Multiple sequence alignment - TraesCS5B01G335000

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G335000 chr5B 100.000 4403 0 0 889 5291 518293545 518297947 0.000000e+00 8131.0
1 TraesCS5B01G335000 chr5B 100.000 687 0 0 1 687 518292657 518293343 0.000000e+00 1269.0
2 TraesCS5B01G335000 chr5B 93.358 271 18 0 4907 5177 684919071 684919341 8.250000e-108 401.0
3 TraesCS5B01G335000 chr5D 95.923 2085 73 7 980 3055 429024747 429026828 0.000000e+00 3369.0
4 TraesCS5B01G335000 chr5D 95.475 1746 56 12 3074 4813 429026941 429028669 0.000000e+00 2765.0
5 TraesCS5B01G335000 chr5D 86.753 619 52 14 20 614 429023615 429024227 0.000000e+00 662.0
6 TraesCS5B01G335000 chr5D 99.145 117 1 0 5175 5291 47093570 47093454 1.490000e-50 211.0
7 TraesCS5B01G335000 chr5D 100.000 34 0 0 4865 4898 361206279 361206312 4.420000e-06 63.9
8 TraesCS5B01G335000 chr5D 100.000 33 0 0 4866 4898 397071848 397071816 1.590000e-05 62.1
9 TraesCS5B01G335000 chr5A 93.954 2117 90 17 967 3055 544609968 544612074 0.000000e+00 3166.0
10 TraesCS5B01G335000 chr5A 94.044 1763 59 19 3074 4818 544612209 544613943 0.000000e+00 2632.0
11 TraesCS5B01G335000 chr5A 92.553 282 19 2 4907 5187 470042977 470042697 2.290000e-108 403.0
12 TraesCS5B01G335000 chr5A 93.015 272 19 0 4907 5178 632012704 632012433 1.070000e-106 398.0
13 TraesCS5B01G335000 chr5A 96.482 199 6 1 368 566 544609221 544609418 1.420000e-85 327.0
14 TraesCS5B01G335000 chr5A 90.000 60 2 1 567 622 544609439 544609498 2.040000e-09 75.0
15 TraesCS5B01G335000 chr5A 83.333 72 10 2 172 242 426719421 426719351 1.230000e-06 65.8
16 TraesCS5B01G335000 chr5A 79.167 96 16 4 172 265 584680741 584680648 4.420000e-06 63.9
17 TraesCS5B01G335000 chr2A 84.731 1133 103 29 1961 3052 19833849 19834952 0.000000e+00 1070.0
18 TraesCS5B01G335000 chr2A 85.037 949 85 22 1844 2766 734977804 734976887 0.000000e+00 913.0
19 TraesCS5B01G335000 chr2A 85.553 533 65 8 3252 3779 734973931 734973406 1.000000e-151 547.0
20 TraesCS5B01G335000 chr2A 85.408 466 56 7 3326 3779 19835292 19835757 1.720000e-129 473.0
21 TraesCS5B01G335000 chr2A 86.755 302 32 7 2758 3055 734974851 734974554 3.950000e-86 329.0
22 TraesCS5B01G335000 chr2A 85.437 206 21 3 3074 3279 19835093 19835289 6.950000e-49 206.0
23 TraesCS5B01G335000 chr1A 85.673 1040 100 23 2048 3054 590827697 590828720 0.000000e+00 1050.0
24 TraesCS5B01G335000 chr1A 84.681 235 27 5 3074 3308 590828859 590829084 5.330000e-55 226.0
25 TraesCS5B01G335000 chr1A 82.609 69 8 4 176 242 534899356 534899422 2.060000e-04 58.4
26 TraesCS5B01G335000 chr1A 88.889 45 3 2 199 242 534880493 534880536 3.000000e-03 54.7
27 TraesCS5B01G335000 chr3A 85.427 1043 103 28 2048 3054 22142837 22143866 0.000000e+00 1038.0
28 TraesCS5B01G335000 chr3A 92.989 271 19 0 4907 5177 581616711 581616441 3.840000e-106 396.0
29 TraesCS5B01G335000 chr3A 85.892 241 25 7 3074 3314 22144005 22144236 1.140000e-61 248.0
30 TraesCS5B01G335000 chr4B 85.345 1044 100 30 2048 3054 169933123 169934150 0.000000e+00 1031.0
31 TraesCS5B01G335000 chr4B 87.179 234 20 6 3074 3306 169934289 169934513 1.890000e-64 257.0
32 TraesCS5B01G335000 chr6A 82.117 699 67 20 1844 2539 252818295 252817652 3.600000e-151 545.0
33 TraesCS5B01G335000 chr2D 85.714 399 50 4 3382 3779 89206421 89206029 1.060000e-111 414.0
34 TraesCS5B01G335000 chr2D 85.464 399 51 4 3382 3779 104910495 104910887 4.930000e-110 409.0
35 TraesCS5B01G335000 chr3D 94.052 269 16 0 4907 5175 145199371 145199639 4.930000e-110 409.0
36 TraesCS5B01G335000 chr3D 99.145 117 1 0 5175 5291 57186200 57186316 1.490000e-50 211.0
37 TraesCS5B01G335000 chr3D 99.145 117 1 0 5175 5291 575602816 575602700 1.490000e-50 211.0
38 TraesCS5B01G335000 chr3D 99.145 117 1 0 5175 5291 584823520 584823404 1.490000e-50 211.0
39 TraesCS5B01G335000 chr2B 93.750 272 17 0 4907 5178 160951864 160951593 4.930000e-110 409.0
40 TraesCS5B01G335000 chr2B 93.358 271 18 0 4907 5177 592766914 592766644 8.250000e-108 401.0
41 TraesCS5B01G335000 chr2B 95.000 40 0 1 4859 4898 580011482 580011519 1.590000e-05 62.1
42 TraesCS5B01G335000 chr7B 93.015 272 13 3 4907 5178 725395223 725395488 4.970000e-105 392.0
43 TraesCS5B01G335000 chr6B 92.674 273 19 1 4907 5179 66750755 66750484 4.970000e-105 392.0
44 TraesCS5B01G335000 chr7A 83.960 399 53 6 3382 3779 594575213 594575601 6.470000e-99 372.0
45 TraesCS5B01G335000 chr7D 99.145 117 1 0 5175 5291 154195806 154195690 1.490000e-50 211.0
46 TraesCS5B01G335000 chr7D 99.145 117 1 0 5175 5291 154200557 154200441 1.490000e-50 211.0
47 TraesCS5B01G335000 chr7D 86.486 74 6 4 171 242 69627707 69627778 1.580000e-10 78.7
48 TraesCS5B01G335000 chr6D 99.145 117 1 0 5175 5291 173904398 173904282 1.490000e-50 211.0
49 TraesCS5B01G335000 chr6D 100.000 33 0 0 4866 4898 173904425 173904393 1.590000e-05 62.1
50 TraesCS5B01G335000 chr6D 100.000 33 0 0 4866 4898 173909184 173909152 1.590000e-05 62.1
51 TraesCS5B01G335000 chr4D 99.145 117 1 0 5175 5291 469587324 469587208 1.490000e-50 211.0
52 TraesCS5B01G335000 chr4D 80.000 100 18 2 177 276 374293443 374293346 7.350000e-09 73.1
53 TraesCS5B01G335000 chr4D 100.000 33 0 0 4866 4898 469587351 469587319 1.590000e-05 62.1
54 TraesCS5B01G335000 chr1D 99.145 117 1 0 5175 5291 388987319 388987435 1.490000e-50 211.0
55 TraesCS5B01G335000 chr1D 100.000 34 0 0 4865 4898 388982560 388982593 4.420000e-06 63.9
56 TraesCS5B01G335000 chr1D 100.000 33 0 0 4866 4898 9801852 9801820 1.590000e-05 62.1
57 TraesCS5B01G335000 chr1D 100.000 33 0 0 4866 4898 388987292 388987324 1.590000e-05 62.1
58 TraesCS5B01G335000 chr4A 83.505 97 14 2 177 273 90088683 90088777 7.300000e-14 89.8
59 TraesCS5B01G335000 chr4A 100.000 29 0 0 214 242 469104991 469104963 3.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G335000 chr5B 518292657 518297947 5290 False 4700.000000 8131 100.000000 1 5291 2 chr5B.!!$F2 5290
1 TraesCS5B01G335000 chr5D 429023615 429028669 5054 False 2265.333333 3369 92.717000 20 4813 3 chr5D.!!$F2 4793
2 TraesCS5B01G335000 chr5A 544609221 544613943 4722 False 1550.000000 3166 93.620000 368 4818 4 chr5A.!!$F1 4450
3 TraesCS5B01G335000 chr2A 734973406 734977804 4398 True 596.333333 913 85.781667 1844 3779 3 chr2A.!!$R1 1935
4 TraesCS5B01G335000 chr2A 19833849 19835757 1908 False 583.000000 1070 85.192000 1961 3779 3 chr2A.!!$F1 1818
5 TraesCS5B01G335000 chr1A 590827697 590829084 1387 False 638.000000 1050 85.177000 2048 3308 2 chr1A.!!$F3 1260
6 TraesCS5B01G335000 chr3A 22142837 22144236 1399 False 643.000000 1038 85.659500 2048 3314 2 chr3A.!!$F1 1266
7 TraesCS5B01G335000 chr4B 169933123 169934513 1390 False 644.000000 1031 86.262000 2048 3306 2 chr4B.!!$F1 1258
8 TraesCS5B01G335000 chr6A 252817652 252818295 643 True 545.000000 545 82.117000 1844 2539 1 chr6A.!!$R1 695

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
19 20 0.031857 TTGTTGCAAGCAATGTCCCG 59.968 50.000 11.00 0.0 38.28 5.14 F
21 22 0.109597 GTTGCAAGCAATGTCCCGAG 60.110 55.000 11.00 0.0 38.28 4.63 F
915 948 0.179001 ACTTTGACTTTGACCCCCGG 60.179 55.000 0.00 0.0 0.00 5.73 F
2213 2430 1.410083 GCATGTGCCCCTGGAGATTAA 60.410 52.381 0.00 0.0 34.31 1.40 F
2323 2549 1.171308 CTTTGCAGTCATGTCCTGGG 58.829 55.000 14.19 0.0 0.00 4.45 F
3067 5389 1.561542 ACTGATAGCCCAGGTCTTTGG 59.438 52.381 0.00 0.0 38.44 3.28 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2084 2299 4.584638 ATGTAATGACACAGGGCCTTTA 57.415 40.909 1.32 0.0 38.76 1.85 R
2103 2318 5.920193 AGTGTATCCAAACCAAATCCATG 57.080 39.130 0.00 0.0 0.00 3.66 R
2261 2480 1.867233 GGCTGTGTGCGGATATTACAG 59.133 52.381 0.00 0.0 44.05 2.74 R
3056 5378 0.179029 ACACGAACCCAAAGACCTGG 60.179 55.000 0.00 0.0 36.10 4.45 R
3336 6093 0.179043 TCAGCTTACCCGTGCAACAA 60.179 50.000 0.00 0.0 35.74 2.83 R
4856 7646 0.034767 CCCACATGACAGGTGCTGAT 60.035 55.000 14.66 0.0 35.18 2.90 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
18 19 3.984838 TTGTTGCAAGCAATGTCCC 57.015 47.368 11.00 0.00 38.28 4.46
19 20 0.031857 TTGTTGCAAGCAATGTCCCG 59.968 50.000 11.00 0.00 38.28 5.14
20 21 0.821301 TGTTGCAAGCAATGTCCCGA 60.821 50.000 11.00 0.00 38.28 5.14
21 22 0.109597 GTTGCAAGCAATGTCCCGAG 60.110 55.000 11.00 0.00 38.28 4.63
22 23 1.243342 TTGCAAGCAATGTCCCGAGG 61.243 55.000 2.89 0.00 0.00 4.63
23 24 2.409870 GCAAGCAATGTCCCGAGGG 61.410 63.158 0.65 0.65 0.00 4.30
24 25 1.299648 CAAGCAATGTCCCGAGGGA 59.700 57.895 6.80 6.80 42.90 4.20
34 35 1.196104 TCCCGAGGGACCATTTTCGT 61.196 55.000 6.80 0.00 39.76 3.85
55 56 2.027561 TGGTTGCTTATCTTGTACGCCT 60.028 45.455 0.00 0.00 0.00 5.52
62 63 4.142966 GCTTATCTTGTACGCCTTTTCGTT 60.143 41.667 0.00 0.00 43.15 3.85
