Multiple sequence alignment - TraesCS5B01G330700

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G330700 chr5B 100.000 4733 0 0 1 4733 515183036 515187768 0.000000e+00 8741.0
1 TraesCS5B01G330700 chr5B 76.248 741 148 21 2789 3506 6918980 6918245 7.480000e-98 368.0
2 TraesCS5B01G330700 chr5B 96.875 32 1 0 540 571 504061657 504061688 2.000000e-03 54.7
3 TraesCS5B01G330700 chr5A 91.000 4011 250 66 570 4483 540051460 540055456 0.000000e+00 5304.0
4 TraesCS5B01G330700 chr5A 77.273 396 27 22 17 384 540050877 540051237 1.750000e-39 174.0
5 TraesCS5B01G330700 chr5D 93.003 3230 160 24 871 4062 425838745 425841946 0.000000e+00 4652.0
6 TraesCS5B01G330700 chr5D 81.598 1402 211 24 965 2346 104257658 104256284 0.000000e+00 1116.0
7 TraesCS5B01G330700 chr5D 77.189 868 96 49 1 817 425837902 425838718 3.410000e-111 412.0
8 TraesCS5B01G330700 chr3A 86.850 1384 153 11 976 2346 44639408 44640775 0.000000e+00 1520.0
9 TraesCS5B01G330700 chr3A 87.008 1347 141 18 1009 2342 44709776 44711101 0.000000e+00 1487.0
10 TraesCS5B01G330700 chr3A 81.481 891 151 11 2624 3504 186041144 186040258 0.000000e+00 719.0
11 TraesCS5B01G330700 chr3B 86.705 1384 155 11 976 2346 54794206 54795573 0.000000e+00 1509.0
12 TraesCS5B01G330700 chr3B 85.770 1286 161 10 1011 2288 54784766 54786037 0.000000e+00 1341.0
13 TraesCS5B01G330700 chr3B 81.236 890 155 10 2624 3504 236496455 236495569 0.000000e+00 708.0
14 TraesCS5B01G330700 chr3B 97.059 34 0 1 871 904 54784585 54784617 6.620000e-04 56.5
15 TraesCS5B01G330700 chr3B 97.059 34 0 1 871 904 54794070 54794102 6.620000e-04 56.5
16 TraesCS5B01G330700 chr3B 96.875 32 1 0 540 571 45146319 45146350 2.000000e-03 54.7
17 TraesCS5B01G330700 chr3D 85.290 1346 171 14 1010 2346 32278841 32280168 0.000000e+00 1363.0
18 TraesCS5B01G330700 chr3D 86.006 1272 153 11 1081 2335 32299601 32300864 0.000000e+00 1339.0
19 TraesCS5B01G330700 chr3D 81.124 890 156 9 2624 3504 159786791 159785905 0.000000e+00 702.0
20 TraesCS5B01G330700 chr4D 83.784 814 125 6 2696 3504 630189 631000 0.000000e+00 765.0
21 TraesCS5B01G330700 chr4B 83.744 812 123 8 2699 3504 1244531 1243723 0.000000e+00 760.0
22 TraesCS5B01G330700 chr4B 82.609 299 40 11 2771 3063 638987629 638987921 2.190000e-63 254.0
23 TraesCS5B01G330700 chr4A 83.456 816 127 6 2696 3504 900719 901533 0.000000e+00 752.0
24 TraesCS5B01G330700 chr4A 78.077 780 149 19 2740 3505 709977859 709977088 1.540000e-129 473.0
25 TraesCS5B01G330700 chr7D 78.718 780 144 19 2740 3505 25523007 25522236 7.070000e-138 501.0
26 TraesCS5B01G330700 chr1D 75.534 1030 235 15 2696 3715 316858364 316859386 1.530000e-134 490.0
27 TraesCS5B01G330700 chr7A 78.205 780 148 19 2740 3505 26449304 26448533 3.310000e-131 479.0
28 TraesCS5B01G330700 chr1B 74.662 1034 234 24 2696 3715 429003821 429004840 2.620000e-117 433.0
29 TraesCS5B01G330700 chrUn 82.456 171 23 1 4563 4733 2182142 2181979 4.940000e-30 143.0
30 TraesCS5B01G330700 chr1A 82.456 171 23 1 4563 4733 587769492 587769655 4.940000e-30 143.0
31 TraesCS5B01G330700 chr1A 100.000 27 0 0 4707 4733 587739882 587739908 3.100000e-02 51.0
32 TraesCS5B01G330700 chr7B 96.875 32 1 0 540 571 577361477 577361508 2.000000e-03 54.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G330700 chr5B 515183036 515187768 4732 False 8741.00 8741 100.0000 1 4733 1 chr5B.!!$F2 4732
1 TraesCS5B01G330700 chr5B 6918245 6918980 735 True 368.00 368 76.2480 2789 3506 1 chr5B.!!$R1 717
2 TraesCS5B01G330700 chr5A 540050877 540055456 4579 False 2739.00 5304 84.1365 17 4483 2 chr5A.!!$F1 4466
3 TraesCS5B01G330700 chr5D 425837902 425841946 4044 False 2532.00 4652 85.0960 1 4062 2 chr5D.!!$F1 4061
4 TraesCS5B01G330700 chr5D 104256284 104257658 1374 True 1116.00 1116 81.5980 965 2346 1 chr5D.!!$R1 1381
5 TraesCS5B01G330700 chr3A 44639408 44640775 1367 False 1520.00 1520 86.8500 976 2346 1 chr3A.!!$F1 1370
6 TraesCS5B01G330700 chr3A 44709776 44711101 1325 False 1487.00 1487 87.0080 1009 2342 1 chr3A.!!$F2 1333
7 TraesCS5B01G330700 chr3A 186040258 186041144 886 True 719.00 719 81.4810 2624 3504 1 chr3A.!!$R1 880
8 TraesCS5B01G330700 chr3B 54794070 54795573 1503 False 782.75 1509 91.8820 871 2346 2 chr3B.!!$F3 1475
9 TraesCS5B01G330700 chr3B 236495569 236496455 886 True 708.00 708 81.2360 2624 3504 1 chr3B.!!$R1 880
10 TraesCS5B01G330700 chr3B 54784585 54786037 1452 False 698.75 1341 91.4145 871 2288 2 chr3B.!!$F2 1417
11 TraesCS5B01G330700 chr3D 32278841 32280168 1327 False 1363.00 1363 85.2900 1010 2346 1 chr3D.!!$F1 1336
12 TraesCS5B01G330700 chr3D 32299601 32300864 1263 False 1339.00 1339 86.0060 1081 2335 1 chr3D.!!$F2 1254
13 TraesCS5B01G330700 chr3D 159785905 159786791 886 True 702.00 702 81.1240 2624 3504 1 chr3D.!!$R1 880
14 TraesCS5B01G330700 chr4D 630189 631000 811 False 765.00 765 83.7840 2696 3504 1 chr4D.!!$F1 808
15 TraesCS5B01G330700 chr4B 1243723 1244531 808 True 760.00 760 83.7440 2699 3504 1 chr4B.!!$R1 805
16 TraesCS5B01G330700 chr4A 900719 901533 814 False 752.00 752 83.4560 2696 3504 1 chr4A.!!$F1 808
17 TraesCS5B01G330700 chr4A 709977088 709977859 771 True 473.00 473 78.0770 2740 3505 1 chr4A.!!$R1 765
18 TraesCS5B01G330700 chr7D 25522236 25523007 771 True 501.00 501 78.7180 2740 3505 1 chr7D.!!$R1 765
19 TraesCS5B01G330700 chr1D 316858364 316859386 1022 False 490.00 490 75.5340 2696 3715 1 chr1D.!!$F1 1019
20 TraesCS5B01G330700 chr7A 26448533 26449304 771 True 479.00 479 78.2050 2740 3505 1 chr7A.!!$R1 765
21 TraesCS5B01G330700 chr1B 429003821 429004840 1019 False 433.00 433 74.6620 2696 3715 1 chr1B.!!$F1 1019

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
116 131 0.107017 CCTGCTCAGGTAACCCCATG 60.107 60.000 7.75 0.0 43.61 3.66 F
299 338 0.107654 GATTTAGTCTGGCTGGCGGT 60.108 55.000 10.06 0.0 0.00 5.68 F
1211 1437 1.092345 GGAGCATCGACCCAAGAAGC 61.092 60.000 0.00 0.0 34.37 3.86 F
2426 2667 1.282875 GAGCTGTTGGTGGTTTCGC 59.717 57.895 0.00 0.0 0.00 4.70 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1282 1508 0.550914 TCTTGGTTTGGAGCAGTGGT 59.449 50.0 0.00 0.0 34.28 4.16 R
2097 2338 2.381838 TTTGCTCCTGCGCTGTCTGA 62.382 55.0 9.73 0.0 43.34 3.27 R
2556 2800 0.464916 TAGCTGACCGTGATCCGCTA 60.465 55.0 0.00 0.0 39.54 4.26 R
4358 4688 0.099436 GCAAATGTGATCACGAGGCC 59.901 55.0 20.54 0.0 0.00 5.19 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
114 129 3.820425 CCTGCTCAGGTAACCCCA 58.180 61.111 7.75 0.00 43.61 4.96
115 130 2.311287 CCTGCTCAGGTAACCCCAT 58.689 57.895 7.75 0.00 43.61 4.00
116 131 0.107017 CCTGCTCAGGTAACCCCATG 60.107 60.000 7.75 0.00 43.61 3.66
131 150 1.383664 CATGCCTCCTCCTCCTCCA 60.384 63.158 0.00 0.00 0.00 3.86
146 165 1.935327 CTCCACCTCCTCGTTCGTCC 61.935 65.000 0.00 0.00 0.00 4.79
152 171 1.337821 CTCCTCGTTCGTCCTTTTCG 58.662 55.000 0.00 0.00 0.00 3.46
153 172 0.953727 TCCTCGTTCGTCCTTTTCGA 59.046 50.000 0.00 0.00 35.50 3.71
154 173 1.068748 TCCTCGTTCGTCCTTTTCGAG 60.069 52.381 0.00 0.00 44.67 4.04
156 175 0.313043 TCGTTCGTCCTTTTCGAGCT 59.687 50.000 0.00 0.00 38.52 4.09
157 176 0.708918 CGTTCGTCCTTTTCGAGCTC 59.291 55.000 2.73 2.73 38.52 4.09
158 177 1.069255 GTTCGTCCTTTTCGAGCTCC 58.931 55.000 8.47 0.00 38.52 4.70
160 179 0.966920 TCGTCCTTTTCGAGCTCCTT 59.033 50.000 8.47 0.00 33.38 3.36
161 180 1.343465 TCGTCCTTTTCGAGCTCCTTT 59.657 47.619 8.47 0.00 33.38 3.11
162 181 1.461127 CGTCCTTTTCGAGCTCCTTTG 59.539 52.381 8.47 0.00 0.00 2.77
163 182 2.767505 GTCCTTTTCGAGCTCCTTTGA 58.232 47.619 8.47 0.00 0.00 2.69
165 184 3.753797 GTCCTTTTCGAGCTCCTTTGATT 59.246 43.478 8.47 0.00 0.00 2.57
166 185 4.003648 TCCTTTTCGAGCTCCTTTGATTC 58.996 43.478 8.47 0.00 0.00 2.52
