Multiple sequence alignment - TraesCS5B01G330200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G330200 chr5B 100.000 4084 0 0 1 4084 514287201 514291284 0.000000e+00 7542.0
1 TraesCS5B01G330200 chr5B 86.913 596 40 10 1052 1643 415393472 415394033 5.760000e-178 634.0
2 TraesCS5B01G330200 chr5B 97.357 227 6 0 141 367 440539152 440538926 1.780000e-103 387.0
3 TraesCS5B01G330200 chr5D 90.694 3342 144 57 368 3629 425085538 425088792 0.000000e+00 4294.0
4 TraesCS5B01G330200 chr5D 91.589 214 13 3 3871 4084 425088896 425089104 1.440000e-74 291.0
5 TraesCS5B01G330200 chr5D 100.000 34 0 0 3662 3695 425088809 425088842 3.410000e-06 63.9
6 TraesCS5B01G330200 chr5D 100.000 29 0 0 3670 3698 425087954 425087982 2.000000e-03 54.7
7 TraesCS5B01G330200 chr5A 90.898 3274 121 49 379 3583 539101053 539104218 0.000000e+00 4231.0
8 TraesCS5B01G330200 chr5A 91.642 335 19 6 3752 4084 539104606 539104933 4.810000e-124 455.0
9 TraesCS5B01G330200 chr5A 100.000 29 0 0 3670 3698 539103418 539103446 2.000000e-03 54.7
10 TraesCS5B01G330200 chr7A 89.316 599 37 8 1049 1643 617958015 617958590 0.000000e+00 726.0
11 TraesCS5B01G330200 chr3B 89.262 596 38 8 1052 1643 782859207 782859780 0.000000e+00 723.0
12 TraesCS5B01G330200 chr3B 97.345 226 6 0 142 367 32742192 32742417 6.400000e-103 385.0
13 TraesCS5B01G330200 chr2A 90.249 523 23 6 1125 1643 3343499 3343001 0.000000e+00 658.0
14 TraesCS5B01G330200 chr3A 97.788 226 5 0 142 367 614688613 614688388 1.380000e-104 390.0
15 TraesCS5B01G330200 chr7B 97.357 227 6 0 141 367 480854573 480854347 1.780000e-103 387.0
16 TraesCS5B01G330200 chr4B 96.916 227 7 0 141 367 580796982 580797208 8.280000e-102 381.0
17 TraesCS5B01G330200 chr4B 96.930 228 5 2 141 367 673241797 673241571 8.280000e-102 381.0
18 TraesCS5B01G330200 chr4B 90.244 41 4 0 664 704 22266600 22266640 2.000000e-03 54.7
19 TraesCS5B01G330200 chr1B 96.137 233 8 1 136 367 645300821 645300589 2.980000e-101 379.0
20 TraesCS5B01G330200 chr1B 100.000 31 0 0 1613 1643 627842917 627842947 1.590000e-04 58.4
21 TraesCS5B01G330200 chrUn 96.889 225 7 0 143 367 272192256 272192480 1.070000e-100 377.0
22 TraesCS5B01G330200 chrUn 96.889 225 7 0 143 367 281137416 281137640 1.070000e-100 377.0
23 TraesCS5B01G330200 chr6B 78.169 142 19 6 3877 4006 204111650 204111791 3.380000e-11 80.5
24 TraesCS5B01G330200 chr6B 86.765 68 9 0 4010 4077 204111831 204111898 4.380000e-10 76.8
25 TraesCS5B01G330200 chr7D 88.333 60 7 0 3862 3921 30761811 30761870 5.660000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G330200 chr5B 514287201 514291284 4083 False 7542.000000 7542 100.00000 1 4084 1 chr5B.!!$F2 4083
1 TraesCS5B01G330200 chr5B 415393472 415394033 561 False 634.000000 634 86.91300 1052 1643 1 chr5B.!!$F1 591
2 TraesCS5B01G330200 chr5D 425085538 425089104 3566 False 1175.900000 4294 95.57075 368 4084 4 chr5D.!!$F1 3716
3 TraesCS5B01G330200 chr5A 539101053 539104933 3880 False 1580.233333 4231 94.18000 379 4084 3 chr5A.!!$F1 3705
4 TraesCS5B01G330200 chr7A 617958015 617958590 575 False 726.000000 726 89.31600 1049 1643 1 chr7A.!!$F1 594
5 TraesCS5B01G330200 chr3B 782859207 782859780 573 False 723.000000 723 89.26200 1052 1643 1 chr3B.!!$F2 591

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
