Multiple sequence alignment - TraesCS5B01G334900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G334900 chr5B 100.000 4692 0 0 1 4692 518082227 518077536 0.000000e+00 8665.0
1 TraesCS5B01G334900 chr5B 94.817 791 32 7 64 848 214137295 214138082 0.000000e+00 1225.0
2 TraesCS5B01G334900 chr5B 91.508 789 31 7 64 848 556532177 556531421 0.000000e+00 1053.0
3 TraesCS5B01G334900 chr5B 83.273 275 39 7 578 848 360858260 360858531 3.630000e-61 246.0
4 TraesCS5B01G334900 chr5B 89.610 77 4 1 2629 2701 496806883 496806807 1.390000e-15 95.3
5 TraesCS5B01G334900 chr5A 93.739 1166 43 9 2695 3852 544574303 544573160 0.000000e+00 1722.0
6 TraesCS5B01G334900 chr5A 93.514 1033 57 4 1607 2632 544575329 544574300 0.000000e+00 1528.0
7 TraesCS5B01G334900 chr5A 92.494 786 26 6 64 848 44802067 44802820 0.000000e+00 1094.0
8 TraesCS5B01G334900 chr5A 94.172 652 33 3 915 1564 544575979 544575331 0.000000e+00 989.0
9 TraesCS5B01G334900 chr5A 90.455 220 10 6 3944 4156 544573149 544572934 3.580000e-71 279.0
10 TraesCS5B01G334900 chr5A 86.667 165 17 3 4165 4327 544572544 544572383 1.340000e-40 178.0
11 TraesCS5B01G334900 chr5A 100.000 44 0 0 7 50 44801719 44801762 1.080000e-11 82.4
12 TraesCS5B01G334900 chr5D 92.451 1073 41 15 2797 3852 428826342 428825293 0.000000e+00 1496.0
13 TraesCS5B01G334900 chr5D 96.310 786 20 7 64 848 300954884 300954107 0.000000e+00 1282.0
14 TraesCS5B01G334900 chr5D 94.872 819 36 5 1820 2632 428827384 428826566 0.000000e+00 1275.0
15 TraesCS5B01G334900 chr5D 94.678 714 31 5 857 1564 428828282 428827570 0.000000e+00 1101.0
16 TraesCS5B01G334900 chr5D 95.402 609 23 5 251 857 10492959 10492354 0.000000e+00 965.0
17 TraesCS5B01G334900 chr5D 85.788 387 29 4 3944 4329 428825282 428824921 2.050000e-103 387.0
18 TraesCS5B01G334900 chr5D 97.357 227 6 0 2695 2921 428826569 428826343 2.050000e-103 387.0
19 TraesCS5B01G334900 chr5D 95.480 177 8 0 64 240 10493117 10492941 2.760000e-72 283.0
20 TraesCS5B01G334900 chr5D 88.496 226 24 2 4469 4692 428824819 428824594 5.980000e-69 272.0
21 TraesCS5B01G334900 chr5D 93.443 183 9 1 1607 1789 428827566 428827387 7.740000e-68 268.0
22 TraesCS5B01G334900 chr4B 93.427 852 43 11 1 848 638451058 638451900 0.000000e+00 1251.0
23 TraesCS5B01G334900 chr4B 91.781 73 5 1 2631 2703 659568468 659568539 2.990000e-17 100.0
24 TraesCS5B01G334900 chr2D 92.198 769 28 4 82 848 48334300 48333562 0.000000e+00 1059.0
25 TraesCS5B01G334900 chr2D 84.038 213 27 7 640 848 470045330 470045121 1.030000e-46 198.0
26 TraesCS5B01G334900 chr2D 81.119 143 23 3 1328 1467 27917154 27917013 1.380000e-20 111.0
27 TraesCS5B01G334900 chr2D 97.778 45 1 0 6 50 48334498 48334454 1.400000e-10 78.7
28 TraesCS5B01G334900 chr2A 92.169 498 22 7 1866 2359 778390506 778390990 0.000000e+00 688.0
29 TraesCS5B01G334900 chr2A 88.710 248 14 7 1541 1778 778390263 778390506 1.650000e-74 291.0
30 TraesCS5B01G334900 chr2A 80.000 140 24 4 1331 1467 30142012 30141874 2.990000e-17 100.0
31 TraesCS5B01G334900 chr2A 91.429 70 2 1 2630 2695 658150070 658150139 5.000000e-15 93.5
32 TraesCS5B01G334900 chr2A 96.000 50 2 0 2656 2705 25024320 25024271 1.080000e-11 82.4
33 TraesCS5B01G334900 chr1A 95.630 389 16 1 1972 2359 477725805 477726193 1.430000e-174 623.0
34 TraesCS5B01G334900 chr1A 85.887 248 20 8 1541 1778 477716824 477717066 2.800000e-62 250.0
35 TraesCS5B01G334900 chr1A 89.565 115 5 2 1866 1976 477717066 477717177 6.330000e-29 139.0
36 TraesCS5B01G334900 chr1A 94.286 70 4 0 2629 2698 60284311 60284380 1.790000e-19 108.0
37 TraesCS5B01G334900 chr7A 86.486 111 15 0 4329 4439 332307706 332307816 6.380000e-24 122.0
38 TraesCS5B01G334900 chr7A 97.917 48 1 0 2658 2705 682442503 682442456 3.010000e-12 84.2
39 TraesCS5B01G334900 chr1B 90.000 80 5 2 2628 2706 289297349 289297426 2.990000e-17 100.0
40 TraesCS5B01G334900 chr6D 89.189 74 4 1 2628 2697 371666936 371666863 6.470000e-14 89.8
41 TraesCS5B01G334900 chr4A 87.838 74 4 2 2630 2703 597826934 597827002 1.080000e-11 82.4
42 TraesCS5B01G334900 chr3B 95.455 44 2 0 2614 2657 527239926 527239969 2.340000e-08 71.3
43 TraesCS5B01G334900 chrUn 94.444 36 2 0 2622 2657 362465047 362465012 6.560000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G334900 chr5B 518077536 518082227 4691 True 8665.000000 8665 100.000000 1 4692 1 chr5B.!!$R2 4691
1 TraesCS5B01G334900 chr5B 214137295 214138082 787 False 1225.000000 1225 94.817000 64 848 1 chr5B.!!$F1 784
2 TraesCS5B01G334900 chr5B 556531421 556532177 756 True 1053.000000 1053 91.508000 64 848 1 chr5B.!!$R3 784
3 TraesCS5B01G334900 chr5A 544572383 544575979 3596 True 939.200000 1722 91.709400 915 4327 5 chr5A.!!$R1 3412
4 TraesCS5B01G334900 chr5A 44801719 44802820 1101 False 588.200000 1094 96.247000 7 848 2 chr5A.!!$F1 841
5 TraesCS5B01G334900 chr5D 300954107 300954884 777 True 1282.000000 1282 96.310000 64 848 1 chr5D.!!$R1 784
6 TraesCS5B01G334900 chr5D 428824594 428828282 3688 True 740.857143 1496 92.440714 857 4692 7 chr5D.!!$R3 3835
7 TraesCS5B01G334900 chr5D 10492354 10493117 763 True 624.000000 965 95.441000 64 857 2 chr5D.!!$R2 793
8 TraesCS5B01G334900 chr4B 638451058 638451900 842 False 1251.000000 1251 93.427000 1 848 1 chr4B.!!$F1 847
9 TraesCS5B01G334900 chr2D 48333562 48334498 936 True 568.850000 1059 94.988000 6 848 2 chr2D.!!$R3 842
10 TraesCS5B01G334900 chr2A 778390263 778390990 727 False 489.500000 688 90.439500 1541 2359 2 chr2A.!!$F2 818

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
849 1233 0.454285 CAACGCACGGGCATGTTTAG 60.454 55.0 11.77 0.0 41.24 1.85 F
1635 2026 0.725686 CGCATTTGAGCAGTCTCCTG 59.274 55.0 0.00 0.0 41.91 3.86 F
3087 3635 0.175531 AAACACAAGCCAGCCAACAC 59.824 50.0 0.00 0.0 0.00 3.32 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1999 2404 0.631212 AAGGGCCTATGAAACAGGGG 59.369 55.0 6.41 0.0 33.44 4.79 R
3314 3868 0.240945 GACTGAATTGCCAACCACCG 59.759 55.0 0.00 0.0 0.00 4.94 R
4099 4660 0.036010 ATCAGGGAACAACTCAGCCG 60.036 55.0 0.00 0.0 0.00 5.52 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 336 2.762535 TTACAGAGTTAGCCCTGCAC 57.237 50.000 0.00 0.00 33.90 4.57
86 455 1.264749 CGATCCCCACTTCTCCCACA 61.265 60.000 0.00 0.00 0.00 4.17
145 514 3.850098 AACAGCCTCGCCCAAGTGG 62.850 63.158 0.00 0.00 37.09 4.00
462 834 8.372459 TGCCTATTCGTTATACATGTCCTTATT 58.628 33.333 0.00 0.00 0.00 1.40
487 859 9.859427 TTGATTGATTGTTTTTGATGGAGATAC 57.141 29.630 0.00 0.00 0.00 2.24
561 934 9.748708 TTGTTATTTTCAGCCTAATGCATTATC 57.251 29.630 19.17 13.66 44.83 1.75
598 976 7.443272 ACGGGTAATGCATTATTTCTTAGGTAC 59.557 37.037 21.52 7.16 0.00 3.34
848 1232 1.576920 CAACGCACGGGCATGTTTA 59.423 52.632 11.77 0.00 41.24 2.01
849 1233 0.454285 CAACGCACGGGCATGTTTAG 60.454 55.000 11.77 0.00 41.24 1.85
854 1238 3.064207 CGCACGGGCATGTTTAGTATAT 58.936 45.455 11.77 0.00 41.24 0.86
855 1239 4.239304 CGCACGGGCATGTTTAGTATATA 58.761 43.478 11.77 0.00 41.24 0.86
864 1248 8.161425 GGGCATGTTTAGTATATAAAAGGGAGA 58.839 37.037 0.00 0.00 0.00 3.71
872 1256 7.863901 AGTATATAAAAGGGAGATGTGCTCT 57.136 36.000 0.00 0.00 43.43 4.09
885 1269 5.068636 AGATGTGCTCTCTCAACACAAAAT 58.931 37.500 0.00 0.00 46.47 1.82
886 1270 4.818534 TGTGCTCTCTCAACACAAAATC 57.181 40.909 0.00 0.00 41.11 2.17
887 1271 3.565482 TGTGCTCTCTCAACACAAAATCC 59.435 43.478 0.00 0.00 41.11 3.01
888 1272 3.565482 GTGCTCTCTCAACACAAAATCCA 59.435 43.478 0.00 0.00 34.43 3.41