67 68 1.862201 TGTACGCCTTTTCGTTGAGTG 59.138 47.619 0.00 0.00 43.15 3.51
70 71 0.934496 CGCCTTTTCGTTGAGTGACA 59.066 50.000 0.00 0.00 0.00 3.58
144 145 8.818141 TGCAGATACATAGTCTAAAGTAATGC 57.182 34.615 18.00 18.00 35.53 3.56
145 146 8.421002 TGCAGATACATAGTCTAAAGTAATGCA 58.579 33.333 20.61 20.61 39.12 3.96
146 147 8.704234 GCAGATACATAGTCTAAAGTAATGCAC 58.296 37.037 18.90 0.00 35.29 4.57
152 153 9.314321 ACATAGTCTAAAGTAATGCACATACAC 57.686 33.333 12.56 3.55 0.00 2.90
154 155 9.884636 ATAGTCTAAAGTAATGCACATACACAA 57.115 29.630 12.56 0.00 0.00 3.33
155 156 8.615878 AGTCTAAAGTAATGCACATACACAAA 57.384 30.769 12.56 0.00 0.00 2.83
156 157 9.231297 AGTCTAAAGTAATGCACATACACAAAT 57.769 29.630 12.56 0.00 0.00 2.32
183 185 8.823810 ATAGTATAAGGGTAGGGATTTTTCCA 57.176 34.615 0.00 0.00 0.00 3.53
190 192 5.103643 AGGGTAGGGATTTTTCCATTAGGTC 60.104 44.000 0.00 0.00 35.89 3.85
192 194 6.062749 GGTAGGGATTTTTCCATTAGGTCTC 58.937 44.000 0.00 0.00 35.89 3.36
194 196 6.152638 AGGGATTTTTCCATTAGGTCTCAA 57.847 37.500 0.00 0.00 35.89 3.02
195 197 6.190587 AGGGATTTTTCCATTAGGTCTCAAG 58.809 40.000 0.00 0.00 35.89 3.02
273 275 9.768662 GAATATAAATTCATTTCTGCCAACCAT 57.231 29.630 0.00 0.00 41.09 3.55
276 278 6.610075 AAATTCATTTCTGCCAACCATAGT 57.390 33.333 0.00 0.00 0.00 2.12
277 279 5.841957 ATTCATTTCTGCCAACCATAGTC 57.158 39.130 0.00 0.00 0.00 2.59
287 289 4.520111 TGCCAACCATAGTCATTGATATGC 59.480 41.667 0.00 0.00 0.00 3.14
288 290 4.520111 GCCAACCATAGTCATTGATATGCA 59.480 41.667 0.00 0.00 0.00 3.96
343 349 4.041567 TCATGCAGACCAAAGAGGACTAAA 59.958 41.667 0.00 0.00 40.55 1.85
482 490 2.109304 CTCCCCAAGTCCCAAAACCTAA 59.891 50.000 0.00 0.00 0.00 2.69
614 647 1.138069 CCCTCCCACAACCAACAAAAC 59.862 52.381 0.00 0.00 0.00 2.43
615 648 2.107366 CCTCCCACAACCAACAAAACT 58.893 47.619 0.00 0.00 0.00 2.66
622 655 2.235155 ACAACCAACAAAACTTCACCCC 59.765 45.455 0.00 0.00 0.00 4.95
623 656 2.499693 CAACCAACAAAACTTCACCCCT 59.500 45.455 0.00 0.00 0.00 4.79
624 657 2.384828 ACCAACAAAACTTCACCCCTC 58.615 47.619 0.00 0.00 0.00 4.30
625 658 2.024369 ACCAACAAAACTTCACCCCTCT 60.024 45.455 0.00 0.00 0.00 3.69
626 659 2.623416 CCAACAAAACTTCACCCCTCTC 59.377 50.000 0.00 0.00 0.00 3.20
627 660 2.623416 CAACAAAACTTCACCCCTCTCC 59.377 50.000 0.00 0.00 0.00 3.71
628 661 1.850345 ACAAAACTTCACCCCTCTCCA 59.150 47.619 0.00 0.00 0.00 3.86
629 662 2.230660 CAAAACTTCACCCCTCTCCAC 58.769 52.381 0.00 0.00 0.00 4.02
630 663 0.771755 AAACTTCACCCCTCTCCACC 59.228 55.000 0.00 0.00 0.00 4.61
631 664 0.401395 AACTTCACCCCTCTCCACCA 60.401 55.000 0.00 0.00 0.00 4.17
632 665 1.128188 ACTTCACCCCTCTCCACCAC 61.128 60.000 0.00 0.00 0.00 4.16
633 666 1.842381 CTTCACCCCTCTCCACCACC 61.842 65.000 0.00 0.00 0.00 4.61
634 667 2.203998 CACCCCTCTCCACCACCT 60.204 66.667 0.00 0.00 0.00 4.00
635 668 2.203998 ACCCCTCTCCACCACCTG 60.204 66.667 0.00 0.00 0.00 4.00
636 669 2.122729 CCCCTCTCCACCACCTGA 59.877 66.667 0.00 0.00 0.00 3.86
637 670 2.294078 CCCCTCTCCACCACCTGAC 61.294 68.421 0.00 0.00 0.00 3.51
638 671 1.536418 CCCTCTCCACCACCTGACA 60.536 63.158 0.00 0.00 0.00 3.58
639 672 1.127567 CCCTCTCCACCACCTGACAA 61.128 60.000 0.00 0.00 0.00 3.18
640 673 0.322975 CCTCTCCACCACCTGACAAG 59.677 60.000 0.00 0.00 0.00 3.16
641 674 1.342074 CTCTCCACCACCTGACAAGA 58.658 55.000 0.00 0.00 0.00 3.02
642 675 1.694150 CTCTCCACCACCTGACAAGAA 59.306 52.381 0.00 0.00 0.00 2.52
643 676 1.416401 TCTCCACCACCTGACAAGAAC 59.584 52.381 0.00 0.00 0.00 3.01
644 677 0.472471 TCCACCACCTGACAAGAACC 59.528 55.000 0.00 0.00 0.00 3.62
645 678 0.182537 CCACCACCTGACAAGAACCA 59.817 55.000 0.00 0.00 0.00 3.67
646 679 1.409521 CCACCACCTGACAAGAACCAA 60.410 52.381 0.00 0.00 0.00 3.67
647 680 1.676006 CACCACCTGACAAGAACCAAC 59.324 52.381 0.00 0.00 0.00 3.77
648 681 1.283613 ACCACCTGACAAGAACCAACA 59.716 47.619 0.00 0.00 0.00 3.33
649 682 1.676006 CCACCTGACAAGAACCAACAC 59.324 52.381 0.00 0.00 0.00 3.32
650 683 1.676006 CACCTGACAAGAACCAACACC 59.324 52.381 0.00 0.00 0.00 4.16
651 684 0.944386 CCTGACAAGAACCAACACCG 59.056 55.000 0.00 0.00 0.00 4.94
652 685 0.307760 CTGACAAGAACCAACACCGC 59.692 55.000 0.00 0.00 0.00 5.68
653 686 1.098712 TGACAAGAACCAACACCGCC 61.099 55.000 0.00 0.00 0.00 6.13
654 687 0.818040 GACAAGAACCAACACCGCCT 60.818 55.000 0.00 0.00 0.00 5.52
655 688 0.818040 ACAAGAACCAACACCGCCTC 60.818 55.000 0.00 0.00 0.00 4.70
656 689 1.228154 AAGAACCAACACCGCCTCC 60.228 57.895 0.00 0.00 0.00 4.30
657 690 2.671963 GAACCAACACCGCCTCCC 60.672 66.667 0.00 0.00 0.00 4.30
658 691 4.280019 AACCAACACCGCCTCCCC 62.280 66.667 0.00 0.00 0.00 4.81
909 942 3.809905 ACTCTCCCACTTTGACTTTGAC 58.190 45.455 0.00 0.00 0.00 3.18
910 943 3.142174 CTCTCCCACTTTGACTTTGACC 58.858 50.000 0.00 0.00 0.00 4.02
911 944 2.158667 TCTCCCACTTTGACTTTGACCC 60.159 50.000 0.00 0.00 0.00 4.46
912 945 1.133606 TCCCACTTTGACTTTGACCCC 60.134 52.381 0.00 0.00 0.00 4.95
913 946 1.328279 CCACTTTGACTTTGACCCCC 58.672 55.000 0.00 0.00 0.00 5.40
914 947 0.951558 CACTTTGACTTTGACCCCCG 59.048 55.000 0.00 0.00 0.00 5.73
915 948 0.179001 ACTTTGACTTTGACCCCCGG 60.179 55.000 0.00 0.00 0.00 5.73
916 949 1.524008 CTTTGACTTTGACCCCCGGC 61.524 60.000 0.00 0.00 0.00 6.13
917 950 2.987355 TTTGACTTTGACCCCCGGCC 62.987 60.000 0.00 0.00 0.00 6.13
918 951 4.735358 GACTTTGACCCCCGGCCC 62.735 72.222 0.00 0.00 0.00 5.80
920 953 4.426313 CTTTGACCCCCGGCCCTC 62.426 72.222 0.00 0.00 0.00 4.30
931 964 4.423209 GGCCCTCACTCCCTCCCT 62.423 72.222 0.00 0.00 0.00 4.20
932 965 2.766229 GCCCTCACTCCCTCCCTC 60.766 72.222 0.00 0.00 0.00 4.30
933 966 2.041405 CCCTCACTCCCTCCCTCC 60.041 72.222 0.00 0.00 0.00 4.30
934 967 2.041405 CCTCACTCCCTCCCTCCC 60.041 72.222 0.00 0.00 0.00 4.30
935 968 2.041405 CTCACTCCCTCCCTCCCC 60.041 72.222 0.00 0.00 0.00 4.81
936 969 2.540910 TCACTCCCTCCCTCCCCT 60.541 66.667 0.00 0.00 0.00 4.79
937 970 2.366167 CACTCCCTCCCTCCCCTG 60.366 72.222 0.00 0.00 0.00 4.45
938 971 4.423209 ACTCCCTCCCTCCCCTGC 62.423 72.222 0.00 0.00 0.00 4.85
963 996 3.134127 GCCCTGCGCTAAACCCTG 61.134 66.667 9.73 0.00 0.00 4.45
964 997 3.134127 CCCTGCGCTAAACCCTGC 61.134 66.667 9.73 0.00 0.00 4.85
965 998 2.045926 CCTGCGCTAAACCCTGCT 60.046 61.111 9.73 0.00 0.00 4.24
2084 2299 4.643784 GGATTTCACAAATCTCCATCAGCT 59.356 41.667 8.50 0.00 45.17 4.24
2103 2318 2.683362 GCTAAAGGCCCTGTGTCATTAC 59.317 50.000 0.00 0.00 34.27 1.89
2165 2381 4.190772 GGTATGGTGGCATGGAATTTTTG 58.809 43.478 0.00 0.00 0.00 2.44
2213 2430 1.410083 GCATGTGCCCCTGGAGATTAA 60.410 52.381 0.00 0.00 34.31 1.40
2261 2480 2.287248 GGCTTTGAATATTCTCGGCTGC 60.287 50.000 16.24 10.98 0.00 5.25
2323 2549 1.171308 CTTTGCAGTCATGTCCTGGG 58.829 55.000 14.19 0.00 0.00 4.45
2397 2634 2.252714 GGTCCTTTTGGGGTGCAAATA 58.747 47.619 0.00 0.00 40.87 1.40
2452 2690 3.911661 ATCTGCACTTTTCAGTTCTGC 57.088 42.857 0.00 0.00 33.48 4.26
2454 2692 3.282021 TCTGCACTTTTCAGTTCTGCTT 58.718 40.909 0.00 0.00 33.48 3.91
2525 2763 3.429547 CCATACACTGCAGAGTACAGACC 60.430 52.174 23.68 0.00 38.55 3.85
2529 2767 2.028658 CACTGCAGAGTACAGACCACAT 60.029 50.000 23.35 0.00 38.55 3.21
2545 2812 7.327975 CAGACCACATATTAGGTGTGTCTTTA 58.672 38.462 20.27 0.00 44.15 1.85
2721 2993 8.107095 ACAGAGAAGAGTGAGACTAATAAGAGT 58.893 37.037 0.00 0.00 0.00 3.24
2855 5172 5.682234 TCTGCTGGAGTCATTTGATCTTA 57.318 39.130 0.00 0.00 0.00 2.10
2870 5187 8.573885 CATTTGATCTTACCTGTGATTGCATAT 58.426 33.333 0.00 0.00 0.00 1.78
2937 5255 5.353394 TCTACCTATGGTTAAGGCAACTG 57.647 43.478 0.00 0.00 41.81 3.16
3055 5377 6.392625 TGACAAGGTCATACTACTGATAGC 57.607 41.667 0.00 0.00 37.67 2.97
3056 5378 5.302059 TGACAAGGTCATACTACTGATAGCC 59.698 44.000 0.00 0.00 37.67 3.93
3058 5380 4.471078 AGGTCATACTACTGATAGCCCA 57.529 45.455 0.00 0.00 30.75 5.36
3059 5381 4.411927 AGGTCATACTACTGATAGCCCAG 58.588 47.826 0.00 0.00 39.93 4.45
3061 5383 4.153411 GTCATACTACTGATAGCCCAGGT 58.847 47.826 0.00 0.00 38.44 4.00
3062 5384 4.218852 GTCATACTACTGATAGCCCAGGTC 59.781 50.000 0.00 0.00 38.44 3.85
3063 5385 4.106502 TCATACTACTGATAGCCCAGGTCT 59.893 45.833 0.00 0.00 38.44 3.85
3065 5387 3.725634 ACTACTGATAGCCCAGGTCTTT 58.274 45.455 0.00 0.00 38.44 2.52
3066 5388 3.452627 ACTACTGATAGCCCAGGTCTTTG 59.547 47.826 0.00 0.00 38.44 2.77
3067 5389 1.561542 ACTGATAGCCCAGGTCTTTGG 59.438 52.381 0.00 0.00 38.44 3.28
3079 5521 2.904434 AGGTCTTTGGGTTCGTGTATCT 59.096 45.455 0.00 0.00 0.00 1.98
3155 5597 7.179927 TCAAATTCGACAAACATACGAGAAA 57.820 32.000 0.00 0.00 37.36 2.52
3336 6093 2.024918 CAACCGCAGCTTGTTGAGT 58.975 52.632 15.95 0.00 43.50 3.41
3394 6155 6.857964 GTGTAAGATTTGTGATGTGGTTTCAG 59.142 38.462 0.00 0.00 0.00 3.02
