCGATCCTCG 60.810 55.000 0.00 0.36 40.07 4.63
614 642 0.969894 AATACTAGCTGCTAGCCCCG 59.030 55.000 31.08 12.99 43.77 5.73
647 677 7.319646 TGTTATTTATTGTTTCACCTCATGGC 58.680 34.615 0.00 0.00 36.63 4.40
752 785 5.424121 AGTGCAAATGTCACAAGTCTAAC 57.576 39.130 0.00 0.00 36.93 2.34
792 848 3.873812 CCCGGCCCGCCTCTAAAT 61.874 66.667 0.00 0.00 0.00 1.40
915 986 6.367983 ACTATTTATAGGACGGTACCAGTGA 58.632 40.000 13.54 0.00 34.69 3.41
918 989 7.750229 TGTACTATTTATAGGACGGTACCAG 57.250 40.000 13.54 7.45 45.31 4.00
919 990 7.255590 GCTTGTACTATTTATAGGACGGTACCA 60.256 40.741 13.54 0.00 45.31 3.25
920 991 7.087007 GCTTGTACTATTTATAGGACGGTACC 58.913 42.308 0.16 0.16 45.31 3.34
921 992 7.651808 TGCTTGTACTATTTATAGGACGGTAC 58.348 38.462 7.45 0.00 45.31 3.34
944 1015 2.981909 TGCTTGTCCTGCTGCTGC 60.982 61.111 8.89 8.89 40.20 5.25
975 1050 4.310769 CAACAAGAGATCGAGGTTGTTCT 58.689 43.478 11.93 0.00 40.32 3.01
976 1051 3.120511 GCAACAAGAGATCGAGGTTGTTC 60.121 47.826 17.56 9.55 40.32 3.18
977 1052 2.808543 GCAACAAGAGATCGAGGTTGTT 59.191 45.455 17.56 14.08 42.45 2.83
1242 1402 4.899239 CTCGATGGAGGCCGTGGC 62.899 72.222 1.16 1.16 36.61 5.01
1367 1527 1.375523 GTCCACGGACGCCTCAATT 60.376 57.895 0.00 0.00 35.30 2.32
1439 1599 2.362369 CGCCTCCAGGTCAGGATGT 61.362 63.158 0.00 0.00 36.99 3.06
1526 1686 3.103911 GCGACGACGTGGTTGGAG 61.104 66.667 18.28 6.16 41.98 3.86
2080 2240 4.691216 AGTCGACAAAAGATTGGAAGTAGC 59.309 41.667 19.50 0.00 41.01 3.58
2412 2577 0.322008 GCCTCACTCCCTGTTCCTTG 60.322 60.000 0.00 0.00 0.00 3.61
2416 2581 1.555075 TGTATGCCTCACTCCCTGTTC 59.445 52.381 0.00 0.00 0.00 3.18
2499 2676 9.961265 TCTGTGTATATACAGTAGCACAATAAC 57.039 33.333 23.92 0.68 46.32 1.89
2504 2681 7.582667 ACATCTGTGTATATACAGTAGCACA 57.417 36.000 23.92 8.35 46.32 4.57
2532 2709 5.332732 CGAAAATTCGTGCTAACTGTACACA 60.333 40.000 7.37 0.00 45.09 3.72
2533 2710 5.070862 CGAAAATTCGTGCTAACTGTACAC 58.929 41.667 7.37 0.00 45.09 2.90
2626 2808 9.624697 TGCAATTAATTCAGTGATTTTGTAGTC 57.375 29.630 5.64 0.00 0.00 2.59
2659 2844 6.349033 CCGGTCCATCTTAAACAGTTTTTAGG 60.349 42.308 3.25 0.70 0.00 2.69
2661 2846 5.048573 GCCGGTCCATCTTAAACAGTTTTTA 60.049 40.000 3.25 0.00 0.00 1.52
2662 2847 4.261867 GCCGGTCCATCTTAAACAGTTTTT 60.262 41.667 3.25 0.00 0.00 1.94
2862 3073 2.125713 CGACGCTGCCATGGTGTA 60.126 61.111 14.67 0.00 0.00 2.90
2879 3090 1.636003 AGTTCAACCAGGATCTTCCCC 59.364 52.381 0.00 0.00 37.19 4.81
2908 3119 9.559732 TCTTTCAGATAATTGTGTTCTTGAAGA 57.440 29.630 0.00 0.00 0.00 2.87
2909 3120 9.823098 CTCTTTCAGATAATTGTGTTCTTGAAG 57.177 33.333 0.00 0.00 0.00 3.02
2912 3123 9.390795 CAACTCTTTCAGATAATTGTGTTCTTG 57.609 33.333 0.00 0.00 0.00 3.02
2916 3127 7.040409 GGACCAACTCTTTCAGATAATTGTGTT 60.040 37.037 0.00 0.00 0.00 3.32
2945 5012 6.831976 AGAAAGACTACAATCAGTTTGAGGT 58.168 36.000 0.00 0.00 38.76 3.85
2955 5022 7.041098 TCAGAGCCAAAAAGAAAGACTACAATC 60.041 37.037 0.00 0.00 0.00 2.67
2957 5024 6.119536 TCAGAGCCAAAAAGAAAGACTACAA 58.880 36.000 0.00 0.00 0.00 2.41
2962 5029 4.201920 ACGTTCAGAGCCAAAAAGAAAGAC 60.202 41.667 0.00 0.00 0.00 3.01
2983 5050 5.926542 TGAGGAAGAACTAAAATGACTCACG 59.073 40.000 0.00 0.00 0.00 4.35
2985 5052 6.936900 CCTTGAGGAAGAACTAAAATGACTCA 59.063 38.462 0.00 0.00 37.39 3.41
3006 5073 3.541632 AGGTGCGGTTATAATGTCCTTG 58.458 45.455 0.00 0.00 0.00 3.61