377 378 0.034337 GAGGAAGGCGTGTGTAACCA 59.966 55.0 0.00 0.0 34.36 3.67 F
798 817 0.457851 AGGCGGTCTCAGATTCGAAG 59.542 55.0 3.35 0.0 0.00 3.79 F
1923 1993 0.173708 CACCAGGCTCCTCGTAAGTC 59.826 60.0 0.00 0.0 39.48 3.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1272 1314 1.444553 GAAGGAGTCGGAGTGCGTG 60.445 63.158 3.3 0.0 0.0 5.34 R
2771 2867 0.615827 TGCTGCTCTGCTCCTCCTTA 60.616 55.000 0.0 0.0 0.0 2.69 R
3745 4109 0.742505 ATGATGCAGTTGAATGGCCG 59.257 50.000 0.0 0.0 0.0 6.13 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.212275 TCCGAATCCGAATCCGCA 58.788 55.556 0.00 0.00 38.22 5.69
18 19 1.227147 TCCGAATCCGAATCCGCAC 60.227 57.895 0.00 0.00 38.22 5.34
19 20 2.585869 CCGAATCCGAATCCGCACG 61.586 63.158 0.00 0.00 38.22 5.34
20 21 2.626455 GAATCCGAATCCGCACGC 59.374 61.111 0.00 0.00 0.00 5.34
21 22 3.210419 GAATCCGAATCCGCACGCG 62.210 63.158 3.53 3.53 39.44 6.01
22 23 4.508128 ATCCGAATCCGCACGCGT 62.508 61.111 5.58 5.58 37.81 6.01
23 24 4.728102 TCCGAATCCGCACGCGTT 62.728 61.111 10.22 0.00 37.81 4.84
24 25 2.616786 ATCCGAATCCGCACGCGTTA 62.617 55.000 10.22 0.00 37.81 3.18
25 26 2.235016 CCGAATCCGCACGCGTTAT 61.235 57.895 10.22 0.00 37.81 1.89
26 27 1.634225 CGAATCCGCACGCGTTATT 59.366 52.632 10.22 7.34 37.81 1.40
27 28 0.381428 CGAATCCGCACGCGTTATTC 60.381 55.000 10.22 15.10 36.97 1.75
28 29 0.042448 GAATCCGCACGCGTTATTCC 60.042 55.000 10.22 0.00 35.64 3.01
29 30 1.758319 AATCCGCACGCGTTATTCCG 61.758 55.000 10.22 7.53 37.81 4.30
30 31 2.616786 ATCCGCACGCGTTATTCCGA 62.617 55.000 10.22 0.00 37.81 4.55
31 32 2.235016 CCGCACGCGTTATTCCGAT 61.235 57.895 10.22 0.00 37.81 4.18
32 33 1.634225 CGCACGCGTTATTCCGATT 59.366 52.632 10.22 0.00 34.35 3.34
33 34 0.381428 CGCACGCGTTATTCCGATTC 60.381 55.000 10.22 0.00 34.35 2.52
34 35 0.381428 GCACGCGTTATTCCGATTCG 60.381 55.000 10.22 0.00 0.00 3.34
45 46 2.202932 CGATTCGGAGGCACCCTG 60.203 66.667 0.00 0.00 31.76 4.45
46 47 2.514824 GATTCGGAGGCACCCTGC 60.515 66.667 0.00 0.00 44.08 4.85
55 56 3.458653 GCACCCTGCAACCAACAT 58.541 55.556 0.00 0.00 44.26 2.71
56 57 2.652313 GCACCCTGCAACCAACATA 58.348 52.632 0.00 0.00 44.26 2.29
57 58 0.965439 GCACCCTGCAACCAACATAA 59.035 50.000 0.00 0.00 44.26 1.90
58 59 1.336795 GCACCCTGCAACCAACATAAC 60.337 52.381 0.00 0.00 44.26 1.89
59 60 2.238521 CACCCTGCAACCAACATAACT 58.761 47.619 0.00 0.00 0.00 2.24
60 61 2.030007 CACCCTGCAACCAACATAACTG 60.030 50.000 0.00 0.00 0.00 3.16
61 62 2.158534 ACCCTGCAACCAACATAACTGA 60.159 45.455 0.00 0.00 0.00 3.41
62 63 2.890311 CCCTGCAACCAACATAACTGAA 59.110 45.455 0.00 0.00 0.00 3.02
63 64 3.057315 CCCTGCAACCAACATAACTGAAG 60.057 47.826 0.00 0.00 0.00 3.02
64 65 3.820467 CCTGCAACCAACATAACTGAAGA 59.180 43.478 0.00 0.00 0.00 2.87
65 66 4.460382 CCTGCAACCAACATAACTGAAGAT 59.540 41.667 0.00 0.00 0.00 2.40
66 67 5.047802 CCTGCAACCAACATAACTGAAGATT 60.048 40.000 0.00 0.00 0.00 2.40
67 68 6.150976 CCTGCAACCAACATAACTGAAGATTA 59.849 38.462 0.00 0.00 0.00 1.75
68 69 7.309133 CCTGCAACCAACATAACTGAAGATTAA 60.309 37.037 0.00 0.00 0.00 1.40
69 70 7.592938 TGCAACCAACATAACTGAAGATTAAG 58.407 34.615 0.00 0.00 0.00 1.85
70 71 7.230510 TGCAACCAACATAACTGAAGATTAAGT 59.769 33.333 0.00 0.00 0.00 2.24
71 72 8.726988 GCAACCAACATAACTGAAGATTAAGTA 58.273 33.333 0.00 0.00 0.00 2.24