3813 6582 2.359850 GTGCCCTTCACCATGCGA 60.360 61.111 0.00 0.00 39.79 5.10
3963 6732 0.528017 TGATCGAGACGAAGCTGCTT 59.472 50.000 15.92 15.92 39.99 3.91
4125 6894 0.391130 TCAACGGCTTCAAGATCGGG 60.391 55.000 5.74 0.00 0.00 5.14
4128 6897 1.450312 CGGCTTCAAGATCGGGCTT 60.450 57.895 0.00 0.00 0.00 4.35
4146 6915 2.815211 GCGAGCATGTTCGAGGCA 60.815 61.111 32.33 0.00 43.03 4.75
4147 6916 2.176273 GCGAGCATGTTCGAGGCAT 61.176 57.895 32.33 0.00 43.03 4.40
4149 6918 0.027194 CGAGCATGTTCGAGGCATTG 59.973 55.000 25.55 0.00 43.03 2.82
4162 6931 1.377202 GCATTGGCCGAGTTCTCCA 60.377 57.895 0.00 0.00 0.00 3.86
4317 7089 0.390603 TGGCCGTCGGTATCAAGTTG 60.391 55.000 13.94 0.00 0.00 3.16
4320 7092 1.135199 GCCGTCGGTATCAAGTTGAGA 60.135 52.381 13.94 3.55 0.00 3.27
4369 7146 3.181497 ACATTGAGTGAGTTGTGTTGCAC 60.181 43.478 0.00 0.00 34.56 4.57
4511 7293 1.153229 GGTGGTAGGGTCGCCATTC 60.153 63.158 0.00 0.00 37.09 2.67
4512 7294 1.623542 GGTGGTAGGGTCGCCATTCT 61.624 60.000 0.00 0.00 37.09 2.40
4513 7295 0.252197 GTGGTAGGGTCGCCATTCTT 59.748 55.000 0.00 0.00 37.09 2.52
4514 7296 0.251916 TGGTAGGGTCGCCATTCTTG 59.748 55.000 0.00 0.00 0.00 3.02
4689 7471 1.375652 CTGTAGCAGCAGCAGCAGT 60.376 57.895 12.92 0.00 45.49 4.40
4690 7472 1.636570 CTGTAGCAGCAGCAGCAGTG 61.637 60.000 12.92 0.00 45.49 3.66
4691 7473 1.670406 GTAGCAGCAGCAGCAGTGT 60.670 57.895 12.92 0.00 45.49 3.55
4707 7493 1.330521 AGTGTAGTGTTTGTTGCTGCG 59.669 47.619 0.00 0.00 0.00 5.18
4793 7583 0.250513 CCTGTGAACTGTAGGGCCTC 59.749 60.000 10.74 2.12 0.00 4.70
4818 7608 0.316522 CGGATCGGAGATGCACTGAT 59.683 55.000 0.00 0.00 45.12 2.90
4819 7609 1.793258 GGATCGGAGATGCACTGATG 58.207 55.000 2.05 0.00 45.12 3.07
4820 7610 1.146637 GATCGGAGATGCACTGATGC 58.853 55.000 2.05 0.00 46.94 3.91
4821 7611 0.250209 ATCGGAGATGCACTGATGCC 60.250 55.000 0.00 0.00 46.41 4.40
4822 7612 3.888522 ATCGGAGATGCACTGATGCCG 62.889 57.143 0.00 0.00 46.41 5.69
4829 7619 3.402681 CACTGATGCCGGGGTCCT 61.403 66.667 2.18 0.00 0.00 3.85
4830 7620 3.083997 ACTGATGCCGGGGTCCTC 61.084 66.667 2.18 0.00 0.00 3.71
4831 7621 3.083349 CTGATGCCGGGGTCCTCA 61.083 66.667 2.18 0.00 0.00 3.86
4832 7622 2.609299 TGATGCCGGGGTCCTCAA 60.609 61.111 2.18 0.00 0.00 3.02
4833 7623 2.196997 CTGATGCCGGGGTCCTCAAA 62.197 60.000 2.18 0.00 0.00 2.69
4834 7624 1.749258 GATGCCGGGGTCCTCAAAC 60.749 63.158 2.18 0.00 0.00 2.93
4835 7625 3.282374 ATGCCGGGGTCCTCAAACC 62.282 63.158 2.18 0.00 38.69 3.27
4839 7629 4.735358 GGGGTCCTCAAACCGGCC 62.735 72.222 0.00 0.00 40.46 6.13
4840 7630 4.735358 GGGTCCTCAAACCGGCCC 62.735 72.222 0.00 0.00 40.46 5.80
4841 7631 3.961414 GGTCCTCAAACCGGCCCA 61.961 66.667 0.00 0.00 0.00 5.36
4842 7632 2.114411 GTCCTCAAACCGGCCCAA 59.886 61.111 0.00 0.00 0.00 4.12
4843 7633 1.304134 GTCCTCAAACCGGCCCAAT 60.304 57.895 0.00 0.00 0.00 3.16
4844 7634 0.034863 GTCCTCAAACCGGCCCAATA 60.035 55.000 0.00 0.00 0.00 1.90
4845 7635 0.923358 TCCTCAAACCGGCCCAATAT 59.077 50.000 0.00 0.00 0.00 1.28
4846 7636 1.032014 CCTCAAACCGGCCCAATATG 58.968 55.000 0.00 0.00 0.00 1.78
4847 7637 1.684869 CCTCAAACCGGCCCAATATGT 60.685 52.381 0.00 0.00 0.00 2.29
4848 7638 1.676006 CTCAAACCGGCCCAATATGTC 59.324 52.381 0.00 0.00 0.00 3.06
4849 7639 0.744281 CAAACCGGCCCAATATGTCC 59.256 55.000 0.00 0.00 0.00 4.02
4850 7640 0.750182 AAACCGGCCCAATATGTCCG 60.750 55.000 0.00 0.00 41.41 4.79
4852 7642 2.825982 CGGCCCAATATGTCCGGA 59.174 61.111 0.00 0.00 38.35 5.14
4853 7643 1.597027 CGGCCCAATATGTCCGGAC 60.597 63.158 28.17 28.17 38.35 4.79
4854 7644 1.837090 GGCCCAATATGTCCGGACT 59.163 57.895 33.39 21.29 0.00 3.85
4855 7645 0.535102 GGCCCAATATGTCCGGACTG 60.535 60.000 33.39 22.91 0.00 3.51
4856 7646 0.468226 GCCCAATATGTCCGGACTGA 59.532 55.000 33.39 21.87 0.00 3.41
4857 7647 1.072331 GCCCAATATGTCCGGACTGAT 59.928 52.381 33.39 23.04 0.00 2.90
4858 7648 2.872038 GCCCAATATGTCCGGACTGATC 60.872 54.545 33.39 14.59 0.00 2.92
4859 7649 2.368548 CCCAATATGTCCGGACTGATCA 59.631 50.000 33.39 15.12 0.00 2.92
4860 7650 3.555795 CCCAATATGTCCGGACTGATCAG 60.556 52.174 33.39 21.37 0.00 2.90
4861 7651 3.062763 CAATATGTCCGGACTGATCAGC 58.937 50.000 33.39 14.64 0.00 4.26
4862 7652 1.775385 TATGTCCGGACTGATCAGCA 58.225 50.000 33.39 12.79 0.00 4.41
4863 7653 0.176680 ATGTCCGGACTGATCAGCAC 59.823 55.000 33.39 16.01 0.00 4.40
4864 7654 1.153549 GTCCGGACTGATCAGCACC 60.154 63.158 27.64 22.44 0.00 5.01
4865 7655 1.305297 TCCGGACTGATCAGCACCT 60.305 57.895 26.26 9.92 0.00 4.00
4866 7656 1.153489 CCGGACTGATCAGCACCTG 60.153 63.158 26.26 20.12 0.00 4.00
4867 7657 1.593787 CGGACTGATCAGCACCTGT 59.406 57.895 26.26 9.67 32.61 4.00
4868 7658 0.459237 CGGACTGATCAGCACCTGTC 60.459 60.000 26.26 16.23 32.61 3.51
4869 7659 0.610174 GGACTGATCAGCACCTGTCA 59.390 55.000 22.83 0.00 34.32 3.58
4870 7660 1.209019 GGACTGATCAGCACCTGTCAT 59.791 52.381 22.83 0.00 34.32 3.06
4871 7661 2.277969 GACTGATCAGCACCTGTCATG 58.722 52.381 22.83 0.00 33.33 3.07
4872 7662 1.627329 ACTGATCAGCACCTGTCATGT 59.373 47.619 22.83 0.00 32.61 3.21
4873 7663 2.007608 CTGATCAGCACCTGTCATGTG 58.992 52.381 10.38 4.03 36.79 3.21
4874 7664 1.339342 TGATCAGCACCTGTCATGTGG 60.339 52.381 9.88 0.00 34.27 4.17
4875 7665 0.034767 ATCAGCACCTGTCATGTGGG 60.035 55.000 9.88 0.00 34.27 4.61
4876 7666 1.676635 CAGCACCTGTCATGTGGGG 60.677 63.158 9.88 0.00 34.27 4.96
4877 7667 3.064324 GCACCTGTCATGTGGGGC 61.064 66.667 12.05 12.05 46.09 5.80
4878 7668 2.361610 CACCTGTCATGTGGGGCC 60.362 66.667 0.00 0.00 0.00 5.80
4879 7669 2.858476 ACCTGTCATGTGGGGCCA 60.858 61.111 4.39 0.00 0.00 5.36
4880 7670 2.044650 CCTGTCATGTGGGGCCAG 60.045 66.667 4.39 0.00 0.00 4.85
4881 7671 2.753043 CTGTCATGTGGGGCCAGC 60.753 66.667 4.39 0.00 0.00 4.85
4882 7672 4.365111 TGTCATGTGGGGCCAGCC 62.365 66.667 4.39 0.00 0.00 4.85
4899 7689 2.754648 CCCTATAGGCGTAAGGGCA 58.245 57.895 13.85 0.00 43.47 5.36
4900 7690 1.276622 CCCTATAGGCGTAAGGGCAT 58.723 55.000 13.85 0.00 43.47 4.40
4901 7691 1.066143 CCCTATAGGCGTAAGGGCATG 60.066 57.143 13.85 0.00 43.47 4.06
4902 7692 1.623811 CCTATAGGCGTAAGGGCATGT 59.376 52.381 5.67 0.00 45.36 3.21
4903 7693 2.829720 CCTATAGGCGTAAGGGCATGTA 59.170 50.000 5.67 0.00 45.36 2.29
4904 7694 2.833631 ATAGGCGTAAGGGCATGTAC 57.166 50.000 0.00 0.00 45.36 2.90
4905 7695 1.487300 TAGGCGTAAGGGCATGTACA 58.513 50.000 0.00 0.00 45.36 2.90
4906 7696 0.616371 AGGCGTAAGGGCATGTACAA 59.384 50.000 0.00 0.00 45.36 2.41
4907 7697 1.211949 AGGCGTAAGGGCATGTACAAT 59.788 47.619 0.00 0.00 45.36 2.71
4908 7698 1.333619 GGCGTAAGGGCATGTACAATG 59.666 52.381 0.00 0.12 41.77 2.82
4909 7699 2.014128 GCGTAAGGGCATGTACAATGT 58.986 47.619 0.00 0.00 38.28 2.71
4910 7700 3.199677 GCGTAAGGGCATGTACAATGTA 58.800 45.455 0.00 0.00 38.28 2.29
4911 7701 3.001939 GCGTAAGGGCATGTACAATGTAC 59.998 47.826 16.05 16.05 38.28 2.90
4912 7702 4.185394 CGTAAGGGCATGTACAATGTACA 58.815 43.478 25.91 25.91 0.00 2.90
4913 7703 4.632251 CGTAAGGGCATGTACAATGTACAA 59.368 41.667 27.16 12.94 0.00 2.41
4914 7704 5.295787 CGTAAGGGCATGTACAATGTACAAT 59.704 40.000 27.16 14.45 0.00 2.71
4915 7705 5.581126 AAGGGCATGTACAATGTACAATG 57.419 39.130 27.16 23.42 0.00 2.82
4916 7706 4.854173 AGGGCATGTACAATGTACAATGA 58.146 39.130 27.16 7.01 0.00 2.57
4917 7707 5.448654 AGGGCATGTACAATGTACAATGAT 58.551 37.500 27.16 10.53 0.00 2.45
4918 7708 5.532406 AGGGCATGTACAATGTACAATGATC 59.468 40.000 27.16 18.58 0.00 2.92
4919 7709 5.443261 GGCATGTACAATGTACAATGATCG 58.557 41.667 27.16 13.72 0.00 3.69
4920 7710 5.236263 GGCATGTACAATGTACAATGATCGA 59.764 40.000 27.16 4.52 0.00 3.59
4921 7711 6.073058 GGCATGTACAATGTACAATGATCGAT 60.073 38.462 27.16 8.09 0.00 3.59
4922 7712 7.117667 GGCATGTACAATGTACAATGATCGATA 59.882 37.037 27.16 3.12 0.00 2.92
4923 7713 8.495148 GCATGTACAATGTACAATGATCGATAA 58.505 33.333 27.16 2.63 0.00 1.75
4925 7715 9.981114 ATGTACAATGTACAATGATCGATAAGA 57.019 29.630 27.16 2.01 0.00 2.10
4926 7716 9.981114 TGTACAATGTACAATGATCGATAAGAT 57.019 29.630 22.36 0.00 43.51 2.40
4965 7755 8.969260 ATCTTGCATGTAATTAAGAGATGACA 57.031 30.769 0.00 0.00 32.52 3.58
4966 7756 8.791327 TCTTGCATGTAATTAAGAGATGACAA 57.209 30.769 0.00 5.06 0.00 3.18
4967 7757 8.886719 TCTTGCATGTAATTAAGAGATGACAAG 58.113 33.333 16.97 16.97 33.84 3.16
4968 7758 8.791327 TTGCATGTAATTAAGAGATGACAAGA 57.209 30.769 0.00 0.00 0.00 3.02
4969 7759 8.791327 TGCATGTAATTAAGAGATGACAAGAA 57.209 30.769 0.00 0.00 0.00 2.52
4970 7760 9.230122 TGCATGTAATTAAGAGATGACAAGAAA 57.770 29.630 0.00 0.00 0.00 2.52
5037 7827 8.761575 ATTAGTTATTCCTAAAAACGTGACGA 57.238 30.769 13.70 0.00 31.09 4.20
5038 7828 6.701432 AGTTATTCCTAAAAACGTGACGAG 57.299 37.500 13.70 0.00 0.00 4.18
5039 7829 6.449698 AGTTATTCCTAAAAACGTGACGAGA 58.550 36.000 13.70 0.00 0.00 4.04