891 1275 4.217118 GCTCTCTCAACACAAAATCCACAT 59.783 41.667 0.00 0.00 0.00 3.21
892 1276 5.278660 GCTCTCTCAACACAAAATCCACATT 60.279 40.000 0.00 0.00 0.00 2.71
894 1278 5.827267 TCTCTCAACACAAAATCCACATTCA 59.173 36.000 0.00 0.00 0.00 2.57
895 1279 6.491062 TCTCTCAACACAAAATCCACATTCAT 59.509 34.615 0.00 0.00 0.00 2.57
896 1280 7.665145 TCTCTCAACACAAAATCCACATTCATA 59.335 33.333 0.00 0.00 0.00 2.15
897 1281 7.592938 TCTCAACACAAAATCCACATTCATAC 58.407 34.615 0.00 0.00 0.00 2.39
996 1383 4.844085 TCCTGGATCAAGTTAAGTTGGAGA 59.156 41.667 20.32 4.56 0.00 3.71
1045 1433 2.722201 CCTTCCGTTCTCCTCCCCG 61.722 68.421 0.00 0.00 0.00 5.73
1099 1487 3.006756 GCTCACGGTAGCAGAGCCA 62.007 63.158 19.96 0.00 46.82 4.75
1440 1831 0.970937 TGGTCTCCCTCATCGTCCAC 60.971 60.000 0.00 0.00 0.00 4.02
1565 1956 6.071984 CACTATGGGGACTGTATCTTAGTCT 58.928 44.000 0.00 0.00 43.15 3.24
1567 1958 5.878406 ATGGGGACTGTATCTTAGTCTTG 57.122 43.478 0.00 0.00 43.15 3.02
1597 1988 7.262772 TCAACTCCGGTAGTTTTGATATACTG 58.737 38.462 14.28 3.71 46.61 2.74
1599 1990 5.363005 ACTCCGGTAGTTTTGATATACTGCT 59.637 40.000 0.00 0.00 33.35 4.24
1634 2025 1.023513 GCGCATTTGAGCAGTCTCCT 61.024 55.000 0.30 0.00 40.65 3.69
1635 2026 0.725686 CGCATTTGAGCAGTCTCCTG 59.274 55.000 0.00 0.00 41.91 3.86
1654 2045 0.748005 GCTGCACGGTTACATGGGAT 60.748 55.000 0.00 0.00 0.00 3.85
1705 2106 7.359097 GCGATTGAAATCTCATCTGAGTATGAC 60.359 40.741 7.07 0.00 42.60 3.06
1750 2151 9.975218 AAGTGATTCCATTAGTTATAACTTGGT 57.025 29.630 25.49 14.21 37.87 3.67
1782 2183 3.197549 CGGGAATGGAAAATTTGTGGGAT 59.802 43.478 0.00 0.00 0.00 3.85
1790 2191 4.283212 GGAAAATTTGTGGGATTGTCCTCA 59.717 41.667 0.00 0.00 37.73 3.86
1791 2192 5.221621 GGAAAATTTGTGGGATTGTCCTCAA 60.222 40.000 0.00 0.00 37.73 3.02
1793 2194 3.593442 TTTGTGGGATTGTCCTCAAGT 57.407 42.857 0.00 0.00 40.14 3.16
1810 2211 2.998670 CAAGTGATGTGTACTCTGGCTG 59.001 50.000 0.00 0.00 0.00 4.85
1834 2235 4.301205 TGAGATTGATCCATGGGAGAAGA 58.699 43.478 13.02 0.00 34.05 2.87
1880 2281 6.870965 CAGAGAGGTATATTGCCACTGATTAC 59.129 42.308 0.00 0.00 0.00 1.89
1892 2293 3.127548 CCACTGATTACATGTGGCAGAAC 59.872 47.826 22.88 5.25 43.61 3.01
1981 2386 6.597280 ACTCTAGAATTTGAGAATTGGACTGC 59.403 38.462 9.88 0.00 35.65 4.40
1995 2400 3.031736 TGGACTGCATCTTCCCTAGTAC 58.968 50.000 6.68 0.00 0.00 2.73
1999 2404 1.762957 TGCATCTTCCCTAGTACCTGC 59.237 52.381 0.00 0.00 0.00 4.85
2011 2416 2.557869 AGTACCTGCCCCTGTTTCATA 58.442 47.619 0.00 0.00 0.00 2.15
2181 2593 4.142609 TCACTTGATAGAATCTGGCACC 57.857 45.455 0.00 0.00 0.00 5.01
2359 2771 5.532779 GGAGTTGTTCTTCAAGAATCAGGTT 59.467 40.000 2.39 0.00 36.50 3.50
2383 2795 5.766174 TCGTTGCATTCTTTAGTTTAACCCT 59.234 36.000 0.00 0.00 0.00 4.34
2386 2798 7.749126 CGTTGCATTCTTTAGTTTAACCCTTAG 59.251 37.037 0.00 0.00 0.00 2.18
2418 2831 5.823209 TGATACTTCCATCATTGCAACTG 57.177 39.130 0.00 1.67 29.93 3.16
2441 2854 7.068226 ACTGCTATGTTGGTTTATCATTTACCC 59.932 37.037 0.00 0.00 0.00 3.69
2444 2857 8.421002 GCTATGTTGGTTTATCATTTACCCATT 58.579 33.333 0.00 0.00 0.00 3.16
2501 2917 4.080582 CCAGGGGTGTGTCATCAAATACTA 60.081 45.833 0.00 0.00 0.00 1.82
2502 2918 5.496556 CAGGGGTGTGTCATCAAATACTAA 58.503 41.667 0.00 0.00 0.00 2.24
2628 3044 8.102676 TCTGTTTCATCAAGGAATCATAGTCAA 58.897 33.333 0.00 0.00 0.00 3.18
2629 3045 8.272545 TGTTTCATCAAGGAATCATAGTCAAG 57.727 34.615 0.00 0.00 0.00 3.02
2630 3046 7.884877 TGTTTCATCAAGGAATCATAGTCAAGT 59.115 33.333 0.00 0.00 0.00 3.16
2631 3047 9.383519 GTTTCATCAAGGAATCATAGTCAAGTA 57.616 33.333 0.00 0.00 0.00 2.24
2632 3048 8.948631 TTCATCAAGGAATCATAGTCAAGTAC 57.051 34.615 0.00 0.00 0.00 2.73
2633 3049 8.311395 TCATCAAGGAATCATAGTCAAGTACT 57.689 34.615 0.00 0.00 42.62 2.73
2634 3050 8.417106 TCATCAAGGAATCATAGTCAAGTACTC 58.583 37.037 0.00 0.00 39.80 2.59
2635 3051 7.113658 TCAAGGAATCATAGTCAAGTACTCC 57.886 40.000 0.00 0.00 39.80 3.85
2636 3052 6.098409 TCAAGGAATCATAGTCAAGTACTCCC 59.902 42.308 0.00 0.00 39.80 4.30
2637 3053 5.782925 AGGAATCATAGTCAAGTACTCCCT 58.217 41.667 0.00 0.00 39.80 4.20
2638 3054 5.836358 AGGAATCATAGTCAAGTACTCCCTC 59.164 44.000 0.00 0.00 39.80 4.30
2639 3055 5.836358 GGAATCATAGTCAAGTACTCCCTCT 59.164 44.000 0.00 0.00 39.80 3.69
2640 3056 6.239176 GGAATCATAGTCAAGTACTCCCTCTG 60.239 46.154 0.00 0.00 39.80 3.35
2641 3057 5.194473 TCATAGTCAAGTACTCCCTCTGT 57.806 43.478 0.00 0.00 39.80 3.41
2642 3058 6.323210 TCATAGTCAAGTACTCCCTCTGTA 57.677 41.667 0.00 0.00 39.80 2.74
2643 3059 6.728411 TCATAGTCAAGTACTCCCTCTGTAA 58.272 40.000 0.00 0.00 39.80 2.41
2644 3060 7.179966 TCATAGTCAAGTACTCCCTCTGTAAA 58.820 38.462 0.00 0.00 39.80 2.01
2645 3061 5.725325 AGTCAAGTACTCCCTCTGTAAAC 57.275 43.478 0.00 0.00 30.33 2.01
2646 3062 5.145564 AGTCAAGTACTCCCTCTGTAAACA 58.854 41.667 0.00 0.00 30.33 2.83
2647 3063 5.601313 AGTCAAGTACTCCCTCTGTAAACAA 59.399 40.000 0.00 0.00 30.33 2.83
2648 3064 6.099269 AGTCAAGTACTCCCTCTGTAAACAAA 59.901 38.462 0.00 0.00 30.33 2.83
2649 3065 6.935208 GTCAAGTACTCCCTCTGTAAACAAAT 59.065 38.462 0.00 0.00 0.00 2.32
2650 3066 8.092687 GTCAAGTACTCCCTCTGTAAACAAATA 58.907 37.037 0.00 0.00 0.00 1.40
2651 3067 8.822805 TCAAGTACTCCCTCTGTAAACAAATAT 58.177 33.333 0.00 0.00 0.00 1.28
2657 3073 9.047947 ACTCCCTCTGTAAACAAATATAAGAGT 57.952 33.333 0.00 0.00 0.00 3.24
2674 3090 7.811117 ATAAGAGTAGTGATCTAAACGCTCT 57.189 36.000 0.00 0.88 36.80 4.09
2675 3091 6.518208 AAGAGTAGTGATCTAAACGCTCTT 57.482 37.500 13.52 13.52 38.59 2.85
2676 3092 5.885881 AGAGTAGTGATCTAAACGCTCTTG 58.114 41.667 0.00 0.00 33.87 3.02
2677 3093 5.416326 AGAGTAGTGATCTAAACGCTCTTGT 59.584 40.000 0.00 0.00 33.87 3.16
2678 3094 6.598457 AGAGTAGTGATCTAAACGCTCTTGTA 59.402 38.462 0.00 0.00 33.87 2.41
2679 3095 7.283580 AGAGTAGTGATCTAAACGCTCTTGTAT 59.716 37.037 0.00 0.00 33.87 2.29
2680 3096 7.773149 AGTAGTGATCTAAACGCTCTTGTATT 58.227 34.615 0.00 0.00 0.00 1.89
2681 3097 8.251721 AGTAGTGATCTAAACGCTCTTGTATTT 58.748 33.333 0.00 0.00 0.00 1.40
2682 3098 7.527084 AGTGATCTAAACGCTCTTGTATTTC 57.473 36.000 0.00 0.00 0.00 2.17
2683 3099 7.324178 AGTGATCTAAACGCTCTTGTATTTCT 58.676 34.615 0.00 0.00 0.00 2.52
2684 3100 7.819900 AGTGATCTAAACGCTCTTGTATTTCTT 59.180 33.333 0.00 0.00 0.00 2.52
2685 3101 8.443937 GTGATCTAAACGCTCTTGTATTTCTTT 58.556 33.333 0.00 0.00 0.00 2.52
2686 3102 9.647797 TGATCTAAACGCTCTTGTATTTCTTTA 57.352 29.630 0.00 0.00 0.00 1.85
2687 3103 9.903185 GATCTAAACGCTCTTGTATTTCTTTAC 57.097 33.333 0.00 0.00 0.00 2.01
2688 3104 7.946043 TCTAAACGCTCTTGTATTTCTTTACG 58.054 34.615 0.00 0.00 0.00 3.18
2689 3105 5.526010 AACGCTCTTGTATTTCTTTACGG 57.474 39.130 0.00 0.00 0.00 4.02
2690 3106 4.813027 ACGCTCTTGTATTTCTTTACGGA 58.187 39.130 0.00 0.00 0.00 4.69
2691 3107 4.863131 ACGCTCTTGTATTTCTTTACGGAG 59.137 41.667 0.00 0.00 32.54 4.63
2692 3108 4.267928 CGCTCTTGTATTTCTTTACGGAGG 59.732 45.833 0.00 0.00 31.29 4.30
2693 3109 4.571176 GCTCTTGTATTTCTTTACGGAGGG 59.429 45.833 0.00 0.00 31.29 4.30
2742 3158 2.264005 TTACGTGGGTTTGCACATCT 57.736 45.000 0.00 0.00 0.00 2.90
2860 3276 1.599518 CCGTGTGCTGCAGGGTTTA 60.600 57.895 17.12 0.00 45.42 2.01
2874 3290 4.016444 CAGGGTTTACCAATATGTGTGCT 58.984 43.478 0.69 0.00 43.89 4.40
2906 3322 6.959639 ATGAGAACCTCTAAAGTTTTTGCA 57.040 33.333 0.00 0.00 0.00 4.08
2907 3323 6.959639 TGAGAACCTCTAAAGTTTTTGCAT 57.040 33.333 0.00 0.00 0.00 3.96
2955 3496 4.332543 TGACCGATGATTTAGCATTGTCAC 59.667 41.667 9.00 0.00 36.39 3.67
3058 3605 0.948678 GTTTAAGCTGGAACACCGCA 59.051 50.000 7.40 0.00 0.00 5.69