3007 5074 3.926058 AGGTGCGGTTATAATGTCCTT 57.074 42.857 0.00 0.00 0.00 3.36
3008 5075 5.512576 GGATTAGGTGCGGTTATAATGTCCT 60.513 44.000 0.00 0.00 0.00 3.85
3009 5076 4.694037 GGATTAGGTGCGGTTATAATGTCC 59.306 45.833 0.00 0.00 0.00 4.02
3010 5077 5.408604 CAGGATTAGGTGCGGTTATAATGTC 59.591 44.000 0.00 0.00 0.00 3.06
3011 5078 5.163237 ACAGGATTAGGTGCGGTTATAATGT 60.163 40.000 0.00 0.00 0.00 2.71
3012 5079 5.305585 ACAGGATTAGGTGCGGTTATAATG 58.694 41.667 0.00 0.00 0.00 1.90
3013 5080 5.512576 GGACAGGATTAGGTGCGGTTATAAT 60.513 44.000 0.00 0.00 0.00 1.28
3014 5081 4.202284 GGACAGGATTAGGTGCGGTTATAA 60.202 45.833 0.00 0.00 0.00 0.98
3015 5082 3.322828 GGACAGGATTAGGTGCGGTTATA 59.677 47.826 0.00 0.00 0.00 0.98
3016 5083 2.104281 GGACAGGATTAGGTGCGGTTAT 59.896 50.000 0.00 0.00 0.00 1.89
3017 5084 1.483415 GGACAGGATTAGGTGCGGTTA 59.517 52.381 0.00 0.00 0.00 2.85
3018 5085 0.252197 GGACAGGATTAGGTGCGGTT 59.748 55.000 0.00 0.00 0.00 4.44
3019 5086 0.617820 AGGACAGGATTAGGTGCGGT 60.618 55.000 0.00 0.00 0.00 5.68
3020 5087 0.541863 AAGGACAGGATTAGGTGCGG 59.458 55.000 0.00 0.00 0.00 5.69
3021 5088 2.167693 TGTAAGGACAGGATTAGGTGCG 59.832 50.000 0.00 0.00 0.00 5.34
3022 5089 3.906720 TGTAAGGACAGGATTAGGTGC 57.093 47.619 0.00 0.00 0.00 5.01
3033 5100 6.072728 CGAAAATCCAAATCACTGTAAGGACA 60.073 38.462 0.00 0.00 39.30 4.02
3034 5101 6.314784 CGAAAATCCAAATCACTGTAAGGAC 58.685 40.000 0.00 0.00 39.30 3.85
3035 5102 5.414454 CCGAAAATCCAAATCACTGTAAGGA 59.586 40.000 0.00 0.00 39.30 3.36
3036 5103 5.640732 CCGAAAATCCAAATCACTGTAAGG 58.359 41.667 0.00 0.00 39.30 2.69
3037 5104 5.095490 GCCGAAAATCCAAATCACTGTAAG 58.905 41.667 0.00 0.00 42.29 2.34
3038 5105 4.082463 GGCCGAAAATCCAAATCACTGTAA 60.082 41.667 0.00 0.00 0.00 2.41
3039 5106 3.442273 GGCCGAAAATCCAAATCACTGTA 59.558 43.478 0.00 0.00 0.00 2.74
3040 5107 2.231235 GGCCGAAAATCCAAATCACTGT 59.769 45.455 0.00 0.00 0.00 3.55
3041 5108 2.731968 CGGCCGAAAATCCAAATCACTG 60.732 50.000 24.07 0.00 0.00 3.66
3042 5109 1.472480 CGGCCGAAAATCCAAATCACT 59.528 47.619 24.07 0.00 0.00 3.41
3043 5110 1.201414 ACGGCCGAAAATCCAAATCAC 59.799 47.619 35.90 0.00 0.00 3.06
3044 5111 1.470890 GACGGCCGAAAATCCAAATCA 59.529 47.619 35.90 0.00 0.00 2.57
3045 5112 1.202256 GGACGGCCGAAAATCCAAATC 60.202 52.381 35.90 14.67 0.00 2.17
3046 5113 0.815095 GGACGGCCGAAAATCCAAAT 59.185 50.000 35.90 4.22 0.00 2.32
3047 5114 2.259281 GGACGGCCGAAAATCCAAA 58.741 52.632 35.90 0.00 0.00 3.28
3048 5115 3.990466 GGACGGCCGAAAATCCAA 58.010 55.556 35.90 0.00 0.00 3.53
3058 5125 1.963190 GATCGTGAAAACGGACGGCC 61.963 60.000 0.00 0.00 36.23 6.13
3059 5126 1.012486 AGATCGTGAAAACGGACGGC 61.012 55.000 0.00 0.00 36.23 5.68
3060 5127 0.713883 CAGATCGTGAAAACGGACGG 59.286 55.000 0.00 0.00 36.23 4.79
3061 5128 1.649171 CTCAGATCGTGAAAACGGACG 59.351 52.381 0.00 0.00 33.60 4.79
3062 5129 1.390463 GCTCAGATCGTGAAAACGGAC 59.610 52.381 0.00 0.00 33.60 4.79
3063 5130 1.710013 GCTCAGATCGTGAAAACGGA 58.290 50.000 0.00 0.00 33.60 4.69
3064 5131 0.366871 CGCTCAGATCGTGAAAACGG 59.633 55.000 0.00 0.00 33.60 4.44
3065 5132 1.060713 ACGCTCAGATCGTGAAAACG 58.939 50.000 0.00 0.00 38.88 3.60
3066 5133 2.475111 TGAACGCTCAGATCGTGAAAAC 59.525 45.455 0.00 0.00 40.36 2.43
3067 5134 2.749776 TGAACGCTCAGATCGTGAAAA 58.250 42.857 0.00 0.00 40.36 2.29