5040 7830 6.364435 AGTTATTCCTAAAAACGTGACGAGAC 59.636 38.462 13.70 0.00 0.00 3.36
5041 7831 3.713858 TCCTAAAAACGTGACGAGACA 57.286 42.857 13.70 0.00 0.00 3.41
5042 7832 4.247267 TCCTAAAAACGTGACGAGACAT 57.753 40.909 13.70 0.00 0.00 3.06
5043 7833 5.375417 TCCTAAAAACGTGACGAGACATA 57.625 39.130 13.70 0.00 0.00 2.29
5044 7834 5.957798 TCCTAAAAACGTGACGAGACATAT 58.042 37.500 13.70 0.00 0.00 1.78
5045 7835 6.392354 TCCTAAAAACGTGACGAGACATATT 58.608 36.000 13.70 0.00 0.00 1.28
5046 7836 6.309494 TCCTAAAAACGTGACGAGACATATTG 59.691 38.462 13.70 0.00 0.00 1.90
5047 7837 5.917541 AAAAACGTGACGAGACATATTGT 57.082 34.783 13.70 0.00 0.00 2.71
5048 7838 4.903638 AAACGTGACGAGACATATTGTG 57.096 40.909 13.70 0.00 0.00 3.33
5049 7839 2.259618 ACGTGACGAGACATATTGTGC 58.740 47.619 13.70 0.00 0.00 4.57
5050 7840 2.094700 ACGTGACGAGACATATTGTGCT 60.095 45.455 13.70 0.00 0.00 4.40
5051 7841 3.128068 ACGTGACGAGACATATTGTGCTA 59.872 43.478 13.70 0.00 0.00 3.49
5052 7842 4.102649 CGTGACGAGACATATTGTGCTAA 58.897 43.478 0.00 0.00 0.00 3.09
5053 7843 4.205181 CGTGACGAGACATATTGTGCTAAG 59.795 45.833 0.00 0.00 0.00 2.18
5054 7844 5.340803 GTGACGAGACATATTGTGCTAAGA 58.659 41.667 0.00 0.00 0.00 2.10
5055 7845 5.457148 GTGACGAGACATATTGTGCTAAGAG 59.543 44.000 0.00 0.00 0.00 2.85
5056 7846 5.357032 TGACGAGACATATTGTGCTAAGAGA 59.643 40.000 0.00 0.00 0.00 3.10
5057 7847 6.039829 TGACGAGACATATTGTGCTAAGAGAT 59.960 38.462 0.00 0.00 0.00 2.75
5058 7848 6.442952 ACGAGACATATTGTGCTAAGAGATC 58.557 40.000 0.00 0.00 0.00 2.75
5059 7849 6.039829 ACGAGACATATTGTGCTAAGAGATCA 59.960 38.462 0.00 0.00 0.00 2.92
5060 7850 7.089538 CGAGACATATTGTGCTAAGAGATCAT 58.910 38.462 0.00 0.00 0.00 2.45
5061 7851 7.273164 CGAGACATATTGTGCTAAGAGATCATC 59.727 40.741 0.00 0.00 0.00 2.92
5062 7852 8.192743 AGACATATTGTGCTAAGAGATCATCT 57.807 34.615 0.00 0.00 41.27 2.90
5063 7853 8.306038 AGACATATTGTGCTAAGAGATCATCTC 58.694 37.037 6.55 6.55 43.70 2.75
5095 7885 6.067217 TCTTAAATAAGAGAAGGCAAGCCT 57.933 37.500 8.02 8.02 41.71 4.58
5096 7886 6.485171 TCTTAAATAAGAGAAGGCAAGCCTT 58.515 36.000 25.32 25.32 46.09 4.35
5097 7887 6.948309 TCTTAAATAAGAGAAGGCAAGCCTTT 59.052 34.615 25.72 15.91 44.89 3.11
5098 7888 7.451566 TCTTAAATAAGAGAAGGCAAGCCTTTT 59.548 33.333 25.72 20.83 44.89 2.27
5105 7895 2.561478 AGGCAAGCCTTTTCTTACGA 57.439 45.000 8.02 0.00 45.70 3.43
5106 7896 2.427506 AGGCAAGCCTTTTCTTACGAG 58.572 47.619 8.02 0.00 45.70 4.18
5107 7897 2.152016 GGCAAGCCTTTTCTTACGAGT 58.848 47.619 3.29 0.00 0.00 4.18
5108 7898 2.552743 GGCAAGCCTTTTCTTACGAGTT 59.447 45.455 3.29 0.00 0.00 3.01
5109 7899 3.365064 GGCAAGCCTTTTCTTACGAGTTC 60.365 47.826 3.29 0.00 0.00 3.01
5110 7900 3.498777 GCAAGCCTTTTCTTACGAGTTCT 59.501 43.478 0.00 0.00 0.00 3.01
5111 7901 4.377533 GCAAGCCTTTTCTTACGAGTTCTC 60.378 45.833 0.00 0.00 0.00 2.87
5112 7902 4.875561 AGCCTTTTCTTACGAGTTCTCT 57.124 40.909 0.00 0.00 0.00 3.10
5113 7903 4.811908 AGCCTTTTCTTACGAGTTCTCTC 58.188 43.478 0.00 0.00 37.35 3.20
5114 7904 4.525100 AGCCTTTTCTTACGAGTTCTCTCT 59.475 41.667 0.00 0.00 38.45 3.10
5115 7905 4.860352 GCCTTTTCTTACGAGTTCTCTCTC 59.140 45.833 0.00 0.00 38.45 3.20
5116 7906 5.404096 CCTTTTCTTACGAGTTCTCTCTCC 58.596 45.833 0.00 0.00 38.45 3.71
5117 7907 5.184287 CCTTTTCTTACGAGTTCTCTCTCCT 59.816 44.000 0.00 0.00 38.45 3.69
5118 7908 5.883503 TTTCTTACGAGTTCTCTCTCCTC 57.116 43.478 0.00 0.00 38.45 3.71
5119 7909 3.876341 TCTTACGAGTTCTCTCTCCTCC 58.124 50.000 0.00 0.00 38.45 4.30
5120 7910 3.263681 TCTTACGAGTTCTCTCTCCTCCA 59.736 47.826 0.00 0.00 38.45 3.86
5121 7911 1.828979 ACGAGTTCTCTCTCCTCCAC 58.171 55.000 0.00 0.00 38.45 4.02
5122 7912 1.099689 CGAGTTCTCTCTCCTCCACC 58.900 60.000 0.00 0.00 38.45 4.61
5123 7913 1.340600 CGAGTTCTCTCTCCTCCACCT 60.341 57.143 0.00 0.00 38.45 4.00
5124 7914 2.375146 GAGTTCTCTCTCCTCCACCTC 58.625 57.143 0.00 0.00 37.68 3.85
5125 7915 1.713647 AGTTCTCTCTCCTCCACCTCA 59.286 52.381 0.00 0.00 0.00 3.86
5126 7916 2.314549 AGTTCTCTCTCCTCCACCTCAT 59.685 50.000 0.00 0.00 0.00 2.90
5127 7917 2.693074 GTTCTCTCTCCTCCACCTCATC 59.307 54.545 0.00 0.00 0.00 2.92
5128 7918 1.925959 TCTCTCTCCTCCACCTCATCA 59.074 52.381 0.00 0.00 0.00 3.07
5129 7919 2.517553 TCTCTCTCCTCCACCTCATCAT 59.482 50.000 0.00 0.00 0.00 2.45
5130 7920 3.052262 TCTCTCTCCTCCACCTCATCATT 60.052 47.826 0.00 0.00 0.00 2.57
5131 7921 3.710677 CTCTCTCCTCCACCTCATCATTT 59.289 47.826 0.00 0.00 0.00 2.32
5132 7922 4.883759 TCTCTCCTCCACCTCATCATTTA 58.116 43.478 0.00 0.00 0.00 1.40
5133 7923 5.471424 TCTCTCCTCCACCTCATCATTTAT 58.529 41.667 0.00 0.00 0.00 1.40
5134 7924 5.541868 TCTCTCCTCCACCTCATCATTTATC 59.458 44.000 0.00 0.00 0.00 1.75
5135 7925 4.594920 TCTCCTCCACCTCATCATTTATCC 59.405 45.833 0.00 0.00 0.00 2.59
5136 7926 4.570926 TCCTCCACCTCATCATTTATCCT 58.429 43.478 0.00 0.00 0.00 3.24
5137 7927 5.726560 TCCTCCACCTCATCATTTATCCTA 58.273 41.667 0.00 0.00 0.00 2.94
5138 7928 6.334296 TCCTCCACCTCATCATTTATCCTAT 58.666 40.000 0.00 0.00 0.00 2.57
5139 7929 6.214208 TCCTCCACCTCATCATTTATCCTATG 59.786 42.308 0.00 0.00 0.00 2.23
5140 7930 6.013032 CCTCCACCTCATCATTTATCCTATGT 60.013 42.308 0.00 0.00 0.00 2.29
5141 7931 6.772605 TCCACCTCATCATTTATCCTATGTG 58.227 40.000 0.00 0.00 0.00 3.21
5142 7932 6.329986 TCCACCTCATCATTTATCCTATGTGT 59.670 38.462 0.00 0.00 0.00 3.72
5143 7933 6.652481 CCACCTCATCATTTATCCTATGTGTC 59.348 42.308 0.00 0.00 0.00 3.67
5144 7934 7.219322 CACCTCATCATTTATCCTATGTGTCA 58.781 38.462 0.00 0.00 0.00 3.58
5145 7935 7.172190 CACCTCATCATTTATCCTATGTGTCAC 59.828 40.741 0.00 0.00 0.00 3.67
5146 7936 7.071698 ACCTCATCATTTATCCTATGTGTCACT 59.928 37.037 4.27 0.00 0.00 3.41
5147 7937 7.601886 CCTCATCATTTATCCTATGTGTCACTC 59.398 40.741 4.27 0.00 0.00 3.51
5148 7938 7.445121 TCATCATTTATCCTATGTGTCACTCC 58.555 38.462 4.27 0.00 0.00 3.85
5149 7939 7.290948 TCATCATTTATCCTATGTGTCACTCCT 59.709 37.037 4.27 0.00 0.00 3.69
5150 7940 8.588472 CATCATTTATCCTATGTGTCACTCCTA 58.412 37.037 4.27 0.00 0.00 2.94
5151 7941 8.547481 TCATTTATCCTATGTGTCACTCCTAA 57.453 34.615 4.27 0.00 0.00 2.69
5152 7942 8.642432 TCATTTATCCTATGTGTCACTCCTAAG 58.358 37.037 4.27 0.00 0.00 2.18
5153 7943 8.642432 CATTTATCCTATGTGTCACTCCTAAGA 58.358 37.037 4.27 0.00 0.00 2.10
5154 7944 8.783660 TTTATCCTATGTGTCACTCCTAAGAT 57.216 34.615 4.27 2.53 0.00 2.40
5155 7945 9.877222 TTTATCCTATGTGTCACTCCTAAGATA 57.123 33.333 4.27 1.67 0.00 1.98
5156 7946 9.521841 TTATCCTATGTGTCACTCCTAAGATAG 57.478 37.037 4.27 1.50 0.00 2.08
5157 7947 5.770663 TCCTATGTGTCACTCCTAAGATAGC 59.229 44.000 4.27 0.00 0.00 2.97
5158 7948 5.536538 CCTATGTGTCACTCCTAAGATAGCA 59.463 44.000 4.27 0.00 0.00 3.49
5159 7949 4.720649 TGTGTCACTCCTAAGATAGCAC 57.279 45.455 4.27 0.00 0.00 4.40
5160 7950 3.447586 TGTGTCACTCCTAAGATAGCACC 59.552 47.826 4.27 0.00 0.00 5.01
5161 7951 3.447586 GTGTCACTCCTAAGATAGCACCA 59.552 47.826 0.00 0.00 0.00 4.17
5162 7952 4.100189 GTGTCACTCCTAAGATAGCACCAT 59.900 45.833 0.00 0.00 0.00 3.55
5163 7953 4.716784 TGTCACTCCTAAGATAGCACCATT 59.283 41.667 0.00 0.00 0.00 3.16
5164 7954 5.053145 GTCACTCCTAAGATAGCACCATTG 58.947 45.833 0.00 0.00 0.00 2.82
5165 7955 4.716784 TCACTCCTAAGATAGCACCATTGT 59.283 41.667 0.00 0.00 0.00 2.71
5166 7956 5.897250 TCACTCCTAAGATAGCACCATTGTA 59.103 40.000 0.00 0.00 0.00 2.41
5167 7957 5.986135 CACTCCTAAGATAGCACCATTGTAC 59.014 44.000 0.00 0.00 0.00 2.90
5168 7958 5.661312 ACTCCTAAGATAGCACCATTGTACA 59.339 40.000 0.00 0.00 0.00 2.90
5169 7959 6.327626 ACTCCTAAGATAGCACCATTGTACAT 59.672 38.462 0.00 0.00 0.00 2.29
5170 7960 6.524734 TCCTAAGATAGCACCATTGTACATG 58.475 40.000 0.00 0.00 0.00 3.21
5171 7961 5.180117 CCTAAGATAGCACCATTGTACATGC 59.820 44.000 10.53 10.53 38.39 4.06
5172 7962 3.480470 AGATAGCACCATTGTACATGCC 58.520 45.455 14.08 1.71 38.92 4.40
5173 7963 2.051334 TAGCACCATTGTACATGCCC 57.949 50.000 14.08 0.00 38.92 5.36
5174 7964 0.332632 AGCACCATTGTACATGCCCT 59.667 50.000 14.08 0.00 38.92 5.19
5175 7965 1.563879 AGCACCATTGTACATGCCCTA 59.436 47.619 14.08 0.00 38.92 3.53
5176 7966 2.025416 AGCACCATTGTACATGCCCTAA 60.025 45.455 14.08 0.00 38.92 2.69
5177 7967 2.358898 GCACCATTGTACATGCCCTAAG 59.641 50.000 7.77 0.00 31.71 2.18
5178 7968 2.951642 CACCATTGTACATGCCCTAAGG 59.048 50.000 0.00 0.00 0.00 2.69
5189 7979 2.584608 CCTAAGGGACCTGCACGG 59.415 66.667 0.00 1.16 39.35 4.94
5190 7980 2.584608 CTAAGGGACCTGCACGGG 59.415 66.667 7.06 0.00 36.97 5.28
5191 7981 3.682292 CTAAGGGACCTGCACGGGC 62.682 68.421 0.34 0.34 41.67 6.13
5210 8000 4.047125 GGCCCTGCACCTGCCTAA 62.047 66.667 8.73 0.00 42.01 2.69
5211 8001 2.035626 GCCCTGCACCTGCCTAAA 59.964 61.111 0.00 0.00 41.18 1.85