73 74 8.475331 ACCAACATAACTGAAGATTAAGTACG 57.525 34.615 0.00 0.00 0.00 3.67
74 75 7.064253 ACCAACATAACTGAAGATTAAGTACGC 59.936 37.037 0.00 0.00 0.00 4.42
75 76 7.399523 CAACATAACTGAAGATTAAGTACGCC 58.600 38.462 0.00 0.00 0.00 5.68
76 77 6.875076 ACATAACTGAAGATTAAGTACGCCT 58.125 36.000 0.00 0.00 0.00 5.52
77 78 6.757010 ACATAACTGAAGATTAAGTACGCCTG 59.243 38.462 0.00 0.00 0.00 4.85
78 79 5.401531 AACTGAAGATTAAGTACGCCTGA 57.598 39.130 0.00 0.00 0.00 3.86
79 80 4.745649 ACTGAAGATTAAGTACGCCTGAC 58.254 43.478 0.00 0.00 0.00 3.51
80 81 4.219944 ACTGAAGATTAAGTACGCCTGACA 59.780 41.667 0.00 0.00 0.00 3.58
81 82 4.491676 TGAAGATTAAGTACGCCTGACAC 58.508 43.478 0.00 0.00 0.00 3.67
82 83 4.219944 TGAAGATTAAGTACGCCTGACACT 59.780 41.667 0.00 0.00 0.00 3.55
83 84 4.373348 AGATTAAGTACGCCTGACACTC 57.627 45.455 0.00 0.00 0.00 3.51
84 85 2.624316 TTAAGTACGCCTGACACTCG 57.376 50.000 0.00 0.00 0.00 4.18
85 86 1.527034 TAAGTACGCCTGACACTCGT 58.473 50.000 3.23 3.23 39.88 4.18
86 87 0.039437 AAGTACGCCTGACACTCGTG 60.039 55.000 7.31 0.00 37.61 4.35
87 88 2.087009 GTACGCCTGACACTCGTGC 61.087 63.158 7.31 3.14 37.61 5.34
88 89 2.265904 TACGCCTGACACTCGTGCT 61.266 57.895 7.31 0.00 37.61 4.40
89 90 2.196382 TACGCCTGACACTCGTGCTC 62.196 60.000 7.31 0.00 37.61 4.26
90 91 2.340078 GCCTGACACTCGTGCTCA 59.660 61.111 0.00 0.53 0.00 4.26
91 92 1.079543 GCCTGACACTCGTGCTCAT 60.080 57.895 0.00 0.00 0.00 2.90
92 93 1.080995 GCCTGACACTCGTGCTCATC 61.081 60.000 0.00 0.00 0.00 2.92
93 94 0.799917 CCTGACACTCGTGCTCATCG 60.800 60.000 0.00 0.00 0.00 3.84
94 95 1.409227 CTGACACTCGTGCTCATCGC 61.409 60.000 0.00 0.00 39.77 4.58
95 96 2.125912 ACACTCGTGCTCATCGCC 60.126 61.111 0.00 0.00 38.05 5.54
96 97 3.250323 CACTCGTGCTCATCGCCG 61.250 66.667 0.00 0.00 38.05 6.46
99 100 4.512961 TCGTGCTCATCGCCGCAT 62.513 61.111 0.00 0.00 38.56 4.73
100 101 3.993234 CGTGCTCATCGCCGCATC 61.993 66.667 0.00 0.00 38.56 3.91
101 102 2.891936 GTGCTCATCGCCGCATCA 60.892 61.111 0.00 0.00 38.56 3.07
102 103 2.586914 TGCTCATCGCCGCATCAG 60.587 61.111 0.00 0.00 38.05 2.90
103 104 4.010414 GCTCATCGCCGCATCAGC 62.010 66.667 0.00 0.00 37.42 4.26
104 105 2.279985 CTCATCGCCGCATCAGCT 60.280 61.111 0.00 0.00 39.10 4.24
105 106 2.279717 TCATCGCCGCATCAGCTC 60.280 61.111 0.00 0.00 39.10 4.09
106 107 2.586914 CATCGCCGCATCAGCTCA 60.587 61.111 0.00 0.00 39.10 4.26
107 108 2.279985 ATCGCCGCATCAGCTCAG 60.280 61.111 0.00 0.00 39.10 3.35
111 112 4.172512 CCGCATCAGCTCAGCCCT 62.173 66.667 0.00 0.00 39.10 5.19
112 113 2.588314 CGCATCAGCTCAGCCCTC 60.588 66.667 0.00 0.00 39.10 4.30
113 114 2.203181 GCATCAGCTCAGCCCTCC 60.203 66.667 0.00 0.00 37.91 4.30
114 115 2.744243 GCATCAGCTCAGCCCTCCT 61.744 63.158 0.00 0.00 37.91 3.69
115 116 1.446791 CATCAGCTCAGCCCTCCTC 59.553 63.158 0.00 0.00 0.00 3.71
116 117 1.002662 ATCAGCTCAGCCCTCCTCA 59.997 57.895 0.00 0.00 0.00 3.86
117 118 1.336632 ATCAGCTCAGCCCTCCTCAC 61.337 60.000 0.00 0.00 0.00 3.51
118 119 2.121385 AGCTCAGCCCTCCTCACA 59.879 61.111 0.00 0.00 0.00 3.58
119 120 1.988956 AGCTCAGCCCTCCTCACAG 60.989 63.158 0.00 0.00 0.00 3.66
120 121 2.289532 GCTCAGCCCTCCTCACAGT 61.290 63.158 0.00 0.00 0.00 3.55
121 122 1.835927 GCTCAGCCCTCCTCACAGTT 61.836 60.000 0.00 0.00 0.00 3.16
122 123 0.036577 CTCAGCCCTCCTCACAGTTG 60.037 60.000 0.00 0.00 0.00 3.16