3068 5135 2.432206 TGAACGCTCAGATCGTGAAA 57.568 45.000 0.00 0.00 40.36 2.69
3069 5136 2.262211 CATGAACGCTCAGATCGTGAA 58.738 47.619 0.00 0.00 39.99 3.18
3070 5137 1.469767 CCATGAACGCTCAGATCGTGA 60.470 52.381 0.00 0.00 39.99 4.35
3071 5138 0.926155 CCATGAACGCTCAGATCGTG 59.074 55.000 0.00 0.00 40.36 4.35
3072 5139 0.532573 ACCATGAACGCTCAGATCGT 59.467 50.000 0.00 0.00 42.54 3.73
3073 5140 1.203928 GACCATGAACGCTCAGATCG 58.796 55.000 0.00 0.00 34.23 3.69
3074 5141 1.203928 CGACCATGAACGCTCAGATC 58.796 55.000 0.00 0.00 34.23 2.75
3075 5142 0.532573 ACGACCATGAACGCTCAGAT 59.467 50.000 10.43 0.00 34.23 2.90
3076 5143 0.109272 GACGACCATGAACGCTCAGA 60.109 55.000 10.43 0.00 34.23 3.27
3077 5144 0.388520 TGACGACCATGAACGCTCAG 60.389 55.000 10.43 0.00 34.23 3.35
3078 5145 0.388520 CTGACGACCATGAACGCTCA 60.389 55.000 10.43 0.00 35.56 4.26
3079 5146 0.109272 TCTGACGACCATGAACGCTC 60.109 55.000 10.43 8.39 0.00 5.03
3080 5147 0.532573 ATCTGACGACCATGAACGCT 59.467 50.000 10.43 0.71 0.00 5.07
3081 5148 0.924090 GATCTGACGACCATGAACGC 59.076 55.000 10.43 5.60 0.00 4.84
3082 5149 2.568696 AGATCTGACGACCATGAACG 57.431 50.000 0.00 1.78 0.00 3.95
3083 5150 3.369147 CACAAGATCTGACGACCATGAAC 59.631 47.826 0.00 0.00 0.00 3.18
3084 5151 3.006859 ACACAAGATCTGACGACCATGAA 59.993 43.478 0.00 0.00 0.00 2.57
3085 5152 2.562738 ACACAAGATCTGACGACCATGA 59.437 45.455 0.00 0.00 0.00 3.07
3086 5153 2.964740 ACACAAGATCTGACGACCATG 58.035 47.619 0.00 0.00 0.00 3.66
3087 5154 4.801330 TTACACAAGATCTGACGACCAT 57.199 40.909 0.00 0.00 0.00 3.55
3088 5155 4.594123 TTTACACAAGATCTGACGACCA 57.406 40.909 0.00 0.00 0.00 4.02
3089 5156 5.235616 TGTTTTTACACAAGATCTGACGACC 59.764 40.000 0.00 0.00 0.00 4.79
3090 5157 6.018994 ACTGTTTTTACACAAGATCTGACGAC 60.019 38.462 0.00 0.00 0.00 4.34
3091 5158 6.046593 ACTGTTTTTACACAAGATCTGACGA 58.953 36.000 0.00 0.00 0.00 4.20
3092 5159 6.287107 ACTGTTTTTACACAAGATCTGACG 57.713 37.500 0.00 0.00 0.00 4.35
3093 5160 7.968405 ACAAACTGTTTTTACACAAGATCTGAC 59.032 33.333 2.41 0.00 0.00 3.51
3094 5161 7.967854 CACAAACTGTTTTTACACAAGATCTGA 59.032 33.333 2.41 0.00 0.00 3.27
3095 5162 7.253750 GCACAAACTGTTTTTACACAAGATCTG 60.254 37.037 2.41 0.00 0.00 2.90
3096 5163 6.751888 GCACAAACTGTTTTTACACAAGATCT 59.248 34.615 2.41 0.00 0.00 2.75
3097 5164 6.019881 GGCACAAACTGTTTTTACACAAGATC 60.020 38.462 2.41 0.00 0.00 2.75
3098 5165 5.810074 GGCACAAACTGTTTTTACACAAGAT 59.190 36.000 2.41 0.00 0.00 2.40
3099 5166 5.164954 GGCACAAACTGTTTTTACACAAGA 58.835 37.500 2.41 0.00 0.00 3.02
3100 5167 4.031201 CGGCACAAACTGTTTTTACACAAG 59.969 41.667 2.41 0.00 0.00 3.16
3101 5168 3.921021 CGGCACAAACTGTTTTTACACAA 59.079 39.130 2.41 0.00 0.00 3.33
3102 5169 3.057456 ACGGCACAAACTGTTTTTACACA 60.057 39.130 2.41 0.00 0.00 3.72
3103 5170 3.503891 ACGGCACAAACTGTTTTTACAC 58.496 40.909 2.41 0.00 0.00 2.90
3104 5171 3.190744 TGACGGCACAAACTGTTTTTACA 59.809 39.130 2.41 0.00 0.00 2.41
3105 5172 3.544682 GTGACGGCACAAACTGTTTTTAC 59.455 43.478 18.77 0.00 44.51 2.01
3106 5173 3.728268 CGTGACGGCACAAACTGTTTTTA 60.728 43.478 23.63 0.00 45.41 1.52
3107 5174 2.601804 GTGACGGCACAAACTGTTTTT 58.398 42.857 18.77 0.00 44.51 1.94
3108 5175 1.466697 CGTGACGGCACAAACTGTTTT 60.467 47.619 23.63 0.00 45.41 2.43
3109 5176 0.098025 CGTGACGGCACAAACTGTTT 59.902 50.000 23.63 0.00 45.41 2.83