5212 8002 2.048603 GCCCTGCACCTGCCTAAAG 61.049 63.158 0.00 0.00 41.18 1.85
5213 8003 1.685224 CCCTGCACCTGCCTAAAGA 59.315 57.895 0.00 0.00 41.18 2.52
5214 8004 0.257039 CCCTGCACCTGCCTAAAGAT 59.743 55.000 0.00 0.00 41.18 2.40
5215 8005 1.490490 CCCTGCACCTGCCTAAAGATA 59.510 52.381 0.00 0.00 41.18 1.98
5216 8006 2.107204 CCCTGCACCTGCCTAAAGATAT 59.893 50.000 0.00 0.00 41.18 1.63
5217 8007 3.144506 CCTGCACCTGCCTAAAGATATG 58.855 50.000 0.00 0.00 41.18 1.78
5218 8008 3.434167 CCTGCACCTGCCTAAAGATATGT 60.434 47.826 0.00 0.00 41.18 2.29
5219 8009 3.808728 TGCACCTGCCTAAAGATATGTC 58.191 45.455 0.00 0.00 41.18 3.06
5220 8010 3.142174 GCACCTGCCTAAAGATATGTCC 58.858 50.000 0.00 0.00 34.31 4.02
5221 8011 3.181450 GCACCTGCCTAAAGATATGTCCT 60.181 47.826 0.00 0.00 34.31 3.85
5222 8012 4.040461 GCACCTGCCTAAAGATATGTCCTA 59.960 45.833 0.00 0.00 34.31 2.94
5223 8013 5.542779 CACCTGCCTAAAGATATGTCCTAC 58.457 45.833 0.00 0.00 0.00 3.18
5224 8014 5.305644 CACCTGCCTAAAGATATGTCCTACT 59.694 44.000 0.00 0.00 0.00 2.57
5225 8015 5.905913 ACCTGCCTAAAGATATGTCCTACTT 59.094 40.000 0.00 0.00 0.00 2.24
5226 8016 6.387220 ACCTGCCTAAAGATATGTCCTACTTT 59.613 38.462 0.00 0.00 36.68 2.66
5227 8017 7.567622 ACCTGCCTAAAGATATGTCCTACTTTA 59.432 37.037 0.00 0.00 34.93 1.85
5228 8018 8.429641 CCTGCCTAAAGATATGTCCTACTTTAA 58.570 37.037 0.00 0.00 35.43 1.52
5256 8046 7.616313 ACAGTCTTTTTAGATTAGGAGTCTGG 58.384 38.462 0.00 0.00 0.00 3.86
5257 8047 7.044798 CAGTCTTTTTAGATTAGGAGTCTGGG 58.955 42.308 0.00 0.00 0.00 4.45
5258 8048 6.731448 AGTCTTTTTAGATTAGGAGTCTGGGT 59.269 38.462 0.00 0.00 0.00 4.51
5259 8049 7.899709 AGTCTTTTTAGATTAGGAGTCTGGGTA 59.100 37.037 0.00 0.00 0.00 3.69
5260 8050 8.706521 GTCTTTTTAGATTAGGAGTCTGGGTAT 58.293 37.037 0.00 0.00 0.00 2.73
5261 8051 9.280456 TCTTTTTAGATTAGGAGTCTGGGTATT 57.720 33.333 0.00 0.00 0.00 1.89
5264 8054 9.725206 TTTTAGATTAGGAGTCTGGGTATTAGT 57.275 33.333 0.00 0.00 0.00 2.24
5265 8055 9.725206 TTTAGATTAGGAGTCTGGGTATTAGTT 57.275 33.333 0.00 0.00 0.00 2.24
5266 8056 7.604657 AGATTAGGAGTCTGGGTATTAGTTG 57.395 40.000 0.00 0.00 0.00 3.16
5267 8057 6.555360 AGATTAGGAGTCTGGGTATTAGTTGG 59.445 42.308 0.00 0.00 0.00 3.77
5268 8058 4.348020 AGGAGTCTGGGTATTAGTTGGA 57.652 45.455 0.00 0.00 0.00 3.53
5269 8059 4.695606 AGGAGTCTGGGTATTAGTTGGAA 58.304 43.478 0.00 0.00 0.00 3.53
5270 8060 5.098663 AGGAGTCTGGGTATTAGTTGGAAA 58.901 41.667 0.00 0.00 0.00 3.13
5271 8061 5.189934 AGGAGTCTGGGTATTAGTTGGAAAG 59.810 44.000 0.00 0.00 0.00 2.62
5272 8062 5.429130 GAGTCTGGGTATTAGTTGGAAAGG 58.571 45.833 0.00 0.00 0.00 3.11
5273 8063 4.850386 AGTCTGGGTATTAGTTGGAAAGGT 59.150 41.667 0.00 0.00 0.00 3.50
5274 8064 5.312443 AGTCTGGGTATTAGTTGGAAAGGTT 59.688 40.000 0.00 0.00 0.00 3.50
5275 8065 6.008331 GTCTGGGTATTAGTTGGAAAGGTTT 58.992 40.000 0.00 0.00 0.00 3.27
5276 8066 7.017850 AGTCTGGGTATTAGTTGGAAAGGTTTA 59.982 37.037 0.00 0.00 0.00 2.01
5277 8067 7.336176 GTCTGGGTATTAGTTGGAAAGGTTTAG 59.664 40.741 0.00 0.00 0.00 1.85
5278 8068 7.017850 TCTGGGTATTAGTTGGAAAGGTTTAGT 59.982 37.037 0.00 0.00 0.00 2.24
5279 8069 7.170277 TGGGTATTAGTTGGAAAGGTTTAGTC 58.830 38.462 0.00 0.00 0.00 2.59
5280 8070 6.600822 GGGTATTAGTTGGAAAGGTTTAGTCC 59.399 42.308 0.00 0.00 0.00 3.85
5281 8071 6.600822 GGTATTAGTTGGAAAGGTTTAGTCCC 59.399 42.308 0.00 0.00 0.00 4.46
5282 8072 3.136009 AGTTGGAAAGGTTTAGTCCCG 57.864 47.619 0.00 0.00 0.00 5.14
5283 8073 2.707257 AGTTGGAAAGGTTTAGTCCCGA 59.293 45.455 0.00 0.00 0.00 5.14
5284 8074 3.136992 AGTTGGAAAGGTTTAGTCCCGAA 59.863 43.478 0.00 0.00 0.00 4.30
5285 8075 3.412237 TGGAAAGGTTTAGTCCCGAAG 57.588 47.619 0.00 0.00 0.00 3.79
5286 8076 2.974099 TGGAAAGGTTTAGTCCCGAAGA 59.026 45.455 0.00 0.00 0.00 2.87
5287 8077 3.391955 TGGAAAGGTTTAGTCCCGAAGAA 59.608 43.478 0.00 0.00 0.00 2.52
5288 8078 4.001652 GGAAAGGTTTAGTCCCGAAGAAG 58.998 47.826 0.00 0.00 0.00 2.85
5289 8079 3.697619 AAGGTTTAGTCCCGAAGAAGG 57.302 47.619 0.00 0.00 0.00 3.46
5290 8080 2.617658 AGGTTTAGTCCCGAAGAAGGT 58.382 47.619 0.00 0.00 0.00 3.50
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 0.031857 CGGGACATTGCTTGCAACAA 59.968 50.000 10.37 14.09 0.00 2.83
1 2 0.821301 TCGGGACATTGCTTGCAACA 60.821 50.000 10.37 0.00 0.00 3.33
3 4 1.243342 CCTCGGGACATTGCTTGCAA 61.243 55.000 10.57 10.57 0.00 4.08
4 5 1.675310 CCTCGGGACATTGCTTGCA 60.675 57.895 0.00 0.00 0.00 4.08
5 6 2.409870 CCCTCGGGACATTGCTTGC 61.410 63.158 0.00 0.00 37.50 4.01
7 8 3.820425 TCCCTCGGGACATTGCTT 58.180 55.556 0.00 0.00 39.76 3.91
15 16 1.196104 ACGAAAATGGTCCCTCGGGA 61.196 55.000 0.00 0.00 42.90 5.14
16 17 1.024579 CACGAAAATGGTCCCTCGGG 61.025 60.000 0.00 0.00 35.64 5.14
17 18 1.024579 CCACGAAAATGGTCCCTCGG 61.025 60.000 0.00 0.00 35.64 4.63
18 19 2.466867 CCACGAAAATGGTCCCTCG 58.533 57.895 0.00 0.00 34.77 4.63
25 26 4.701956 AGATAAGCAACCACGAAAATGG 57.298 40.909 0.00 0.00 46.10 3.16
26 27 5.460646 ACAAGATAAGCAACCACGAAAATG 58.539 37.500 0.00 0.00 0.00 2.32
27 28 5.705609 ACAAGATAAGCAACCACGAAAAT 57.294 34.783 0.00 0.00 0.00 1.82
28 29 5.333492 CGTACAAGATAAGCAACCACGAAAA 60.333 40.000 0.00 0.00 0.00 2.29
32 33 2.222729 GCGTACAAGATAAGCAACCACG 60.223 50.000 0.00 0.00 0.00 4.94
34 35 2.027561 AGGCGTACAAGATAAGCAACCA 60.028 45.455 0.00 0.00 0.00 3.67
55 56 3.991121 TCGCATATGTCACTCAACGAAAA 59.009 39.130 4.29 0.00 0.00 2.29
62 63 1.204467 TGCACTCGCATATGTCACTCA 59.796 47.619 4.29 0.00 45.36 3.41
149 150 9.678981 TCCCTACCCTTATACTATAATTTGTGT 57.321 33.333 0.00 0.00 0.00 3.72
159 160 8.823810 ATGGAAAAATCCCTACCCTTATACTA 57.176 34.615 0.00 0.00 0.00 1.82
160 161 7.723109 ATGGAAAAATCCCTACCCTTATACT 57.277 36.000 0.00 0.00 0.00 2.12
161 162 9.516546 CTAATGGAAAAATCCCTACCCTTATAC 57.483 37.037 0.00 0.00 0.00 1.47
163 164 7.132016 ACCTAATGGAAAAATCCCTACCCTTAT 59.868 37.037 0.00 0.00 37.04 1.73
164 165 6.452330 ACCTAATGGAAAAATCCCTACCCTTA 59.548 38.462 0.00 0.00 37.04 2.69
208 210 9.143631 GGTTCATATCCTTCACATTTCAAAAAG 57.856 33.333 0.00 0.00 0.00 2.27
209 211 8.646004 TGGTTCATATCCTTCACATTTCAAAAA 58.354 29.630 0.00 0.00 0.00 1.94
210 212 8.187913 TGGTTCATATCCTTCACATTTCAAAA 57.812 30.769 0.00 0.00 0.00 2.44
221 223 8.519799 TTTTGTAGGATTGGTTCATATCCTTC 57.480 34.615 8.77 5.14 46.64 3.46
246 248 8.980596 TGGTTGGCAGAAATGAATTTATATTCT 58.019 29.630 7.32 3.46 40.68 2.40
252 254 7.395772 TGACTATGGTTGGCAGAAATGAATTTA 59.604 33.333 0.00 0.00 0.00 1.40
253 255 6.211184 TGACTATGGTTGGCAGAAATGAATTT 59.789 34.615 0.00 0.00 0.00 1.82
256 258 4.661222 TGACTATGGTTGGCAGAAATGAA 58.339 39.130 0.00 0.00 0.00 2.57
257 259 4.299586 TGACTATGGTTGGCAGAAATGA 57.700 40.909 0.00 0.00 0.00 2.57
263 265 5.335426 GCATATCAATGACTATGGTTGGCAG 60.335 44.000 11.67 0.00 34.84 4.85
265 267 4.520111 TGCATATCAATGACTATGGTTGGC 59.480 41.667 11.67 0.00 34.84 4.52
267 269 9.537192 AAAAATGCATATCAATGACTATGGTTG 57.463 29.630 0.00 0.00 34.84 3.77
299 301 9.683069 GCATGAATTTCGTAGGATATGATTTTT 57.317 29.630 0.00 0.00 36.31 1.94
300 302 8.849168 TGCATGAATTTCGTAGGATATGATTTT 58.151 29.630 0.00 0.00 36.31 1.82
302 304 7.879677 TCTGCATGAATTTCGTAGGATATGATT 59.120 33.333 0.00 0.00 36.31 2.57
303 305 7.332926 GTCTGCATGAATTTCGTAGGATATGAT 59.667 37.037 0.00 0.00 36.31 2.45
304 306 6.646653 GTCTGCATGAATTTCGTAGGATATGA 59.353 38.462 0.00 0.00 34.12 2.15
305 307 6.128445 GGTCTGCATGAATTTCGTAGGATATG 60.128 42.308 0.00 0.00 0.00 1.78
312 318 5.000591 TCTTTGGTCTGCATGAATTTCGTA 58.999 37.500 0.00 0.00 0.00 3.43
357 363 5.514274 ACAAACCACATTTTCCTGTACTG 57.486 39.130 0.00 0.00 0.00 2.74
360 366 6.096987 TGCTTAACAAACCACATTTTCCTGTA 59.903 34.615 0.00 0.00 0.00 2.74
366 372 4.570369 GCAGTGCTTAACAAACCACATTTT 59.430 37.500 8.18 0.00 0.00 1.82
614 647 1.679898 GTGGTGGAGAGGGGTGAAG 59.320 63.158 0.00 0.00 0.00 3.02
615 648 1.846124 GGTGGTGGAGAGGGGTGAA 60.846 63.158 0.00 0.00 0.00 3.18
622 655 1.342074 TCTTGTCAGGTGGTGGAGAG 58.658 55.000 0.00 0.00 0.00 3.20
623 656 1.416401 GTTCTTGTCAGGTGGTGGAGA 59.584 52.381 0.00 0.00 0.00 3.71
624 657 1.543429 GGTTCTTGTCAGGTGGTGGAG 60.543 57.143 0.00 0.00 0.00 3.86
625 658 0.472471 GGTTCTTGTCAGGTGGTGGA 59.528 55.000 0.00 0.00 0.00 4.02
626 659 0.182537 TGGTTCTTGTCAGGTGGTGG 59.817 55.000 0.00 0.00 0.00 4.61
627 660 1.676006 GTTGGTTCTTGTCAGGTGGTG 59.324 52.381 0.00 0.00 0.00 4.17
628 661 1.283613 TGTTGGTTCTTGTCAGGTGGT 59.716 47.619 0.00 0.00 0.00 4.16
629 662 1.676006 GTGTTGGTTCTTGTCAGGTGG 59.324 52.381 0.00 0.00 0.00 4.61
630 663 1.676006 GGTGTTGGTTCTTGTCAGGTG 59.324 52.381 0.00 0.00 0.00 4.00
631 664 1.745827 CGGTGTTGGTTCTTGTCAGGT 60.746 52.381 0.00 0.00 0.00 4.00
632 665 0.944386 CGGTGTTGGTTCTTGTCAGG 59.056 55.000 0.00 0.00 0.00 3.86