3087 3635 0.175531 AAACACAAGCCAGCCAACAC 59.824 50.000 0.00 0.00 0.00 3.32
3129 3677 1.336240 GCAAGAAGGCAAGCGAAACAT 60.336 47.619 0.00 0.00 0.00 2.71
3288 3842 1.177401 TATCGAGCACTGCTGTGACT 58.823 50.000 25.94 20.57 46.55 3.41
3314 3868 0.251341 ATATCAAAGATGGCGGCCCC 60.251 55.000 17.97 8.54 0.00 5.80
3454 4008 9.890629 TTAGAAATTCTAGCTTCAAGCATCTTA 57.109 29.630 13.10 0.00 45.56 2.10
3586 4141 2.607631 TCTTCGTGAACGGTTTCCTT 57.392 45.000 2.59 0.00 40.29 3.36
3700 4255 3.991773 TCACTTCGGTGTAATGTAAGCAC 59.008 43.478 0.00 0.00 45.46 4.40
3707 4267 3.492313 GTGTAATGTAAGCACTGCAAGC 58.508 45.455 3.30 2.71 37.60 4.01
3744 4305 3.612251 CCAAAGGATGGCTGCCAG 58.388 61.111 27.20 11.78 43.80 4.85
3745 4306 2.718073 CCAAAGGATGGCTGCCAGC 61.718 63.158 27.86 27.86 43.80 4.85
3746 4307 2.753043 AAAGGATGGCTGCCAGCG 60.753 61.111 28.39 0.00 41.37 5.18
3747 4308 4.809496 AAGGATGGCTGCCAGCGG 62.809 66.667 28.39 0.00 41.37 5.52
3785 4346 0.593128 GCAGCCCTGTGTGTGTAAAG 59.407 55.000 0.00 0.00 0.00 1.85
3802 4363 3.417690 AAAGCGGTCGACAGTAGTATC 57.582 47.619 18.91 0.00 0.00 2.24
3803 4364 1.307097 AGCGGTCGACAGTAGTATCC 58.693 55.000 18.91 0.00 0.00 2.59
3804 4365 1.134159 AGCGGTCGACAGTAGTATCCT 60.134 52.381 18.91 0.82 0.00 3.24
3805 4366 1.263752 GCGGTCGACAGTAGTATCCTC 59.736 57.143 18.91 0.00 0.00 3.71
3844 4405 1.522355 CGCGCCCAGATGAGAACAT 60.522 57.895 0.00 0.00 39.67 2.71
3846 4407 1.806247 CGCGCCCAGATGAGAACATTA 60.806 52.381 0.00 0.00 36.82 1.90
3852 4413 6.398095 CGCCCAGATGAGAACATTATATACA 58.602 40.000 0.00 0.00 36.82 2.29
3853 4414 7.044181 CGCCCAGATGAGAACATTATATACAT 58.956 38.462 0.00 0.00 36.82 2.29
3854 4415 8.197439 CGCCCAGATGAGAACATTATATACATA 58.803 37.037 0.00 0.00 36.82 2.29
3855 4416 9.319143 GCCCAGATGAGAACATTATATACATAC 57.681 37.037 0.00 0.00 36.82 2.39
3879 4440 8.084590 ACTCTTTTTACTGGTTAGTGATTTCG 57.915 34.615 0.00 0.00 37.78 3.46
3880 4441 7.172703 ACTCTTTTTACTGGTTAGTGATTTCGG 59.827 37.037 0.00 0.00 37.78 4.30
3881 4442 7.218614 TCTTTTTACTGGTTAGTGATTTCGGA 58.781 34.615 0.00 0.00 37.78 4.55
3882 4443 7.716123 TCTTTTTACTGGTTAGTGATTTCGGAA 59.284 33.333 0.00 0.00 37.78 4.30
3883 4444 6.790285 TTTACTGGTTAGTGATTTCGGAAC 57.210 37.500 0.00 0.00 37.78 3.62
3884 4445 4.618920 ACTGGTTAGTGATTTCGGAACT 57.381 40.909 0.00 0.00 35.34 3.01
3885 4446 4.566987 ACTGGTTAGTGATTTCGGAACTC 58.433 43.478 1.47 1.47 35.34 3.01
3886 4447 4.039973 ACTGGTTAGTGATTTCGGAACTCA 59.960 41.667 6.68 6.68 35.34 3.41
3887 4448 5.160607 TGGTTAGTGATTTCGGAACTCAT 57.839 39.130 13.00 6.28 0.00 2.90
3888 4449 5.175859 TGGTTAGTGATTTCGGAACTCATC 58.824 41.667 13.00 4.37 0.00 2.92
3889 4450 5.046591 TGGTTAGTGATTTCGGAACTCATCT 60.047 40.000 13.00 13.22 0.00 2.90
3890 4451 5.292101 GGTTAGTGATTTCGGAACTCATCTG 59.708 44.000 13.00 0.00 35.59 2.90
3891 4452 4.808414 AGTGATTTCGGAACTCATCTGA 57.192 40.909 13.00 0.00 41.81 3.27
3892 4453 5.350504 AGTGATTTCGGAACTCATCTGAT 57.649 39.130 13.00 0.00 43.00 2.90
3893 4454 5.355596 AGTGATTTCGGAACTCATCTGATC 58.644 41.667 13.00 1.79 43.00 2.92
3894 4455 4.208047 GTGATTTCGGAACTCATCTGATCG 59.792 45.833 13.00 0.00 43.00 3.69
3895 4456 3.868757 TTTCGGAACTCATCTGATCGT 57.131 42.857 0.00 0.00 43.00 3.73
3896 4457 3.868757 TTCGGAACTCATCTGATCGTT 57.131 42.857 2.51 2.51 43.00 3.85
3897 4458 3.868757 TCGGAACTCATCTGATCGTTT 57.131 42.857 4.07 0.00 38.56 3.60
3898 4459 3.511699 TCGGAACTCATCTGATCGTTTG 58.488 45.455 4.07 1.93 38.56 2.93
3899 4460 2.604914 CGGAACTCATCTGATCGTTTGG 59.395 50.000 4.07 0.00 36.44 3.28
3900 4461 2.352960 GGAACTCATCTGATCGTTTGGC 59.647 50.000 4.07 0.00 0.00 4.52
3901 4462 3.265791 GAACTCATCTGATCGTTTGGCT 58.734 45.455 4.07 0.00 0.00 4.75
3902 4463 3.340814 ACTCATCTGATCGTTTGGCTT 57.659 42.857 0.00 0.00 0.00 4.35
3903 4464 3.679389 ACTCATCTGATCGTTTGGCTTT 58.321 40.909 0.00 0.00 0.00 3.51
3904 4465 4.074970 ACTCATCTGATCGTTTGGCTTTT 58.925 39.130 0.00 0.00 0.00 2.27
3905 4466 5.245531 ACTCATCTGATCGTTTGGCTTTTA 58.754 37.500 0.00 0.00 0.00 1.52
3906 4467 5.882557 ACTCATCTGATCGTTTGGCTTTTAT 59.117 36.000 0.00 0.00 0.00 1.40
3907 4468 7.047891 ACTCATCTGATCGTTTGGCTTTTATA 58.952 34.615 0.00 0.00 0.00 0.98
3908 4469 7.552687 ACTCATCTGATCGTTTGGCTTTTATAA 59.447 33.333 0.00 0.00 0.00 0.98
3909 4470 8.450578 TCATCTGATCGTTTGGCTTTTATAAT 57.549 30.769 0.00 0.00 0.00 1.28
3910 4471 8.559536 TCATCTGATCGTTTGGCTTTTATAATC 58.440 33.333 0.00 0.00 0.00 1.75
3911 4472 7.857734 TCTGATCGTTTGGCTTTTATAATCA 57.142 32.000 0.00 0.00 0.00 2.57
3912 4473 8.275015 TCTGATCGTTTGGCTTTTATAATCAA 57.725 30.769 0.00 0.00 0.00 2.57
3913 4474 8.397906 TCTGATCGTTTGGCTTTTATAATCAAG 58.602 33.333 0.00 0.00 0.00 3.02
3914 4475 8.050778 TGATCGTTTGGCTTTTATAATCAAGT 57.949 30.769 0.19 0.00 0.00 3.16
3915 4476 7.967854 TGATCGTTTGGCTTTTATAATCAAGTG 59.032 33.333 0.19 0.00 0.00 3.16
3916 4477 7.209471 TCGTTTGGCTTTTATAATCAAGTGT 57.791 32.000 0.19 0.00 0.00 3.55
3917 4478 7.653647 TCGTTTGGCTTTTATAATCAAGTGTT 58.346 30.769 0.19 0.00 0.00 3.32
3918 4479 8.138712 TCGTTTGGCTTTTATAATCAAGTGTTT 58.861 29.630 0.19 0.00 0.00 2.83
3919 4480 8.424731 CGTTTGGCTTTTATAATCAAGTGTTTC 58.575 33.333 0.19 0.00 0.00 2.78
3920 4481 9.255304 GTTTGGCTTTTATAATCAAGTGTTTCA 57.745 29.630 0.19 0.00 0.00 2.69
3921 4482 8.810652 TTGGCTTTTATAATCAAGTGTTTCAC 57.189 30.769 0.19 0.00 34.10 3.18
3922 4483 7.375053 TGGCTTTTATAATCAAGTGTTTCACC 58.625 34.615 0.00 0.00 34.49 4.02
3923 4484 7.014711 TGGCTTTTATAATCAAGTGTTTCACCA 59.985 33.333 0.00 0.00 34.49 4.17
3924 4485 7.328493 GGCTTTTATAATCAAGTGTTTCACCAC 59.672 37.037 0.00 0.00 34.49 4.16
3925 4486 7.328493 GCTTTTATAATCAAGTGTTTCACCACC 59.672 37.037 0.00 0.00 35.93 4.61
3926 4487 7.825331 TTTATAATCAAGTGTTTCACCACCA 57.175 32.000 0.00 0.00 35.93 4.17
3927 4488 8.415950 TTTATAATCAAGTGTTTCACCACCAT 57.584 30.769 0.00 0.00 35.93 3.55
3928 4489 4.853924 AATCAAGTGTTTCACCACCATC 57.146 40.909 0.00 0.00 35.93 3.51
3929 4490 2.217750 TCAAGTGTTTCACCACCATCG 58.782 47.619 0.00 0.00 35.93 3.84
3930 4491 1.946768 CAAGTGTTTCACCACCATCGT 59.053 47.619 0.00 0.00 35.93 3.73
3931 4492 2.341846 AGTGTTTCACCACCATCGTT 57.658 45.000 0.00 0.00 35.93 3.85
3932 4493 3.478857 AGTGTTTCACCACCATCGTTA 57.521 42.857 0.00 0.00 35.93 3.18
3933 4494 4.015872 AGTGTTTCACCACCATCGTTAT 57.984 40.909 0.00 0.00 35.93 1.89
3934 4495 3.751175 AGTGTTTCACCACCATCGTTATG 59.249 43.478 0.00 0.00 35.93 1.90
3935 4496 3.749088 GTGTTTCACCACCATCGTTATGA 59.251 43.478 0.00 0.00 34.84 2.15
3936 4497 3.749088 TGTTTCACCACCATCGTTATGAC 59.251 43.478 0.00 0.00 34.84 3.06
3937 4498 2.684001 TCACCACCATCGTTATGACC 57.316 50.000 0.00 0.00 34.84 4.02
3938 4499 1.903183 TCACCACCATCGTTATGACCA 59.097 47.619 0.00 0.00 34.84 4.02
3939 4500 2.093711 TCACCACCATCGTTATGACCAG 60.094 50.000 0.00 0.00 34.84 4.00
3940 4501 1.299541 CCACCATCGTTATGACCAGC 58.700 55.000 0.00 0.00 34.84 4.85
3941 4502 0.930310 CACCATCGTTATGACCAGCG 59.070 55.000 0.00 0.00 34.84 5.18
3942 4503 0.821517 ACCATCGTTATGACCAGCGA 59.178 50.000 0.00 0.00 34.84 4.93
3995 4556 2.324860 GTTTTCGGTGTTGCTAATGGC 58.675 47.619 0.00 0.00 42.22 4.40
3998 4559 1.743623 CGGTGTTGCTAATGGCCGA 60.744 57.895 0.00 0.00 41.45 5.54
4013 4574 0.659957 GCCGATCAATCAGCTGTTCC 59.340 55.000 14.67 0.00 0.00 3.62
4053 4614 1.066215 GGCTTATGGTTTGCTTTGGGG 60.066 52.381 0.00 0.00 0.00 4.96
4054 4615 1.623311 GCTTATGGTTTGCTTTGGGGT 59.377 47.619 0.00 0.00 0.00 4.95
4055 4616 2.353704 GCTTATGGTTTGCTTTGGGGTC 60.354 50.000 0.00 0.00 0.00 4.46