167 186 3.181516 CCTTTTCGAGCTCCTTTGATTCG 60.182 47.826 8.47 0.00 0.00 3.34
168 187 2.010145 TTCGAGCTCCTTTGATTCGG 57.990 50.000 8.47 0.00 31.89 4.30
169 188 1.182667 TCGAGCTCCTTTGATTCGGA 58.817 50.000 8.47 0.00 31.89 4.55
170 189 1.135083 TCGAGCTCCTTTGATTCGGAC 60.135 52.381 8.47 0.00 31.89 4.79
171 190 1.404181 CGAGCTCCTTTGATTCGGACA 60.404 52.381 8.47 0.00 0.00 4.02
172 191 2.699954 GAGCTCCTTTGATTCGGACAA 58.300 47.619 0.87 0.00 0.00 3.18
173 192 3.074412 GAGCTCCTTTGATTCGGACAAA 58.926 45.455 0.87 0.00 36.15 2.83
183 207 3.938963 TGATTCGGACAAAGCTCCATTAC 59.061 43.478 0.00 0.00 0.00 1.89
206 230 0.606604 GCTTGACGGGTTCCAGTAGA 59.393 55.000 0.00 0.00 0.00 2.59
207 231 1.672145 GCTTGACGGGTTCCAGTAGAC 60.672 57.143 0.00 0.00 0.00 2.59
251 289 4.513692 GGCAAATCAAAGGGTTTGTTTACC 59.486 41.667 2.79 0.00 41.36 2.85
258 296 6.192044 TCAAAGGGTTTGTTTACCTCTTTCT 58.808 36.000 0.00 0.00 41.36 2.52
287 325 2.587889 CCGGCCGGGTGATTTAGT 59.412 61.111 37.42 0.00 0.00 2.24
288 326 1.523032 CCGGCCGGGTGATTTAGTC 60.523 63.158 37.42 0.00 0.00 2.59
290 328 0.810031 CGGCCGGGTGATTTAGTCTG 60.810 60.000 20.10 0.00 0.00 3.51
297 336 1.009829 GTGATTTAGTCTGGCTGGCG 58.990 55.000 0.00 0.00 0.00 5.69
299 338 0.107654 GATTTAGTCTGGCTGGCGGT 60.108 55.000 10.06 0.00 0.00 5.68
317 356 3.868754 GCGGTCATTTGGGTACTCTTTCT 60.869 47.826 0.00 0.00 0.00 2.52
330 369 4.983671 ACTCTTTCTTGTTTTGGTGGTC 57.016 40.909 0.00 0.00 0.00 4.02
334 373 2.818751 TCTTGTTTTGGTGGTCTGGT 57.181 45.000 0.00 0.00 0.00 4.00
337 376 3.445805 TCTTGTTTTGGTGGTCTGGTTTC 59.554 43.478 0.00 0.00 0.00 2.78
341 380 4.040461 TGTTTTGGTGGTCTGGTTTCAAAA 59.960 37.500 0.00 0.00 33.51 2.44
342 381 4.464069 TTTGGTGGTCTGGTTTCAAAAG 57.536 40.909 0.00 0.00 0.00 2.27
369 411 5.144100 AGAGTATATGTGAGCTACAGCCTT 58.856 41.667 0.00 0.00 43.80 4.35
417 460 8.728596 TTTTTAGGGGAAATACCATTTCAGAA 57.271 30.769 12.34 0.00 41.20 3.02
469 512 9.838339 TTTCTTTTCTAGATGTAGAATCATCCC 57.162 33.333 12.69 0.00 43.43 3.85
496 546 4.973168 TCAGGACTGTTGCTCTATGTTTT 58.027 39.130 0.00 0.00 0.00 2.43
497 547 6.109156 TCAGGACTGTTGCTCTATGTTTTA 57.891 37.500 0.00 0.00 0.00 1.52
498 548 6.711277 TCAGGACTGTTGCTCTATGTTTTAT 58.289 36.000 0.00 0.00 0.00 1.40
501 551 8.299570 CAGGACTGTTGCTCTATGTTTTATTTT 58.700 33.333 0.00 0.00 0.00 1.82
502 552 8.515414 AGGACTGTTGCTCTATGTTTTATTTTC 58.485 33.333 0.00 0.00 0.00 2.29
503 553 8.515414 GGACTGTTGCTCTATGTTTTATTTTCT 58.485 33.333 0.00 0.00 0.00 2.52
504 554 9.548208 GACTGTTGCTCTATGTTTTATTTTCTC 57.452 33.333 0.00 0.00 0.00 2.87
518 568 9.399403 GTTTTATTTTCTCTTCTTGGTGTGATC 57.601 33.333 0.00 0.00 0.00 2.92
520 570 6.814506 ATTTTCTCTTCTTGGTGTGATCTG 57.185 37.500 0.00 0.00 0.00 2.90
522 572 4.963318 TCTCTTCTTGGTGTGATCTGTT 57.037 40.909 0.00 0.00 0.00 3.16
525 575 5.034852 TCTTCTTGGTGTGATCTGTTCAA 57.965 39.130 0.00 0.00 35.70 2.69
526 576 5.059161 TCTTCTTGGTGTGATCTGTTCAAG 58.941 41.667 10.82 10.82 35.70 3.02
527 577 4.422073 TCTTGGTGTGATCTGTTCAAGT 57.578 40.909 14.30 0.00 35.70 3.16
528 578 4.780815 TCTTGGTGTGATCTGTTCAAGTT 58.219 39.130 14.30 0.00 35.70 2.66
529 579 5.192927 TCTTGGTGTGATCTGTTCAAGTTT 58.807 37.500 14.30 0.00 35.70 2.66
530 580 5.652014 TCTTGGTGTGATCTGTTCAAGTTTT 59.348 36.000 14.30 0.00 35.70 2.43
531 581 5.499139 TGGTGTGATCTGTTCAAGTTTTC 57.501 39.130 0.00 0.00 35.70 2.29
544 594 6.036953 TGTTCAAGTTTTCATTCACAAATGCC 59.963 34.615 0.00 0.00 41.76 4.40
545 595 5.668471 TCAAGTTTTCATTCACAAATGCCA 58.332 33.333 0.00 0.00 41.76 4.92
546 596 6.289834 TCAAGTTTTCATTCACAAATGCCAT 58.710 32.000 0.00 0.00 41.76 4.40
547 597 6.203145 TCAAGTTTTCATTCACAAATGCCATG 59.797 34.615 0.00 0.00 41.76 3.66
549 599 6.757237 AGTTTTCATTCACAAATGCCATGTA 58.243 32.000 0.00 0.00 41.76 2.29
551 601 5.981088 TTCATTCACAAATGCCATGTACT 57.019 34.783 0.00 0.00 41.76 2.73
552 602 5.565592 TCATTCACAAATGCCATGTACTC 57.434 39.130 0.00 0.00 41.76 2.59
553 603 4.398988 TCATTCACAAATGCCATGTACTCC 59.601 41.667 0.00 0.00 41.76 3.85
554 604 2.722094 TCACAAATGCCATGTACTCCC 58.278 47.619 0.00 0.00 0.00 4.30
555 605 2.308570 TCACAAATGCCATGTACTCCCT 59.691 45.455 0.00 0.00 0.00 4.20
556 606 2.684881 CACAAATGCCATGTACTCCCTC 59.315 50.000 0.00 0.00 0.00 4.30
557 607 2.578021 ACAAATGCCATGTACTCCCTCT 59.422 45.455 0.00 0.00 0.00 3.69
559 609 4.413520 ACAAATGCCATGTACTCCCTCTAT 59.586 41.667 0.00 0.00 0.00 1.98
560 610 5.606749 ACAAATGCCATGTACTCCCTCTATA 59.393 40.000 0.00 0.00 0.00 1.31
562 612 6.763715 AATGCCATGTACTCCCTCTATAAA 57.236 37.500 0.00 0.00 0.00 1.40
563 613 5.808366 TGCCATGTACTCCCTCTATAAAG 57.192 43.478 0.00 0.00 0.00 1.85
564 614 5.464069 TGCCATGTACTCCCTCTATAAAGA 58.536 41.667 0.00 0.00 0.00 2.52
565 615 5.903010 TGCCATGTACTCCCTCTATAAAGAA 59.097 40.000 0.00 0.00 0.00 2.52
567 617 7.072454 TGCCATGTACTCCCTCTATAAAGAAAT 59.928 37.037 0.00 0.00 0.00 2.17
568 618 8.594550 GCCATGTACTCCCTCTATAAAGAAATA 58.405 37.037 0.00 0.00 0.00 1.40
590 718 3.356529 AGCTACCTTTTCCCTGATGTG 57.643 47.619 0.00 0.00 0.00 3.21
593 721 3.191371 GCTACCTTTTCCCTGATGTGTTG 59.809 47.826 0.00 0.00 0.00 3.33
604 732 6.801575 TCCCTGATGTGTTGTTTTCTTAAAC 58.198 36.000 0.00 0.00 43.17 2.01
607 735 7.222611 CCCTGATGTGTTGTTTTCTTAAACTTG 59.777 37.037 0.00 0.00 43.25 3.16
613 741 5.804979 TGTTGTTTTCTTAAACTTGCTCTGC 59.195 36.000 0.00 0.00 43.25 4.26
614 742 4.597079 TGTTTTCTTAAACTTGCTCTGCG 58.403 39.130 0.00 0.00 43.25 5.18
616 744 4.893424 TTTCTTAAACTTGCTCTGCGTT 57.107 36.364 0.00 0.00 0.00 4.84
658 786 3.210528 GCTGCTGCATCTGCCCTC 61.211 66.667 11.11 0.00 41.18 4.30
676 805 6.647229 TGCCCTCATGATAGCTAAATATCTG 58.353 40.000 15.72 0.00 33.98 2.90
743 876 5.277490 GCTGAATTATTGAGCAGCGTATTCA 60.277 40.000 11.31 0.00 43.43 2.57
756 889 8.472683 AGCAGCGTATTCATATTAATCTCTTC 57.527 34.615 0.00 0.00 0.00 2.87
760 893 8.807118 AGCGTATTCATATTAATCTCTTCTCCA 58.193 33.333 0.00 0.00 0.00 3.86
808 945 3.868835 GCAACTTCAATTTGCTTGCAAG 58.131 40.909 22.44 22.44 44.96 4.01
810 947 4.201841 GCAACTTCAATTTGCTTGCAAGTT 60.202 37.500 26.55 11.01 44.96 2.66
819 956 5.673337 TTTGCTTGCAAGTTCTACTAGTG 57.327 39.130 26.55 0.00 0.00 2.74
824 961 5.467063 GCTTGCAAGTTCTACTAGTGTTCTT 59.533 40.000 26.55 2.47 0.00 2.52
831 968 9.745880 CAAGTTCTACTAGTGTTCTTTTACTCA 57.254 33.333 5.39 0.00 0.00 3.41
839 976 8.139989 ACTAGTGTTCTTTTACTCATACACGTT 58.860 33.333 0.00 0.00 40.44 3.99
848 985 7.576750 TTTACTCATACACGTTGATGTTCTC 57.423 36.000 6.38 0.00 33.85 2.87
852 989 2.457366 ACACGTTGATGTTCTCCCTC 57.543 50.000 0.00 0.00 0.00 4.30
853 990 1.691976 ACACGTTGATGTTCTCCCTCA 59.308 47.619 0.00 0.00 0.00 3.86
862 999 5.201713 GATGTTCTCCCTCACATCGATTA 57.798 43.478 0.00 0.00 39.88 1.75
863 1000 5.788450 GATGTTCTCCCTCACATCGATTAT 58.212 41.667 0.00 0.00 39.88 1.28
943 1116 2.682856 TGTGCCTTCTTCACTGAACAAC 59.317 45.455 0.00 0.00 35.58 3.32
1137 1357 3.193691 GCCTCACACTGTTAGCTCTCTTA 59.806 47.826 0.00 0.00 0.00 2.10
1143 1363 6.033341 CACACTGTTAGCTCTCTTATCACTC 58.967 44.000 0.00 0.00 0.00 3.51
1211 1437 1.092345 GGAGCATCGACCCAAGAAGC 61.092 60.000 0.00 0.00 34.37 3.86
1235 1461 2.811410 TGATAGTGGTCGTACTTGGGT 58.189 47.619 0.00 0.00 32.19 4.51
1282 1508 4.617995 CGCCATTATTGAAAGGAGTTGCAA 60.618 41.667 0.00 0.00 0.00 4.08
1893 2134 5.290493 TGACCATCACCTATACATCCAAC 57.710 43.478 0.00 0.00 0.00 3.77
2071 2312 6.874288 ATCCTATTACAAAGCAGAATCAGC 57.126 37.500 0.00 0.00 0.00 4.26
2097 2338 6.825721 GGTCCTTCTTCATCTACATCAACAAT 59.174 38.462 0.00 0.00 0.00 2.71
2347 2588 2.031120 CTCCACTTCCACAAAAGCCAA 58.969 47.619 0.00 0.00 0.00 4.52
2426 2667 1.282875 GAGCTGTTGGTGGTTTCGC 59.717 57.895 0.00 0.00 0.00 4.70
2487 2731 5.092781 TGCAAACGAAAGAACAAGAAGAAC 58.907 37.500 0.00 0.00 0.00 3.01