633 666 0.307760 GCGGTGTTGGTTCTTGTCAG 59.692 55.000 0.00 0.00 0.00 3.51
634 667 1.098712 GGCGGTGTTGGTTCTTGTCA 61.099 55.000 0.00 0.00 0.00 3.58
635 668 0.818040 AGGCGGTGTTGGTTCTTGTC 60.818 55.000 0.00 0.00 0.00 3.18
636 669 0.818040 GAGGCGGTGTTGGTTCTTGT 60.818 55.000 0.00 0.00 0.00 3.16
637 670 1.515521 GGAGGCGGTGTTGGTTCTTG 61.516 60.000 0.00 0.00 0.00 3.02
638 671 1.228154 GGAGGCGGTGTTGGTTCTT 60.228 57.895 0.00 0.00 0.00 2.52
639 672 2.430367 GGAGGCGGTGTTGGTTCT 59.570 61.111 0.00 0.00 0.00 3.01
640 673 2.671963 GGGAGGCGGTGTTGGTTC 60.672 66.667 0.00 0.00 0.00 3.62
641 674 4.280019 GGGGAGGCGGTGTTGGTT 62.280 66.667 0.00 0.00 0.00 3.67
888 921 3.433740 GGTCAAAGTCAAAGTGGGAGAGT 60.434 47.826 0.00 0.00 0.00 3.24
889 922 3.142174 GGTCAAAGTCAAAGTGGGAGAG 58.858 50.000 0.00 0.00 0.00 3.20
890 923 2.158667 GGGTCAAAGTCAAAGTGGGAGA 60.159 50.000 0.00 0.00 0.00 3.71
891 924 2.230660 GGGTCAAAGTCAAAGTGGGAG 58.769 52.381 0.00 0.00 0.00 4.30
892 925 1.133606 GGGGTCAAAGTCAAAGTGGGA 60.134 52.381 0.00 0.00 0.00 4.37
893 926 1.328279 GGGGTCAAAGTCAAAGTGGG 58.672 55.000 0.00 0.00 0.00 4.61
894 927 1.328279 GGGGGTCAAAGTCAAAGTGG 58.672 55.000 0.00 0.00 0.00 4.00
895 928 0.951558 CGGGGGTCAAAGTCAAAGTG 59.048 55.000 0.00 0.00 0.00 3.16
896 929 0.179001 CCGGGGGTCAAAGTCAAAGT 60.179 55.000 0.00 0.00 0.00 2.66
897 930 1.524008 GCCGGGGGTCAAAGTCAAAG 61.524 60.000 2.18 0.00 0.00 2.77
898 931 1.529713 GCCGGGGGTCAAAGTCAAA 60.530 57.895 2.18 0.00 0.00 2.69
899 932 2.114411 GCCGGGGGTCAAAGTCAA 59.886 61.111 2.18 0.00 0.00 3.18
900 933 3.961414 GGCCGGGGGTCAAAGTCA 61.961 66.667 2.18 0.00 0.00 3.41
901 934 4.735358 GGGCCGGGGGTCAAAGTC 62.735 72.222 2.18 0.00 0.00 3.01
903 936 4.426313 GAGGGCCGGGGGTCAAAG 62.426 72.222 2.18 0.00 0.00 2.77
914 947 4.423209 AGGGAGGGAGTGAGGGCC 62.423 72.222 0.00 0.00 0.00 5.80
915 948 2.766229 GAGGGAGGGAGTGAGGGC 60.766 72.222 0.00 0.00 0.00 5.19
916 949 2.041405 GGAGGGAGGGAGTGAGGG 60.041 72.222 0.00 0.00 0.00 4.30
917 950 2.041405 GGGAGGGAGGGAGTGAGG 60.041 72.222 0.00 0.00 0.00 3.86
918 951 2.041405 GGGGAGGGAGGGAGTGAG 60.041 72.222 0.00 0.00 0.00 3.51
919 952 2.540910 AGGGGAGGGAGGGAGTGA 60.541 66.667 0.00 0.00 0.00 3.41
920 953 2.366167 CAGGGGAGGGAGGGAGTG 60.366 72.222 0.00 0.00 0.00 3.51
921 954 4.423209 GCAGGGGAGGGAGGGAGT 62.423 72.222 0.00 0.00 0.00 3.85
946 979 3.134127 CAGGGTTTAGCGCAGGGC 61.134 66.667 11.47 0.00 44.05 5.19
947 980 3.134127 GCAGGGTTTAGCGCAGGG 61.134 66.667 11.47 0.00 0.00 4.45
948 981 2.045926 AGCAGGGTTTAGCGCAGG 60.046 61.111 11.47 0.00 35.48 4.85
949 982 0.175760 TAGAGCAGGGTTTAGCGCAG 59.824 55.000 11.47 0.00 35.48 5.18
950 983 0.611200 TTAGAGCAGGGTTTAGCGCA 59.389 50.000 11.47 0.00 35.48 6.09
951 984 1.954927 ATTAGAGCAGGGTTTAGCGC 58.045 50.000 0.00 0.00 35.48 5.92
952 985 4.272748 GGTTTATTAGAGCAGGGTTTAGCG 59.727 45.833 0.00 0.00 35.48 4.26
953 986 4.579340 GGGTTTATTAGAGCAGGGTTTAGC 59.421 45.833 0.00 0.00 0.00 3.09
954 987 6.002653 AGGGTTTATTAGAGCAGGGTTTAG 57.997 41.667 0.00 0.00 0.00 1.85
955 988 5.395990 CGAGGGTTTATTAGAGCAGGGTTTA 60.396 44.000 0.00 0.00 0.00 2.01
956 989 4.625564 CGAGGGTTTATTAGAGCAGGGTTT 60.626 45.833 0.00 0.00 0.00 3.27
957 990 3.118371 CGAGGGTTTATTAGAGCAGGGTT 60.118 47.826 0.00 0.00 0.00 4.11
958 991 2.434702 CGAGGGTTTATTAGAGCAGGGT 59.565 50.000 0.00 0.00 0.00 4.34
959 992 2.224305 CCGAGGGTTTATTAGAGCAGGG 60.224 54.545 0.00 0.00 0.00 4.45
960 993 2.434702 ACCGAGGGTTTATTAGAGCAGG 59.565 50.000 0.00 0.00 27.29 4.85
961 994 3.821421 ACCGAGGGTTTATTAGAGCAG 57.179 47.619 0.00 0.00 27.29 4.24
962 995 3.640029 CCTACCGAGGGTTTATTAGAGCA 59.360 47.826 0.00 0.00 39.48 4.26
963 996 4.254402 CCTACCGAGGGTTTATTAGAGC 57.746 50.000 0.00 0.00 39.48 4.09
2084 2299 4.584638 ATGTAATGACACAGGGCCTTTA 57.415 40.909 1.32 0.00 38.76 1.85
2103 2318 5.920193 AGTGTATCCAAACCAAATCCATG 57.080 39.130 0.00 0.00 0.00 3.66
2165 2381 3.733443 AAACAAAGAACAGCACCATCC 57.267 42.857 0.00 0.00 0.00 3.51
2261 2480 1.867233 GGCTGTGTGCGGATATTACAG 59.133 52.381 0.00 0.00 44.05 2.74
2280 2499 9.981114 AAGTTAGAAAAGGTGATAACAAATTGG 57.019 29.630 0.00 0.00 31.90 3.16
2397 2634 3.009473 TCATGAAGCAGGAGCCTTTAGTT 59.991 43.478 0.00 0.00 43.56 2.24
2452 2690 5.753438 TGTACTGTGCTGTTCTAAGTTCAAG 59.247 40.000 0.00 0.00 0.00 3.02
2454 2692 5.270893 TGTACTGTGCTGTTCTAAGTTCA 57.729 39.130 0.00 0.00 0.00 3.18
2529 2767 7.913789 ACCATCAACTAAAGACACACCTAATA 58.086 34.615 0.00 0.00 0.00 0.98
2545 2812 9.499479 GAGATATCAATGTCAATACCATCAACT 57.501 33.333 5.32 0.00 0.00 3.16
2691 2963 4.046286 AGTCTCACTCTTCTCTGTCCAT 57.954 45.455 0.00 0.00 0.00 3.41
2721 2993 5.124936 CCCACCGTAGTCATCGAATATATCA 59.875 44.000 0.00 0.00 0.00 2.15
2882 5199 7.678218 GCAACTTGCTAAGAAAGATATGAGGTG 60.678 40.741 6.50 0.00 40.96 4.00
2919 5237 7.823745 AATAATCAGTTGCCTTAACCATAGG 57.176 36.000 0.00 0.00 40.24 2.57
2937 5255 7.039714 AGGTGGGTCAGTCTTTTTCAAATAATC 60.040 37.037 0.00 0.00 0.00 1.75
2992 5310 6.092259 GCCTCATTTACTAAAGACACACGAAT 59.908 38.462 0.00 0.00 0.00 3.34
3056 5378 0.179029 ACACGAACCCAAAGACCTGG 60.179 55.000 0.00 0.00 36.10 4.45
3058 5380 2.904434 AGATACACGAACCCAAAGACCT 59.096 45.455 0.00 0.00 0.00 3.85
3059 5381 3.329929 AGATACACGAACCCAAAGACC 57.670 47.619 0.00 0.00 0.00 3.85
3061 5383 4.345859 ACAAGATACACGAACCCAAAGA 57.654 40.909 0.00 0.00 0.00 2.52
3062 5384 6.148811 ACAATACAAGATACACGAACCCAAAG 59.851 38.462 0.00 0.00 0.00 2.77
3063 5385 5.998981 ACAATACAAGATACACGAACCCAAA 59.001 36.000 0.00 0.00 0.00 3.28
3065 5387 5.155278 ACAATACAAGATACACGAACCCA 57.845 39.130 0.00 0.00 0.00 4.51
3066 5388 7.781548 ATAACAATACAAGATACACGAACCC 57.218 36.000 0.00 0.00 0.00 4.11
3100 5542 6.461788 GGCCTGTACAGAACCAAATTGTTTTA 60.462 38.462 24.68 0.00 0.00 1.52
3106 5548 3.237268 TGGCCTGTACAGAACCAAATT 57.763 42.857 26.29 0.00 33.47 1.82
3155 5597 2.887152 GTTCCTCAGCTGGACACATTTT 59.113 45.455 15.13 0.00 35.58 1.82
3303 6060 0.329596 GGTTGCAGTTCCTCATCCCT 59.670 55.000 0.00 0.00 0.00 4.20
3336 6093 0.179043 TCAGCTTACCCGTGCAACAA 60.179 50.000 0.00 0.00 35.74 2.83
3414 6175 2.846193 CTGTCACGGAGAAGGGAAAAA 58.154 47.619 0.00 0.00 0.00 1.94
3813 6582 0.179067 TCACGCTCCGGTTGAAGTTT 60.179 50.000 0.00 0.00 0.00 2.66
4128 6897 2.815211 GCCTCGAACATGCTCGCA 60.815 61.111 13.58 2.57 38.73 5.10
4146 6915 1.604378 CCTGGAGAACTCGGCCAAT 59.396 57.895 2.24 0.00 0.00 3.16
4147 6916 2.592993 CCCTGGAGAACTCGGCCAA 61.593 63.158 2.24 0.00 0.00 4.52
4149 6918 2.683933 TCCCTGGAGAACTCGGCC 60.684 66.667 0.00 0.00 0.00 6.13
4234 7003 3.574445 CTGCTGCTGCTCGATGGC 61.574 66.667 17.00 0.00 40.48 4.40
4237 7006 2.511829 CTGCTGCTGCTGCTCGAT 60.512 61.111 27.67 0.00 40.48 3.59
4317 7089 1.249407 ACGGAGAACACTGGTCTCTC 58.751 55.000 21.10 11.79 33.84 3.20
4320 7092 1.760613 TGAAACGGAGAACACTGGTCT 59.239 47.619 0.00 0.00 0.00 3.85
4369 7146 3.078836 CCCTGGGGCAATGCAAGG 61.079 66.667 7.79 10.52 0.00 3.61
4511 7293 4.058732 TGCATGCCCGCAAGCAAG 62.059 61.111 16.42 0.00 45.67 4.01
4514 7296 3.524606 AGATGCATGCCCGCAAGC 61.525 61.111 16.68 9.82 46.87 4.01
4670 7452 1.079336 CTGCTGCTGCTGCTACAGA 60.079 57.895 27.67 10.07 41.78 3.41
4689 7471 1.374560 ACGCAGCAACAAACACTACA 58.625 45.000 0.00 0.00 0.00 2.74
4690 7472 3.285745 GTTACGCAGCAACAAACACTAC 58.714 45.455 0.00 0.00 0.00 2.73
4691 7473 2.033577 CGTTACGCAGCAACAAACACTA 60.034 45.455 0.00 0.00 0.00 2.74
4793 7583 3.119107 CATCTCCGATCCGATGCTG 57.881 57.895 2.53 0.00 31.67 4.41
4818 7608 3.961414 GGTTTGAGGACCCCGGCA 61.961 66.667 0.00 0.00 33.41 5.69
4822 7612 4.735358 GGCCGGTTTGAGGACCCC 62.735 72.222 1.90 0.00 36.28 4.95
4825 7615 0.034863 TATTGGGCCGGTTTGAGGAC 60.035 55.000 1.90 0.00 35.57 3.85
4826 7616 0.923358 ATATTGGGCCGGTTTGAGGA 59.077 50.000 1.90 0.00 0.00 3.71
4827 7617 1.032014 CATATTGGGCCGGTTTGAGG 58.968 55.000 1.90 0.00 0.00 3.86
4828 7618 1.676006 GACATATTGGGCCGGTTTGAG 59.324 52.381 1.90 0.00 0.00 3.02
4829 7619 1.683629 GGACATATTGGGCCGGTTTGA 60.684 52.381 1.90 0.00 0.00 2.69
4830 7620 0.744281 GGACATATTGGGCCGGTTTG 59.256 55.000 1.90 0.00 0.00 2.93
4831 7621 0.750182 CGGACATATTGGGCCGGTTT 60.750 55.000 1.90 0.00 36.32 3.27
4832 7622 1.153046 CGGACATATTGGGCCGGTT 60.153 57.895 1.90 0.00 36.32 4.44
4833 7623 2.508928 CGGACATATTGGGCCGGT 59.491 61.111 1.90 0.00 36.32 5.28
4835 7625 1.597027 GTCCGGACATATTGGGCCG 60.597 63.158 29.75 0.00 38.55 6.13
4836 7626 0.535102 CAGTCCGGACATATTGGGCC 60.535 60.000 35.00 5.25 0.00 5.80
4837 7627 0.468226 TCAGTCCGGACATATTGGGC 59.532 55.000 35.00 6.06 0.00 5.36
4838 7628 2.368548 TGATCAGTCCGGACATATTGGG 59.631 50.000 35.00 15.13 0.00 4.12
4839 7629 3.657634 CTGATCAGTCCGGACATATTGG 58.342 50.000 35.00 17.02 0.00 3.16