4056 4617 1.931635 TATGGTTTGCTTTGGGGTCC 58.068 50.000 0.00 0.00 0.00 4.46
4057 4618 0.190815 ATGGTTTGCTTTGGGGTCCT 59.809 50.000 0.00 0.00 0.00 3.85
4058 4619 0.758685 TGGTTTGCTTTGGGGTCCTG 60.759 55.000 0.00 0.00 0.00 3.86
4060 4621 1.119684 GTTTGCTTTGGGGTCCTGTT 58.880 50.000 0.00 0.00 0.00 3.16
4061 4622 1.068588 GTTTGCTTTGGGGTCCTGTTC 59.931 52.381 0.00 0.00 0.00 3.18
4062 4623 0.555769 TTGCTTTGGGGTCCTGTTCT 59.444 50.000 0.00 0.00 0.00 3.01
4063 4624 0.110486 TGCTTTGGGGTCCTGTTCTC 59.890 55.000 0.00 0.00 0.00 2.87
4064 4625 0.402121 GCTTTGGGGTCCTGTTCTCT 59.598 55.000 0.00 0.00 0.00 3.10
4099 4660 4.051963 CGCTCATTCGATCGGCGC 62.052 66.667 19.62 0.00 39.42 6.53
4148 5089 4.935205 TGAACCGAACCATCAAGAATACTG 59.065 41.667 0.00 0.00 0.00 2.74
4153 5094 5.292101 CCGAACCATCAAGAATACTGTCTTC 59.708 44.000 0.00 0.00 35.63 2.87
4189 5137 1.448540 GATCTGACCGTGGCTGGTG 60.449 63.158 6.72 0.00 44.01 4.17
4190 5138 3.612247 ATCTGACCGTGGCTGGTGC 62.612 63.158 6.72 0.60 44.01 5.01
4200 5148 4.626081 GCTGGTGCCTGGTGACGT 62.626 66.667 0.00 0.00 0.00 4.34
4201 5149 2.111043 CTGGTGCCTGGTGACGTT 59.889 61.111 0.00 0.00 0.00 3.99
4202 5150 2.203139 TGGTGCCTGGTGACGTTG 60.203 61.111 0.00 0.00 0.00 4.10
4203 5151 2.203153 GGTGCCTGGTGACGTTGT 60.203 61.111 0.00 0.00 0.00 3.32
4204 5152 2.542907 GGTGCCTGGTGACGTTGTG 61.543 63.158 0.00 0.00 0.00 3.33
4205 5153 2.899838 TGCCTGGTGACGTTGTGC 60.900 61.111 0.00 0.00 0.00 4.57
4206 5154 3.660111 GCCTGGTGACGTTGTGCC 61.660 66.667 0.00 0.00 0.00 5.01
4207 5155 2.111043 CCTGGTGACGTTGTGCCT 59.889 61.111 0.00 0.00 0.00 4.75
4208 5156 2.253758 CCTGGTGACGTTGTGCCTG 61.254 63.158 0.00 0.00 0.00 4.85
4209 5157 2.203139 TGGTGACGTTGTGCCTGG 60.203 61.111 0.00 0.00 0.00 4.45
4210 5158 3.660111 GGTGACGTTGTGCCTGGC 61.660 66.667 12.87 12.87 0.00 4.85
4282 5251 2.186076 GCTACCATATCGTATCAGCGC 58.814 52.381 0.00 0.00 0.00 5.92
4288 5257 1.223417 TATCGTATCAGCGCCGTCGA 61.223 55.000 2.29 8.52 38.10 4.20
4307 5276 2.669113 CGACGGTTTTCACGATAGGACA 60.669 50.000 0.00 0.00 43.77 4.02
4315 5285 4.569761 TTCACGATAGGACATCTGTAGC 57.430 45.455 0.00 0.00 43.77 3.58
4321 5291 1.504912 AGGACATCTGTAGCTGGCAT 58.495 50.000 0.00 0.00 0.00 4.40
4346 5316 2.163412 CGATAGGATCCTCTGCAGTAGC 59.837 54.545 20.22 0.00 42.57 3.58
4347 5317 1.610363 TAGGATCCTCTGCAGTAGCG 58.390 55.000 20.22 4.82 46.23 4.26
4348 5318 1.300542 GGATCCTCTGCAGTAGCGC 60.301 63.158 14.67 0.00 46.23 5.92
4349 5319 1.439228 GATCCTCTGCAGTAGCGCA 59.561 57.895 14.67 0.00 46.23 6.09
4350 5320 0.873743 GATCCTCTGCAGTAGCGCAC 60.874 60.000 14.67 5.97 46.23 5.34
4352 5322 2.262603 CTCTGCAGTAGCGCACCA 59.737 61.111 14.67 0.00 46.23 4.17
4353 5323 1.153489 CTCTGCAGTAGCGCACCAT 60.153 57.895 14.67 0.00 46.23 3.55
4355 5325 1.448365 CTGCAGTAGCGCACCATGA 60.448 57.895 11.47 0.00 46.23 3.07
4356 5326 1.003959 TGCAGTAGCGCACCATGAA 60.004 52.632 11.47 0.00 46.23 2.57
4357 5327 1.020861 TGCAGTAGCGCACCATGAAG 61.021 55.000 11.47 0.00 46.23 3.02
4358 5328 1.021390 GCAGTAGCGCACCATGAAGT 61.021 55.000 11.47 0.00 0.00 3.01
4359 5329 1.739035 GCAGTAGCGCACCATGAAGTA 60.739 52.381 11.47 0.00 0.00 2.24
4360 5330 2.826428 CAGTAGCGCACCATGAAGTAT 58.174 47.619 11.47 0.00 0.00 2.12
4363 5333 3.637229 AGTAGCGCACCATGAAGTATAGT 59.363 43.478 11.47 0.00 0.00 2.12
4365 5335 2.430694 AGCGCACCATGAAGTATAGTCA 59.569 45.455 11.47 0.00 0.00 3.41
4366 5336 2.540101 GCGCACCATGAAGTATAGTCAC 59.460 50.000 0.30 0.00 0.00 3.67
4367 5337 3.738281 GCGCACCATGAAGTATAGTCACT 60.738 47.826 0.30 0.00 0.00 3.41
4369 5339 4.678044 CGCACCATGAAGTATAGTCACTGT 60.678 45.833 0.00 0.00 0.00 3.55
4370 5340 4.806247 GCACCATGAAGTATAGTCACTGTC 59.194 45.833 0.00 0.00 0.00 3.51
4372 5342 6.577103 CACCATGAAGTATAGTCACTGTCAT 58.423 40.000 0.00 0.00 31.91 3.06
4373 5343 6.478016 CACCATGAAGTATAGTCACTGTCATG 59.522 42.308 10.41 10.41 39.92 3.07
4374 5344 6.155221 ACCATGAAGTATAGTCACTGTCATGT 59.845 38.462 14.07 4.63 39.38 3.21
4375 5345 6.478016 CCATGAAGTATAGTCACTGTCATGTG 59.522 42.308 14.07 6.14 39.38 3.21
4376 5346 5.965922 TGAAGTATAGTCACTGTCATGTGG 58.034 41.667 0.00 0.00 38.40 4.17
4377 5347 5.714806 TGAAGTATAGTCACTGTCATGTGGA 59.285 40.000 0.00 0.00 38.40 4.02
4379 5349 3.895232 ATAGTCACTGTCATGTGGACC 57.105 47.619 0.00 0.00 46.38 4.46
4380 5350 0.687354 AGTCACTGTCATGTGGACCC 59.313 55.000 0.00 0.00 46.38 4.46
4381 5351 0.670546 GTCACTGTCATGTGGACCCG 60.671 60.000 0.00 0.00 46.38 5.28
4382 5352 1.375908 CACTGTCATGTGGACCCGG 60.376 63.158 0.00 0.00 46.38 5.73
4383 5353 2.268920 CTGTCATGTGGACCCGGG 59.731 66.667 22.25 22.25 46.38 5.73
4384 5354 3.976701 CTGTCATGTGGACCCGGGC 62.977 68.421 24.08 13.95 46.38 6.13
4385 5355 4.796495 GTCATGTGGACCCGGGCC 62.796 72.222 24.08 23.32 40.83 5.80
4393 5363 4.796495 GACCCGGGCCCACATGTC 62.796 72.222 24.08 17.56 0.00 3.06
4395 5365 4.127744 CCCGGGCCCACATGTCAT 62.128 66.667 24.92 0.00 0.00 3.06
4396 5366 2.516930 CCGGGCCCACATGTCATC 60.517 66.667 24.92 0.00 0.00 2.92
4397 5367 2.516930 CGGGCCCACATGTCATCC 60.517 66.667 24.92 0.00 0.00 3.51
4398 5368 2.516930 GGGCCCACATGTCATCCG 60.517 66.667 19.95 0.00 0.00 4.18
4399 5369 3.211963 GGCCCACATGTCATCCGC 61.212 66.667 0.00 0.00 0.00 5.54
4400 5370 2.438254 GCCCACATGTCATCCGCA 60.438 61.111 0.00 0.00 0.00 5.69
4401 5371 2.764314 GCCCACATGTCATCCGCAC 61.764 63.158 0.00 0.00 0.00 5.34
4402 5372 1.078214 CCCACATGTCATCCGCACT 60.078 57.895 0.00 0.00 0.00 4.40
4403 5373 0.177836 CCCACATGTCATCCGCACTA 59.822 55.000 0.00 0.00 0.00 2.74
4404 5374 1.290203 CCACATGTCATCCGCACTAC 58.710 55.000 0.00 0.00 0.00 2.73
4405 5375 1.405391 CCACATGTCATCCGCACTACA 60.405 52.381 0.00 0.00 0.00 2.74
4406 5376 2.345876 CACATGTCATCCGCACTACAA 58.654 47.619 0.00 0.00 0.00 2.41
4407 5377 2.094258 CACATGTCATCCGCACTACAAC 59.906 50.000 0.00 0.00 0.00 3.32
4408 5378 2.289382 ACATGTCATCCGCACTACAACA 60.289 45.455 0.00 0.00 0.00 3.33
4409 5379 2.760634 TGTCATCCGCACTACAACAT 57.239 45.000 0.00 0.00 0.00 2.71
4410 5380 2.616960 TGTCATCCGCACTACAACATC 58.383 47.619 0.00 0.00 0.00 3.06
4411 5381 2.028567 TGTCATCCGCACTACAACATCA 60.029 45.455 0.00 0.00 0.00 3.07
4412 5382 3.198068 GTCATCCGCACTACAACATCAT 58.802 45.455 0.00 0.00 0.00 2.45
4413 5383 4.142049 TGTCATCCGCACTACAACATCATA 60.142 41.667 0.00 0.00 0.00 2.15
4414 5384 4.445718 GTCATCCGCACTACAACATCATAG 59.554 45.833 0.00 0.00 0.00 2.23
4415 5385 4.340950 TCATCCGCACTACAACATCATAGA 59.659 41.667 0.00 0.00 0.00 1.98
4416 5386 4.307443 TCCGCACTACAACATCATAGAG 57.693 45.455 0.00 0.00 0.00 2.43
4417 5387 3.699538 TCCGCACTACAACATCATAGAGT 59.300 43.478 0.00 0.00 0.00 3.24
4418 5388 4.885325 TCCGCACTACAACATCATAGAGTA 59.115 41.667 0.00 0.00 0.00 2.59
4419 5389 4.976731 CCGCACTACAACATCATAGAGTAC 59.023 45.833 0.00 0.00 0.00 2.73
4420 5390 5.221067 CCGCACTACAACATCATAGAGTACT 60.221 44.000 0.00 0.00 0.00 2.73
4421 5391 5.683302 CGCACTACAACATCATAGAGTACTG 59.317 44.000 0.00 0.00 0.00 2.74
4422 5392 5.460419 GCACTACAACATCATAGAGTACTGC 59.540 44.000 0.00 0.00 0.00 4.40
4423 5393 6.564328 CACTACAACATCATAGAGTACTGCA 58.436 40.000 0.00 0.00 0.00 4.41
4424 5394 6.694844 CACTACAACATCATAGAGTACTGCAG 59.305 42.308 13.48 13.48 0.00 4.41
4425 5395 5.921962 ACAACATCATAGAGTACTGCAGA 57.078 39.130 23.35 0.48 0.00 4.26
4426 5396 5.900425 ACAACATCATAGAGTACTGCAGAG 58.100 41.667 23.35 0.00 0.00 3.35
4427 5397 5.163468 ACAACATCATAGAGTACTGCAGAGG 60.163 44.000 23.35 0.00 0.00 3.69