123 124 0.764369 TCAGCCCTCCTCACAGTTGT 60.764 55.000 0.00 0.00 0.00 3.32
124 125 0.604780 CAGCCCTCCTCACAGTTGTG 60.605 60.000 5.91 5.91 46.91 3.33
125 126 1.056700 AGCCCTCCTCACAGTTGTGT 61.057 55.000 11.66 0.00 45.76 3.72
135 136 1.011333 ACAGTTGTGTGCGTGTAACC 58.989 50.000 0.00 0.00 34.75 2.85
136 137 1.010580 CAGTTGTGTGCGTGTAACCA 58.989 50.000 0.00 0.00 0.00 3.67
137 138 1.398739 CAGTTGTGTGCGTGTAACCAA 59.601 47.619 0.00 0.00 0.00 3.67
138 139 2.085320 AGTTGTGTGCGTGTAACCAAA 58.915 42.857 0.00 0.00 0.00 3.28
139 140 2.159490 AGTTGTGTGCGTGTAACCAAAC 60.159 45.455 0.00 0.00 0.00 2.93
140 141 1.740297 TGTGTGCGTGTAACCAAACT 58.260 45.000 0.00 0.00 29.86 2.66
141 142 2.085320 TGTGTGCGTGTAACCAAACTT 58.915 42.857 0.00 0.00 29.86 2.66
142 143 2.488545 TGTGTGCGTGTAACCAAACTTT 59.511 40.909 0.00 0.00 29.86 2.66
143 144 3.057456 TGTGTGCGTGTAACCAAACTTTT 60.057 39.130 0.00 0.00 29.86 2.27
144 145 3.921630 GTGTGCGTGTAACCAAACTTTTT 59.078 39.130 0.00 0.00 0.00 1.94
166 167 4.470334 TTTTGAAACAGAGGCAAAAGCT 57.530 36.364 0.00 0.00 36.80 3.74
167 168 4.470334 TTTGAAACAGAGGCAAAAGCTT 57.530 36.364 0.00 0.00 0.00 3.74
168 169 4.470334 TTGAAACAGAGGCAAAAGCTTT 57.530 36.364 5.69 5.69 0.00 3.51
169 170 3.784338 TGAAACAGAGGCAAAAGCTTTG 58.216 40.909 13.54 8.26 0.00 2.77
170 171 2.229675 AACAGAGGCAAAAGCTTTGC 57.770 45.000 13.54 17.13 44.22 3.68
179 180 4.556942 GCAAAAGCTTTGCCTTTTTCAT 57.443 36.364 13.54 0.00 41.67 2.57
180 181 4.923893 GCAAAAGCTTTGCCTTTTTCATT 58.076 34.783 13.54 0.00 41.67 2.57
181 182 6.058827 GCAAAAGCTTTGCCTTTTTCATTA 57.941 33.333 13.54 0.00 41.67 1.90
182 183 6.493978 GCAAAAGCTTTGCCTTTTTCATTAA 58.506 32.000 13.54 0.00 41.67 1.40
183 184 7.140705 GCAAAAGCTTTGCCTTTTTCATTAAT 58.859 30.769 13.54 0.00 41.67 1.40
184 185 8.288913 GCAAAAGCTTTGCCTTTTTCATTAATA 58.711 29.630 13.54 0.00 41.67 0.98
185 186 9.815936 CAAAAGCTTTGCCTTTTTCATTAATAG 57.184 29.630 13.54 0.00 41.67 1.73
186 187 9.777297 AAAAGCTTTGCCTTTTTCATTAATAGA 57.223 25.926 13.54 0.00 40.99 1.98
187 188 8.992835 AAGCTTTGCCTTTTTCATTAATAGAG 57.007 30.769 0.00 0.00 0.00 2.43
188 189 8.353423 AGCTTTGCCTTTTTCATTAATAGAGA 57.647 30.769 0.00 0.00 0.00 3.10
189 190 8.806146 AGCTTTGCCTTTTTCATTAATAGAGAA 58.194 29.630 0.00 0.00 0.00 2.87
190 191 9.080915 GCTTTGCCTTTTTCATTAATAGAGAAG 57.919 33.333 0.00 0.00 0.00 2.85
191 192 9.578439 CTTTGCCTTTTTCATTAATAGAGAAGG 57.422 33.333 12.00 12.00 35.22 3.46
192 193 8.877864 TTGCCTTTTTCATTAATAGAGAAGGA 57.122 30.769 17.15 6.05 34.60 3.36
193 194 8.511604 TGCCTTTTTCATTAATAGAGAAGGAG 57.488 34.615 17.15 7.30 34.60 3.69
194 195 8.328758 TGCCTTTTTCATTAATAGAGAAGGAGA 58.671 33.333 17.15 6.04 34.60 3.71
195 196 9.348476 GCCTTTTTCATTAATAGAGAAGGAGAT 57.652 33.333 17.15 0.00 34.60 2.75
203 204 9.936759 CATTAATAGAGAAGGAGATAGTTTCCC 57.063 37.037 0.00 0.00 35.20 3.97
204 205 6.658188 AATAGAGAAGGAGATAGTTTCCCG 57.342 41.667 0.00 0.00 35.20 5.14
205 206 3.301274 AGAGAAGGAGATAGTTTCCCGG 58.699 50.000 0.00 0.00 35.20 5.73
206 207 3.032459 GAGAAGGAGATAGTTTCCCGGT 58.968 50.000 0.00 0.00 35.20 5.28
207 208 3.451540 GAGAAGGAGATAGTTTCCCGGTT 59.548 47.826 0.00 0.00 35.20 4.44
208 209 4.617593 AGAAGGAGATAGTTTCCCGGTTA 58.382 43.478 0.00 0.00 35.20 2.85
209 210 5.028131 AGAAGGAGATAGTTTCCCGGTTAA 58.972 41.667 0.00 0.00 35.20 2.01