4840 7630 3.062763 GCTGATCAGTCCGGACATATTG 58.937 50.000 35.00 23.98 0.00 1.90
4841 7631 2.700371 TGCTGATCAGTCCGGACATATT 59.300 45.455 35.00 17.24 0.00 1.28
4842 7632 2.036475 GTGCTGATCAGTCCGGACATAT 59.964 50.000 35.00 26.21 31.77 1.78
4843 7633 1.409064 GTGCTGATCAGTCCGGACATA 59.591 52.381 35.00 22.77 31.77 2.29
4844 7634 0.176680 GTGCTGATCAGTCCGGACAT 59.823 55.000 35.00 21.49 31.77 3.06
4845 7635 1.591703 GTGCTGATCAGTCCGGACA 59.408 57.895 35.00 17.36 31.77 4.02
4846 7636 1.153549 GGTGCTGATCAGTCCGGAC 60.154 63.158 27.67 27.67 30.88 4.79
4847 7637 1.305297 AGGTGCTGATCAGTCCGGA 60.305 57.895 23.38 0.00 32.76 5.14
4848 7638 1.153489 CAGGTGCTGATCAGTCCGG 60.153 63.158 23.38 20.31 32.44 5.14
4849 7639 0.459237 GACAGGTGCTGATCAGTCCG 60.459 60.000 23.38 20.21 35.18 4.79
4850 7640 0.610174 TGACAGGTGCTGATCAGTCC 59.390 55.000 23.38 22.96 35.18 3.85
4851 7641 2.277969 CATGACAGGTGCTGATCAGTC 58.722 52.381 23.38 15.78 35.18 3.51
4852 7642 1.627329 ACATGACAGGTGCTGATCAGT 59.373 47.619 23.38 3.54 35.18 3.41
4853 7643 2.007608 CACATGACAGGTGCTGATCAG 58.992 52.381 18.84 18.84 35.18 2.90
4854 7644 1.339342 CCACATGACAGGTGCTGATCA 60.339 52.381 14.66 0.00 35.18 2.92
4855 7645 1.376543 CCACATGACAGGTGCTGATC 58.623 55.000 14.66 0.00 35.18 2.92
4856 7646 0.034767 CCCACATGACAGGTGCTGAT 60.035 55.000 14.66 0.00 35.18 2.90
4857 7647 1.376086 CCCACATGACAGGTGCTGA 59.624 57.895 14.66 0.00 35.18 4.26
4858 7648 1.676635 CCCCACATGACAGGTGCTG 60.677 63.158 14.66 7.72 37.52 4.41
4859 7649 2.759114 CCCCACATGACAGGTGCT 59.241 61.111 14.66 0.00 34.94 4.40
4860 7650 3.064324 GCCCCACATGACAGGTGC 61.064 66.667 14.66 0.00 34.94 5.01
4861 7651 2.361610 GGCCCCACATGACAGGTG 60.362 66.667 13.22 13.22 36.03 4.00
4862 7652 2.858476 TGGCCCCACATGACAGGT 60.858 61.111 0.00 0.00 0.00 4.00
4863 7653 2.044650 CTGGCCCCACATGACAGG 60.045 66.667 0.00 0.00 0.00 4.00
4864 7654 2.753043 GCTGGCCCCACATGACAG 60.753 66.667 0.00 0.00 0.00 3.51
4865 7655 4.365111 GGCTGGCCCCACATGACA 62.365 66.667 0.00 0.00 0.00 3.58
4882 7672 1.623811 ACATGCCCTTACGCCTATAGG 59.376 52.381 15.01 15.01 38.53 2.57
4883 7673 3.257375 TGTACATGCCCTTACGCCTATAG 59.743 47.826 0.00 0.00 0.00 1.31
4884 7674 3.232662 TGTACATGCCCTTACGCCTATA 58.767 45.455 0.00 0.00 0.00 1.31
4885 7675 2.043992 TGTACATGCCCTTACGCCTAT 58.956 47.619 0.00 0.00 0.00 2.57
4886 7676 1.487300 TGTACATGCCCTTACGCCTA 58.513 50.000 0.00 0.00 0.00 3.93
4887 7677 0.616371 TTGTACATGCCCTTACGCCT 59.384 50.000 0.00 0.00 0.00 5.52
4888 7678 1.333619 CATTGTACATGCCCTTACGCC 59.666 52.381 0.00 0.00 0.00 5.68
4889 7679 2.014128 ACATTGTACATGCCCTTACGC 58.986 47.619 0.00 0.00 0.00 4.42
4890 7680 4.185394 TGTACATTGTACATGCCCTTACG 58.815 43.478 22.58 0.00 0.00 3.18
4891 7681 6.317642 TCATTGTACATTGTACATGCCCTTAC 59.682 38.462 25.84 1.82 0.00 2.34
4892 7682 6.418946 TCATTGTACATTGTACATGCCCTTA 58.581 36.000 25.84 12.64 0.00 2.69
4893 7683 5.260424 TCATTGTACATTGTACATGCCCTT 58.740 37.500 25.84 8.26 0.00 3.95
4894 7684 4.854173 TCATTGTACATTGTACATGCCCT 58.146 39.130 25.84 9.56 0.00 5.19
4895 7685 5.560760 CGATCATTGTACATTGTACATGCCC 60.561 44.000 25.84 17.77 0.00 5.36
4896 7686 5.236263 TCGATCATTGTACATTGTACATGCC 59.764 40.000 25.84 18.00 0.00 4.40
4897 7687 6.285790 TCGATCATTGTACATTGTACATGC 57.714 37.500 25.84 14.30 0.00 4.06
4899 7689 9.981114 TCTTATCGATCATTGTACATTGTACAT 57.019 29.630 25.84 13.96 0.00 2.29
4900 7690 9.981114 ATCTTATCGATCATTGTACATTGTACA 57.019 29.630 22.58 22.58 0.00 2.90
4939 7729 9.399797 TGTCATCTCTTAATTACATGCAAGATT 57.600 29.630 0.00 0.00 0.00 2.40
4940 7730 8.969260 TGTCATCTCTTAATTACATGCAAGAT 57.031 30.769 0.00 0.00 0.00 2.40
4941 7731 8.791327 TTGTCATCTCTTAATTACATGCAAGA 57.209 30.769 0.00 0.00 0.00 3.02
4942 7732 8.886719 TCTTGTCATCTCTTAATTACATGCAAG 58.113 33.333 0.00 0.00 34.01 4.01
4943 7733 8.791327 TCTTGTCATCTCTTAATTACATGCAA 57.209 30.769 0.00 0.00 0.00 4.08
4944 7734 8.791327 TTCTTGTCATCTCTTAATTACATGCA 57.209 30.769 0.00 0.00 0.00 3.96
5011 7801 9.206870 TCGTCACGTTTTTAGGAATAACTAATT 57.793 29.630 0.00 0.00 33.31 1.40
5012 7802 8.761575 TCGTCACGTTTTTAGGAATAACTAAT 57.238 30.769 0.00 0.00 33.31 1.73
5013 7803 8.081633 TCTCGTCACGTTTTTAGGAATAACTAA 58.918 33.333 0.00 0.00 0.00 2.24
5014 7804 7.538678 GTCTCGTCACGTTTTTAGGAATAACTA 59.461 37.037 0.00 0.00 0.00 2.24
5015 7805 6.364435 GTCTCGTCACGTTTTTAGGAATAACT 59.636 38.462 0.00 0.00 0.00 2.24
5016 7806 6.144402 TGTCTCGTCACGTTTTTAGGAATAAC 59.856 38.462 0.00 0.00 0.00 1.89
5017 7807 6.215121 TGTCTCGTCACGTTTTTAGGAATAA 58.785 36.000 0.00 0.00 0.00 1.40
5018 7808 5.771469 TGTCTCGTCACGTTTTTAGGAATA 58.229 37.500 0.00 0.00 0.00 1.75
5019 7809 4.624015 TGTCTCGTCACGTTTTTAGGAAT 58.376 39.130 0.00 0.00 0.00 3.01
5020 7810 4.044336 TGTCTCGTCACGTTTTTAGGAA 57.956 40.909 0.00 0.00 0.00 3.36
5021 7811 3.713858 TGTCTCGTCACGTTTTTAGGA 57.286 42.857 0.00 0.00 0.00 2.94
5022 7812 6.090358 ACAATATGTCTCGTCACGTTTTTAGG 59.910 38.462 0.00 0.00 0.00 2.69
5023 7813 6.948228 CACAATATGTCTCGTCACGTTTTTAG 59.052 38.462 0.00 0.00 0.00 1.85
5024 7814 6.616893 GCACAATATGTCTCGTCACGTTTTTA 60.617 38.462 0.00 0.00 0.00 1.52
5025 7815 5.675970 CACAATATGTCTCGTCACGTTTTT 58.324 37.500 0.00 0.00 0.00 1.94
5026 7816 4.377022 GCACAATATGTCTCGTCACGTTTT 60.377 41.667 0.00 0.00 0.00 2.43
5027 7817 3.122948 GCACAATATGTCTCGTCACGTTT 59.877 43.478 0.00 0.00 0.00 3.60
5028 7818 2.666508 GCACAATATGTCTCGTCACGTT 59.333 45.455 0.00 0.00 0.00 3.99
5029 7819 2.094700 AGCACAATATGTCTCGTCACGT 60.095 45.455 0.00 0.00 0.00 4.49
5030 7820 2.530177 AGCACAATATGTCTCGTCACG 58.470 47.619 0.00 0.00 0.00 4.35
5031 7821 5.340803 TCTTAGCACAATATGTCTCGTCAC 58.659 41.667 0.00 0.00 0.00 3.67
5032 7822 5.357032 TCTCTTAGCACAATATGTCTCGTCA 59.643 40.000 0.00 0.00 0.00 4.35
5033 7823 5.822278 TCTCTTAGCACAATATGTCTCGTC 58.178 41.667 0.00 0.00 0.00 4.20
5034 7824 5.836821 TCTCTTAGCACAATATGTCTCGT 57.163 39.130 0.00 0.00 0.00 4.18
5035 7825 6.442112 TGATCTCTTAGCACAATATGTCTCG 58.558 40.000 0.00 0.00 0.00 4.04
5036 7826 8.306038 AGATGATCTCTTAGCACAATATGTCTC 58.694 37.037 0.00 0.00 0.00 3.36
5037 7827 8.192743 AGATGATCTCTTAGCACAATATGTCT 57.807 34.615 0.00 0.00 0.00 3.41
5038 7828 8.464770 GAGATGATCTCTTAGCACAATATGTC 57.535 38.462 14.98 0.00 40.30 3.06
5072 7862 6.067217 AGGCTTGCCTTCTCTTATTTAAGA 57.933 37.500 8.56 0.44 39.82 2.10
5073 7863 6.765915 AAGGCTTGCCTTCTCTTATTTAAG 57.234 37.500 20.03 0.00 34.65 1.85
5074 7864 7.451566 AGAAAAGGCTTGCCTTCTCTTATTTAA 59.548 33.333 24.85 0.00 0.00 1.52
5075 7865 6.948309 AGAAAAGGCTTGCCTTCTCTTATTTA 59.052 34.615 24.85 0.00 0.00 1.40
5076 7866 5.777223 AGAAAAGGCTTGCCTTCTCTTATTT 59.223 36.000 24.85 14.52 0.00 1.40
5077 7867 5.328565 AGAAAAGGCTTGCCTTCTCTTATT 58.671 37.500 24.85 15.16 0.00 1.40
5078 7868 4.928263 AGAAAAGGCTTGCCTTCTCTTAT 58.072 39.130 24.85 11.92 0.00 1.73
5079 7869 4.373156 AGAAAAGGCTTGCCTTCTCTTA 57.627 40.909 24.85 0.00 0.00 2.10
5080 7870 3.235750 AGAAAAGGCTTGCCTTCTCTT 57.764 42.857 24.85 16.48 0.00 2.85
5081 7871 2.967745 AGAAAAGGCTTGCCTTCTCT 57.032 45.000 24.85 22.75 0.00 3.10
5082 7872 3.120165 CGTAAGAAAAGGCTTGCCTTCTC 60.120 47.826 24.85 20.98 43.02 2.87
5083 7873 2.814336 CGTAAGAAAAGGCTTGCCTTCT 59.186 45.455 24.85 16.83 43.02 2.85
5084 7874 3.203161 CGTAAGAAAAGGCTTGCCTTC 57.797 47.619 24.85 14.94 43.02 3.46
5098 7888 3.263681 TGGAGGAGAGAGAACTCGTAAGA 59.736 47.826 0.00 0.00 46.64 2.10
5099 7889 3.375922 GTGGAGGAGAGAGAACTCGTAAG 59.624 52.174 0.00 0.00 46.64 2.34
5100 7890 3.345414 GTGGAGGAGAGAGAACTCGTAA 58.655 50.000 0.00 0.00 46.64 3.18
5101 7891 2.355920 GGTGGAGGAGAGAGAACTCGTA 60.356 54.545 0.00 0.00 46.64 3.43
5102 7892 1.614850 GGTGGAGGAGAGAGAACTCGT 60.615 57.143 0.00 0.00 46.64 4.18
5103 7893 1.099689 GGTGGAGGAGAGAGAACTCG 58.900 60.000 0.00 0.00 46.64 4.18
5104 7894 2.291282 TGAGGTGGAGGAGAGAGAACTC 60.291 54.545 0.00 0.00 42.90 3.01
5105 7895 1.713647 TGAGGTGGAGGAGAGAGAACT 59.286 52.381 0.00 0.00 0.00 3.01
5106 7896 2.223803 TGAGGTGGAGGAGAGAGAAC 57.776 55.000 0.00 0.00 0.00 3.01
5107 7897 2.313041 TGATGAGGTGGAGGAGAGAGAA 59.687 50.000 0.00 0.00 0.00 2.87
5108 7898 1.925959 TGATGAGGTGGAGGAGAGAGA 59.074 52.381 0.00 0.00 0.00 3.10
5109 7899 2.450867 TGATGAGGTGGAGGAGAGAG 57.549 55.000 0.00 0.00 0.00 3.20
5110 7900 3.411454 AATGATGAGGTGGAGGAGAGA 57.589 47.619 0.00 0.00 0.00 3.10
5111 7901 5.279910 GGATAAATGATGAGGTGGAGGAGAG 60.280 48.000 0.00 0.00 0.00 3.20
5112 7902 4.594920 GGATAAATGATGAGGTGGAGGAGA 59.405 45.833 0.00 0.00 0.00 3.71
5113 7903 4.596643 AGGATAAATGATGAGGTGGAGGAG 59.403 45.833 0.00 0.00 0.00 3.69
5114 7904 4.570926 AGGATAAATGATGAGGTGGAGGA 58.429 43.478 0.00 0.00 0.00 3.71