2556 2800 1.564818 TGGACTCCTCTCACCGAGTAT 59.435 52.381 0.00 0.00 39.44 2.12
2568 2812 3.677960 CGAGTATAGCGGATCACGG 57.322 57.895 0.00 0.00 44.51 4.94
2595 2839 3.862991 TCGGGAAACACGGCCACA 61.863 61.111 2.24 0.00 0.00 4.17
2667 2911 0.400213 TTCAGACCGCCACCAAGAAT 59.600 50.000 0.00 0.00 0.00 2.40
2733 2977 1.454111 CCTCGGGGAGATCGACAGT 60.454 63.158 0.00 0.00 32.86 3.55
2959 3215 4.717629 CGCCGCTGTCGTGGAAGA 62.718 66.667 0.00 0.00 43.70 2.87
3531 3802 4.008933 GACACCGGCAGCCTCACT 62.009 66.667 10.54 0.00 0.00 3.41
3750 4027 3.181469 GGTGAAGTTGGACTGTGACAGTA 60.181 47.826 19.46 0.33 45.44 2.74
3790 4067 3.253188 ACAACATTCTTGGTCCACATTCG 59.747 43.478 0.00 0.00 0.00 3.34
3889 4169 5.359292 GGTACGGAGTCACTTATTAGGACTT 59.641 44.000 0.00 0.00 43.93 3.01
3890 4170 5.579564 ACGGAGTCACTTATTAGGACTTC 57.420 43.478 0.00 0.00 41.68 3.01
3986 4290 7.485913 CGGTTCTTATCTGAATTTTGTGAATGG 59.514 37.037 0.00 0.00 0.00 3.16
4019 4323 2.411547 CCGCTTTTCATGTCGTTCTGTC 60.412 50.000 0.00 0.00 0.00 3.51
4023 4327 4.766007 CTTTTCATGTCGTTCTGTCTGTG 58.234 43.478 0.00 0.00 0.00 3.66
4062 4366 4.764823 CCTCTCTGTGTTCTGAACTACTCT 59.235 45.833 20.18 0.00 0.00 3.24
4063 4367 5.941058 CCTCTCTGTGTTCTGAACTACTCTA 59.059 44.000 20.18 0.00 0.00 2.43
4071 4375 6.366332 GTGTTCTGAACTACTCTACATTGGTG 59.634 42.308 20.18 0.00 0.00 4.17
4077 4381 0.912486 ACTCTACATTGGTGAGGGCC 59.088 55.000 0.00 0.00 32.58 5.80
4091 4395 3.191371 GTGAGGGCCTGTAACTCAAAATG 59.809 47.826 12.95 0.00 42.30 2.32
4092 4396 3.073798 TGAGGGCCTGTAACTCAAAATGA 59.926 43.478 12.95 0.00 38.22 2.57
4111 4415 9.615295 CAAAATGATTTTGTTGGATTTCATTCC 57.385 29.630 19.63 0.00 43.77 3.01
4114 4418 9.880157 AATGATTTTGTTGGATTTCATTCCTAG 57.120 29.630 0.00 0.00 36.68 3.02
4121 4425 6.318648 TGTTGGATTTCATTCCTAGGATTTCG 59.681 38.462 13.57 1.56 36.68 3.46
4128 4432 5.671493 TCATTCCTAGGATTTCGTCTTTCC 58.329 41.667 13.57 0.00 0.00 3.13
4130 4434 4.737855 TCCTAGGATTTCGTCTTTCCTG 57.262 45.455 7.62 0.00 40.13 3.86
4155 4462 6.927294 AGTATATAGAGCTTGTTTGGTTGC 57.073 37.500 0.00 0.00 0.00 4.17
4182 4489 3.439857 TTCTTTCTTATGGGCAGCTGT 57.560 42.857 16.64 0.00 0.00 4.40
4188 4495 2.138320 CTTATGGGCAGCTGTGTATCG 58.862 52.381 16.64 0.00 0.00 2.92
4189 4496 1.408969 TATGGGCAGCTGTGTATCGA 58.591 50.000 16.64 0.00 0.00 3.59
4190 4497 0.761187 ATGGGCAGCTGTGTATCGAT 59.239 50.000 16.64 2.16 0.00 3.59
4243 4555 1.568504 ATTCCTTGAGGCCGTGAGTA 58.431 50.000 0.00 0.00 34.44 2.59
4245 4557 0.606604 TCCTTGAGGCCGTGAGTAAC 59.393 55.000 0.00 0.00 34.44 2.50
4306 4618 3.409026 CACTTTTACAGTGCCTCCTCT 57.591 47.619 0.00 0.00 46.70 3.69
4307 4619 4.537135 CACTTTTACAGTGCCTCCTCTA 57.463 45.455 0.00 0.00 46.70 2.43
4311 4623 4.939052 TTTACAGTGCCTCCTCTATAGC 57.061 45.455 0.00 0.00 0.00 2.97
4312 4624 2.765689 ACAGTGCCTCCTCTATAGCT 57.234 50.000 0.00 0.00 0.00 3.32
4313 4625 3.039252 ACAGTGCCTCCTCTATAGCTT 57.961 47.619 0.00 0.00 0.00 3.74
4314 4626 4.186077 ACAGTGCCTCCTCTATAGCTTA 57.814 45.455 0.00 0.00 0.00 3.09
4315 4627 3.892588 ACAGTGCCTCCTCTATAGCTTAC 59.107 47.826 0.00 0.00 0.00 2.34
4316 4628 3.257127 CAGTGCCTCCTCTATAGCTTACC 59.743 52.174 0.00 0.00 0.00 2.85
4317 4629 2.229302 GTGCCTCCTCTATAGCTTACCG 59.771 54.545 0.00 0.00 0.00 4.02
4318 4630 2.158505 TGCCTCCTCTATAGCTTACCGT 60.159 50.000 0.00 0.00 0.00 4.83
4319 4631 3.073503 TGCCTCCTCTATAGCTTACCGTA 59.926 47.826 0.00 0.00 0.00 4.02
4320 4632 4.263816 TGCCTCCTCTATAGCTTACCGTAT 60.264 45.833 0.00 0.00 0.00 3.06
4321 4633 4.705991 GCCTCCTCTATAGCTTACCGTATT 59.294 45.833 0.00 0.00 0.00 1.89
4322 4634 5.163632 GCCTCCTCTATAGCTTACCGTATTC 60.164 48.000 0.00 0.00 0.00 1.75
4323 4635 5.944599 CCTCCTCTATAGCTTACCGTATTCA 59.055 44.000 0.00 0.00 0.00 2.57
4324 4636 6.433404 CCTCCTCTATAGCTTACCGTATTCAA 59.567 42.308 0.00 0.00 0.00 2.69
4325 4637 7.122948 CCTCCTCTATAGCTTACCGTATTCAAT 59.877 40.741 0.00 0.00 0.00 2.57
4332 4644 5.855045 AGCTTACCGTATTCAATTAGGGAG 58.145 41.667 0.00 0.00 32.62 4.30
4333 4645 5.365895 AGCTTACCGTATTCAATTAGGGAGT 59.634 40.000 0.00 0.00 32.62 3.85
4336 4648 7.170489 GCTTACCGTATTCAATTAGGGAGTTAC 59.830 40.741 0.00 0.00 32.62 2.50
4358 4688 2.180017 GCTGGCAAAGCGTGGATG 59.820 61.111 0.00 0.00 43.45 3.51
4368 4698 2.501128 CGTGGATGGCCTCGTGAT 59.499 61.111 3.32 0.00 44.01 3.06
4370 4700 1.522092 GTGGATGGCCTCGTGATCA 59.478 57.895 3.32 0.00 34.31 2.92
4381 4711 2.485426 CCTCGTGATCACATTTGCAACT 59.515 45.455 24.93 0.00 0.00 3.16
4383 4713 4.154015 CCTCGTGATCACATTTGCAACTTA 59.846 41.667 24.93 0.00 0.00 2.24
4385 4715 3.840209 CGTGATCACATTTGCAACTTACG 59.160 43.478 24.93 2.55 0.00 3.18
4386 4716 3.603770 GTGATCACATTTGCAACTTACGC 59.396 43.478 21.07 0.00 0.00 4.42
4388 4718 3.266541 TCACATTTGCAACTTACGCTG 57.733 42.857 0.00 0.00 0.00 5.18
4390 4720 1.336440 ACATTTGCAACTTACGCTGCA 59.664 42.857 0.00 0.00 46.50 4.41
4394 4724 0.387112 TGCAACTTACGCTGCAATGC 60.387 50.000 0.00 0.00 45.25 3.56
4411 4741 5.126707 TGCAATGCATGTGGTGTATGATTTA 59.873 36.000 2.72 0.00 33.12 1.40
4413 4743 6.199531 GCAATGCATGTGGTGTATGATTTAAG 59.800 38.462 0.00 0.00 33.12 1.85
4414 4744 5.833406 TGCATGTGGTGTATGATTTAAGG 57.167 39.130 0.00 0.00 0.00 2.69
4415 4745 4.644234 TGCATGTGGTGTATGATTTAAGGG 59.356 41.667 0.00 0.00 0.00 3.95
4419 4749 4.080015 TGTGGTGTATGATTTAAGGGGAGG 60.080 45.833 0.00 0.00 0.00 4.30
4420 4750 3.117663 TGGTGTATGATTTAAGGGGAGGC 60.118 47.826 0.00 0.00 0.00 4.70
4421 4751 3.138468 GGTGTATGATTTAAGGGGAGGCT 59.862 47.826 0.00 0.00 0.00 4.58
4422 4752 4.137543 GTGTATGATTTAAGGGGAGGCTG 58.862 47.826 0.00 0.00 0.00 4.85
4424 4754 3.584733 ATGATTTAAGGGGAGGCTGTC 57.415 47.619 0.00 0.00 0.00 3.51
4430 4774 3.148279 GGGGAGGCTGTCGACGAT 61.148 66.667 11.62 0.00 0.00 3.73
4444 4788 1.857217 CGACGATGATCAGCTTTCAGG 59.143 52.381 9.64 0.00 0.00 3.86
4451 4795 2.237893 TGATCAGCTTTCAGGCTCATCA 59.762 45.455 0.00 0.00 45.02 3.07
4468 4812 8.093307 AGGCTCATCACTACATAACTGATATTG 58.907 37.037 0.00 0.00 0.00 1.90
4469 4813 7.875041 GGCTCATCACTACATAACTGATATTGT 59.125 37.037 0.00 0.00 0.00 2.71
4470 4814 9.265901 GCTCATCACTACATAACTGATATTGTT 57.734 33.333 1.65 1.65 0.00 2.83
4504 4851 5.741388 GACACAGTGTCATGTCTTTCTTT 57.259 39.130 26.12 0.00 46.22 2.52
4505 4852 5.741388 ACACAGTGTCATGTCTTTCTTTC 57.259 39.130 0.00 0.00 0.00 2.62
4506 4853 5.431765 ACACAGTGTCATGTCTTTCTTTCT 58.568 37.500 0.00 0.00 0.00 2.52
4507 4854 5.882557 ACACAGTGTCATGTCTTTCTTTCTT 59.117 36.000 0.00 0.00 0.00 2.52
4508 4855 6.037610 ACACAGTGTCATGTCTTTCTTTCTTC 59.962 38.462 0.00 0.00 0.00 2.87
4509 4856 5.529060 ACAGTGTCATGTCTTTCTTTCTTCC 59.471 40.000 0.00 0.00 0.00 3.46
4510 4857 4.752101 AGTGTCATGTCTTTCTTTCTTCCG 59.248 41.667 0.00 0.00 0.00 4.30
4511 4858 4.750098 GTGTCATGTCTTTCTTTCTTCCGA 59.250 41.667 0.00 0.00 0.00 4.55
4512 4859 5.236478 GTGTCATGTCTTTCTTTCTTCCGAA 59.764 40.000 0.00 0.00 0.00 4.30
4513 4860 5.820423 TGTCATGTCTTTCTTTCTTCCGAAA 59.180 36.000 0.00 0.00 37.55 3.46
4514 4861 6.317642 TGTCATGTCTTTCTTTCTTCCGAAAA 59.682 34.615 0.00 0.00 38.58 2.29
4515 4862 6.853362 GTCATGTCTTTCTTTCTTCCGAAAAG 59.147 38.462 0.00 0.00 38.58 2.27
4516 4863 5.751243 TGTCTTTCTTTCTTCCGAAAAGG 57.249 39.130 0.00 0.00 38.58 3.11
4527 4874 3.334583 TCCGAAAAGGAGAGAATGGTG 57.665 47.619 0.00 0.00 45.98 4.17
4528 4875 2.027192 TCCGAAAAGGAGAGAATGGTGG 60.027 50.000 0.00 0.00 45.98 4.61
4529 4876 2.290323 CCGAAAAGGAGAGAATGGTGGT 60.290 50.000 0.00 0.00 45.00 4.16
4530 4877 2.744202 CGAAAAGGAGAGAATGGTGGTG 59.256 50.000 0.00 0.00 0.00 4.17
4531 4878 2.206576 AAAGGAGAGAATGGTGGTGC 57.793 50.000 0.00 0.00 0.00 5.01
4532 4879 1.366319 AAGGAGAGAATGGTGGTGCT 58.634 50.000 0.00 0.00 0.00 4.40
4533 4880 0.617413 AGGAGAGAATGGTGGTGCTG 59.383 55.000 0.00 0.00 0.00 4.41