210 211 5.666265 AGAAGGAGATAGTTTCCCGGTTAAT 59.334 40.000 0.00 0.00 35.20 1.40
211 212 5.970501 AGGAGATAGTTTCCCGGTTAATT 57.029 39.130 0.00 0.00 35.20 1.40
212 213 7.346436 AGAAGGAGATAGTTTCCCGGTTAATTA 59.654 37.037 0.00 0.00 35.20 1.40
213 214 7.441903 AGGAGATAGTTTCCCGGTTAATTAA 57.558 36.000 0.00 0.00 35.20 1.40
214 215 7.864770 AGGAGATAGTTTCCCGGTTAATTAAA 58.135 34.615 0.00 0.00 35.20 1.52
215 216 7.991460 AGGAGATAGTTTCCCGGTTAATTAAAG 59.009 37.037 0.00 0.00 35.20 1.85
216 217 7.228108 GGAGATAGTTTCCCGGTTAATTAAAGG 59.772 40.741 0.00 11.92 0.00 3.11
217 218 7.864770 AGATAGTTTCCCGGTTAATTAAAGGA 58.135 34.615 17.80 13.12 0.00 3.36
218 219 8.330993 AGATAGTTTCCCGGTTAATTAAAGGAA 58.669 33.333 17.80 16.98 0.00 3.36
219 220 8.882557 ATAGTTTCCCGGTTAATTAAAGGAAA 57.117 30.769 22.45 22.45 40.20 3.13
220 221 7.600231 AGTTTCCCGGTTAATTAAAGGAAAA 57.400 32.000 25.30 15.61 43.08 2.29
221 222 7.436118 AGTTTCCCGGTTAATTAAAGGAAAAC 58.564 34.615 25.30 22.39 43.08 2.43
222 223 5.981088 TCCCGGTTAATTAAAGGAAAACC 57.019 39.130 17.80 7.91 36.95 3.27
227 228 4.618067 GGTTAATTAAAGGAAAACCGTGCG 59.382 41.667 0.00 0.00 31.09 5.34
228 229 5.451039 GTTAATTAAAGGAAAACCGTGCGA 58.549 37.500 0.00 0.00 0.00 5.10
229 230 4.571372 AATTAAAGGAAAACCGTGCGAA 57.429 36.364 0.00 0.00 0.00 4.70
230 231 4.571372 ATTAAAGGAAAACCGTGCGAAA 57.429 36.364 0.00 0.00 0.00 3.46
231 232 2.943449 AAAGGAAAACCGTGCGAAAA 57.057 40.000 0.00 0.00 0.00 2.29
232 233 2.197792 AAGGAAAACCGTGCGAAAAC 57.802 45.000 0.00 0.00 0.00 2.43
233 234 0.382873 AGGAAAACCGTGCGAAAACC 59.617 50.000 0.00 0.00 0.00 3.27
234 235 0.931202 GGAAAACCGTGCGAAAACCG 60.931 55.000 0.00 0.00 42.21 4.44
235 236 0.931202 GAAAACCGTGCGAAAACCGG 60.931 55.000 0.00 0.00 46.93 5.28
238 239 2.855325 CCGTGCGAAAACCGGTAC 59.145 61.111 8.00 0.00 39.04 3.34
239 240 1.955157 CCGTGCGAAAACCGGTACA 60.955 57.895 8.00 0.00 39.04 2.90
240 241 1.293267 CCGTGCGAAAACCGGTACAT 61.293 55.000 8.00 0.00 39.04 2.29
241 242 0.094046 CGTGCGAAAACCGGTACATC 59.906 55.000 8.00 5.77 39.04 3.06
242 243 1.149987 GTGCGAAAACCGGTACATCA 58.850 50.000 8.00 0.00 39.04 3.07
243 244 1.532007 GTGCGAAAACCGGTACATCAA 59.468 47.619 8.00 0.00 39.04 2.57
244 245 1.801771 TGCGAAAACCGGTACATCAAG 59.198 47.619 8.00 0.00 39.04 3.02
245 246 1.129811 GCGAAAACCGGTACATCAAGG 59.870 52.381 8.00 0.00 39.04 3.61
246 247 1.735571 CGAAAACCGGTACATCAAGGG 59.264 52.381 8.00 0.00 33.91 3.95
247 248 2.786777 GAAAACCGGTACATCAAGGGT 58.213 47.619 8.00 0.00 0.00 4.34
248 249 2.484742 AAACCGGTACATCAAGGGTC 57.515 50.000 8.00 0.00 0.00 4.46
249 250 1.354101 AACCGGTACATCAAGGGTCA 58.646 50.000 8.00 0.00 0.00 4.02
250 251 1.354101 ACCGGTACATCAAGGGTCAA 58.646 50.000 4.49 0.00 0.00 3.18
251 252 1.700739 ACCGGTACATCAAGGGTCAAA 59.299 47.619 4.49 0.00 0.00 2.69
252 253 2.081462 CCGGTACATCAAGGGTCAAAC 58.919 52.381 0.00 0.00 0.00 2.93
253 254 2.081462 CGGTACATCAAGGGTCAAACC 58.919 52.381 0.00 0.00 37.60 3.27
263 264 3.487576 GGTCAAACCCACACACAGA 57.512 52.632 0.00 0.00 30.04 3.41
264 265 1.021968 GGTCAAACCCACACACAGAC 58.978 55.000 0.00 0.00 30.04 3.51
265 266 1.021968 GTCAAACCCACACACAGACC 58.978 55.000 0.00 0.00 0.00 3.85
266 267 0.106918 TCAAACCCACACACAGACCC 60.107 55.000 0.00 0.00 0.00 4.46
267 268 1.153046 AAACCCACACACAGACCCG 60.153 57.895 0.00 0.00 0.00 5.28