3110 5177 0.741574 TCGTGACGGCACAAACTGTT 60.742 50.000 23.63 0.00 45.41 3.16
3111 5178 0.531974 ATCGTGACGGCACAAACTGT 60.532 50.000 23.63 0.00 45.41 3.55
3112 5179 0.586319 AATCGTGACGGCACAAACTG 59.414 50.000 23.63 4.30 45.41 3.16
3113 5180 1.002900 CAAATCGTGACGGCACAAACT 60.003 47.619 23.63 0.00 45.41 2.66
3114 5181 1.394697 CAAATCGTGACGGCACAAAC 58.605 50.000 23.63 0.00 45.41 2.93
3115 5182 0.309302 CCAAATCGTGACGGCACAAA 59.691 50.000 23.63 9.33 45.41 2.83
3116 5183 1.511318 CCCAAATCGTGACGGCACAA 61.511 55.000 23.63 1.96 45.41 3.33
3117 5184 1.963855 CCCAAATCGTGACGGCACA 60.964 57.895 23.63 9.23 45.41 4.57
3118 5185 1.512156 AACCCAAATCGTGACGGCAC 61.512 55.000 12.69 12.69 41.67 5.01
3119 5186 0.820074 AAACCCAAATCGTGACGGCA 60.820 50.000 4.70 0.00 0.00 5.69
3120 5187 0.312729 AAAACCCAAATCGTGACGGC 59.687 50.000 4.70 0.00 0.00 5.68
3121 5188 1.399215 CGAAAACCCAAATCGTGACGG 60.399 52.381 4.70 0.00 0.00 4.79
3122 5189 1.399215 CCGAAAACCCAAATCGTGACG 60.399 52.381 0.00 0.00 34.90 4.35
3123 5190 1.664874 GCCGAAAACCCAAATCGTGAC 60.665 52.381 0.00 0.00 34.90 3.67
3124 5191 0.594110 GCCGAAAACCCAAATCGTGA 59.406 50.000 0.00 0.00 34.90 4.35
3125 5192 0.596082 AGCCGAAAACCCAAATCGTG 59.404 50.000 0.00 0.00 34.90 4.35
3126 5193 0.596082 CAGCCGAAAACCCAAATCGT 59.404 50.000 0.00 0.00 34.90 3.73
3127 5194 0.596082 ACAGCCGAAAACCCAAATCG 59.404 50.000 0.00 0.00 36.39 3.34
3128 5195 1.067846 GGACAGCCGAAAACCCAAATC 60.068 52.381 0.00 0.00 0.00 2.17
3129 5196 0.966179 GGACAGCCGAAAACCCAAAT 59.034 50.000 0.00 0.00 0.00 2.32
3130 5197 0.106419 AGGACAGCCGAAAACCCAAA 60.106 50.000 0.00 0.00 39.96 3.28
3131 5198 0.821711 CAGGACAGCCGAAAACCCAA 60.822 55.000 0.00 0.00 39.96 4.12
3132 5199 1.228124 CAGGACAGCCGAAAACCCA 60.228 57.895 0.00 0.00 39.96 4.51
3133 5200 1.228154 ACAGGACAGCCGAAAACCC 60.228 57.895 0.00 0.00 39.96 4.11
3134 5201 1.515521 CCACAGGACAGCCGAAAACC 61.516 60.000 0.00 0.00 39.96 3.27
3135 5202 1.515521 CCCACAGGACAGCCGAAAAC 61.516 60.000 0.00 0.00 39.96 2.43
3136 5203 1.228124 CCCACAGGACAGCCGAAAA 60.228 57.895 0.00 0.00 39.96 2.29
3137 5204 2.144078 TCCCACAGGACAGCCGAAA 61.144 57.895 0.00 0.00 37.19 3.46
3138 5205 2.525629 TCCCACAGGACAGCCGAA 60.526 61.111 0.00 0.00 37.19 4.30
3147 5214 2.124403 GGAGCAGCATCCCACAGG 60.124 66.667 0.00 0.00 32.79 4.00
3148 5215 1.451567 CTGGAGCAGCATCCCACAG 60.452 63.158 0.00 0.00 38.72 3.66
3149 5216 1.907222 CTCTGGAGCAGCATCCCACA 61.907 60.000 0.00 0.00 38.72 4.17
3150 5217 1.153208 CTCTGGAGCAGCATCCCAC 60.153 63.158 0.00 0.00 38.72 4.61
3151 5218 2.372890 CCTCTGGAGCAGCATCCCA 61.373 63.158 0.00 0.00 38.72 4.37
3152 5219 2.509916 CCTCTGGAGCAGCATCCC 59.490 66.667 0.00 0.00 38.72 3.85
3153 5220 2.203181 GCCTCTGGAGCAGCATCC 60.203 66.667 0.00 0.00 40.03 3.51
3154 5221 2.203181 GGCCTCTGGAGCAGCATC 60.203 66.667 0.00 0.00 0.00 3.91
3155 5222 4.172512 CGGCCTCTGGAGCAGCAT 62.173 66.667 0.00 0.00 0.00 3.79
3157 5224 3.612247 TTTCGGCCTCTGGAGCAGC 62.612 63.158 0.00 0.00 0.00 5.25
3158 5225 1.743252 GTTTCGGCCTCTGGAGCAG 60.743 63.158 0.00 0.00 0.00 4.24
3159 5226 2.050836 TTGTTTCGGCCTCTGGAGCA 62.051 55.000 0.00 0.00 0.00 4.26
3160 5227 0.889186 TTTGTTTCGGCCTCTGGAGC 60.889 55.000 0.00 0.00 0.00 4.70
3161 5228 1.160137 CTTTGTTTCGGCCTCTGGAG 58.840 55.000 0.00 0.00 0.00 3.86
3162 5229 0.250727 CCTTTGTTTCGGCCTCTGGA 60.251 55.000 0.00 0.00 0.00 3.86