4428 5398 4.797743 ACATCATAGAGTACTGCAGAGGA 58.202 43.478 23.35 3.91 0.00 3.71
4429 5399 5.392995 ACATCATAGAGTACTGCAGAGGAT 58.607 41.667 23.35 6.44 0.00 3.24
4430 5400 5.476599 ACATCATAGAGTACTGCAGAGGATC 59.523 44.000 23.35 12.32 0.00 3.36
4460 5430 3.124921 CGCCGGGGTTCATGTGTC 61.125 66.667 11.01 0.00 0.00 3.67
4461 5431 3.124921 GCCGGGGTTCATGTGTCG 61.125 66.667 2.18 0.00 0.00 4.35
4462 5432 3.124921 CCGGGGTTCATGTGTCGC 61.125 66.667 0.00 0.00 0.00 5.19
4463 5433 2.358125 CGGGGTTCATGTGTCGCA 60.358 61.111 0.00 0.00 0.00 5.10
4464 5434 2.677003 CGGGGTTCATGTGTCGCAC 61.677 63.158 0.00 3.44 34.56 5.34
4465 5435 1.302511 GGGGTTCATGTGTCGCACT 60.303 57.895 10.54 0.00 35.11 4.40
4467 5437 0.602638 GGGTTCATGTGTCGCACTGA 60.603 55.000 10.54 8.81 35.11 3.41
4498 5493 1.004277 TGCTGGTTAGATGGTGGTTCC 59.996 52.381 0.00 0.00 0.00 3.62
4499 5494 1.282157 GCTGGTTAGATGGTGGTTCCT 59.718 52.381 0.00 0.00 37.07 3.36
4518 5513 3.236604 GGGTCAAAATCCCGTTCGA 57.763 52.632 0.00 0.00 35.27 3.71
4520 5515 0.441145 GGTCAAAATCCCGTTCGACG 59.559 55.000 0.00 0.00 42.11 5.12
4522 5517 0.320073 TCAAAATCCCGTTCGACGCT 60.320 50.000 0.00 0.00 40.91 5.07
4553 5548 4.685807 TCTCATCCTATCCAGCATCATCT 58.314 43.478 0.00 0.00 0.00 2.90
4581 5576 1.729881 GCAAGATCGGATTGTGCCC 59.270 57.895 13.10 0.00 0.00 5.36
4592 5587 3.425659 GGATTGTGCCCTTTCTTTCTCT 58.574 45.455 0.00 0.00 0.00 3.10
4593 5588 4.589908 GGATTGTGCCCTTTCTTTCTCTA 58.410 43.478 0.00 0.00 0.00 2.43
4626 5621 9.985318 TGTTAAAAGTCTTGCATCAAATTTTTG 57.015 25.926 6.87 0.00 39.48 2.44
4627 5622 9.437045 GTTAAAAGTCTTGCATCAAATTTTTGG 57.563 29.630 3.38 0.00 38.66 3.28
4629 5624 4.067192 AGTCTTGCATCAAATTTTTGGCC 58.933 39.130 0.00 0.00 38.66 5.36
4636 5632 4.333690 CATCAAATTTTTGGCCATTCCCA 58.666 39.130 6.09 0.00 38.66 4.37
4648 5644 0.173255 CATTCCCATTGAACGCCCAC 59.827 55.000 0.00 0.00 35.31 4.61
4651 5647 0.621082 TCCCATTGAACGCCCACATA 59.379 50.000 0.00 0.00 0.00 2.29
4653 5649 2.031120 CCCATTGAACGCCCACATATT 58.969 47.619 0.00 0.00 0.00 1.28
4657 5653 3.840890 TTGAACGCCCACATATTTCAC 57.159 42.857 0.00 0.00 0.00 3.18
4659 5655 1.735571 GAACGCCCACATATTTCACGT 59.264 47.619 0.00 0.00 0.00 4.49
4661 5657 1.338294 ACGCCCACATATTTCACGTGA 60.338 47.619 15.76 15.76 32.23 4.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
58 336 0.978146 AGTGGGGATCGAACTGGGAG 60.978 60.000 0.00 0.00 0.00 4.30
145 514 5.551233 TGTGTAGCCCATTAGATAAGATGC 58.449 41.667 0.00 0.00 0.00 3.91
156 525 5.760484 ATTGGAAAATTGTGTAGCCCATT 57.240 34.783 0.00 0.00 0.00 3.16
420 792 3.701205 AGGCATTTTCAAATTCCCCAC 57.299 42.857 0.00 0.00 32.94 4.61
462 834 8.469200 GGTATCTCCATCAAAAACAATCAATCA 58.531 33.333 0.00 0.00 35.97 2.57
538 911 9.578576 AGAGATAATGCATTAGGCTGAAAATAA 57.421 29.630 22.76 0.00 45.15 1.40
571 945 6.485648 ACCTAAGAAATAATGCATTACCCGTC 59.514 38.462 21.10 14.66 0.00 4.79
598 976 3.485463 TGTGTTGTTCCTCCTTAGTGG 57.515 47.619 0.00 0.00 37.10 4.00
695 1075 9.492730 ACAAATATAAAGGTGGGATGATTTTCT 57.507 29.630 0.00 0.00 0.00 2.52
696 1076 9.533253 CACAAATATAAAGGTGGGATGATTTTC 57.467 33.333 0.00 0.00 0.00 2.29
701 1081 5.359576 GTGCACAAATATAAAGGTGGGATGA 59.640 40.000 13.17 0.00 0.00 2.92
848 1232 7.863901 AGAGCACATCTCCCTTTTATATACT 57.136 36.000 0.00 0.00 42.90 2.12
864 1248 4.217118 GGATTTTGTGTTGAGAGAGCACAT 59.783 41.667 0.00 0.00 41.86 3.21
872 1256 6.653526 ATGAATGTGGATTTTGTGTTGAGA 57.346 33.333 0.00 0.00 0.00 3.27
876 1260 6.349280 CGGAGTATGAATGTGGATTTTGTGTT 60.349 38.462 0.00 0.00 0.00 3.32
885 1269 3.513912 ACTGAACGGAGTATGAATGTGGA 59.486 43.478 0.00 0.00 45.00 4.02
886 1270 3.861840 ACTGAACGGAGTATGAATGTGG 58.138 45.455 0.00 0.00 45.00 4.17
887 1271 4.093408 CCAACTGAACGGAGTATGAATGTG 59.907 45.833 0.00 0.00 45.00 3.21
888 1272 4.253685 CCAACTGAACGGAGTATGAATGT 58.746 43.478 0.00 0.00 45.00 2.71
891 1275 2.901192 TCCCAACTGAACGGAGTATGAA 59.099 45.455 0.00 0.00 45.00 2.57
892 1276 2.531771 TCCCAACTGAACGGAGTATGA 58.468 47.619 0.00 0.00 45.00 2.15
894 1278 5.221661 GGATATTCCCAACTGAACGGAGTAT 60.222 44.000 0.00 0.00 45.00 2.12
895 1279 4.100498 GGATATTCCCAACTGAACGGAGTA 59.900 45.833 0.00 0.00 45.00 2.59
896 1280 5.609588 TGGATATTCCCAACTGAACGGAGT 61.610 45.833 0.00 0.00 38.13 3.85
897 1281 3.118408 TGGATATTCCCAACTGAACGGAG 60.118 47.826 0.00 0.00 35.03 4.63
1083 1471 3.006756 GCTGGCTCTGCTACCGTGA 62.007 63.158 0.00 0.00 0.00 4.35
1332 1723 3.453679 AGGAAGGCCTCGACGAGC 61.454 66.667 19.55 14.03 42.19 5.03
1440 1831 1.002533 TTACGGGAGAGGGAAGGGG 59.997 63.158 0.00 0.00 0.00 4.79
1478 1869 0.621082 GGGAGAGAGGAACCAAAGGG 59.379 60.000 0.00 0.00 41.29 3.95
1565 1956 1.764134 ACTACCGGAGTTGAACACCAA 59.236 47.619 9.46 0.00 33.13 3.67
1597 1988 7.914537 AATGCGCTATCTTTTTACATTTAGC 57.085 32.000 9.73 0.00 0.00 3.09
1599 1990 9.502145 CTCAAATGCGCTATCTTTTTACATTTA 57.498 29.630 9.73 0.00 35.22 1.40
1611 2002 2.208431 AGACTGCTCAAATGCGCTATC 58.792 47.619 9.73 0.00 35.36 2.08
1634 2025 1.673993 CCCATGTAACCGTGCAGCA 60.674 57.895 0.00 0.00 0.00 4.41
1635 2026 0.748005 ATCCCATGTAACCGTGCAGC 60.748 55.000 0.00 0.00 0.00 5.25
1654 2045 3.616956 ATTCGCAATCTCAGGAGACAA 57.383 42.857 0.22 0.00 40.75 3.18
1749 2150 6.806388 TTTTCCATTCCCGAAAGTTACTAC 57.194 37.500 0.00 0.00 31.22 2.73
1750 2151 8.301002 CAAATTTTCCATTCCCGAAAGTTACTA 58.699 33.333 0.00 0.00 31.35 1.82
1751 2152 6.911250 AATTTTCCATTCCCGAAAGTTACT 57.089 33.333 0.00 0.00 30.24 2.24
1782 2183 4.588951 AGAGTACACATCACTTGAGGACAA 59.411 41.667 0.00 0.00 32.56 3.18
1790 2191 2.634940 ACAGCCAGAGTACACATCACTT 59.365 45.455 0.00 0.00 0.00 3.16
1791 2192 2.251818 ACAGCCAGAGTACACATCACT 58.748 47.619 0.00 0.00 0.00 3.41
1793 2194 2.632512 TCAACAGCCAGAGTACACATCA 59.367 45.455 0.00 0.00 0.00 3.07
1810 2211 4.428294 TCTCCCATGGATCAATCTCAAC 57.572 45.455 15.22 0.00 0.00 3.18
1880 2281 1.135603 CACAATCCGTTCTGCCACATG 60.136 52.381 0.00 0.00 0.00 3.21
1887 2288 3.253188 ACAACCATTCACAATCCGTTCTG 59.747 43.478 0.00 0.00 0.00 3.02
1892 2293 3.073678 TCTGACAACCATTCACAATCCG 58.926 45.455 0.00 0.00 0.00 4.18
1928 2333 2.960819 CCAGGACTATTGGCTATACGC 58.039 52.381 0.00 0.00 38.13 4.42
1981 2386 1.694696 GGGCAGGTACTAGGGAAGATG 59.305 57.143 0.00 0.00 36.02 2.90
1995 2400 0.753111 GCCTATGAAACAGGGGCAGG 60.753 60.000 0.00 0.00 42.08 4.85
1999 2404 0.631212 AAGGGCCTATGAAACAGGGG 59.369 55.000 6.41 0.00 33.44 4.79
2145 2557 3.071312 TCAAGTGAAAATGCAAGGCCAAT 59.929 39.130 5.01 0.00 0.00 3.16
2181 2593 5.760253 ACCTTCGGCTATAAGAATCACATTG 59.240 40.000 0.00 0.00 0.00 2.82
2359 2771 5.766174 AGGGTTAAACTAAAGAATGCAACGA 59.234 36.000 0.00 0.00 0.00 3.85
2383 2795 8.271458 TGATGGAAGTATCATAACAAAGGCTAA 58.729 33.333 0.00 0.00 32.39 3.09
2386 2798 6.942532 TGATGGAAGTATCATAACAAAGGC 57.057 37.500 0.00 0.00 32.39 4.35
2418 2831 7.341445 TGGGTAAATGATAAACCAACATAGC 57.659 36.000 0.00 0.00 34.83 2.97
2473 2889 1.351017 GATGACACACCCCTGGAGAAA 59.649 52.381 0.00 0.00 0.00 2.52
2631 3047 9.047947 ACTCTTATATTTGTTTACAGAGGGAGT 57.952 33.333 0.00 0.00 0.00 3.85
2648 3064 9.509956 AGAGCGTTTAGATCACTACTCTTATAT 57.490 33.333 0.00 0.00 37.82 0.86
2649 3065 8.905660 AGAGCGTTTAGATCACTACTCTTATA 57.094 34.615 0.00 0.00 37.82 0.98
2650 3066 7.811117 AGAGCGTTTAGATCACTACTCTTAT 57.189 36.000 0.00 0.00 37.82 1.73
2651 3067 7.120873 ACAAGAGCGTTTAGATCACTACTCTTA 59.879 37.037 12.43 0.00 36.80 2.10
2652 3068 6.071840 ACAAGAGCGTTTAGATCACTACTCTT 60.072 38.462 0.00 2.97 38.09 2.85