4534 4881 1.028868 GGAGAGAATGGTGGTGCTGC 61.029 60.000 0.00 0.00 0.00 5.25
4535 4882 0.035630 GAGAGAATGGTGGTGCTGCT 60.036 55.000 0.00 0.00 0.00 4.24
4536 4883 0.322277 AGAGAATGGTGGTGCTGCTG 60.322 55.000 0.00 0.00 0.00 4.41
4537 4884 1.930908 GAGAATGGTGGTGCTGCTGC 61.931 60.000 8.89 8.89 40.20 5.25
4538 4885 1.975407 GAATGGTGGTGCTGCTGCT 60.975 57.895 17.00 0.00 40.48 4.24
4539 4886 1.530013 GAATGGTGGTGCTGCTGCTT 61.530 55.000 17.00 0.35 40.48 3.91
4540 4887 1.117142 AATGGTGGTGCTGCTGCTTT 61.117 50.000 17.00 0.00 40.48 3.51
4541 4888 1.812686 ATGGTGGTGCTGCTGCTTTG 61.813 55.000 17.00 0.00 40.48 2.77
4542 4889 2.337532 GTGGTGCTGCTGCTTTGG 59.662 61.111 17.00 0.00 40.48 3.28
4543 4890 3.608662 TGGTGCTGCTGCTTTGGC 61.609 61.111 17.00 1.05 40.48 4.52
4544 4891 3.300765 GGTGCTGCTGCTTTGGCT 61.301 61.111 17.00 0.00 40.48 4.75
4545 4892 2.257676 GTGCTGCTGCTTTGGCTC 59.742 61.111 17.00 0.00 40.48 4.70
4546 4893 2.987547 TGCTGCTGCTTTGGCTCC 60.988 61.111 17.00 0.00 40.48 4.70
4547 4894 2.675772 GCTGCTGCTTTGGCTCCT 60.676 61.111 8.53 0.00 39.59 3.69
4548 4895 2.698763 GCTGCTGCTTTGGCTCCTC 61.699 63.158 8.53 0.00 39.59 3.71
4549 4896 1.002379 CTGCTGCTTTGGCTCCTCT 60.002 57.895 0.00 0.00 39.59 3.69
4550 4897 1.303074 TGCTGCTTTGGCTCCTCTG 60.303 57.895 0.00 0.00 39.59 3.35
4551 4898 2.045131 GCTGCTTTGGCTCCTCTGG 61.045 63.158 0.00 0.00 39.59 3.86
4552 4899 2.034687 TGCTTTGGCTCCTCTGGC 59.965 61.111 0.00 0.00 39.59 4.85
4553 4900 2.034687 GCTTTGGCTCCTCTGGCA 59.965 61.111 0.00 0.00 40.80 4.92
4554 4901 2.045131 GCTTTGGCTCCTCTGGCAG 61.045 63.158 8.58 8.58 43.29 4.85
4555 4902 1.378250 CTTTGGCTCCTCTGGCAGG 60.378 63.158 15.73 5.31 45.15 4.85
4563 4910 4.268687 CTCTGGCAGGACGTTGAC 57.731 61.111 15.73 0.00 0.00 3.18
4564 4911 1.374758 CTCTGGCAGGACGTTGACC 60.375 63.158 15.73 0.00 0.00 4.02
4565 4912 2.738521 CTGGCAGGACGTTGACCG 60.739 66.667 6.61 0.00 44.03 4.79
4566 4913 4.308458 TGGCAGGACGTTGACCGG 62.308 66.667 0.00 0.00 42.24 5.28
4568 4915 4.309950 GCAGGACGTTGACCGGGT 62.310 66.667 6.32 0.00 42.24 5.28
4569 4916 2.424302 CAGGACGTTGACCGGGTT 59.576 61.111 6.32 0.00 42.24 4.11
4570 4917 1.959226 CAGGACGTTGACCGGGTTG 60.959 63.158 6.32 0.00 42.24 3.77
4571 4918 2.135581 AGGACGTTGACCGGGTTGA 61.136 57.895 6.32 0.00 42.24 3.18
4572 4919 1.004200 GGACGTTGACCGGGTTGAT 60.004 57.895 6.32 0.00 42.24 2.57
4573 4920 1.296056 GGACGTTGACCGGGTTGATG 61.296 60.000 6.32 1.19 42.24 3.07
4574 4921 1.296056 GACGTTGACCGGGTTGATGG 61.296 60.000 6.32 0.00 42.24 3.51
4575 4922 1.302192 CGTTGACCGGGTTGATGGT 60.302 57.895 6.32 0.00 42.42 3.55
4576 4923 1.573829 CGTTGACCGGGTTGATGGTG 61.574 60.000 6.32 0.00 38.99 4.17
4577 4924 0.536460 GTTGACCGGGTTGATGGTGT 60.536 55.000 6.32 0.00 38.99 4.16
4578 4925 0.536233 TTGACCGGGTTGATGGTGTG 60.536 55.000 6.32 0.00 38.99 3.82
4579 4926 2.282180 ACCGGGTTGATGGTGTGC 60.282 61.111 6.32 0.00 37.02 4.57
4580 4927 3.061848 CCGGGTTGATGGTGTGCC 61.062 66.667 0.00 0.00 0.00 5.01
4581 4928 2.034066 CGGGTTGATGGTGTGCCT 59.966 61.111 0.00 0.00 35.27 4.75
4582 4929 2.040544 CGGGTTGATGGTGTGCCTC 61.041 63.158 0.00 0.00 35.27 4.70
4583 4930 1.380302 GGGTTGATGGTGTGCCTCT 59.620 57.895 0.00 0.00 35.27 3.69
4584 4931 0.962356 GGGTTGATGGTGTGCCTCTG 60.962 60.000 0.00 0.00 35.27 3.35
4585 4932 1.589716 GGTTGATGGTGTGCCTCTGC 61.590 60.000 0.00 0.00 35.27 4.26
4586 4933 1.672030 TTGATGGTGTGCCTCTGCG 60.672 57.895 0.00 0.00 41.78 5.18
4593 4940 3.426568 GTGCCTCTGCGCTTCACC 61.427 66.667 9.73 0.00 44.66 4.02
4594 4941 3.939939 TGCCTCTGCGCTTCACCA 61.940 61.111 9.73 0.00 41.78 4.17
4595 4942 2.669569 GCCTCTGCGCTTCACCAA 60.670 61.111 9.73 0.00 0.00 3.67
4596 4943 2.970974 GCCTCTGCGCTTCACCAAC 61.971 63.158 9.73 0.00 0.00 3.77
4597 4944 1.597854 CCTCTGCGCTTCACCAACA 60.598 57.895 9.73 0.00 0.00 3.33
4598 4945 1.572085 CCTCTGCGCTTCACCAACAG 61.572 60.000 9.73 0.00 0.00 3.16
4599 4946 1.572085 CTCTGCGCTTCACCAACAGG 61.572 60.000 9.73 0.00 0.00 4.00
4600 4947 2.594303 TGCGCTTCACCAACAGGG 60.594 61.111 9.73 0.00 44.81 4.45
4612 4959 3.923017 CCAACAGGGTTGACTTTGATC 57.077 47.619 10.48 0.00 0.00 2.92
4613 4960 3.221771 CCAACAGGGTTGACTTTGATCA 58.778 45.455 10.48 0.00 0.00 2.92
4614 4961 3.636300 CCAACAGGGTTGACTTTGATCAA 59.364 43.478 3.38 3.38 36.23 2.57
4615 4962 4.261741 CCAACAGGGTTGACTTTGATCAAG 60.262 45.833 8.41 5.87 39.25 3.02
4617 4964 4.536765 ACAGGGTTGACTTTGATCAAGTT 58.463 39.130 8.41 0.00 46.53 2.66
4618 4965 5.690865 ACAGGGTTGACTTTGATCAAGTTA 58.309 37.500 8.41 3.70 46.53 2.24
4619 4966 5.531287 ACAGGGTTGACTTTGATCAAGTTAC 59.469 40.000 8.41 10.44 46.53 2.50
4620 4967 5.048713 CAGGGTTGACTTTGATCAAGTTACC 60.049 44.000 20.25 20.25 46.53 2.85
4621 4968 4.083484 GGGTTGACTTTGATCAAGTTACCG 60.083 45.833 8.41 0.00 46.53 4.02
4622 4969 4.083484 GGTTGACTTTGATCAAGTTACCGG 60.083 45.833 8.41 0.00 46.53 5.28
4623 4970 3.071479 TGACTTTGATCAAGTTACCGGC 58.929 45.455 8.41 0.00 46.53 6.13
4624 4971 2.418976 GACTTTGATCAAGTTACCGGCC 59.581 50.000 8.41 0.00 46.53 6.13
4625 4972 2.224670 ACTTTGATCAAGTTACCGGCCA 60.225 45.455 8.41 0.00 43.89 5.36
4626 4973 2.570415 TTGATCAAGTTACCGGCCAA 57.430 45.000 3.38 0.00 0.00 4.52
4627 4974 2.107950 TGATCAAGTTACCGGCCAAG 57.892 50.000 0.00 0.00 0.00 3.61
4628 4975 1.349688 TGATCAAGTTACCGGCCAAGT 59.650 47.619 0.00 1.20 0.00 3.16
4629 4976 2.007608 GATCAAGTTACCGGCCAAGTC 58.992 52.381 0.00 0.00 0.00 3.01
4630 4977 1.053424 TCAAGTTACCGGCCAAGTCT 58.947 50.000 0.00 0.00 0.00 3.24
4631 4978 2.250031 TCAAGTTACCGGCCAAGTCTA 58.750 47.619 0.00 0.00 0.00 2.59
4632 4979 2.835764 TCAAGTTACCGGCCAAGTCTAT 59.164 45.455 0.00 0.00 0.00 1.98
4633 4980 3.262405 TCAAGTTACCGGCCAAGTCTATT 59.738 43.478 0.00 0.00 0.00 1.73
4634 4981 3.994931 AGTTACCGGCCAAGTCTATTT 57.005 42.857 0.00 0.00 0.00 1.40
4635 4982 3.870274 AGTTACCGGCCAAGTCTATTTC 58.130 45.455 0.00 0.00 0.00 2.17
4636 4983 3.262405 AGTTACCGGCCAAGTCTATTTCA 59.738 43.478 0.00 0.00 0.00 2.69
4637 4984 2.109425 ACCGGCCAAGTCTATTTCAC 57.891 50.000 0.00 0.00 0.00 3.18
4638 4985 1.339727 ACCGGCCAAGTCTATTTCACC 60.340 52.381 0.00 0.00 0.00 4.02
4639 4986 1.006832 CGGCCAAGTCTATTTCACCG 58.993 55.000 2.24 0.00 0.00 4.94
4640 4987 1.404986 CGGCCAAGTCTATTTCACCGA 60.405 52.381 2.24 0.00 41.86 4.69
4641 4988 2.007608 GGCCAAGTCTATTTCACCGAC 58.992 52.381 0.00 0.00 0.00 4.79
4642 4989 2.614481 GGCCAAGTCTATTTCACCGACA 60.614 50.000 0.00 0.00 0.00 4.35
4643 4990 2.673368 GCCAAGTCTATTTCACCGACAG 59.327 50.000 0.00 0.00 0.00 3.51
4644 4991 2.673368 CCAAGTCTATTTCACCGACAGC 59.327 50.000 0.00 0.00 0.00 4.40
4645 4992 3.589988 CAAGTCTATTTCACCGACAGCT 58.410 45.455 0.00 0.00 0.00 4.24
4646 4993 3.512033 AGTCTATTTCACCGACAGCTC 57.488 47.619 0.00 0.00 0.00 4.09
4647 4994 2.159366 AGTCTATTTCACCGACAGCTCG 60.159 50.000 0.00 0.00 39.83 5.03
4648 4995 2.089201 TCTATTTCACCGACAGCTCGA 58.911 47.619 0.00 0.00 43.06 4.04
4649 4996 2.688446 TCTATTTCACCGACAGCTCGAT 59.312 45.455 0.00 0.00 43.06 3.59
4650 4997 1.645034 ATTTCACCGACAGCTCGATG 58.355 50.000 0.00 0.00 43.06 3.84
4651 4998 1.014044 TTTCACCGACAGCTCGATGC 61.014 55.000 0.00 0.00 43.06 3.91
4652 4999 2.125952 CACCGACAGCTCGATGCA 60.126 61.111 9.09 0.00 43.06 3.96
4653 5000 2.163390 CACCGACAGCTCGATGCAG 61.163 63.158 9.09 4.20 43.06 4.41
4654 5001 2.182791 CCGACAGCTCGATGCAGT 59.817 61.111 9.09 7.03 44.22 4.40
4655 5002 1.313091 ACCGACAGCTCGATGCAGTA 61.313 55.000 9.09 0.00 41.56 2.74
4656 5003 0.867753 CCGACAGCTCGATGCAGTAC 60.868 60.000 9.09 0.00 41.56 2.73
4657 5004 0.179163 CGACAGCTCGATGCAGTACA 60.179 55.000 9.09 0.00 41.56 2.90
4658 5005 1.732405 CGACAGCTCGATGCAGTACAA 60.732 52.381 9.09 0.00 41.56 2.41
4659 5006 1.923204 GACAGCTCGATGCAGTACAAG 59.077 52.381 9.09 0.00 41.56 3.16