3163 5230 0.250727 TCCTTTGTTTCGGCCTCTGG 60.251 55.000 0.00 0.00 0.00 3.86
3164 5231 0.875059 GTCCTTTGTTTCGGCCTCTG 59.125 55.000 0.00 0.00 0.00 3.35
3165 5232 0.765510 AGTCCTTTGTTTCGGCCTCT 59.234 50.000 0.00 0.00 0.00 3.69
3166 5233 1.157585 GAGTCCTTTGTTTCGGCCTC 58.842 55.000 0.00 0.00 0.00 4.70
3167 5234 0.765510 AGAGTCCTTTGTTTCGGCCT 59.234 50.000 0.00 0.00 0.00 5.19
3168 5235 0.875059 CAGAGTCCTTTGTTTCGGCC 59.125 55.000 0.00 0.00 0.00 6.13
3169 5236 0.875059 CCAGAGTCCTTTGTTTCGGC 59.125 55.000 0.00 0.00 0.00 5.54
3170 5237 1.873591 CACCAGAGTCCTTTGTTTCGG 59.126 52.381 0.00 0.00 0.00 4.30
3171 5238 1.264288 GCACCAGAGTCCTTTGTTTCG 59.736 52.381 0.00 0.00 0.00 3.46
3172 5239 2.033424 GTGCACCAGAGTCCTTTGTTTC 59.967 50.000 5.22 0.00 0.00 2.78
3173 5240 2.024414 GTGCACCAGAGTCCTTTGTTT 58.976 47.619 5.22 0.00 0.00 2.83
3174 5241 1.212935 AGTGCACCAGAGTCCTTTGTT 59.787 47.619 14.63 0.00 0.00 2.83
3175 5242 0.839946 AGTGCACCAGAGTCCTTTGT 59.160 50.000 14.63 0.00 0.00 2.83
3176 5243 1.233019 CAGTGCACCAGAGTCCTTTG 58.767 55.000 14.63 0.00 0.00 2.77
3177 5244 0.109342 CCAGTGCACCAGAGTCCTTT 59.891 55.000 14.63 0.00 0.00 3.11
3178 5245 1.757306 CCAGTGCACCAGAGTCCTT 59.243 57.895 14.63 0.00 0.00 3.36
3179 5246 2.219875 CCCAGTGCACCAGAGTCCT 61.220 63.158 14.63 0.00 0.00 3.85
3180 5247 2.348998 CCCAGTGCACCAGAGTCC 59.651 66.667 14.63 0.00 0.00 3.85
3181 5248 2.359230 GCCCAGTGCACCAGAGTC 60.359 66.667 14.63 0.00 40.77 3.36
3182 5249 3.958860 GGCCCAGTGCACCAGAGT 61.959 66.667 14.63 0.00 43.89 3.24
3205 5272 2.274948 TAGAATGGGCTGGCAGCTGG 62.275 60.000 35.73 2.89 41.99 4.85
3206 5273 0.818445 CTAGAATGGGCTGGCAGCTG 60.818 60.000 35.73 10.11 41.99 4.24
3207 5274 1.530771 CTAGAATGGGCTGGCAGCT 59.469 57.895 35.73 18.90 41.99 4.24
3208 5275 2.192187 GCTAGAATGGGCTGGCAGC 61.192 63.158 30.93 30.93 41.44 5.25
3209 5276 1.890979 CGCTAGAATGGGCTGGCAG 60.891 63.158 10.94 10.94 41.84 4.85
3210 5277 2.190313 CGCTAGAATGGGCTGGCA 59.810 61.111 2.88 0.00 41.84 4.92
3211 5278 3.282920 GCGCTAGAATGGGCTGGC 61.283 66.667 0.00 0.00 41.74 4.85
3212 5279 2.721971 ATCGCGCTAGAATGGGCTGG 62.722 60.000 5.56 0.00 42.62 4.85
3213 5280 1.287730 GATCGCGCTAGAATGGGCTG 61.288 60.000 5.56 0.00 42.62 4.85
3214 5281 1.005630 GATCGCGCTAGAATGGGCT 60.006 57.895 5.56 0.00 42.62 5.19
3215 5282 2.029844 GGATCGCGCTAGAATGGGC 61.030 63.158 5.56 0.00 41.60 5.36
3216 5283 0.946221 GTGGATCGCGCTAGAATGGG 60.946 60.000 5.56 0.00 0.00 4.00
3217 5284 0.032678 AGTGGATCGCGCTAGAATGG 59.967 55.000 5.56 0.00 0.00 3.16
3218 5285 1.135046 CAGTGGATCGCGCTAGAATG 58.865 55.000 5.56 0.00 0.00 2.67
3219 5286 0.747255 ACAGTGGATCGCGCTAGAAT 59.253 50.000 5.56 0.00 0.00 2.40
3220 5287 0.530744 AACAGTGGATCGCGCTAGAA 59.469 50.000 5.56 0.00 0.00 2.10
3221 5288 0.179137 CAACAGTGGATCGCGCTAGA 60.179 55.000 5.56 0.00 0.00 2.43
3222 5289 2.291843 CAACAGTGGATCGCGCTAG 58.708 57.895 5.56 0.00 0.00 3.42
3223 5290 4.494811 CAACAGTGGATCGCGCTA 57.505 55.556 5.56 0.00 0.00 4.26
3232 5299 1.755179 CCTCATTAGCCCAACAGTGG 58.245 55.000 0.00 0.00 45.53 4.00
3233 5300 1.098050 GCCTCATTAGCCCAACAGTG 58.902 55.000 0.00 0.00 0.00 3.66
3234 5301 0.698238 TGCCTCATTAGCCCAACAGT 59.302 50.000 0.00 0.00 0.00 3.55
3235 5302 1.098050 GTGCCTCATTAGCCCAACAG 58.902 55.000 0.00 0.00 0.00 3.16