2653 3069 5.416326 ACAAGAGCGTTTAGATCACTACTCT 59.584 40.000 0.00 0.00 37.82 3.24
2654 3070 5.642686 ACAAGAGCGTTTAGATCACTACTC 58.357 41.667 0.00 0.00 37.82 2.59
2655 3071 5.646577 ACAAGAGCGTTTAGATCACTACT 57.353 39.130 0.00 0.00 37.82 2.57
2656 3072 7.988904 AATACAAGAGCGTTTAGATCACTAC 57.011 36.000 0.00 0.00 37.82 2.73
2657 3073 8.467598 AGAAATACAAGAGCGTTTAGATCACTA 58.532 33.333 0.00 0.00 37.82 2.74
2658 3074 7.324178 AGAAATACAAGAGCGTTTAGATCACT 58.676 34.615 0.00 0.00 37.82 3.41
2659 3075 7.527084 AGAAATACAAGAGCGTTTAGATCAC 57.473 36.000 0.00 0.00 37.82 3.06
2660 3076 8.547967 AAAGAAATACAAGAGCGTTTAGATCA 57.452 30.769 0.00 0.00 37.82 2.92
2661 3077 9.903185 GTAAAGAAATACAAGAGCGTTTAGATC 57.097 33.333 0.00 0.00 35.01 2.75
2662 3078 8.592998 CGTAAAGAAATACAAGAGCGTTTAGAT 58.407 33.333 0.00 0.00 0.00 1.98
2663 3079 7.062605 CCGTAAAGAAATACAAGAGCGTTTAGA 59.937 37.037 0.00 0.00 0.00 2.10
2664 3080 7.062605 TCCGTAAAGAAATACAAGAGCGTTTAG 59.937 37.037 0.00 0.00 0.00 1.85
2665 3081 6.867816 TCCGTAAAGAAATACAAGAGCGTTTA 59.132 34.615 0.00 0.00 0.00 2.01
2666 3082 5.697633 TCCGTAAAGAAATACAAGAGCGTTT 59.302 36.000 0.00 0.00 0.00 3.60
2667 3083 5.232463 TCCGTAAAGAAATACAAGAGCGTT 58.768 37.500 0.00 0.00 0.00 4.84
2668 3084 4.813027 TCCGTAAAGAAATACAAGAGCGT 58.187 39.130 0.00 0.00 0.00 5.07
2669 3085 4.267928 CCTCCGTAAAGAAATACAAGAGCG 59.732 45.833 0.00 0.00 30.25 5.03
2670 3086 4.571176 CCCTCCGTAAAGAAATACAAGAGC 59.429 45.833 0.00 0.00 30.25 4.09
2671 3087 5.974108 TCCCTCCGTAAAGAAATACAAGAG 58.026 41.667 0.00 0.00 0.00 2.85
2672 3088 5.482878 ACTCCCTCCGTAAAGAAATACAAGA 59.517 40.000 0.00 0.00 0.00 3.02
2673 3089 5.731591 ACTCCCTCCGTAAAGAAATACAAG 58.268 41.667 0.00 0.00 0.00 3.16
2674 3090 5.750352 ACTCCCTCCGTAAAGAAATACAA 57.250 39.130 0.00 0.00 0.00 2.41
2675 3091 6.855763 TTACTCCCTCCGTAAAGAAATACA 57.144 37.500 0.00 0.00 0.00 2.29
2676 3092 9.822185 TTTATTACTCCCTCCGTAAAGAAATAC 57.178 33.333 0.00 0.00 31.36 1.89
2680 3096 8.645110 CCTATTTATTACTCCCTCCGTAAAGAA 58.355 37.037 0.00 0.00 31.36 2.52
2681 3097 7.786464 ACCTATTTATTACTCCCTCCGTAAAGA 59.214 37.037 0.00 0.00 31.36 2.52
2682 3098 7.960262 ACCTATTTATTACTCCCTCCGTAAAG 58.040 38.462 0.00 0.00 31.36 1.85
2683 3099 7.919385 ACCTATTTATTACTCCCTCCGTAAA 57.081 36.000 0.00 0.00 31.36 2.01
2742 3158 1.827789 GCAAACCCTGGAGCACACA 60.828 57.895 0.00 0.00 0.00 3.72
2874 3290 7.907389 ACTTTAGAGGTTCTCATATGTGTTCA 58.093 34.615 1.90 0.00 32.06 3.18
2906 3322 5.300752 CGCTCCAGGATATTGACAAACTAT 58.699 41.667 0.00 0.00 0.00 2.12
2907 3323 4.693283 CGCTCCAGGATATTGACAAACTA 58.307 43.478 0.00 0.00 0.00 2.24
2955 3496 0.580578 CAGAATCTGCCAATCGAGCG 59.419 55.000 0.00 0.00 0.00 5.03
3037 3579 1.600023 CGGTGTTCCAGCTTAAACCA 58.400 50.000 5.70 0.00 0.00 3.67
3058 3605 4.273235 GCTGGCTTGTGTTTTTGCTATTTT 59.727 37.500 0.00 0.00 0.00 1.82
3087 3635 2.034687 CAGGACAGGCAAGGTGGG 59.965 66.667 0.00 0.00 0.00 4.61
3129 3677 3.116096 AGTGCTCCTGAGGTGGTATTA 57.884 47.619 0.00 0.00 0.00 0.98
3288 3842 3.494924 CCGCCATCTTTGATATCTCACCA 60.495 47.826 3.98 0.00 0.00 4.17
3314 3868 0.240945 GACTGAATTGCCAACCACCG 59.759 55.000 0.00 0.00 0.00 4.94
3317 3871 1.881925 CGGAGACTGAATTGCCAACCA 60.882 52.381 0.00 0.00 0.00 3.67
3321 3875 0.976641 ACTCGGAGACTGAATTGCCA 59.023 50.000 12.86 0.00 0.00 4.92
3454 4008 3.498397 AGCGACAACAAACGATTCAAGAT 59.502 39.130 0.00 0.00 0.00 2.40
3580 4135 3.077907 CCTCCGGGCTGAAGGAAA 58.922 61.111 0.00 0.00 35.90 3.13
3707 4267 3.697045 TGGTTCCAACATATAAAAGGCGG 59.303 43.478 0.00 0.00 0.00 6.13
3744 4305 0.179084 TCTGTACAATAGCCAGCCGC 60.179 55.000 0.00 0.00 37.98 6.53
3745 4306 1.134818 TGTCTGTACAATAGCCAGCCG 60.135 52.381 0.00 0.00 30.91 5.52
3746 4307 2.555199 CTGTCTGTACAATAGCCAGCC 58.445 52.381 0.00 0.00 34.49 4.85
3747 4308 1.936547 GCTGTCTGTACAATAGCCAGC 59.063 52.381 12.30 12.62 34.49 4.85
3748 4309 3.193263 CTGCTGTCTGTACAATAGCCAG 58.807 50.000 17.78 12.92 34.49 4.85
3749 4310 2.677902 GCTGCTGTCTGTACAATAGCCA 60.678 50.000 17.78 9.03 38.08 4.75
3750 4311 1.936547 GCTGCTGTCTGTACAATAGCC 59.063 52.381 17.78 5.27 38.08 3.93
3751 4312 1.936547 GGCTGCTGTCTGTACAATAGC 59.063 52.381 15.12 15.12 40.91 2.97
3752 4313 2.169352 AGGGCTGCTGTCTGTACAATAG 59.831 50.000 0.00 0.00 34.49 1.73
3753 4314 2.093500 CAGGGCTGCTGTCTGTACAATA 60.093 50.000 0.00 0.00 34.49 1.90
3785 4346 3.841642 GGATACTACTGTCGACCGC 57.158 57.895 14.12 0.00 0.00 5.68
3802 4363 4.944317 GGGTTCCATAGAAGAACAAAGAGG 59.056 45.833 6.04 0.00 44.40 3.69
3803 4364 4.944317 GGGGTTCCATAGAAGAACAAAGAG 59.056 45.833 6.04 0.00 44.40 2.85
3804 4365 4.564821 CGGGGTTCCATAGAAGAACAAAGA 60.565 45.833 6.04 0.00 44.40 2.52
3805 4366 3.689649 CGGGGTTCCATAGAAGAACAAAG 59.310 47.826 6.04 0.00 44.40 2.77
3853 4414 9.199982 CGAAATCACTAACCAGTAAAAAGAGTA 57.800 33.333 0.00 0.00 32.21 2.59
3854 4415 7.172703 CCGAAATCACTAACCAGTAAAAAGAGT 59.827 37.037 0.00 0.00 32.21 3.24
3855 4416 7.386848 TCCGAAATCACTAACCAGTAAAAAGAG 59.613 37.037 0.00 0.00 32.21 2.85
3856 4417 7.218614 TCCGAAATCACTAACCAGTAAAAAGA 58.781 34.615 0.00 0.00 32.21 2.52
3857 4418 7.429636 TCCGAAATCACTAACCAGTAAAAAG 57.570 36.000 0.00 0.00 32.21 2.27
3860 4421 6.527423 AGTTCCGAAATCACTAACCAGTAAA 58.473 36.000 0.00 0.00 32.21 2.01
3861 4422 6.105397 AGTTCCGAAATCACTAACCAGTAA 57.895 37.500 0.00 0.00 32.21 2.24
3862 4423 5.244402 TGAGTTCCGAAATCACTAACCAGTA 59.756 40.000 7.17 0.00 32.21 2.74
3863 4424 4.039973 TGAGTTCCGAAATCACTAACCAGT 59.960 41.667 7.17 0.00 34.42 4.00
3864 4425 4.566004 TGAGTTCCGAAATCACTAACCAG 58.434 43.478 7.17 0.00 0.00 4.00
3865 4426 4.610605 TGAGTTCCGAAATCACTAACCA 57.389 40.909 7.17 0.00 0.00 3.67
3866 4427 5.292101 CAGATGAGTTCCGAAATCACTAACC 59.708 44.000 13.17 2.14 0.00 2.85
3867 4428 6.100004 TCAGATGAGTTCCGAAATCACTAAC 58.900 40.000 13.17 6.21 0.00 2.34
3868 4429 6.280855 TCAGATGAGTTCCGAAATCACTAA 57.719 37.500 13.17 0.00 0.00 2.24
3869 4430 5.914898 TCAGATGAGTTCCGAAATCACTA 57.085 39.130 13.17 0.00 0.00 2.74
3870 4431 4.808414 TCAGATGAGTTCCGAAATCACT 57.192 40.909 13.17 9.79 0.00 3.41
3871 4432 4.208047 CGATCAGATGAGTTCCGAAATCAC 59.792 45.833 13.17 7.91 0.00 3.06
3872 4433 4.142160 ACGATCAGATGAGTTCCGAAATCA 60.142 41.667 13.26 13.26 0.00 2.57
3873 4434 4.363999 ACGATCAGATGAGTTCCGAAATC 58.636 43.478 1.55 1.55 0.00 2.17
3874 4435 4.392921 ACGATCAGATGAGTTCCGAAAT 57.607 40.909 0.00 0.00 0.00 2.17
3875 4436 3.868757 ACGATCAGATGAGTTCCGAAA 57.131 42.857 0.00 0.00 0.00 3.46
3876 4437 3.868757 AACGATCAGATGAGTTCCGAA 57.131 42.857 0.00 0.00 0.00 4.30
3877 4438 3.511699 CAAACGATCAGATGAGTTCCGA 58.488 45.455 0.00 0.00 0.00 4.55
3878 4439 2.604914 CCAAACGATCAGATGAGTTCCG 59.395 50.000 0.00 0.00 0.00 4.30
3879 4440 2.352960 GCCAAACGATCAGATGAGTTCC 59.647 50.000 0.00 0.00 0.00 3.62
3880 4441 3.265791 AGCCAAACGATCAGATGAGTTC 58.734 45.455 0.00 0.00 0.00 3.01
3881 4442 3.340814 AGCCAAACGATCAGATGAGTT 57.659 42.857 0.00 0.00 0.00 3.01
3882 4443 3.340814 AAGCCAAACGATCAGATGAGT 57.659 42.857 0.00 0.00 0.00 3.41
3883 4444 4.691860 AAAAGCCAAACGATCAGATGAG 57.308 40.909 0.00 0.00 0.00 2.90
3884 4445 7.857734 TTATAAAAGCCAAACGATCAGATGA 57.142 32.000 0.00 0.00 0.00 2.92
3885 4446 8.344831 TGATTATAAAAGCCAAACGATCAGATG 58.655 33.333 0.00 0.00 0.00 2.90
3886 4447 8.450578 TGATTATAAAAGCCAAACGATCAGAT 57.549 30.769 0.00 0.00 0.00 2.90
3887 4448 7.857734 TGATTATAAAAGCCAAACGATCAGA 57.142 32.000 0.00 0.00 0.00 3.27
3888 4449 8.184192 ACTTGATTATAAAAGCCAAACGATCAG 58.816 33.333 0.00 0.00 0.00 2.90