4660 5007 1.546029 ACAGCTCGATGCAGTACAAGA 59.454 47.619 9.09 0.00 45.94 3.02
4661 5008 2.191802 CAGCTCGATGCAGTACAAGAG 58.808 52.381 9.09 0.00 45.94 2.85
4662 5009 1.135915 AGCTCGATGCAGTACAAGAGG 59.864 52.381 9.09 0.00 45.94 3.69
4663 5010 1.134965 GCTCGATGCAGTACAAGAGGT 60.135 52.381 0.00 0.00 42.31 3.85
4664 5011 2.803451 CTCGATGCAGTACAAGAGGTC 58.197 52.381 0.00 0.00 35.00 3.85
4665 5012 1.132453 TCGATGCAGTACAAGAGGTCG 59.868 52.381 0.00 0.00 0.00 4.79
4666 5013 1.281899 GATGCAGTACAAGAGGTCGC 58.718 55.000 0.00 0.00 0.00 5.19
4667 5014 0.608130 ATGCAGTACAAGAGGTCGCA 59.392 50.000 0.00 0.00 0.00 5.10
4668 5015 0.038251 TGCAGTACAAGAGGTCGCAG 60.038 55.000 0.00 0.00 0.00 5.18
4669 5016 1.355066 GCAGTACAAGAGGTCGCAGC 61.355 60.000 0.00 0.00 0.00 5.25
4670 5017 0.038251 CAGTACAAGAGGTCGCAGCA 60.038 55.000 0.00 0.00 0.00 4.41
4671 5018 0.898320 AGTACAAGAGGTCGCAGCAT 59.102 50.000 0.00 0.00 0.00 3.79
4672 5019 1.002366 GTACAAGAGGTCGCAGCATG 58.998 55.000 0.00 0.00 40.87 4.06
4673 5020 0.894835 TACAAGAGGTCGCAGCATGA 59.105 50.000 0.00 0.00 39.69 3.07
4674 5021 0.390866 ACAAGAGGTCGCAGCATGAG 60.391 55.000 0.00 0.00 39.69 2.90
4675 5022 0.108472 CAAGAGGTCGCAGCATGAGA 60.108 55.000 0.00 0.00 44.58 3.27
4680 5027 4.842292 TCGCAGCATGAGATGGTC 57.158 55.556 0.00 0.00 40.97 4.02
4681 5028 1.899617 TCGCAGCATGAGATGGTCA 59.100 52.632 0.00 0.00 40.97 4.02
4682 5029 0.460811 TCGCAGCATGAGATGGTCAC 60.461 55.000 0.00 0.00 40.97 3.67
4683 5030 1.434622 CGCAGCATGAGATGGTCACC 61.435 60.000 0.00 0.00 38.60 4.02
4684 5031 0.393402 GCAGCATGAGATGGTCACCA 60.393 55.000 0.00 0.00 39.69 4.17
4685 5032 1.376543 CAGCATGAGATGGTCACCAC 58.623 55.000 0.00 0.00 39.69 4.16
4686 5033 1.065636 CAGCATGAGATGGTCACCACT 60.066 52.381 0.00 0.00 39.69 4.00
4687 5034 1.209019 AGCATGAGATGGTCACCACTC 59.791 52.381 15.75 15.75 38.28 3.51
4688 5035 1.065926 GCATGAGATGGTCACCACTCA 60.066 52.381 23.31 23.31 41.75 3.41
4689 5036 2.625737 CATGAGATGGTCACCACTCAC 58.374 52.381 23.47 11.90 41.03 3.51
4690 5037 0.976641 TGAGATGGTCACCACTCACC 59.023 55.000 19.48 7.81 37.04 4.02
4691 5038 0.976641 GAGATGGTCACCACTCACCA 59.023 55.000 17.05 0.00 46.84 4.17
4692 5039 1.347707 GAGATGGTCACCACTCACCAA 59.652 52.381 17.05 0.00 45.91 3.67
4693 5040 1.349026 AGATGGTCACCACTCACCAAG 59.651 52.381 0.00 0.00 45.91 3.61
4694 5041 1.347707 GATGGTCACCACTCACCAAGA 59.652 52.381 0.00 0.00 45.91 3.02
4695 5042 0.468226 TGGTCACCACTCACCAAGAC 59.532 55.000 0.00 0.00 39.85 3.01
4696 5043 0.468226 GGTCACCACTCACCAAGACA 59.532 55.000 0.00 0.00 32.33 3.41
4697 5044 1.541233 GGTCACCACTCACCAAGACAG 60.541 57.143 0.00 0.00 32.33 3.51
4698 5045 0.758734 TCACCACTCACCAAGACAGG 59.241 55.000 0.00 0.00 0.00 4.00
4699 5046 0.250467 CACCACTCACCAAGACAGGG 60.250 60.000 0.00 0.00 0.00 4.45
4700 5047 1.376466 CCACTCACCAAGACAGGGG 59.624 63.158 0.00 0.00 0.00 4.79
4701 5048 1.127567 CCACTCACCAAGACAGGGGA 61.128 60.000 0.00 0.00 39.24 4.81
4702 5049 0.987294 CACTCACCAAGACAGGGGAT 59.013 55.000 0.00 0.00 41.11 3.85
4703 5050 1.352352 CACTCACCAAGACAGGGGATT 59.648 52.381 0.00 0.00 41.11 3.01
4704 5051 1.630878 ACTCACCAAGACAGGGGATTC 59.369 52.381 0.00 0.00 41.11 2.52
4705 5052 0.613260 TCACCAAGACAGGGGATTCG 59.387 55.000 0.00 0.00 35.77 3.34
4706 5053 0.613260 CACCAAGACAGGGGATTCGA 59.387 55.000 0.00 0.00 32.15 3.71
4707 5054 0.613777 ACCAAGACAGGGGATTCGAC 59.386 55.000 0.00 0.00 0.00 4.20
4708 5055 0.460284 CCAAGACAGGGGATTCGACG 60.460 60.000 0.00 0.00 0.00 5.12
4709 5056 0.460284 CAAGACAGGGGATTCGACGG 60.460 60.000 0.00 0.00 0.00 4.79
4710 5057 1.614241 AAGACAGGGGATTCGACGGG 61.614 60.000 0.00 0.00 0.00 5.28
4711 5058 3.735037 GACAGGGGATTCGACGGGC 62.735 68.421 0.00 0.00 0.00 6.13
4712 5059 4.547367 CAGGGGATTCGACGGGCC 62.547 72.222 0.00 0.00 0.00 5.80
4722 5069 4.241555 GACGGGCCGCCTCATGAT 62.242 66.667 28.71 2.71 0.00 2.45
4723 5070 4.552365 ACGGGCCGCCTCATGATG 62.552 66.667 28.71 0.00 0.00 3.07
4724 5071 4.552365 CGGGCCGCCTCATGATGT 62.552 66.667 15.42 0.00 0.00 3.06
4725 5072 2.828868 GGGCCGCCTCATGATGTA 59.171 61.111 9.86 0.00 0.00 2.29
4726 5073 1.598130 GGGCCGCCTCATGATGTAC 60.598 63.158 9.86 0.00 0.00 2.90
4727 5074 1.956170 GGCCGCCTCATGATGTACG 60.956 63.158 0.71 0.00 0.00 3.67
4728 5075 1.067416 GCCGCCTCATGATGTACGA 59.933 57.895 0.00 0.00 0.00 3.43
4729 5076 1.215655 GCCGCCTCATGATGTACGAC 61.216 60.000 0.00 0.00 0.00 4.34
4730 5077 0.597637 CCGCCTCATGATGTACGACC 60.598 60.000 0.00 0.00 0.00 4.79
4731 5078 0.597637 CGCCTCATGATGTACGACCC 60.598 60.000 0.00 0.00 0.00 4.46
4732 5079 0.464036 GCCTCATGATGTACGACCCA 59.536 55.000 0.00 0.00 0.00 4.51
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
112 127 2.146061 GGAGGAGGAGGAGGCATGG 61.146 68.421 0.00 0.00 0.00 3.66
113 128 1.383664 TGGAGGAGGAGGAGGCATG 60.384 63.158 0.00 0.00 0.00 4.06
114 129 1.383803 GTGGAGGAGGAGGAGGCAT 60.384 63.158 0.00 0.00 0.00 4.40
115 130 2.039624 GTGGAGGAGGAGGAGGCA 59.960 66.667 0.00 0.00 0.00 4.75
116 131 2.766229 GGTGGAGGAGGAGGAGGC 60.766 72.222 0.00 0.00 0.00 4.70
131 150 1.000618 GAAAAGGACGAACGAGGAGGT 59.999 52.381 0.14 0.00 0.00 3.85
146 165 3.181516 CCGAATCAAAGGAGCTCGAAAAG 60.182 47.826 7.83 0.00 35.45 2.27
152 171 2.386661 TGTCCGAATCAAAGGAGCTC 57.613 50.000 4.71 4.71 37.18 4.09
153 172 2.859165 TTGTCCGAATCAAAGGAGCT 57.141 45.000 0.00 0.00 37.18 4.09
154 173 2.414691 GCTTTGTCCGAATCAAAGGAGC 60.415 50.000 19.84 9.59 46.56 4.70
156 175 3.074412 GAGCTTTGTCCGAATCAAAGGA 58.926 45.455 19.84 0.00 46.56 3.36
157 176 2.162408 GGAGCTTTGTCCGAATCAAAGG 59.838 50.000 19.84 8.92 46.56 3.11
160 179 2.559698 TGGAGCTTTGTCCGAATCAA 57.440 45.000 0.00 0.00 39.81 2.57
161 180 2.787473 ATGGAGCTTTGTCCGAATCA 57.213 45.000 0.00 0.00 39.81 2.57
162 181 4.034510 CAGTAATGGAGCTTTGTCCGAATC 59.965 45.833 0.00 0.00 39.81 2.52
163 182 3.941483 CAGTAATGGAGCTTTGTCCGAAT 59.059 43.478 0.00 0.00 39.81 3.34
165 184 2.301870 ACAGTAATGGAGCTTTGTCCGA 59.698 45.455 0.00 0.00 39.81 4.55
166 185 2.416547 CACAGTAATGGAGCTTTGTCCG 59.583 50.000 0.00 0.00 39.81 4.79
167 186 2.162408 GCACAGTAATGGAGCTTTGTCC 59.838 50.000 0.00 0.00 37.10 4.02
168 187 3.077359 AGCACAGTAATGGAGCTTTGTC 58.923 45.455 6.57 0.00 29.98 3.18
169 188 3.146104 AGCACAGTAATGGAGCTTTGT 57.854 42.857 6.57 0.00 29.98 2.83
170 189 3.503363 TCAAGCACAGTAATGGAGCTTTG 59.497 43.478 18.36 14.55 43.06 2.77
171 190 3.503748 GTCAAGCACAGTAATGGAGCTTT 59.496 43.478 18.36 5.86 43.06 3.51
172 191 3.077359 GTCAAGCACAGTAATGGAGCTT 58.923 45.455 16.13 16.13 45.54 3.74
173 192 2.704572 GTCAAGCACAGTAATGGAGCT 58.295 47.619 6.57 6.57 37.08 4.09
174 193 1.394917 CGTCAAGCACAGTAATGGAGC 59.605 52.381 0.00 0.00 0.00 4.70
175 194 2.002586 CCGTCAAGCACAGTAATGGAG 58.997 52.381 0.00 0.00 0.00 3.86
183 207 1.227823 TGGAACCCGTCAAGCACAG 60.228 57.895 0.00 0.00 0.00 3.66
206 230 2.406205 TTTGGCGCCAAAACTACGT 58.594 47.368 43.97 0.00 42.16 3.57
238 262 4.820173 CGAAGAAAGAGGTAAACAAACCCT 59.180 41.667 0.00 0.00 40.71 4.34
251 289 1.192793 GCGGATCGTCGAAGAAAGAG 58.807 55.000 4.85 0.00 39.69 2.85
287 325 1.675310 CAAATGACCGCCAGCCAGA 60.675 57.895 0.00 0.00 0.00 3.86
288 326 2.703798 CCAAATGACCGCCAGCCAG 61.704 63.158 0.00 0.00 0.00 4.85
290 328 2.830186 TACCCAAATGACCGCCAGCC 62.830 60.000 0.00 0.00 0.00 4.85
297 336 5.070685 ACAAGAAAGAGTACCCAAATGACC 58.929 41.667 0.00 0.00 0.00 4.02
299 338 7.417342 CCAAAACAAGAAAGAGTACCCAAATGA 60.417 37.037 0.00 0.00 0.00 2.57
317 356 3.165875 TGAAACCAGACCACCAAAACAA 58.834 40.909 0.00 0.00 0.00 2.83
341 380 7.206687 GCTGTAGCTCACATATACTCTTTTCT 58.793 38.462 0.00 0.00 36.29 2.52
342 381 6.422400 GGCTGTAGCTCACATATACTCTTTTC 59.578 42.308 3.63 0.00 41.70 2.29