268 269 1.628238 AAACCCACACACAGACCCGA 61.628 55.000 0.00 0.00 0.00 5.14
269 270 2.030562 CCCACACACAGACCCGAC 59.969 66.667 0.00 0.00 0.00 4.79
270 271 2.802724 CCCACACACAGACCCGACA 61.803 63.158 0.00 0.00 0.00 4.35
271 272 1.145156 CCACACACAGACCCGACAA 59.855 57.895 0.00 0.00 0.00 3.18
272 273 0.880278 CCACACACAGACCCGACAAG 60.880 60.000 0.00 0.00 0.00 3.16
273 274 1.227556 ACACACAGACCCGACAAGC 60.228 57.895 0.00 0.00 0.00 4.01
274 275 1.961277 CACACAGACCCGACAAGCC 60.961 63.158 0.00 0.00 0.00 4.35
275 276 2.425592 CACAGACCCGACAAGCCA 59.574 61.111 0.00 0.00 0.00 4.75
276 277 1.227823 CACAGACCCGACAAGCCAA 60.228 57.895 0.00 0.00 0.00 4.52
277 278 1.227853 ACAGACCCGACAAGCCAAC 60.228 57.895 0.00 0.00 0.00 3.77
278 279 1.227823 CAGACCCGACAAGCCAACA 60.228 57.895 0.00 0.00 0.00 3.33
279 280 0.817634 CAGACCCGACAAGCCAACAA 60.818 55.000 0.00 0.00 0.00 2.83
280 281 0.535102 AGACCCGACAAGCCAACAAG 60.535 55.000 0.00 0.00 0.00 3.16
281 282 1.515521 GACCCGACAAGCCAACAAGG 61.516 60.000 0.00 0.00 41.84 3.61
282 283 1.228124 CCCGACAAGCCAACAAGGA 60.228 57.895 0.00 0.00 41.22 3.36
283 284 1.515521 CCCGACAAGCCAACAAGGAC 61.516 60.000 0.00 0.00 41.22 3.85
284 285 1.515521 CCGACAAGCCAACAAGGACC 61.516 60.000 0.00 0.00 41.22 4.46
285 286 1.515521 CGACAAGCCAACAAGGACCC 61.516 60.000 0.00 0.00 41.22 4.46
286 287 1.152546 ACAAGCCAACAAGGACCCC 60.153 57.895 0.00 0.00 41.22 4.95
287 288 2.115266 AAGCCAACAAGGACCCCG 59.885 61.111 0.00 0.00 41.22 5.73
288 289 4.660938 AGCCAACAAGGACCCCGC 62.661 66.667 0.00 0.00 41.22 6.13
289 290 4.966787 GCCAACAAGGACCCCGCA 62.967 66.667 0.00 0.00 41.22 5.69
290 291 2.672996 CCAACAAGGACCCCGCAG 60.673 66.667 0.00 0.00 41.22 5.18
291 292 2.429930 CAACAAGGACCCCGCAGA 59.570 61.111 0.00 0.00 0.00 4.26
292 293 1.002134 CAACAAGGACCCCGCAGAT 60.002 57.895 0.00 0.00 0.00 2.90
293 294 1.002134 AACAAGGACCCCGCAGATG 60.002 57.895 0.00 0.00 0.00 2.90
294 295 2.124570 CAAGGACCCCGCAGATGG 60.125 66.667 0.00 0.00 0.00 3.51
295 296 2.610859 AAGGACCCCGCAGATGGT 60.611 61.111 0.00 0.00 35.24 3.55
296 297 2.971598 AAGGACCCCGCAGATGGTG 61.972 63.158 0.00 0.00 32.77 4.17
304 305 3.889227 GCAGATGGTGCGCTACAA 58.111 55.556 9.73 0.00 43.99 2.41
305 306 2.170738 GCAGATGGTGCGCTACAAA 58.829 52.632 9.73 0.00 43.99 2.83
306 307 0.521291 GCAGATGGTGCGCTACAAAA 59.479 50.000 9.73 0.00 43.99 2.44
307 308 1.466360 GCAGATGGTGCGCTACAAAAG 60.466 52.381 9.73 3.07 43.99 2.27
316 317 1.433471 GCTACAAAAGCCATCCCGC 59.567 57.895 0.00 0.00 46.25 6.13
317 318 1.721487 CTACAAAAGCCATCCCGCG 59.279 57.895 0.00 0.00 0.00 6.46
318 319 0.742990 CTACAAAAGCCATCCCGCGA 60.743 55.000 8.23 0.00 0.00 5.87
319 320 0.321741 TACAAAAGCCATCCCGCGAA 60.322 50.000 8.23 0.00 0.00 4.70
320 321 1.175983 ACAAAAGCCATCCCGCGAAA 61.176 50.000 8.23 0.00 0.00 3.46
321 322 0.732538 CAAAAGCCATCCCGCGAAAC 60.733 55.000 8.23 0.00 0.00 2.78
322 323 1.175983 AAAAGCCATCCCGCGAAACA 61.176 50.000 8.23 0.00 0.00 2.83
323 324 1.175983 AAAGCCATCCCGCGAAACAA 61.176 50.000 8.23 0.00 0.00 2.83
324 325 1.862602 AAGCCATCCCGCGAAACAAC 61.863 55.000 8.23 0.00 0.00 3.32
325 326 2.622011 GCCATCCCGCGAAACAACA 61.622 57.895 8.23 0.00 0.00 3.33
326 327 1.933115 GCCATCCCGCGAAACAACAT 61.933 55.000 8.23 0.00 0.00 2.71