3889 4450 7.967854 CACTTGATTATAAAAGCCAAACGATCA 59.032 33.333 0.00 0.00 0.00 2.92
3890 4451 7.968405 ACACTTGATTATAAAAGCCAAACGATC 59.032 33.333 0.00 0.00 0.00 3.69
3891 4452 7.826690 ACACTTGATTATAAAAGCCAAACGAT 58.173 30.769 0.00 0.00 0.00 3.73
3892 4453 7.209471 ACACTTGATTATAAAAGCCAAACGA 57.791 32.000 0.00 0.00 0.00 3.85
3893 4454 7.867445 AACACTTGATTATAAAAGCCAAACG 57.133 32.000 0.00 0.00 0.00 3.60
3894 4455 9.255304 TGAAACACTTGATTATAAAAGCCAAAC 57.745 29.630 0.00 0.00 0.00 2.93
3895 4456 9.255304 GTGAAACACTTGATTATAAAAGCCAAA 57.745 29.630 0.00 0.00 36.32 3.28
3896 4457 7.870445 GGTGAAACACTTGATTATAAAAGCCAA 59.130 33.333 0.00 0.00 39.98 4.52
3897 4458 7.014711 TGGTGAAACACTTGATTATAAAAGCCA 59.985 33.333 0.00 0.00 39.98 4.75
3898 4459 7.328493 GTGGTGAAACACTTGATTATAAAAGCC 59.672 37.037 0.00 0.00 39.98 4.35
3899 4460 7.328493 GGTGGTGAAACACTTGATTATAAAAGC 59.672 37.037 0.00 0.00 41.09 3.51
3900 4461 8.356657 TGGTGGTGAAACACTTGATTATAAAAG 58.643 33.333 0.00 0.00 41.09 2.27
3901 4462 8.239038 TGGTGGTGAAACACTTGATTATAAAA 57.761 30.769 0.00 0.00 41.09 1.52
3902 4463 7.825331 TGGTGGTGAAACACTTGATTATAAA 57.175 32.000 0.00 0.00 41.09 1.40
3903 4464 7.148323 CGATGGTGGTGAAACACTTGATTATAA 60.148 37.037 0.00 0.00 41.09 0.98
3904 4465 6.315144 CGATGGTGGTGAAACACTTGATTATA 59.685 38.462 0.00 0.00 41.09 0.98
3905 4466 5.123820 CGATGGTGGTGAAACACTTGATTAT 59.876 40.000 0.00 0.00 41.09 1.28
3906 4467 4.454161 CGATGGTGGTGAAACACTTGATTA 59.546 41.667 0.00 0.00 41.09 1.75
3907 4468 3.253188 CGATGGTGGTGAAACACTTGATT 59.747 43.478 0.00 0.00 41.09 2.57
3908 4469 2.813754 CGATGGTGGTGAAACACTTGAT 59.186 45.455 0.00 0.00 41.09 2.57
3909 4470 2.217750 CGATGGTGGTGAAACACTTGA 58.782 47.619 0.00 0.00 41.09 3.02
3910 4471 1.946768 ACGATGGTGGTGAAACACTTG 59.053 47.619 0.00 0.00 41.09 3.16
3911 4472 2.341846 ACGATGGTGGTGAAACACTT 57.658 45.000 0.00 0.00 41.09 3.16
3912 4473 2.341846 AACGATGGTGGTGAAACACT 57.658 45.000 0.00 0.00 41.09 3.55
3913 4474 3.749088 TCATAACGATGGTGGTGAAACAC 59.251 43.478 0.00 0.00 40.60 3.32
3914 4475 3.749088 GTCATAACGATGGTGGTGAAACA 59.251 43.478 0.00 0.00 33.81 2.83
3915 4476 3.126343 GGTCATAACGATGGTGGTGAAAC 59.874 47.826 0.00 0.00 33.49 2.78
3916 4477 3.244596 TGGTCATAACGATGGTGGTGAAA 60.245 43.478 0.00 0.00 33.49 2.69
3917 4478 2.303311 TGGTCATAACGATGGTGGTGAA 59.697 45.455 0.00 0.00 33.49 3.18
3918 4479 1.903183 TGGTCATAACGATGGTGGTGA 59.097 47.619 0.00 0.00 33.49 4.02
3919 4480 2.279741 CTGGTCATAACGATGGTGGTG 58.720 52.381 0.00 0.00 33.49 4.17
3920 4481 1.406887 GCTGGTCATAACGATGGTGGT 60.407 52.381 0.00 0.00 33.49 4.16
3921 4482 1.299541 GCTGGTCATAACGATGGTGG 58.700 55.000 0.00 0.00 33.49 4.61
3922 4483 0.930310 CGCTGGTCATAACGATGGTG 59.070 55.000 0.00 0.00 33.49 4.17
3923 4484 0.821517 TCGCTGGTCATAACGATGGT 59.178 50.000 0.00 0.00 33.49 3.55
3924 4485 2.154854 ATCGCTGGTCATAACGATGG 57.845 50.000 0.00 0.00 43.13 3.51
3925 4486 4.274069 CAAAATCGCTGGTCATAACGATG 58.726 43.478 0.00 0.00 43.91 3.84
3926 4487 3.312421 CCAAAATCGCTGGTCATAACGAT 59.688 43.478 0.00 0.00 46.43 3.73
3927 4488 2.675844 CCAAAATCGCTGGTCATAACGA 59.324 45.455 0.00 0.00 39.11 3.85
3928 4489 2.675844 TCCAAAATCGCTGGTCATAACG 59.324 45.455 0.00 0.00 35.30 3.18
3929 4490 3.485216 CGTCCAAAATCGCTGGTCATAAC 60.485 47.826 0.00 0.00 35.30 1.89
3930 4491 2.675844 CGTCCAAAATCGCTGGTCATAA 59.324 45.455 0.00 0.00 35.30 1.90
3931 4492 2.276201 CGTCCAAAATCGCTGGTCATA 58.724 47.619 0.00 0.00 35.30 2.15
3932 4493 1.086696 CGTCCAAAATCGCTGGTCAT 58.913 50.000 0.00 0.00 35.30 3.06
3933 4494 0.250124 ACGTCCAAAATCGCTGGTCA 60.250 50.000 0.00 0.00 35.30 4.02
3934 4495 1.659098 CTACGTCCAAAATCGCTGGTC 59.341 52.381 0.00 0.00 35.30 4.02
3935 4496 1.274167 TCTACGTCCAAAATCGCTGGT 59.726 47.619 0.00 0.00 35.30 4.00
3936 4497 2.004583 TCTACGTCCAAAATCGCTGG 57.995 50.000 0.00 0.00 35.05 4.85
3937 4498 3.616821 TCAATCTACGTCCAAAATCGCTG 59.383 43.478 0.00 0.00 0.00 5.18
3938 4499 3.857052 TCAATCTACGTCCAAAATCGCT 58.143 40.909 0.00 0.00 0.00 4.93
3939 4500 4.518217 CATCAATCTACGTCCAAAATCGC 58.482 43.478 0.00 0.00 0.00 4.58
3940 4501 4.024893 CCCATCAATCTACGTCCAAAATCG 60.025 45.833 0.00 0.00 0.00 3.34
3941 4502 5.123227 TCCCATCAATCTACGTCCAAAATC 58.877 41.667 0.00 0.00 0.00 2.17
3942 4503 5.110814 TCCCATCAATCTACGTCCAAAAT 57.889 39.130 0.00 0.00 0.00 1.82
3995 4556 2.028420 TGGAACAGCTGATTGATCGG 57.972 50.000 23.35 0.00 36.26 4.18
4013 4574 2.554032 CCTGAGGTGGCACTAAAAACTG 59.446 50.000 18.45 6.82 0.00 3.16
4053 4614 1.614413 ACTGACGGAAGAGAACAGGAC 59.386 52.381 0.00 0.00 33.57 3.85
4054 4615 1.887198 GACTGACGGAAGAGAACAGGA 59.113 52.381 0.00 0.00 33.57 3.86
4055 4616 1.889829 AGACTGACGGAAGAGAACAGG 59.110 52.381 0.00 0.00 33.57 4.00
4056 4617 2.294791 ACAGACTGACGGAAGAGAACAG 59.705 50.000 10.08 0.00 35.14 3.16
4057 4618 2.293677 GACAGACTGACGGAAGAGAACA 59.706 50.000 10.08 0.00 0.00 3.18
4058 4619 2.666069 CGACAGACTGACGGAAGAGAAC 60.666 54.545 17.78 0.00 32.33 3.01
4060 4621 1.157585 CGACAGACTGACGGAAGAGA 58.842 55.000 17.78 0.00 32.33 3.10
4061 4622 0.455295 GCGACAGACTGACGGAAGAG 60.455 60.000 24.66 1.02 36.16 2.85
4062 4623 1.579932 GCGACAGACTGACGGAAGA 59.420 57.895 24.66 0.00 36.16 2.87
4063 4624 1.797933 CGCGACAGACTGACGGAAG 60.798 63.158 24.66 2.00 36.16 3.46
4064 4625 2.254350 CGCGACAGACTGACGGAA 59.746 61.111 24.66 0.00 36.16 4.30
4098 4659 2.032681 AGGGAACAACTCAGCCGC 59.967 61.111 0.00 0.00 0.00 6.53
4099 4660 0.036010 ATCAGGGAACAACTCAGCCG 60.036 55.000 0.00 0.00 0.00 5.52
4148 5089 2.717809 GACGCGACGGCAAGAAGAC 61.718 63.158 15.93 0.00 39.92 3.01
4188 5136 2.899838 GCACAACGTCACCAGGCA 60.900 61.111 0.00 0.00 0.00 4.75
4189 5137 3.660111 GGCACAACGTCACCAGGC 61.660 66.667 0.00 0.00 0.00 4.85
4190 5138 2.111043 AGGCACAACGTCACCAGG 59.889 61.111 0.00 0.00 0.00 4.45
4191 5139 2.253758 CCAGGCACAACGTCACCAG 61.254 63.158 0.00 0.00 0.00 4.00
4192 5140 2.203139 CCAGGCACAACGTCACCA 60.203 61.111 0.00 0.00 0.00 4.17
4193 5141 3.660111 GCCAGGCACAACGTCACC 61.660 66.667 6.55 0.00 0.00 4.02
4194 5142 2.591715 AGCCAGGCACAACGTCAC 60.592 61.111 15.80 0.00 0.00 3.67
4195 5143 2.591429 CAGCCAGGCACAACGTCA 60.591 61.111 15.80 0.00 0.00 4.35
4196 5144 4.030452 GCAGCCAGGCACAACGTC 62.030 66.667 15.80 0.00 0.00 4.34
4205 5153 4.767255 GACGGACAGGCAGCCAGG 62.767 72.222 15.80 8.00 0.00 4.45
4206 5154 4.767255 GGACGGACAGGCAGCCAG 62.767 72.222 15.80 8.60 0.00 4.85
4288 5257 3.194968 AGATGTCCTATCGTGAAAACCGT 59.805 43.478 0.00 0.00 0.00 4.83
4307 5276 4.894201 GCCATGCCAGCTACAGAT 57.106 55.556 0.00 0.00 0.00 2.90
4321 5291 1.188219 GCAGAGGATCCTATCGGCCA 61.188 60.000 16.16 0.00 33.66 5.36
4329 5299 1.743321 GCGCTACTGCAGAGGATCCT 61.743 60.000 23.35 16.13 39.64 3.24
4331 5301 1.439228 TGCGCTACTGCAGAGGATC 59.561 57.895 23.35 6.90 40.62 3.36
4332 5302 3.621225 TGCGCTACTGCAGAGGAT 58.379 55.556 23.35 0.00 40.62 3.24
4338 5308 1.003959 TTCATGGTGCGCTACTGCA 60.004 52.632 9.73 0.33 43.95 4.41
4340 5310 2.293677 TACTTCATGGTGCGCTACTG 57.706 50.000 9.73 0.90 0.00 2.74
4341 5311 3.637229 ACTATACTTCATGGTGCGCTACT 59.363 43.478 9.73 0.00 0.00 2.57
4342 5312 3.978687 ACTATACTTCATGGTGCGCTAC 58.021 45.455 9.73 5.08 0.00 3.58
4343 5313 3.634910 TGACTATACTTCATGGTGCGCTA 59.365 43.478 9.73 0.00 0.00 4.26
4344 5314 2.430694 TGACTATACTTCATGGTGCGCT 59.569 45.455 9.73 0.00 0.00 5.92
4345 5315 2.540101 GTGACTATACTTCATGGTGCGC 59.460 50.000 0.00 0.00 0.00 6.09