362 404 0.954452 GCTGTTGTTGCTAAGGCTGT 59.046 50.000 0.00 0.00 39.59 4.40
369 411 1.965930 CGGCCTGCTGTTGTTGCTA 60.966 57.895 0.00 0.00 0.00 3.49
397 439 7.813087 ATTTTTCTGAAATGGTATTTCCCCT 57.187 32.000 3.31 0.00 34.77 4.79
398 440 8.977412 TCTATTTTTCTGAAATGGTATTTCCCC 58.023 33.333 3.31 0.00 34.77 4.81
414 457 6.486993 GTGGACAACTGACCTTCTATTTTTCT 59.513 38.462 0.10 0.00 0.00 2.52
417 460 5.070685 GGTGGACAACTGACCTTCTATTTT 58.929 41.667 0.10 0.00 0.00 1.82
429 472 1.675552 AAGAAACCGGTGGACAACTG 58.324 50.000 8.52 0.00 34.63 3.16
469 512 3.331478 AGAGCAACAGTCCTGAATGAG 57.669 47.619 1.11 0.00 0.00 2.90
496 546 7.453393 ACAGATCACACCAAGAAGAGAAAATA 58.547 34.615 0.00 0.00 0.00 1.40
497 547 6.302269 ACAGATCACACCAAGAAGAGAAAAT 58.698 36.000 0.00 0.00 0.00 1.82
498 548 5.684704 ACAGATCACACCAAGAAGAGAAAA 58.315 37.500 0.00 0.00 0.00 2.29
501 551 4.344968 TGAACAGATCACACCAAGAAGAGA 59.655 41.667 0.00 0.00 31.50 3.10
502 552 4.635223 TGAACAGATCACACCAAGAAGAG 58.365 43.478 0.00 0.00 31.50 2.85
503 553 4.687901 TGAACAGATCACACCAAGAAGA 57.312 40.909 0.00 0.00 31.50 2.87
504 554 4.818546 ACTTGAACAGATCACACCAAGAAG 59.181 41.667 18.37 4.44 37.92 2.85
512 562 7.148103 TGTGAATGAAAACTTGAACAGATCACA 60.148 33.333 0.00 0.00 38.92 3.58
518 568 7.121272 GCATTTGTGAATGAAAACTTGAACAG 58.879 34.615 3.47 0.00 44.37 3.16
520 570 6.036953 TGGCATTTGTGAATGAAAACTTGAAC 59.963 34.615 3.47 0.00 44.37 3.18
522 572 5.668471 TGGCATTTGTGAATGAAAACTTGA 58.332 33.333 3.47 0.00 44.37 3.02
525 575 5.613329 ACATGGCATTTGTGAATGAAAACT 58.387 33.333 0.00 0.00 44.37 2.66
526 576 5.927954 ACATGGCATTTGTGAATGAAAAC 57.072 34.783 0.00 0.00 44.37 2.43
527 577 6.757237 AGTACATGGCATTTGTGAATGAAAA 58.243 32.000 0.00 0.00 44.37 2.29
528 578 6.343716 AGTACATGGCATTTGTGAATGAAA 57.656 33.333 0.00 0.00 44.37 2.69
529 579 5.105797 GGAGTACATGGCATTTGTGAATGAA 60.106 40.000 0.00 0.00 44.37 2.57
530 580 4.398988 GGAGTACATGGCATTTGTGAATGA 59.601 41.667 0.00 0.00 44.37 2.57
531 581 4.440525 GGGAGTACATGGCATTTGTGAATG 60.441 45.833 0.00 0.00 44.42 2.67
559 609 9.847224 CAGGGAAAAGGTAGCTATATTTCTTTA 57.153 33.333 19.50 0.00 32.14 1.85
560 610 8.557450 TCAGGGAAAAGGTAGCTATATTTCTTT 58.443 33.333 19.50 12.36 32.14 2.52
562 612 7.691993 TCAGGGAAAAGGTAGCTATATTTCT 57.308 36.000 19.50 7.59 32.14 2.52
563 613 7.939588 ACATCAGGGAAAAGGTAGCTATATTTC 59.060 37.037 15.20 15.20 0.00 2.17
564 614 7.721399 CACATCAGGGAAAAGGTAGCTATATTT 59.279 37.037 0.00 0.00 0.00 1.40
565 615 7.147302 ACACATCAGGGAAAAGGTAGCTATATT 60.147 37.037 0.00 0.00 0.00 1.28
567 617 5.665812 ACACATCAGGGAAAAGGTAGCTATA 59.334 40.000 0.00 0.00 0.00 1.31
568 618 4.475016 ACACATCAGGGAAAAGGTAGCTAT 59.525 41.667 0.00 0.00 0.00 2.97
590 718 5.052370 CGCAGAGCAAGTTTAAGAAAACAAC 60.052 40.000 4.04 0.00 46.18 3.32
593 721 4.598062 ACGCAGAGCAAGTTTAAGAAAAC 58.402 39.130 0.00 0.00 44.47 2.43
613 741 9.292846 TGTTACTAGTATAACACTGCATAAACG 57.707 33.333 2.79 0.00 39.56 3.60
616 744 9.256477 GCATGTTACTAGTATAACACTGCATAA 57.744 33.333 23.48 2.95 45.39 1.90
625 753 6.216750 GCAGCAGCATGTTACTAGTATAAC 57.783 41.667 2.79 2.41 41.58 1.89
653 781 6.882656 TCAGATATTTAGCTATCATGAGGGC 58.117 40.000 12.90 12.90 31.69 5.19
707 840 9.143631 GCTCAATAATTCAGCTTTTGTGTATTT 57.856 29.630 0.00 0.00 0.00 1.40
717 850 3.012518 ACGCTGCTCAATAATTCAGCTT 58.987 40.909 11.43 1.45 46.95 3.74
732 865 8.472683 AGAAGAGATTAATATGAATACGCTGC 57.527 34.615 0.00 0.00 0.00 5.25
743 876 9.620259 GGAAACTGTTGGAGAAGAGATTAATAT 57.380 33.333 0.00 0.00 0.00 1.28
819 956 7.793902 ACATCAACGTGTATGAGTAAAAGAAC 58.206 34.615 15.22 0.00 0.00 3.01
824 961 6.588756 GGAGAACATCAACGTGTATGAGTAAA 59.411 38.462 15.22 0.00 0.00 2.01
831 968 3.513912 TGAGGGAGAACATCAACGTGTAT 59.486 43.478 0.00 0.00 0.00 2.29
832 969 2.894765 TGAGGGAGAACATCAACGTGTA 59.105 45.455 0.00 0.00 0.00 2.90
848 985 6.316140 TGAAAAACAGATAATCGATGTGAGGG 59.684 38.462 0.00 0.00 33.03 4.30
852 989 8.955061 AACTTGAAAAACAGATAATCGATGTG 57.045 30.769 0.00 0.00 34.93 3.21
904 1066 3.744530 GCACACCTAGAAAGTCACAACCT 60.745 47.826 0.00 0.00 0.00 3.50
906 1068 2.548480 GGCACACCTAGAAAGTCACAAC 59.452 50.000 0.00 0.00 0.00 3.32
1200 1426 4.125703 CACTATCATCAGCTTCTTGGGTC 58.874 47.826 0.00 0.00 0.00 4.46
1211 1437 4.499865 CCCAAGTACGACCACTATCATCAG 60.500 50.000 0.00 0.00 0.00 2.90
1282 1508 0.550914 TCTTGGTTTGGAGCAGTGGT 59.449 50.000 0.00 0.00 34.28 4.16
2071 2312 4.655762 TGATGTAGATGAAGAAGGACCG 57.344 45.455 0.00 0.00 0.00 4.79
2097 2338 2.381838 TTTGCTCCTGCGCTGTCTGA 62.382 55.000 9.73 0.00 43.34 3.27
2370 2611 4.161333 CGACAGATTTCATTTTGCCAGAC 58.839 43.478 0.00 0.00 0.00 3.51
2426 2667 0.887836 ACATGTGACCAGCAGCACTG 60.888 55.000 0.00 0.00 46.77 3.66
2487 2731 6.935771 CAGGATCCTTGGATATCTTCTTCTTG 59.064 42.308 13.00 0.00 0.00 3.02
2556 2800 0.464916 TAGCTGACCGTGATCCGCTA 60.465 55.000 0.00 0.00 39.54 4.26
2568 2812 2.000447 GTGTTTCCCGACATAGCTGAC 59.000 52.381 0.00 0.00 0.00 3.51
2607 2851 2.413142 GCAGAGGTTGGATGGCAGC 61.413 63.158 0.00 0.00 0.00 5.25
2667 2911 3.900888 AGGAAGGCCTGGTCGAAA 58.099 55.556 5.69 0.00 44.90 3.46
2959 3215 2.025767 ATGCAGATCTCGAGCCGCTT 62.026 55.000 7.81 2.94 0.00 4.68
3531 3802 2.265904 CGACGACAGTGTCCCCTCA 61.266 63.158 17.57 0.00 35.40 3.86
3564 3838 0.528017 GCAGTCTGGTCATGACGAGA 59.472 55.000 29.99 29.99 42.55 4.04
3667 3944 4.436998 CAGCCCGTCCGAGTCCAC 62.437 72.222 0.00 0.00 0.00 4.02
3750 4027 1.980765 TGTCCAAGAATCTGCAGAGGT 59.019 47.619 22.96 12.55 0.00 3.85
3764 4041 2.955660 GTGGACCAAGAATGTTGTCCAA 59.044 45.455 11.46 0.00 41.82 3.53
3790 4067 4.935808 AGTAATTACTAGCACCTGCAACAC 59.064 41.667 16.60 0.00 45.16 3.32
3857 4137 5.934402 AAGTGACTCCGTACCTGAATTAT 57.066 39.130 0.00 0.00 0.00 1.28
3889 4169 5.530543 TGTCCGGTACATACAATACATACGA 59.469 40.000 0.00 0.00 31.43 3.43
3890 4170 5.761003 TGTCCGGTACATACAATACATACG 58.239 41.667 0.00 0.00 31.43 3.06
3962 4246 9.912634 TTCCATTCACAAAATTCAGATAAGAAC 57.087 29.630 0.00 0.00 0.00 3.01
4019 4323 3.004734 AGGCATTTTTCTTTCGGTCACAG 59.995 43.478 0.00 0.00 0.00 3.66
4023 4327 3.753797 AGAGAGGCATTTTTCTTTCGGTC 59.246 43.478 0.00 0.00 0.00 4.79
4062 4366 1.959710 TACAGGCCCTCACCAATGTA 58.040 50.000 0.00 0.00 0.00 2.29
4063 4367 1.072266 TTACAGGCCCTCACCAATGT 58.928 50.000 0.00 0.00 0.00 2.71
4071 4375 3.686016 TCATTTTGAGTTACAGGCCCTC 58.314 45.455 0.00 0.00 0.00 4.30
4091 4395 8.066612 TCCTAGGAATGAAATCCAACAAAATC 57.933 34.615 9.71 0.00 42.27 2.17
4092 4396 8.613922 ATCCTAGGAATGAAATCCAACAAAAT 57.386 30.769 17.30 0.00 42.27 1.82
4111 4415 6.210287 ACTACAGGAAAGACGAAATCCTAG 57.790 41.667 0.00 0.00 41.63 3.02
4114 4418 9.843334 CTATATACTACAGGAAAGACGAAATCC 57.157 37.037 0.00 0.00 0.00 3.01
4121 4425 8.852135 ACAAGCTCTATATACTACAGGAAAGAC 58.148 37.037 0.00 0.00 0.00 3.01
4128 4432 9.035607 CAACCAAACAAGCTCTATATACTACAG 57.964 37.037 0.00 0.00 0.00 2.74
4130 4434 7.711339 AGCAACCAAACAAGCTCTATATACTAC 59.289 37.037 0.00 0.00 30.05 2.73
4190 4497 9.566432 ACTGGGCACAAATTTTATTTGAAAATA 57.434 25.926 16.58 0.00 33.83 1.40
4225 4536 1.001633 GTTACTCACGGCCTCAAGGAA 59.998 52.381 0.00 0.00 37.39 3.36
4237 4549 4.929808 AGGTGATGAAACATCGTTACTCAC 59.070 41.667 7.14 0.00 0.00 3.51
4243 4555 3.417069 TCCAGGTGATGAAACATCGTT 57.583 42.857 7.14 0.00 0.00 3.85
4245 4557 4.439153 CCATTTCCAGGTGATGAAACATCG 60.439 45.833 7.14 0.00 33.64 3.84
4246 4558 4.706476 TCCATTTCCAGGTGATGAAACATC 59.294 41.667 4.98 4.98 33.64 3.06
4306 4618 8.654485 TCCCTAATTGAATACGGTAAGCTATA 57.346 34.615 0.00 0.00 0.00 1.31
4307 4619 7.234988 ACTCCCTAATTGAATACGGTAAGCTAT 59.765 37.037 0.00 0.00 0.00 2.97
4311 4623 7.654923 GGTAACTCCCTAATTGAATACGGTAAG 59.345 40.741 0.00 0.00 0.00 2.34
4312 4624 7.500141 GGTAACTCCCTAATTGAATACGGTAA 58.500 38.462 0.00 0.00 0.00 2.85