5115 7905 4.989875 AGGATAAATGATGAGGTGGAGG 57.010 45.455 0.00 0.00 0.00 4.30
5116 7906 6.877855 CACATAGGATAAATGATGAGGTGGAG 59.122 42.308 0.00 0.00 0.00 3.86
5117 7907 6.329986 ACACATAGGATAAATGATGAGGTGGA 59.670 38.462 0.00 0.00 0.00 4.02
5118 7908 6.537355 ACACATAGGATAAATGATGAGGTGG 58.463 40.000 0.00 0.00 0.00 4.61
5119 7909 7.172190 GTGACACATAGGATAAATGATGAGGTG 59.828 40.741 0.00 0.00 0.00 4.00
5120 7910 7.071698 AGTGACACATAGGATAAATGATGAGGT 59.928 37.037 8.59 0.00 0.00 3.85
5121 7911 7.448420 AGTGACACATAGGATAAATGATGAGG 58.552 38.462 8.59 0.00 0.00 3.86
5122 7912 7.601886 GGAGTGACACATAGGATAAATGATGAG 59.398 40.741 8.59 0.00 0.00 2.90
5123 7913 7.290948 AGGAGTGACACATAGGATAAATGATGA 59.709 37.037 8.59 0.00 0.00 2.92
5124 7914 7.448420 AGGAGTGACACATAGGATAAATGATG 58.552 38.462 8.59 0.00 0.00 3.07
5125 7915 7.623999 AGGAGTGACACATAGGATAAATGAT 57.376 36.000 8.59 0.00 0.00 2.45
5126 7916 8.547481 TTAGGAGTGACACATAGGATAAATGA 57.453 34.615 8.59 0.00 0.00 2.57
5127 7917 8.642432 TCTTAGGAGTGACACATAGGATAAATG 58.358 37.037 8.59 0.00 0.00 2.32
5128 7918 8.783660 TCTTAGGAGTGACACATAGGATAAAT 57.216 34.615 8.59 0.00 0.00 1.40
5129 7919 8.783660 ATCTTAGGAGTGACACATAGGATAAA 57.216 34.615 8.59 0.00 0.00 1.40
5130 7920 9.521841 CTATCTTAGGAGTGACACATAGGATAA 57.478 37.037 8.59 0.00 0.00 1.75
5131 7921 7.612244 GCTATCTTAGGAGTGACACATAGGATA 59.388 40.741 8.59 11.23 0.00 2.59
5132 7922 6.435904 GCTATCTTAGGAGTGACACATAGGAT 59.564 42.308 8.59 10.75 0.00 3.24
5133 7923 5.770663 GCTATCTTAGGAGTGACACATAGGA 59.229 44.000 8.59 4.35 0.00 2.94
5134 7924 5.536538 TGCTATCTTAGGAGTGACACATAGG 59.463 44.000 8.59 0.00 0.00 2.57
5135 7925 6.442952 GTGCTATCTTAGGAGTGACACATAG 58.557 44.000 8.59 5.55 0.00 2.23
5136 7926 5.302059 GGTGCTATCTTAGGAGTGACACATA 59.698 44.000 8.59 0.00 0.00 2.29
5137 7927 4.100189 GGTGCTATCTTAGGAGTGACACAT 59.900 45.833 8.59 0.00 0.00 3.21
5138 7928 3.447586 GGTGCTATCTTAGGAGTGACACA 59.552 47.826 8.59 0.00 0.00 3.72
5139 7929 3.447586 TGGTGCTATCTTAGGAGTGACAC 59.552 47.826 0.00 0.00 0.00 3.67
5140 7930 3.708451 TGGTGCTATCTTAGGAGTGACA 58.292 45.455 0.00 0.00 0.00 3.58
5141 7931 4.946478 ATGGTGCTATCTTAGGAGTGAC 57.054 45.455 0.00 0.00 0.00 3.67
5142 7932 4.716784 ACAATGGTGCTATCTTAGGAGTGA 59.283 41.667 0.00 0.00 0.00 3.41
5143 7933 5.028549 ACAATGGTGCTATCTTAGGAGTG 57.971 43.478 0.00 0.00 0.00 3.51
5144 7934 5.661312 TGTACAATGGTGCTATCTTAGGAGT 59.339 40.000 0.00 0.00 0.00 3.85
5145 7935 6.161855 TGTACAATGGTGCTATCTTAGGAG 57.838 41.667 0.00 0.00 0.00 3.69
5146 7936 6.524734 CATGTACAATGGTGCTATCTTAGGA 58.475 40.000 0.00 0.00 0.00 2.94
5147 7937 5.180117 GCATGTACAATGGTGCTATCTTAGG 59.820 44.000 11.12 0.00 34.85 2.69
5148 7938 5.180117 GGCATGTACAATGGTGCTATCTTAG 59.820 44.000 16.47 0.00 37.70 2.18
5149 7939 5.063204 GGCATGTACAATGGTGCTATCTTA 58.937 41.667 16.47 0.00 37.70 2.10
5150 7940 3.885297 GGCATGTACAATGGTGCTATCTT 59.115 43.478 16.47 0.00 37.70 2.40
5151 7941 3.480470 GGCATGTACAATGGTGCTATCT 58.520 45.455 16.47 0.00 37.70 1.98
5152 7942 2.554032 GGGCATGTACAATGGTGCTATC 59.446 50.000 16.47 3.12 37.70 2.08
5153 7943 2.175499 AGGGCATGTACAATGGTGCTAT 59.825 45.455 16.47 5.35 37.70 2.97
5154 7944 1.563879 AGGGCATGTACAATGGTGCTA 59.436 47.619 16.47 0.00 37.70 3.49
5155 7945 0.332632 AGGGCATGTACAATGGTGCT 59.667 50.000 16.47 0.00 37.70 4.40
5156 7946 2.051334 TAGGGCATGTACAATGGTGC 57.949 50.000 10.12 10.12 36.88 5.01
5157 7947 2.951642 CCTTAGGGCATGTACAATGGTG 59.048 50.000 0.00 0.00 0.00 4.17
5158 7948 2.091885 CCCTTAGGGCATGTACAATGGT 60.092 50.000 3.52 0.00 35.35 3.55
5159 7949 2.174639 TCCCTTAGGGCATGTACAATGG 59.825 50.000 13.54 0.00 43.94 3.16
5160 7950 3.214328 GTCCCTTAGGGCATGTACAATG 58.786 50.000 13.54 0.12 43.94 2.82
5161 7951 2.174854 GGTCCCTTAGGGCATGTACAAT 59.825 50.000 13.54 0.00 43.94 2.71
5162 7952 1.562475 GGTCCCTTAGGGCATGTACAA 59.438 52.381 13.54 0.00 43.94 2.41
5163 7953 1.209621 GGTCCCTTAGGGCATGTACA 58.790 55.000 13.54 0.00 43.94 2.90
5164 7954 1.141053 CAGGTCCCTTAGGGCATGTAC 59.859 57.143 13.54 4.89 44.59 2.90
5165 7955 1.507140 CAGGTCCCTTAGGGCATGTA 58.493 55.000 13.54 0.00 44.59 2.29
5166 7956 2.311287 CAGGTCCCTTAGGGCATGT 58.689 57.895 13.54 0.00 44.59 3.21
5168 7958 1.619363 TGCAGGTCCCTTAGGGCAT 60.619 57.895 13.54 2.49 43.94 4.40
5169 7959 2.204074 TGCAGGTCCCTTAGGGCA 60.204 61.111 13.54 3.48 43.94 5.36
5170 7960 2.272471 GTGCAGGTCCCTTAGGGC 59.728 66.667 13.54 7.82 43.94 5.19
5171 7961 2.584608 CGTGCAGGTCCCTTAGGG 59.415 66.667 11.94 11.94 46.11 3.53
5172 7962 2.584608 CCGTGCAGGTCCCTTAGG 59.415 66.667 5.57 0.00 34.51 2.69
5173 7963 2.584608 CCCGTGCAGGTCCCTTAG 59.415 66.667 5.57 0.00 38.74 2.18
5174 7964 3.712907 GCCCGTGCAGGTCCCTTA 61.713 66.667 5.57 0.00 38.74 2.69
5194 7984 2.035626 TTTAGGCAGGTGCAGGGC 59.964 61.111 4.01 0.00 44.36 5.19
5195 7985 0.257039 ATCTTTAGGCAGGTGCAGGG 59.743 55.000 4.01 0.00 44.36 4.45
5196 7986 3.144506 CATATCTTTAGGCAGGTGCAGG 58.855 50.000 4.01 0.00 44.36 4.85
5197 7987 3.812053 GACATATCTTTAGGCAGGTGCAG 59.188 47.826 4.01 0.00 44.36 4.41
5198 7988 3.433598 GGACATATCTTTAGGCAGGTGCA 60.434 47.826 4.01 0.00 44.36 4.57
5199 7989 3.142174 GGACATATCTTTAGGCAGGTGC 58.858 50.000 0.00 0.00 41.14 5.01
5200 7990 4.696479 AGGACATATCTTTAGGCAGGTG 57.304 45.455 0.00 0.00 0.00 4.00
5201 7991 5.468658 AGTAGGACATATCTTTAGGCAGGT 58.531 41.667 0.00 0.00 0.00 4.00
5202 7992 6.426646 AAGTAGGACATATCTTTAGGCAGG 57.573 41.667 0.00 0.00 0.00 4.85
5230 8020 8.750298 CCAGACTCCTAATCTAAAAAGACTGTA 58.250 37.037 0.00 0.00 0.00 2.74
5231 8021 7.310734 CCCAGACTCCTAATCTAAAAAGACTGT 60.311 40.741 0.00 0.00 0.00 3.55
5232 8022 7.044798 CCCAGACTCCTAATCTAAAAAGACTG 58.955 42.308 0.00 0.00 0.00 3.51
5233 8023 6.731448 ACCCAGACTCCTAATCTAAAAAGACT 59.269 38.462 0.00 0.00 0.00 3.24
5234 8024 6.948589 ACCCAGACTCCTAATCTAAAAAGAC 58.051 40.000 0.00 0.00 0.00 3.01
5235 8025 8.855804 ATACCCAGACTCCTAATCTAAAAAGA 57.144 34.615 0.00 0.00 0.00 2.52
5238 8028 9.725206 ACTAATACCCAGACTCCTAATCTAAAA 57.275 33.333 0.00 0.00 0.00 1.52
5239 8029 9.725206 AACTAATACCCAGACTCCTAATCTAAA 57.275 33.333 0.00 0.00 0.00 1.85
5240 8030 9.144298 CAACTAATACCCAGACTCCTAATCTAA 57.856 37.037 0.00 0.00 0.00 2.10
5241 8031 7.728981 CCAACTAATACCCAGACTCCTAATCTA 59.271 40.741 0.00 0.00 0.00 1.98
5242 8032 6.555360 CCAACTAATACCCAGACTCCTAATCT 59.445 42.308 0.00 0.00 0.00 2.40
5243 8033 6.553852 TCCAACTAATACCCAGACTCCTAATC 59.446 42.308 0.00 0.00 0.00 1.75
5244 8034 6.449956 TCCAACTAATACCCAGACTCCTAAT 58.550 40.000 0.00 0.00 0.00 1.73
5245 8035 5.845734 TCCAACTAATACCCAGACTCCTAA 58.154 41.667 0.00 0.00 0.00 2.69
5246 8036 5.476950 TCCAACTAATACCCAGACTCCTA 57.523 43.478 0.00 0.00 0.00 2.94
5247 8037 4.348020 TCCAACTAATACCCAGACTCCT 57.652 45.455 0.00 0.00 0.00 3.69
5248 8038 5.429130 CTTTCCAACTAATACCCAGACTCC 58.571 45.833 0.00 0.00 0.00 3.85
5249 8039 5.045797 ACCTTTCCAACTAATACCCAGACTC 60.046 44.000 0.00 0.00 0.00 3.36
5250 8040 4.850386 ACCTTTCCAACTAATACCCAGACT 59.150 41.667 0.00 0.00 0.00 3.24
5251 8041 5.175388 ACCTTTCCAACTAATACCCAGAC 57.825 43.478 0.00 0.00 0.00 3.51
5252 8042 5.853572 AACCTTTCCAACTAATACCCAGA 57.146 39.130 0.00 0.00 0.00 3.86
5253 8043 7.173032 ACTAAACCTTTCCAACTAATACCCAG 58.827 38.462 0.00 0.00 0.00 4.45
5254 8044 7.093965 ACTAAACCTTTCCAACTAATACCCA 57.906 36.000 0.00 0.00 0.00 4.51
5255 8045 6.600822 GGACTAAACCTTTCCAACTAATACCC 59.399 42.308 0.00 0.00 0.00 3.69
5256 8046 6.600822 GGGACTAAACCTTTCCAACTAATACC 59.399 42.308 0.00 0.00 0.00 2.73
5257 8047 6.314648 CGGGACTAAACCTTTCCAACTAATAC 59.685 42.308 0.00 0.00 0.00 1.89
5258 8048 6.213195 TCGGGACTAAACCTTTCCAACTAATA 59.787 38.462 0.00 0.00 0.00 0.98
5259 8049 5.013391 TCGGGACTAAACCTTTCCAACTAAT 59.987 40.000 0.00 0.00 0.00 1.73
5260 8050 4.347583 TCGGGACTAAACCTTTCCAACTAA 59.652 41.667 0.00 0.00 0.00 2.24
5261 8051 3.903090 TCGGGACTAAACCTTTCCAACTA 59.097 43.478 0.00 0.00 0.00 2.24
5262 8052 2.707257 TCGGGACTAAACCTTTCCAACT 59.293 45.455 0.00 0.00 0.00 3.16
5263 8053 3.130280 TCGGGACTAAACCTTTCCAAC 57.870 47.619 0.00 0.00 0.00 3.77
5264 8054 3.391955 TCTTCGGGACTAAACCTTTCCAA 59.608 43.478 0.00 0.00 0.00 3.53
5265 8055 2.974099 TCTTCGGGACTAAACCTTTCCA 59.026 45.455 0.00 0.00 0.00 3.53
5266 8056 3.690475 TCTTCGGGACTAAACCTTTCC 57.310 47.619 0.00 0.00 0.00 3.13
5267 8057 4.001652 CCTTCTTCGGGACTAAACCTTTC 58.998 47.826 0.00 0.00 0.00 2.62
5268 8058 3.393609 ACCTTCTTCGGGACTAAACCTTT 59.606 43.478 0.00 0.00 0.00 3.11
5269 8059 2.977580 ACCTTCTTCGGGACTAAACCTT 59.022 45.455 0.00 0.00 0.00 3.50
5270 8060 2.617658 ACCTTCTTCGGGACTAAACCT 58.382 47.619 0.00 0.00 0.00 3.50


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.