3236 5303 0.323360 GGTGCCTCATTAGCCCAACA 60.323 55.000 0.00 0.00 0.00 3.33
3237 5304 0.323360 TGGTGCCTCATTAGCCCAAC 60.323 55.000 0.00 0.00 30.66 3.77
3238 5305 0.407528 TTGGTGCCTCATTAGCCCAA 59.592 50.000 0.00 0.00 37.86 4.12
3239 5306 0.323360 GTTGGTGCCTCATTAGCCCA 60.323 55.000 0.00 0.00 0.00 5.36
3240 5307 1.376609 CGTTGGTGCCTCATTAGCCC 61.377 60.000 0.00 0.00 0.00 5.19
3241 5308 0.392461 TCGTTGGTGCCTCATTAGCC 60.392 55.000 0.00 0.00 0.00 3.93
3242 5309 0.727398 GTCGTTGGTGCCTCATTAGC 59.273 55.000 0.00 0.00 0.00 3.09
3243 5310 0.999406 CGTCGTTGGTGCCTCATTAG 59.001 55.000 0.00 0.00 0.00 1.73
3244 5311 0.319083 ACGTCGTTGGTGCCTCATTA 59.681 50.000 0.00 0.00 0.00 1.90
3245 5312 0.949105 GACGTCGTTGGTGCCTCATT 60.949 55.000 0.00 0.00 0.00 2.57
3246 5313 1.374252 GACGTCGTTGGTGCCTCAT 60.374 57.895 0.00 0.00 0.00 2.90
3247 5314 2.028484 GACGTCGTTGGTGCCTCA 59.972 61.111 0.00 0.00 0.00 3.86
3248 5315 2.737376 GGACGTCGTTGGTGCCTC 60.737 66.667 9.92 0.00 0.00 4.70
3249 5316 2.391724 ATTGGACGTCGTTGGTGCCT 62.392 55.000 9.92 0.00 0.00 4.75
3250 5317 1.908066 GATTGGACGTCGTTGGTGCC 61.908 60.000 9.92 0.00 0.00 5.01
3251 5318 0.949105 AGATTGGACGTCGTTGGTGC 60.949 55.000 9.92 0.00 0.00 5.01
3252 5319 2.357327 TAGATTGGACGTCGTTGGTG 57.643 50.000 9.92 0.00 0.00 4.17
3253 5320 2.159142 GGATAGATTGGACGTCGTTGGT 60.159 50.000 9.92 0.00 0.00 3.67
3254 5321 2.159156 TGGATAGATTGGACGTCGTTGG 60.159 50.000 9.92 0.00 0.00 3.77
3255 5322 3.116300 CTGGATAGATTGGACGTCGTTG 58.884 50.000 9.92 0.00 0.00 4.10
3256 5323 2.758979 ACTGGATAGATTGGACGTCGTT 59.241 45.455 9.92 0.00 0.00 3.85
3257 5324 2.099263 CACTGGATAGATTGGACGTCGT 59.901 50.000 9.92 0.00 0.00 4.34
3258 5325 2.732366 CACTGGATAGATTGGACGTCG 58.268 52.381 9.92 0.00 0.00 5.12
3259 5326 2.474816 GCACTGGATAGATTGGACGTC 58.525 52.381 7.13 7.13 0.00 4.34
3260 5327 1.139058 GGCACTGGATAGATTGGACGT 59.861 52.381 0.00 0.00 0.00 4.34
3261 5328 1.869754 CGGCACTGGATAGATTGGACG 60.870 57.143 0.00 0.00 0.00 4.79
3262 5329 1.412710 TCGGCACTGGATAGATTGGAC 59.587 52.381 0.00 0.00 0.00 4.02
3263 5330 1.412710 GTCGGCACTGGATAGATTGGA 59.587 52.381 0.00 0.00 0.00 3.53
3264 5331 1.541233 GGTCGGCACTGGATAGATTGG 60.541 57.143 0.00 0.00 0.00 3.16
3265 5332 1.869754 CGGTCGGCACTGGATAGATTG 60.870 57.143 0.00 0.00 0.00 2.67
3266 5333 0.389391 CGGTCGGCACTGGATAGATT 59.611 55.000 0.00 0.00 0.00 2.40
3267 5334 0.467474 TCGGTCGGCACTGGATAGAT 60.467 55.000 0.00 0.00 0.00 1.98
3268 5335 0.467474 ATCGGTCGGCACTGGATAGA 60.467 55.000 0.00 0.00 0.00 1.98
3269 5336 0.039074 GATCGGTCGGCACTGGATAG 60.039 60.000 0.00 0.00 0.00 2.08
3270 5337 0.467474 AGATCGGTCGGCACTGGATA 60.467 55.000 0.00 0.00 0.00 2.59
3271 5338 1.330655 AAGATCGGTCGGCACTGGAT 61.331 55.000 0.00 0.00 0.00 3.41
3272 5339 1.982395 AAGATCGGTCGGCACTGGA 60.982 57.895 0.00 0.00 0.00 3.86
3273 5340 1.811266 CAAGATCGGTCGGCACTGG 60.811 63.158 0.00 0.00 0.00 4.00
3274 5341 0.179100 ATCAAGATCGGTCGGCACTG 60.179 55.000 0.00 0.00 0.00 3.66
3275 5342 0.103208 GATCAAGATCGGTCGGCACT 59.897 55.000 0.00 0.00 0.00 4.40
3276 5343 0.103208 AGATCAAGATCGGTCGGCAC 59.897 55.000 4.54 0.00 42.48 5.01
3277 5344 0.824109 AAGATCAAGATCGGTCGGCA 59.176 50.000 4.54 0.00 42.48 5.69
3278 5345 1.941325 AAAGATCAAGATCGGTCGGC 58.059 50.000 4.54 0.00 42.48 5.54
3279 5346 4.184629 AGAAAAAGATCAAGATCGGTCGG 58.815 43.478 4.54 0.00 42.48 4.79