4313 4625 7.054491 GGTAACTCCCTAATTGAATACGGTA 57.946 40.000 0.00 0.00 0.00 4.02
4314 4626 5.922053 GGTAACTCCCTAATTGAATACGGT 58.078 41.667 0.00 0.00 0.00 4.83
4358 4688 0.099436 GCAAATGTGATCACGAGGCC 59.901 55.000 20.54 0.00 0.00 5.19
4364 4694 3.603770 GCGTAAGTTGCAAATGTGATCAC 59.396 43.478 19.27 19.27 41.68 3.06
4368 4698 3.266541 CAGCGTAAGTTGCAAATGTGA 57.733 42.857 0.00 0.00 43.00 3.58
4381 4711 0.170784 CCACATGCATTGCAGCGTAA 59.829 50.000 17.52 0.00 43.65 3.18
4383 4713 2.270257 ACCACATGCATTGCAGCGT 61.270 52.632 17.52 13.35 43.65 5.07
4385 4715 0.527113 TACACCACATGCATTGCAGC 59.473 50.000 17.52 0.00 43.65 5.25
4386 4716 2.424246 TCATACACCACATGCATTGCAG 59.576 45.455 17.52 11.28 43.65 4.41
4388 4718 3.720949 ATCATACACCACATGCATTGC 57.279 42.857 0.00 0.46 0.00 3.56
4390 4720 6.183360 CCCTTAAATCATACACCACATGCATT 60.183 38.462 0.00 0.00 0.00 3.56
4391 4721 5.302568 CCCTTAAATCATACACCACATGCAT 59.697 40.000 0.00 0.00 0.00 3.96
4394 4724 5.445069 TCCCCTTAAATCATACACCACATG 58.555 41.667 0.00 0.00 0.00 3.21
4411 4741 3.382832 CGTCGACAGCCTCCCCTT 61.383 66.667 17.16 0.00 0.00 3.95
4413 4743 3.148279 ATCGTCGACAGCCTCCCC 61.148 66.667 17.16 0.00 0.00 4.81
4414 4744 1.739338 ATCATCGTCGACAGCCTCCC 61.739 60.000 17.16 0.00 0.00 4.30
4415 4745 0.318275 GATCATCGTCGACAGCCTCC 60.318 60.000 17.16 0.00 0.00 4.30
4419 4749 2.211675 GCTGATCATCGTCGACAGC 58.788 57.895 17.16 16.69 44.88 4.40
4420 4750 2.200792 AAGCTGATCATCGTCGACAG 57.799 50.000 17.16 8.67 0.00 3.51
4421 4751 2.094752 TGAAAGCTGATCATCGTCGACA 60.095 45.455 17.16 3.13 0.00 4.35
4422 4752 2.530177 TGAAAGCTGATCATCGTCGAC 58.470 47.619 5.18 5.18 0.00 4.20
4424 4754 1.857217 CCTGAAAGCTGATCATCGTCG 59.143 52.381 0.00 0.00 0.00 5.12
4444 4788 8.824159 ACAATATCAGTTATGTAGTGATGAGC 57.176 34.615 9.18 0.00 44.74 4.26
4483 4830 5.431765 AGAAAGAAAGACATGACACTGTGT 58.568 37.500 14.23 14.23 0.00 3.72
4484 4831 5.998454 AGAAAGAAAGACATGACACTGTG 57.002 39.130 6.19 6.19 0.00 3.66
4485 4832 5.529060 GGAAGAAAGAAAGACATGACACTGT 59.471 40.000 0.00 0.00 0.00 3.55
4486 4833 5.333645 CGGAAGAAAGAAAGACATGACACTG 60.334 44.000 0.00 0.00 0.00 3.66
4487 4834 4.752101 CGGAAGAAAGAAAGACATGACACT 59.248 41.667 0.00 0.00 0.00 3.55
4488 4835 4.750098 TCGGAAGAAAGAAAGACATGACAC 59.250 41.667 0.00 0.00 37.03 3.67
4489 4836 4.956085 TCGGAAGAAAGAAAGACATGACA 58.044 39.130 0.00 0.00 37.03 3.58
4504 4851 3.583086 ACCATTCTCTCCTTTTCGGAAGA 59.417 43.478 1.68 0.00 42.53 2.87
4505 4852 3.686726 CACCATTCTCTCCTTTTCGGAAG 59.313 47.826 0.00 0.00 42.53 3.46
4506 4853 3.559171 CCACCATTCTCTCCTTTTCGGAA 60.559 47.826 0.00 0.00 42.53 4.30
4507 4854 2.027192 CCACCATTCTCTCCTTTTCGGA 60.027 50.000 0.00 0.00 40.30 4.55
4508 4855 2.290323 ACCACCATTCTCTCCTTTTCGG 60.290 50.000 0.00 0.00 0.00 4.30
4509 4856 2.744202 CACCACCATTCTCTCCTTTTCG 59.256 50.000 0.00 0.00 0.00 3.46
4510 4857 2.489722 GCACCACCATTCTCTCCTTTTC 59.510 50.000 0.00 0.00 0.00 2.29
4511 4858 2.108952 AGCACCACCATTCTCTCCTTTT 59.891 45.455 0.00 0.00 0.00 2.27
4512 4859 1.707427 AGCACCACCATTCTCTCCTTT 59.293 47.619 0.00 0.00 0.00 3.11
4513 4860 1.004044 CAGCACCACCATTCTCTCCTT 59.996 52.381 0.00 0.00 0.00 3.36
4514 4861 0.617413 CAGCACCACCATTCTCTCCT 59.383 55.000 0.00 0.00 0.00 3.69
4515 4862 1.028868 GCAGCACCACCATTCTCTCC 61.029 60.000 0.00 0.00 0.00 3.71
4516 4863 0.035630 AGCAGCACCACCATTCTCTC 60.036 55.000 0.00 0.00 0.00 3.20
4517 4864 0.322277 CAGCAGCACCACCATTCTCT 60.322 55.000 0.00 0.00 0.00 3.10
4518 4865 1.930908 GCAGCAGCACCACCATTCTC 61.931 60.000 0.00 0.00 41.58 2.87
4519 4866 1.975407 GCAGCAGCACCACCATTCT 60.975 57.895 0.00 0.00 41.58 2.40
4520 4867 1.530013 AAGCAGCAGCACCACCATTC 61.530 55.000 3.17 0.00 45.49 2.67
4521 4868 1.117142 AAAGCAGCAGCACCACCATT 61.117 50.000 3.17 0.00 45.49 3.16
4522 4869 1.532316 AAAGCAGCAGCACCACCAT 60.532 52.632 3.17 0.00 45.49 3.55
4523 4870 2.123769 AAAGCAGCAGCACCACCA 60.124 55.556 3.17 0.00 45.49 4.17
4524 4871 2.337532 CAAAGCAGCAGCACCACC 59.662 61.111 3.17 0.00 45.49 4.61
4525 4872 2.337532 CCAAAGCAGCAGCACCAC 59.662 61.111 3.17 0.00 45.49 4.16
4526 4873 3.608662 GCCAAAGCAGCAGCACCA 61.609 61.111 3.17 0.00 45.49 4.17
4527 4874 3.278592 GAGCCAAAGCAGCAGCACC 62.279 63.158 3.17 0.00 45.49 5.01
4528 4875 2.257676 GAGCCAAAGCAGCAGCAC 59.742 61.111 3.17 0.00 45.49 4.40
4529 4876 2.987547 GGAGCCAAAGCAGCAGCA 60.988 61.111 3.17 0.00 45.49 4.41
4530 4877 2.675772 AGGAGCCAAAGCAGCAGC 60.676 61.111 0.00 0.00 43.56 5.25
4531 4878 1.002379 AGAGGAGCCAAAGCAGCAG 60.002 57.895 0.00 0.00 43.56 4.24
4532 4879 1.303074 CAGAGGAGCCAAAGCAGCA 60.303 57.895 0.00 0.00 43.56 4.41
4533 4880 2.045131 CCAGAGGAGCCAAAGCAGC 61.045 63.158 0.00 0.00 43.56 5.25
4534 4881 2.045131 GCCAGAGGAGCCAAAGCAG 61.045 63.158 0.00 0.00 43.56 4.24
4535 4882 2.034687 GCCAGAGGAGCCAAAGCA 59.965 61.111 0.00 0.00 43.56 3.91
4536 4883 2.034687 TGCCAGAGGAGCCAAAGC 59.965 61.111 0.00 0.00 40.32 3.51
4537 4884 1.378250 CCTGCCAGAGGAGCCAAAG 60.378 63.158 0.00 0.00 46.33 2.77
4538 4885 1.847506 TCCTGCCAGAGGAGCCAAA 60.848 57.895 0.00 0.00 46.96 3.28
4539 4886 2.203983 TCCTGCCAGAGGAGCCAA 60.204 61.111 0.00 0.00 46.96 4.52
4545 4892 1.374758 GTCAACGTCCTGCCAGAGG 60.375 63.158 0.00 0.00 44.45 3.69
4546 4893 1.374758 GGTCAACGTCCTGCCAGAG 60.375 63.158 0.00 0.00 0.00 3.35
4547 4894 2.741092 GGTCAACGTCCTGCCAGA 59.259 61.111 0.00 0.00 0.00 3.86
4548 4895 2.738521 CGGTCAACGTCCTGCCAG 60.739 66.667 0.00 0.00 37.93 4.85
4549 4896 4.308458 CCGGTCAACGTCCTGCCA 62.308 66.667 0.00 0.00 42.24 4.92
4551 4898 3.819877 AACCCGGTCAACGTCCTGC 62.820 63.158 0.00 0.00 42.24 4.85
4552 4899 1.959226 CAACCCGGTCAACGTCCTG 60.959 63.158 0.00 0.00 42.24 3.86
4553 4900 1.477685 ATCAACCCGGTCAACGTCCT 61.478 55.000 0.00 0.00 42.24 3.85
4554 4901 1.004200 ATCAACCCGGTCAACGTCC 60.004 57.895 0.00 0.00 42.24 4.79
4555 4902 1.296056 CCATCAACCCGGTCAACGTC 61.296 60.000 0.00 0.00 42.24 4.34
4556 4903 1.302192 CCATCAACCCGGTCAACGT 60.302 57.895 0.00 0.00 42.24 3.99
4557 4904 1.302192 ACCATCAACCCGGTCAACG 60.302 57.895 0.00 0.00 43.80 4.10
4558 4905 0.536460 ACACCATCAACCCGGTCAAC 60.536 55.000 0.00 0.00 31.41 3.18
4559 4906 0.536233 CACACCATCAACCCGGTCAA 60.536 55.000 0.00 0.00 31.41 3.18
4560 4907 1.072332 CACACCATCAACCCGGTCA 59.928 57.895 0.00 0.00 31.41 4.02
4561 4908 2.332654 GCACACCATCAACCCGGTC 61.333 63.158 0.00 0.00 31.41 4.79
4562 4909 2.282180 GCACACCATCAACCCGGT 60.282 61.111 0.00 0.00 35.27 5.28
4563 4910 3.061848 GGCACACCATCAACCCGG 61.062 66.667 0.00 0.00 35.26 5.73
4564 4911 2.034066 AGGCACACCATCAACCCG 59.966 61.111 0.00 0.00 39.06 5.28
4565 4912 0.962356 CAGAGGCACACCATCAACCC 60.962 60.000 0.00 0.00 39.06 4.11
4566 4913 1.589716 GCAGAGGCACACCATCAACC 61.590 60.000 0.00 0.00 40.72 3.77
4567 4914 1.878775 GCAGAGGCACACCATCAAC 59.121 57.895 0.00 0.00 40.72 3.18
4568 4915 1.672030 CGCAGAGGCACACCATCAA 60.672 57.895 0.00 0.00 41.24 2.57
4569 4916 2.046988 CGCAGAGGCACACCATCA 60.047 61.111 0.00 0.00 41.24 3.07
4570 4917 3.503363 GCGCAGAGGCACACCATC 61.503 66.667 0.30 0.00 41.24 3.51
4571 4918 3.557903 AAGCGCAGAGGCACACCAT 62.558 57.895 11.47 0.00 41.24 3.55
4572 4919 4.254709 AAGCGCAGAGGCACACCA 62.255 61.111 11.47 0.00 41.24 4.17
4573 4920 3.426568 GAAGCGCAGAGGCACACC 61.427 66.667 11.47 0.00 41.24 4.16
4574 4921 2.666190 TGAAGCGCAGAGGCACAC 60.666 61.111 11.47 0.00 41.24 3.82
4575 4922 2.666190 GTGAAGCGCAGAGGCACA 60.666 61.111 11.47 0.00 41.24 4.57
4576 4923 3.426568 GGTGAAGCGCAGAGGCAC 61.427 66.667 11.47 9.77 41.24 5.01
4577 4924 3.474486 TTGGTGAAGCGCAGAGGCA 62.474 57.895 11.47 0.00 41.24 4.75
4578 4925 2.669569 TTGGTGAAGCGCAGAGGC 60.670 61.111 11.47 0.00 0.00 4.70