327 328 0.179166 CCATCCCGCGAAACAACATG 60.179 55.000 8.23 0.00 0.00 3.21
328 329 0.798009 CATCCCGCGAAACAACATGC 60.798 55.000 8.23 0.00 0.00 4.06
331 332 2.553770 CGCGAAACAACATGCGGA 59.446 55.556 0.00 0.00 46.31 5.54
332 333 1.792057 CGCGAAACAACATGCGGAC 60.792 57.895 0.00 0.00 46.31 4.79
333 334 1.574428 GCGAAACAACATGCGGACT 59.426 52.632 0.00 0.00 0.00 3.85
334 335 0.793861 GCGAAACAACATGCGGACTA 59.206 50.000 0.00 0.00 0.00 2.59
335 336 1.463528 GCGAAACAACATGCGGACTAC 60.464 52.381 0.00 0.00 0.00 2.73
336 337 2.066262 CGAAACAACATGCGGACTACT 58.934 47.619 0.00 0.00 0.00 2.57
337 338 2.092211 CGAAACAACATGCGGACTACTC 59.908 50.000 0.00 0.00 0.00 2.59
338 339 2.094762 AACAACATGCGGACTACTCC 57.905 50.000 0.00 0.00 0.00 3.85
339 340 0.249398 ACAACATGCGGACTACTCCC 59.751 55.000 0.00 0.00 31.93 4.30
340 341 0.249120 CAACATGCGGACTACTCCCA 59.751 55.000 0.00 0.00 31.93 4.37
341 342 0.537188 AACATGCGGACTACTCCCAG 59.463 55.000 0.00 0.00 31.93 4.45
342 343 0.324368 ACATGCGGACTACTCCCAGA 60.324 55.000 0.00 0.00 31.93 3.86
343 344 0.824109 CATGCGGACTACTCCCAGAA 59.176 55.000 0.00 0.00 31.93 3.02
344 345 1.414181 CATGCGGACTACTCCCAGAAT 59.586 52.381 0.00 0.00 31.93 2.40
345 346 2.447408 TGCGGACTACTCCCAGAATA 57.553 50.000 0.00 0.00 31.93 1.75
346 347 2.742348 TGCGGACTACTCCCAGAATAA 58.258 47.619 0.00 0.00 31.93 1.40
347 348 3.305720 TGCGGACTACTCCCAGAATAAT 58.694 45.455 0.00 0.00 31.93 1.28
348 349 4.476297 TGCGGACTACTCCCAGAATAATA 58.524 43.478 0.00 0.00 31.93 0.98
349 350 4.897076 TGCGGACTACTCCCAGAATAATAA 59.103 41.667 0.00 0.00 31.93 1.40
350 351 5.010719 TGCGGACTACTCCCAGAATAATAAG 59.989 44.000 0.00 0.00 31.93 1.73
351 352 5.471257 CGGACTACTCCCAGAATAATAAGC 58.529 45.833 0.00 0.00 31.93 3.09
352 353 5.010719 CGGACTACTCCCAGAATAATAAGCA 59.989 44.000 0.00 0.00 31.93 3.91
353 354 6.224584 GGACTACTCCCAGAATAATAAGCAC 58.775 44.000 0.00 0.00 0.00 4.40
354 355 6.183360 GGACTACTCCCAGAATAATAAGCACA 60.183 42.308 0.00 0.00 0.00 4.57
355 356 6.821388 ACTACTCCCAGAATAATAAGCACAG 58.179 40.000 0.00 0.00 0.00 3.66
356 357 5.041191 ACTCCCAGAATAATAAGCACAGG 57.959 43.478 0.00 0.00 0.00 4.00
357 358 4.721776 ACTCCCAGAATAATAAGCACAGGA 59.278 41.667 0.00 0.00 0.00 3.86
358 359 5.163258 ACTCCCAGAATAATAAGCACAGGAG 60.163 44.000 0.00 0.00 42.30 3.69
359 360 4.968719 TCCCAGAATAATAAGCACAGGAGA 59.031 41.667 0.00 0.00 0.00 3.71
360 361 5.070981 TCCCAGAATAATAAGCACAGGAGAG 59.929 44.000 0.00 0.00 0.00 3.20
361 362 5.303971 CCAGAATAATAAGCACAGGAGAGG 58.696 45.833 0.00 0.00 0.00 3.69
362 363 5.070981 CCAGAATAATAAGCACAGGAGAGGA 59.929 44.000 0.00 0.00 0.00 3.71
363 364 6.408548 CCAGAATAATAAGCACAGGAGAGGAA 60.409 42.308 0.00 0.00 0.00 3.36
364 365 6.705381 CAGAATAATAAGCACAGGAGAGGAAG 59.295 42.308 0.00 0.00 0.00 3.46
365 366 3.922171 AATAAGCACAGGAGAGGAAGG 57.078 47.619 0.00 0.00 0.00 3.46
366 367 0.905357 TAAGCACAGGAGAGGAAGGC 59.095 55.000 0.00 0.00 0.00 4.35
367 368 2.125350 GCACAGGAGAGGAAGGCG 60.125 66.667 0.00 0.00 0.00 5.52
368 369 2.948720 GCACAGGAGAGGAAGGCGT 61.949 63.158 0.00 0.00 0.00 5.68
369 370 1.079543 CACAGGAGAGGAAGGCGTG 60.080 63.158 0.00 0.00 0.00 5.34
370 371 1.534235 ACAGGAGAGGAAGGCGTGT 60.534 57.895 0.00 0.00 0.00 4.49
371 372 1.079543 CAGGAGAGGAAGGCGTGTG 60.080 63.158 0.00 0.00 0.00 3.82