3280 5347 5.348724 TCAAGAAAAAGATCAAGATCGGTCG 59.651 40.000 4.54 0.00 42.48 4.79
3281 5348 6.727824 TCAAGAAAAAGATCAAGATCGGTC 57.272 37.500 4.54 0.00 42.48 4.79
3282 5349 7.510549 TTTCAAGAAAAAGATCAAGATCGGT 57.489 32.000 4.54 0.00 42.48 4.69
3283 5350 8.801715 TTTTTCAAGAAAAAGATCAAGATCGG 57.198 30.769 14.74 0.00 43.08 4.18
3312 5379 2.359531 GAGGGAACAAGATCGAGATCGT 59.640 50.000 7.37 1.82 42.48 3.73
3313 5380 2.603412 CGAGGGAACAAGATCGAGATCG 60.603 54.545 7.37 0.00 42.48 3.69
3314 5381 2.359531 ACGAGGGAACAAGATCGAGATC 59.640 50.000 5.00 5.00 38.50 2.75
3315 5382 2.359531 GACGAGGGAACAAGATCGAGAT 59.640 50.000 0.00 0.00 38.50 2.75
3316 5383 1.743958 GACGAGGGAACAAGATCGAGA 59.256 52.381 0.00 0.00 38.50 4.04
3317 5384 1.532090 CGACGAGGGAACAAGATCGAG 60.532 57.143 0.00 0.00 38.50 4.04
3318 5385 0.450583 CGACGAGGGAACAAGATCGA 59.549 55.000 0.00 0.00 38.50 3.59
3319 5386 0.525668 CCGACGAGGGAACAAGATCG 60.526 60.000 0.00 0.00 40.86 3.69
3320 5387 0.815734 TCCGACGAGGGAACAAGATC 59.184 55.000 0.00 0.00 41.52 2.75
3321 5388 0.531200 GTCCGACGAGGGAACAAGAT 59.469 55.000 0.00 0.00 41.52 2.40
3322 5389 0.538977 AGTCCGACGAGGGAACAAGA 60.539 55.000 0.00 0.00 41.52 3.02
3323 5390 0.109226 GAGTCCGACGAGGGAACAAG 60.109 60.000 0.00 0.00 41.52 3.16
3324 5391 1.859427 CGAGTCCGACGAGGGAACAA 61.859 60.000 0.00 0.00 41.52 2.83
3325 5392 2.330372 CGAGTCCGACGAGGGAACA 61.330 63.158 0.00 0.00 41.52 3.18
3326 5393 2.037136 TCGAGTCCGACGAGGGAAC 61.037 63.158 0.00 0.00 40.30 3.62
3327 5394 2.348620 TCGAGTCCGACGAGGGAA 59.651 61.111 0.00 0.00 40.30 3.97
3335 5402 1.658114 CTGTTGGTGTCGAGTCCGA 59.342 57.895 0.00 0.00 43.35 4.55
3336 5403 2.022129 GCTGTTGGTGTCGAGTCCG 61.022 63.158 0.00 0.00 37.07 4.79
3337 5404 2.022129 CGCTGTTGGTGTCGAGTCC 61.022 63.158 0.00 0.00 0.00 3.85
3338 5405 2.022129 CCGCTGTTGGTGTCGAGTC 61.022 63.158 0.00 0.00 0.00 3.36
3339 5406 2.029073 CCGCTGTTGGTGTCGAGT 59.971 61.111 0.00 0.00 0.00 4.18
3340 5407 2.738521 CCCGCTGTTGGTGTCGAG 60.739 66.667 0.00 0.00 0.00 4.04
3341 5408 4.308458 CCCCGCTGTTGGTGTCGA 62.308 66.667 0.00 0.00 0.00 4.20
3343 5410 4.643387 AGCCCCGCTGTTGGTGTC 62.643 66.667 0.00 0.00 37.57 3.67
3355 5422 4.087892 TTCTCGAGCAGCAGCCCC 62.088 66.667 7.81 0.00 43.56 5.80
3356 5423 2.817396 GTTCTCGAGCAGCAGCCC 60.817 66.667 7.81 0.00 43.56 5.19
3357 5424 2.817396 GGTTCTCGAGCAGCAGCC 60.817 66.667 7.81 0.00 43.56 4.85
3358 5425 2.817396 GGGTTCTCGAGCAGCAGC 60.817 66.667 15.87 5.65 42.56 5.25
3359 5426 1.447489 CAGGGTTCTCGAGCAGCAG 60.447 63.158 15.87 4.31 0.00 4.24
3360 5427 2.210013 ACAGGGTTCTCGAGCAGCA 61.210 57.895 15.87 0.00 0.00 4.41
3361 5428 1.739562 CACAGGGTTCTCGAGCAGC 60.740 63.158 7.81 6.64 0.00 5.25
3362 5429 0.534412 ATCACAGGGTTCTCGAGCAG 59.466 55.000 7.81 0.00 0.00 4.24
3363 5430 0.532573 GATCACAGGGTTCTCGAGCA 59.467 55.000 7.81 0.00 0.00 4.26
3364 5431 0.526524 CGATCACAGGGTTCTCGAGC 60.527 60.000 7.81 0.00 0.00 5.03
3365 5432 1.064803 CTCGATCACAGGGTTCTCGAG 59.935 57.143 5.93 5.93 46.16 4.04
3366 5433 1.095600 CTCGATCACAGGGTTCTCGA 58.904 55.000 0.00 0.00 36.92 4.04
3367 5434 0.526524 GCTCGATCACAGGGTTCTCG 60.527 60.000 0.00 0.00 0.00 4.04
3368 5435 0.179097 GGCTCGATCACAGGGTTCTC 60.179 60.000 0.00 0.00 0.00 2.87
3369 5436 1.617947 GGGCTCGATCACAGGGTTCT 61.618 60.000 0.00 0.00 0.00 3.01