4579 4926 1.572085 CTGTTGGTGAAGCGCAGAGG 61.572 60.000 11.47 0.00 0.00 3.69
4580 4927 1.572085 CCTGTTGGTGAAGCGCAGAG 61.572 60.000 11.47 0.00 0.00 3.35
4581 4928 1.597854 CCTGTTGGTGAAGCGCAGA 60.598 57.895 11.47 0.00 0.00 4.26
4582 4929 2.620112 CCCTGTTGGTGAAGCGCAG 61.620 63.158 11.47 0.00 0.00 5.18
4583 4930 2.594303 CCCTGTTGGTGAAGCGCA 60.594 61.111 11.47 0.00 0.00 6.09
4592 4939 3.221771 TGATCAAAGTCAACCCTGTTGG 58.778 45.455 7.08 0.00 41.37 3.77
4593 4940 4.339247 ACTTGATCAAAGTCAACCCTGTTG 59.661 41.667 9.88 0.55 46.60 3.33
4594 4941 4.536765 ACTTGATCAAAGTCAACCCTGTT 58.463 39.130 9.88 0.00 46.60 3.16
4595 4942 4.170468 ACTTGATCAAAGTCAACCCTGT 57.830 40.909 9.88 0.00 46.60 4.00
4605 4952 2.432444 TGGCCGGTAACTTGATCAAAG 58.568 47.619 9.88 6.49 42.07 2.77
4606 4953 2.570415 TGGCCGGTAACTTGATCAAA 57.430 45.000 9.88 0.00 0.00 2.69
4607 4954 2.224670 ACTTGGCCGGTAACTTGATCAA 60.225 45.455 8.12 8.12 0.00 2.57
4608 4955 1.349688 ACTTGGCCGGTAACTTGATCA 59.650 47.619 1.90 0.00 0.00 2.92
4609 4956 2.007608 GACTTGGCCGGTAACTTGATC 58.992 52.381 1.90 0.00 0.00 2.92
4610 4957 1.628846 AGACTTGGCCGGTAACTTGAT 59.371 47.619 1.90 0.00 0.00 2.57
4611 4958 1.053424 AGACTTGGCCGGTAACTTGA 58.947 50.000 1.90 0.00 0.00 3.02
4612 4959 2.754946 TAGACTTGGCCGGTAACTTG 57.245 50.000 1.90 0.00 0.00 3.16
4613 4960 3.994931 AATAGACTTGGCCGGTAACTT 57.005 42.857 1.90 0.00 0.00 2.66
4614 4961 3.262405 TGAAATAGACTTGGCCGGTAACT 59.738 43.478 1.90 0.00 0.00 2.24
4615 4962 3.373130 GTGAAATAGACTTGGCCGGTAAC 59.627 47.826 1.90 0.00 0.00 2.50
4616 4963 3.602483 GTGAAATAGACTTGGCCGGTAA 58.398 45.455 1.90 0.00 0.00 2.85
4617 4964 2.093341 GGTGAAATAGACTTGGCCGGTA 60.093 50.000 1.90 0.00 0.00 4.02
4618 4965 1.339727 GGTGAAATAGACTTGGCCGGT 60.340 52.381 1.90 0.00 0.00 5.28
4619 4966 1.379527 GGTGAAATAGACTTGGCCGG 58.620 55.000 0.00 0.00 0.00 6.13
4620 4967 1.006832 CGGTGAAATAGACTTGGCCG 58.993 55.000 0.00 0.00 0.00 6.13
4621 4968 2.007608 GTCGGTGAAATAGACTTGGCC 58.992 52.381 0.00 0.00 32.58 5.36
4622 4969 2.673368 CTGTCGGTGAAATAGACTTGGC 59.327 50.000 0.00 0.00 36.01 4.52
4623 4970 2.673368 GCTGTCGGTGAAATAGACTTGG 59.327 50.000 0.00 0.00 36.01 3.61
4624 4971 3.589988 AGCTGTCGGTGAAATAGACTTG 58.410 45.455 0.00 0.00 36.01 3.16
4625 4972 3.673594 CGAGCTGTCGGTGAAATAGACTT 60.674 47.826 0.00 0.00 42.87 3.01
4626 4973 2.159366 CGAGCTGTCGGTGAAATAGACT 60.159 50.000 0.00 0.00 42.87 3.24
4627 4974 2.159421 TCGAGCTGTCGGTGAAATAGAC 60.159 50.000 0.00 0.00 46.80 2.59
4628 4975 2.089201 TCGAGCTGTCGGTGAAATAGA 58.911 47.619 0.00 0.00 46.80 1.98
4629 4976 2.561733 TCGAGCTGTCGGTGAAATAG 57.438 50.000 0.00 0.00 46.80 1.73
4636 4983 2.182791 CTGCATCGAGCTGTCGGT 59.817 61.111 0.00 0.00 46.80 4.69
4641 4988 2.191802 CTCTTGTACTGCATCGAGCTG 58.808 52.381 0.00 10.57 45.94 4.24
4642 4989 1.135915 CCTCTTGTACTGCATCGAGCT 59.864 52.381 8.07 0.00 45.94 4.09
4643 4990 1.134965 ACCTCTTGTACTGCATCGAGC 60.135 52.381 0.00 0.00 45.96 5.03
4644 4991 2.792890 CGACCTCTTGTACTGCATCGAG 60.793 54.545 0.00 0.00 29.07 4.04
4645 4992 1.132453 CGACCTCTTGTACTGCATCGA 59.868 52.381 0.00 0.00 29.07 3.59
4646 4993 1.550065 CGACCTCTTGTACTGCATCG 58.450 55.000 0.00 0.00 0.00 3.84
4647 4994 1.281899 GCGACCTCTTGTACTGCATC 58.718 55.000 0.00 0.00 0.00 3.91
4648 4995 0.608130 TGCGACCTCTTGTACTGCAT 59.392 50.000 0.00 0.00 0.00 3.96
4649 4996 0.038251 CTGCGACCTCTTGTACTGCA 60.038 55.000 0.00 0.00 0.00 4.41
4650 4997 1.355066 GCTGCGACCTCTTGTACTGC 61.355 60.000 0.00 0.00 0.00 4.40
4651 4998 0.038251 TGCTGCGACCTCTTGTACTG 60.038 55.000 0.00 0.00 0.00 2.74
4652 4999 0.898320 ATGCTGCGACCTCTTGTACT 59.102 50.000 0.00 0.00 0.00 2.73
4653 5000 1.002366 CATGCTGCGACCTCTTGTAC 58.998 55.000 0.00 0.00 0.00 2.90
4654 5001 0.894835 TCATGCTGCGACCTCTTGTA 59.105 50.000 0.00 0.00 0.00 2.41
4655 5002 0.390866 CTCATGCTGCGACCTCTTGT 60.391 55.000 0.00 0.00 0.00 3.16
4656 5003 0.108472 TCTCATGCTGCGACCTCTTG 60.108 55.000 0.00 0.00 0.00 3.02
4657 5004 0.829333 ATCTCATGCTGCGACCTCTT 59.171 50.000 0.00 0.00 0.00 2.85
4658 5005 0.104487 CATCTCATGCTGCGACCTCT 59.896 55.000 0.00 0.00 0.00 3.69
4659 5006 0.879400 CCATCTCATGCTGCGACCTC 60.879 60.000 0.00 0.00 0.00 3.85
4660 5007 1.145598 CCATCTCATGCTGCGACCT 59.854 57.895 0.00 0.00 0.00 3.85
4661 5008 1.153289 ACCATCTCATGCTGCGACC 60.153 57.895 0.00 0.00 0.00 4.79
4662 5009 0.460811 TGACCATCTCATGCTGCGAC 60.461 55.000 0.00 0.00 0.00 5.19
4663 5010 0.460811 GTGACCATCTCATGCTGCGA 60.461 55.000 0.00 0.00 0.00 5.10
4664 5011 1.434622 GGTGACCATCTCATGCTGCG 61.435 60.000 0.00 0.00 0.00 5.18
4665 5012 0.393402 TGGTGACCATCTCATGCTGC 60.393 55.000 0.00 0.00 0.00 5.25
4666 5013 1.065636 AGTGGTGACCATCTCATGCTG 60.066 52.381 7.94 0.00 35.28 4.41
4667 5014 1.209019 GAGTGGTGACCATCTCATGCT 59.791 52.381 21.38 8.44 35.28 3.79
4668 5015 1.065926 TGAGTGGTGACCATCTCATGC 60.066 52.381 23.63 5.61 37.04 4.06
4669 5016 2.625737 GTGAGTGGTGACCATCTCATG 58.374 52.381 27.35 0.00 40.66 3.07
4670 5017 1.556911 GGTGAGTGGTGACCATCTCAT 59.443 52.381 27.35 7.74 40.66 2.90
4671 5018 0.976641 GGTGAGTGGTGACCATCTCA 59.023 55.000 23.63 23.63 38.40 3.27
4672 5019 0.976641 TGGTGAGTGGTGACCATCTC 59.023 55.000 20.23 20.23 37.32 2.75
4673 5020 1.349026 CTTGGTGAGTGGTGACCATCT 59.651 52.381 7.94 7.03 41.92 2.90
4674 5021 1.347707 TCTTGGTGAGTGGTGACCATC 59.652 52.381 7.94 7.33 41.92 3.51
4675 5022 1.072331 GTCTTGGTGAGTGGTGACCAT 59.928 52.381 7.94 0.00 41.92 3.55
4676 5023 0.468226 GTCTTGGTGAGTGGTGACCA 59.532 55.000 0.00 0.00 40.61 4.02
4677 5024 0.468226 TGTCTTGGTGAGTGGTGACC 59.532 55.000 0.00 0.00 0.00 4.02
4678 5025 1.541233 CCTGTCTTGGTGAGTGGTGAC 60.541 57.143 0.00 0.00 0.00 3.67
4679 5026 0.758734 CCTGTCTTGGTGAGTGGTGA 59.241 55.000 0.00 0.00 0.00 4.02
4680 5027 0.250467 CCCTGTCTTGGTGAGTGGTG 60.250 60.000 0.00 0.00 0.00 4.17
4681 5028 1.418908 CCCCTGTCTTGGTGAGTGGT 61.419 60.000 0.00 0.00 0.00 4.16
4682 5029 1.127567 TCCCCTGTCTTGGTGAGTGG 61.128 60.000 0.00 0.00 0.00 4.00
4683 5030 0.987294 ATCCCCTGTCTTGGTGAGTG 59.013 55.000 0.00 0.00 0.00 3.51
4684 5031 1.630878 GAATCCCCTGTCTTGGTGAGT 59.369 52.381 0.00 0.00 0.00 3.41
4685 5032 1.406069 CGAATCCCCTGTCTTGGTGAG 60.406 57.143 0.00 0.00 0.00 3.51
4686 5033 0.613260 CGAATCCCCTGTCTTGGTGA 59.387 55.000 0.00 0.00 0.00 4.02
4687 5034 0.613260 TCGAATCCCCTGTCTTGGTG 59.387 55.000 0.00 0.00 0.00 4.17
4688 5035 0.613777 GTCGAATCCCCTGTCTTGGT 59.386 55.000 0.00 0.00 0.00 3.67
4689 5036 0.460284 CGTCGAATCCCCTGTCTTGG 60.460 60.000 0.00 0.00 0.00 3.61
4690 5037 0.460284 CCGTCGAATCCCCTGTCTTG 60.460 60.000 0.00 0.00 0.00 3.02
4691 5038 1.614241 CCCGTCGAATCCCCTGTCTT 61.614 60.000 0.00 0.00 0.00 3.01
4692 5039 2.058595 CCCGTCGAATCCCCTGTCT 61.059 63.158 0.00 0.00 0.00 3.41
4693 5040 2.499685 CCCGTCGAATCCCCTGTC 59.500 66.667 0.00 0.00 0.00 3.51
4694 5041 3.782443 GCCCGTCGAATCCCCTGT 61.782 66.667 0.00 0.00 0.00 4.00
4695 5042 4.547367 GGCCCGTCGAATCCCCTG 62.547 72.222 0.00 0.00 0.00 4.45
4705 5052 4.241555 ATCATGAGGCGGCCCGTC 62.242 66.667 17.02 0.00 35.76 4.79
4706 5053 4.552365 CATCATGAGGCGGCCCGT 62.552 66.667 17.02 5.87 35.76 5.28
4707 5054 3.163832 TACATCATGAGGCGGCCCG 62.164 63.158 17.02 0.00 35.76 6.13
4708 5055 1.598130 GTACATCATGAGGCGGCCC 60.598 63.158 17.02 8.02 0.00 5.80
4709 5056 1.956170 CGTACATCATGAGGCGGCC 60.956 63.158 12.11 12.11 0.00 6.13
4710 5057 1.067416 TCGTACATCATGAGGCGGC 59.933 57.895 7.40 0.00 0.00 6.53
4711 5058 0.597637 GGTCGTACATCATGAGGCGG 60.598 60.000 7.40 0.00 0.00 6.13
4712 5059 0.597637 GGGTCGTACATCATGAGGCG 60.598 60.000 7.40 4.12 0.00 5.52
4713 5060 0.464036 TGGGTCGTACATCATGAGGC 59.536 55.000 7.40 0.00 0.00 4.70


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.