4346 5316 3.798878 CAGTGACTATACTTCATGGTGCG 59.201 47.826 0.00 0.00 0.00 5.34
4347 5317 4.759782 ACAGTGACTATACTTCATGGTGC 58.240 43.478 0.00 0.00 0.00 5.01
4348 5318 5.965922 TGACAGTGACTATACTTCATGGTG 58.034 41.667 0.00 0.00 0.00 4.17
4349 5319 6.155221 ACATGACAGTGACTATACTTCATGGT 59.845 38.462 21.10 12.30 42.48 3.55
4350 5320 6.478016 CACATGACAGTGACTATACTTCATGG 59.522 42.308 21.10 13.42 42.48 3.66
4352 5322 6.381133 TCCACATGACAGTGACTATACTTCAT 59.619 38.462 0.00 0.00 42.05 2.57
4353 5323 5.714806 TCCACATGACAGTGACTATACTTCA 59.285 40.000 0.00 0.00 42.05 3.02
4355 5325 5.105310 GGTCCACATGACAGTGACTATACTT 60.105 44.000 0.00 0.00 46.38 2.24
4356 5326 4.402793 GGTCCACATGACAGTGACTATACT 59.597 45.833 0.00 0.00 46.38 2.12
4357 5327 4.441634 GGGTCCACATGACAGTGACTATAC 60.442 50.000 0.00 0.00 46.38 1.47
4358 5328 3.704566 GGGTCCACATGACAGTGACTATA 59.295 47.826 0.00 0.00 46.38 1.31
4359 5329 2.501723 GGGTCCACATGACAGTGACTAT 59.498 50.000 0.00 0.00 46.38 2.12
4360 5330 1.899814 GGGTCCACATGACAGTGACTA 59.100 52.381 0.00 0.00 46.38 2.59
4363 5333 1.671166 CGGGTCCACATGACAGTGA 59.329 57.895 0.00 0.00 46.38 3.41
4365 5335 2.592993 CCCGGGTCCACATGACAGT 61.593 63.158 14.18 0.00 46.38 3.55
4366 5336 2.268920 CCCGGGTCCACATGACAG 59.731 66.667 14.18 0.00 46.38 3.51
4367 5337 4.028490 GCCCGGGTCCACATGACA 62.028 66.667 24.63 0.00 46.38 3.58
4376 5346 4.796495 GACATGTGGGCCCGGGTC 62.796 72.222 24.63 22.35 0.00 4.46
4378 5348 4.127744 ATGACATGTGGGCCCGGG 62.128 66.667 19.09 19.09 0.00 5.73
4379 5349 2.516930 GATGACATGTGGGCCCGG 60.517 66.667 19.37 9.27 0.00 5.73
4380 5350 2.516930 GGATGACATGTGGGCCCG 60.517 66.667 19.37 4.81 0.00 6.13
4381 5351 2.516930 CGGATGACATGTGGGCCC 60.517 66.667 17.59 17.59 0.00 5.80
4382 5352 3.211963 GCGGATGACATGTGGGCC 61.212 66.667 1.15 0.00 0.00 5.80
4383 5353 2.438254 TGCGGATGACATGTGGGC 60.438 61.111 1.15 0.00 0.00 5.36
4384 5354 0.177836 TAGTGCGGATGACATGTGGG 59.822 55.000 1.15 0.00 0.00 4.61
4385 5355 1.290203 GTAGTGCGGATGACATGTGG 58.710 55.000 1.15 0.00 0.00 4.17
4386 5356 2.008752 TGTAGTGCGGATGACATGTG 57.991 50.000 1.15 0.00 0.00 3.21
4387 5357 2.289382 TGTTGTAGTGCGGATGACATGT 60.289 45.455 0.00 0.00 0.00 3.21
4388 5358 2.345876 TGTTGTAGTGCGGATGACATG 58.654 47.619 0.00 0.00 0.00 3.21
4389 5359 2.760634 TGTTGTAGTGCGGATGACAT 57.239 45.000 0.00 0.00 0.00 3.06
4390 5360 2.028567 TGATGTTGTAGTGCGGATGACA 60.029 45.455 0.00 0.00 0.00 3.58
4391 5361 2.616960 TGATGTTGTAGTGCGGATGAC 58.383 47.619 0.00 0.00 0.00 3.06
4392 5362 3.541996 ATGATGTTGTAGTGCGGATGA 57.458 42.857 0.00 0.00 0.00 2.92
4393 5363 4.620982 TCTATGATGTTGTAGTGCGGATG 58.379 43.478 0.00 0.00 0.00 3.51
4394 5364 4.342378 ACTCTATGATGTTGTAGTGCGGAT 59.658 41.667 0.00 0.00 0.00 4.18
4395 5365 3.699538 ACTCTATGATGTTGTAGTGCGGA 59.300 43.478 0.00 0.00 0.00 5.54
4396 5366 4.046938 ACTCTATGATGTTGTAGTGCGG 57.953 45.455 0.00 0.00 0.00 5.69
4397 5367 5.683302 CAGTACTCTATGATGTTGTAGTGCG 59.317 44.000 0.00 0.00 30.96 5.34
4398 5368 5.460419 GCAGTACTCTATGATGTTGTAGTGC 59.540 44.000 13.13 13.13 46.24 4.40
4399 5369 6.564328 TGCAGTACTCTATGATGTTGTAGTG 58.436 40.000 0.00 0.00 37.51 2.74
4400 5370 6.603599 TCTGCAGTACTCTATGATGTTGTAGT 59.396 38.462 14.67 0.00 0.00 2.73
4401 5371 7.032377 TCTGCAGTACTCTATGATGTTGTAG 57.968 40.000 14.67 0.00 0.00 2.74
4402 5372 6.039829 CCTCTGCAGTACTCTATGATGTTGTA 59.960 42.308 14.67 0.00 0.00 2.41
4403 5373 5.163468 CCTCTGCAGTACTCTATGATGTTGT 60.163 44.000 14.67 0.00 0.00 3.32
4404 5374 5.068329 TCCTCTGCAGTACTCTATGATGTTG 59.932 44.000 14.67 0.00 0.00 3.33
4405 5375 5.204292 TCCTCTGCAGTACTCTATGATGTT 58.796 41.667 14.67 0.00 0.00 2.71
4406 5376 4.797743 TCCTCTGCAGTACTCTATGATGT 58.202 43.478 14.67 0.00 0.00 3.06
4407 5377 5.711506 AGATCCTCTGCAGTACTCTATGATG 59.288 44.000 14.67 0.00 0.00 3.07
4408 5378 5.891198 AGATCCTCTGCAGTACTCTATGAT 58.109 41.667 14.67 0.96 0.00 2.45
4409 5379 5.163152 TGAGATCCTCTGCAGTACTCTATGA 60.163 44.000 14.67 0.00 0.00 2.15
4410 5380 5.069318 TGAGATCCTCTGCAGTACTCTATG 58.931 45.833 14.67 0.00 0.00 2.23
4411 5381 5.317600 TGAGATCCTCTGCAGTACTCTAT 57.682 43.478 14.67 0.23 0.00 1.98
4412 5382 4.779993 TGAGATCCTCTGCAGTACTCTA 57.220 45.455 14.67 0.00 0.00 2.43
4413 5383 3.660970 TGAGATCCTCTGCAGTACTCT 57.339 47.619 14.67 11.50 0.00 3.24
4414 5384 3.181480 GGTTGAGATCCTCTGCAGTACTC 60.181 52.174 14.67 15.15 0.00 2.59
4415 5385 2.763448 GGTTGAGATCCTCTGCAGTACT 59.237 50.000 14.67 7.05 0.00 2.73
4416 5386 2.497675 TGGTTGAGATCCTCTGCAGTAC 59.502 50.000 14.67 2.25 0.00 2.73
4417 5387 2.497675 GTGGTTGAGATCCTCTGCAGTA 59.502 50.000 14.67 0.81 0.00 2.74
4418 5388 1.277557 GTGGTTGAGATCCTCTGCAGT 59.722 52.381 14.67 0.00 0.00 4.40
4419 5389 1.738365 CGTGGTTGAGATCCTCTGCAG 60.738 57.143 7.63 7.63 0.00 4.41
4420 5390 0.247460 CGTGGTTGAGATCCTCTGCA 59.753 55.000 0.00 0.00 0.00 4.41
4421 5391 0.247736 ACGTGGTTGAGATCCTCTGC 59.752 55.000 0.00 0.00 0.00 4.26
4422 5392 2.751166 AACGTGGTTGAGATCCTCTG 57.249 50.000 0.00 0.00 0.00 3.35
4423 5393 2.352814 CGAAACGTGGTTGAGATCCTCT 60.353 50.000 0.00 0.00 0.00 3.69
4424 5394 1.993370 CGAAACGTGGTTGAGATCCTC 59.007 52.381 0.00 0.00 0.00 3.71
4425 5395 1.939838 GCGAAACGTGGTTGAGATCCT 60.940 52.381 0.00 0.00 0.00 3.24
4426 5396 0.442699 GCGAAACGTGGTTGAGATCC 59.557 55.000 0.00 0.00 0.00 3.36
4427 5397 0.442699 GGCGAAACGTGGTTGAGATC 59.557 55.000 0.00 0.00 0.00 2.75
4428 5398 1.289109 CGGCGAAACGTGGTTGAGAT 61.289 55.000 0.00 0.00 0.00 2.75
4429 5399 1.952133 CGGCGAAACGTGGTTGAGA 60.952 57.895 0.00 0.00 0.00 3.27
4430 5400 2.549282 CGGCGAAACGTGGTTGAG 59.451 61.111 0.00 0.00 0.00 3.02
4431 5401 2.968156 CCGGCGAAACGTGGTTGA 60.968 61.111 9.30 0.00 0.00 3.18
4432 5402 4.020378 CCCGGCGAAACGTGGTTG 62.020 66.667 9.30 0.00 0.00 3.77
4436 5406 3.719144 GAACCCCGGCGAAACGTG 61.719 66.667 9.30 0.00 0.00 4.49
4437 5407 3.540367 ATGAACCCCGGCGAAACGT 62.540 57.895 9.30 0.00 0.00 3.99
4460 5430 1.668294 ACTGGTCTCCTTCAGTGCG 59.332 57.895 0.00 0.00 42.00 5.34
4463 5433 0.683973 CAGCACTGGTCTCCTTCAGT 59.316 55.000 0.00 0.00 44.12 3.41
4464 5434 0.036577 CCAGCACTGGTCTCCTTCAG 60.037 60.000 8.61 0.00 45.53 3.02
4465 5435 2.061220 CCAGCACTGGTCTCCTTCA 58.939 57.895 8.61 0.00 45.53 3.02
4518 5513 1.002274 ATGAGAGGGGAGGAAGCGT 59.998 57.895 0.00 0.00 0.00 5.07
4520 5515 0.399806 AGGATGAGAGGGGAGGAAGC 60.400 60.000 0.00 0.00 0.00 3.86
4522 5517 2.112691 GGATAGGATGAGAGGGGAGGAA 59.887 54.545 0.00 0.00 0.00 3.36
4553 5548 1.447140 CGATCTTGCGAACCGGGAA 60.447 57.895 6.32 0.00 0.00 3.97
4576 5571 9.343539 ACATTTATATAGAGAAAGAAAGGGCAC 57.656 33.333 0.00 0.00 0.00 5.01
4608 5603 3.814283 TGGCCAAAAATTTGATGCAAGAC 59.186 39.130 0.61 0.00 40.55 3.01
4619 5614 4.654389 TCAATGGGAATGGCCAAAAATT 57.346 36.364 10.96 0.00 38.95 1.82
4621 5616 3.749226 GTTCAATGGGAATGGCCAAAAA 58.251 40.909 10.96 0.00 37.93 1.94
4626 5621 1.141665 GCGTTCAATGGGAATGGCC 59.858 57.895 0.00 0.00 41.84 5.36
4627 5622 4.812814 GCGTTCAATGGGAATGGC 57.187 55.556 0.00 0.00 41.84 4.40
4629 5624 0.173255 GTGGGCGTTCAATGGGAATG 59.827 55.000 0.00 0.00 43.94 2.67
4636 5632 3.181501 CGTGAAATATGTGGGCGTTCAAT 60.182 43.478 0.00 0.00 30.49 2.57
4651 5647 9.191995 GGAAATTTATCTGTTTTCACGTGAAAT 57.808 29.630 36.57 25.89 42.83 2.17
4653 5649 7.708051 TGGAAATTTATCTGTTTTCACGTGAA 58.292 30.769 26.53 26.53 32.30 3.18
4657 5653 9.840427 AAGTATGGAAATTTATCTGTTTTCACG 57.160 29.630 0.00 0.00 32.30 4.35


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.