3370 5437 1.153349 GGGCTCGATCACAGGGTTC 60.153 63.158 0.00 0.00 0.00 3.62
3371 5438 2.670148 GGGGCTCGATCACAGGGTT 61.670 63.158 0.00 0.00 0.00 4.11
3372 5439 3.083997 GGGGCTCGATCACAGGGT 61.084 66.667 0.00 0.00 0.00 4.34
3373 5440 3.866582 GGGGGCTCGATCACAGGG 61.867 72.222 0.00 0.00 0.00 4.45
3374 5441 2.765807 AGGGGGCTCGATCACAGG 60.766 66.667 0.00 0.00 0.00 4.00
3375 5442 2.503061 CAGGGGGCTCGATCACAG 59.497 66.667 0.00 0.00 0.00 3.66
3376 5443 3.785859 GCAGGGGGCTCGATCACA 61.786 66.667 0.00 0.00 40.25 3.58
3377 5444 3.785859 TGCAGGGGGCTCGATCAC 61.786 66.667 0.00 0.00 45.15 3.06
3378 5445 3.785859 GTGCAGGGGGCTCGATCA 61.786 66.667 0.00 0.00 45.15 2.92
3379 5446 3.453070 GAGTGCAGGGGGCTCGATC 62.453 68.421 0.00 0.00 45.15 3.69
3380 5447 3.474570 GAGTGCAGGGGGCTCGAT 61.475 66.667 0.00 0.00 45.15 3.59
3387 5454 3.790437 ATGGAGCGAGTGCAGGGG 61.790 66.667 0.00 0.00 46.23 4.79
3388 5455 2.513204 CATGGAGCGAGTGCAGGG 60.513 66.667 0.00 0.00 46.23 4.45
3389 5456 2.104859 CACATGGAGCGAGTGCAGG 61.105 63.158 0.00 0.00 46.23 4.85
3390 5457 3.482809 CACATGGAGCGAGTGCAG 58.517 61.111 0.00 0.00 46.23 4.41
3393 5460 1.364626 GAAGGCACATGGAGCGAGTG 61.365 60.000 0.00 0.00 36.39 3.51
3394 5461 1.078848 GAAGGCACATGGAGCGAGT 60.079 57.895 0.00 0.00 0.00 4.18
3395 5462 2.169789 CGAAGGCACATGGAGCGAG 61.170 63.158 0.00 0.00 0.00 5.03
3396 5463 2.125552 CGAAGGCACATGGAGCGA 60.126 61.111 0.00 0.00 0.00 4.93
3397 5464 3.869272 GCGAAGGCACATGGAGCG 61.869 66.667 0.00 0.00 39.62 5.03
3408 5475 1.503542 GCACATGTTGAGGCGAAGG 59.496 57.895 0.00 0.00 0.00 3.46
3409 5476 0.957395 AGGCACATGTTGAGGCGAAG 60.957 55.000 0.00 0.00 38.46 3.79
3410 5477 0.955428 GAGGCACATGTTGAGGCGAA 60.955 55.000 0.00 0.00 38.46 4.70
3411 5478 1.375908 GAGGCACATGTTGAGGCGA 60.376 57.895 0.00 0.00 38.46 5.54
3412 5479 2.401766 GGAGGCACATGTTGAGGCG 61.402 63.158 0.00 0.00 38.46 5.52
3413 5480 2.401766 CGGAGGCACATGTTGAGGC 61.402 63.158 0.00 0.00 33.95 4.70
3414 5481 2.401766 GCGGAGGCACATGTTGAGG 61.402 63.158 0.00 0.00 39.62 3.86
3415 5482 1.672030 TGCGGAGGCACATGTTGAG 60.672 57.895 0.00 0.00 46.21 3.02
3416 5483 2.429494 TGCGGAGGCACATGTTGA 59.571 55.556 0.00 0.00 46.21 3.18
3426 5493 4.421479 AGCGACGACTTGCGGAGG 62.421 66.667 0.00 0.00 46.49 4.30
3427 5494 2.876645 GAGCGACGACTTGCGGAG 60.877 66.667 0.00 0.00 46.49 4.63
3428 5495 4.415332 GGAGCGACGACTTGCGGA 62.415 66.667 0.00 0.00 46.49 5.54
3431 5498 2.811317 CTGGGAGCGACGACTTGC 60.811 66.667 0.00 0.00 0.00 4.01
3432 5499 2.811317 GCTGGGAGCGACGACTTG 60.811 66.667 0.00 0.00 0.00 3.16
3433 5500 3.303135 TGCTGGGAGCGACGACTT 61.303 61.111 0.00 0.00 46.26 3.01
3434 5501 4.057428 GTGCTGGGAGCGACGACT 62.057 66.667 0.00 0.00 46.26 4.18
3442 5509 4.785453 GGAAGGCGGTGCTGGGAG 62.785 72.222 0.00 0.00 0.00 4.30
3446 5513 3.850098 AACAGGGAAGGCGGTGCTG 62.850 63.158 0.00 0.00 0.00 4.41
3447 5514 3.570212 AACAGGGAAGGCGGTGCT 61.570 61.111 0.00 0.00 0.00 4.40
3448 5515 3.365265 CAACAGGGAAGGCGGTGC 61.365 66.667 0.00 0.00 0.00 5.01
3449 5516 2.113139 ACAACAGGGAAGGCGGTG 59.887 61.111 0.00 0.00 0.00 4.94
3450 5517 2.113139 CACAACAGGGAAGGCGGT 59.887 61.111 0.00 0.00 0.00 5.68
3451 5518 2.113139 ACACAACAGGGAAGGCGG 59.887 61.111 0.00 0.00 0.00 6.13
3452 5519 3.343972 CACACAACAGGGAAGGCG 58.656 61.111 0.00 0.00 0.00 5.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.