372 373 1.534235 AGGAGAGGAAGGCGTGTGT 60.534 57.895 0.00 0.00 0.00 3.72
373 374 0.251653 AGGAGAGGAAGGCGTGTGTA 60.252 55.000 0.00 0.00 0.00 2.90
374 375 0.606604 GGAGAGGAAGGCGTGTGTAA 59.393 55.000 0.00 0.00 0.00 2.41
375 376 1.672145 GGAGAGGAAGGCGTGTGTAAC 60.672 57.143 0.00 0.00 37.35 2.50
376 377 0.320697 AGAGGAAGGCGTGTGTAACC 59.679 55.000 0.00 0.00 34.36 2.85
377 378 0.034337 GAGGAAGGCGTGTGTAACCA 59.966 55.000 0.00 0.00 34.36 3.67
385 386 1.666700 GCGTGTGTAACCAAACTCACA 59.333 47.619 9.13 0.00 41.62 3.58
438 439 1.270550 CCTTTCAGCGGCAAAGAACAT 59.729 47.619 12.77 0.00 33.34 2.71
473 487 2.121291 TACATCTTGGCATGCGGAAA 57.879 45.000 12.44 5.28 0.00 3.13
474 488 1.477553 ACATCTTGGCATGCGGAAAT 58.522 45.000 12.44 0.00 0.00 2.17
475 489 1.826720 ACATCTTGGCATGCGGAAATT 59.173 42.857 12.44 0.00 0.00 1.82
481 495 0.936297 GGCATGCGGAAATTGCGATC 60.936 55.000 11.83 0.00 37.25 3.69
482 496 1.264141 GCATGCGGAAATTGCGATCG 61.264 55.000 11.83 11.69 30.86 3.69
563 577 2.125106 GCCAACAGTAGGAGGCCG 60.125 66.667 0.00 0.00 41.25 6.13
609 623 4.175337 GGCACATCCCGCAGCCTA 62.175 66.667 0.00 0.00 43.70 3.93
730 749 3.117372 CCGACGAGGCGGTCTATT 58.883 61.111 9.61 0.00 46.07 1.73
798 817 0.457851 AGGCGGTCTCAGATTCGAAG 59.542 55.000 3.35 0.00 0.00 3.79
812 831 1.801913 CGAAGGACACGCGAAGGAG 60.802 63.158 15.93 0.00 0.00 3.69
813 832 1.446272 GAAGGACACGCGAAGGAGG 60.446 63.158 15.93 0.00 0.00 4.30
814 833 1.874345 GAAGGACACGCGAAGGAGGA 61.874 60.000 15.93 0.00 0.00 3.71
1121 1160 2.653702 GCGGGGGAGATCTGATCG 59.346 66.667 11.73 0.00 0.00 3.69
1149 1188 3.896133 GCCGCCATGATGCACCAG 61.896 66.667 0.00 0.00 0.00 4.00
1674 1741 0.818296 CCTCTACAAGGTAGCACGCT 59.182 55.000 0.00 0.00 40.67 5.07
1678 1747 3.323243 TCTACAAGGTAGCACGCTTTTC 58.677 45.455 0.00 0.00 0.00 2.29
1708 1777 9.587772 TTCAAAGTTCAAATTTCAAATCCGTTA 57.412 25.926 0.00 0.00 0.00 3.18
1709 1778 9.243637 TCAAAGTTCAAATTTCAAATCCGTTAG 57.756 29.630 0.00 0.00 0.00 2.34
1710 1779 9.030301 CAAAGTTCAAATTTCAAATCCGTTAGT 57.970 29.630 0.00 0.00 0.00 2.24
1712 1781 9.673454 AAGTTCAAATTTCAAATCCGTTAGTAC 57.327 29.630 0.00 0.00 0.00 2.73
1753 1823 7.581213 TGGCAACTCAATATTTTAATCCGAT 57.419 32.000 0.00 0.00 37.61 4.18
1754 1824 7.648142 TGGCAACTCAATATTTTAATCCGATC 58.352 34.615 0.00 0.00 37.61 3.69
1923 1993 0.173708 CACCAGGCTCCTCGTAAGTC 59.826 60.000 0.00 0.00 39.48 3.01
1924 1994 0.971447 ACCAGGCTCCTCGTAAGTCC 60.971 60.000 0.00 0.00 39.48 3.85
1925 1995 1.677637 CCAGGCTCCTCGTAAGTCCC 61.678 65.000 0.00 0.00 39.48 4.46
1926 1996 0.684805 CAGGCTCCTCGTAAGTCCCT 60.685 60.000 0.00 0.00 39.48 4.20
1932 2013 2.171870 CTCCTCGTAAGTCCCTCTCTCT 59.828 54.545 0.00 0.00 39.48 3.10
1970 2051 4.128925 TCAAATCCAGTTCAGATCGAGG 57.871 45.455 0.00 0.00 0.00 4.63
2006 2087 5.560724 CCCGATATGGTAAGAATCAATGGT 58.439 41.667 0.00 0.00 35.15 3.55
2008 2089 6.230472 CCGATATGGTAAGAATCAATGGTGA 58.770 40.000 0.00 0.00 38.41 4.02
2009 2090 6.147821 CCGATATGGTAAGAATCAATGGTGAC 59.852 42.308 0.00 0.00 36.31 3.67
2028 2112 6.317642 TGGTGACATTAATTAACTCGATTGGG 59.682 38.462 0.00 0.00 33.40 4.12
2036 2120 1.238439 AACTCGATTGGGTTGTGCTG 58.762 50.000 0.00 0.00 0.00 4.41
2534 2618 3.521796 GGCAAGAAGATGGCCGCC 61.522 66.667 1.04 1.04 39.79 6.13
2535 2619 3.880846 GCAAGAAGATGGCCGCCG 61.881 66.667 4.58 0.00 0.00 6.46
2536 2620 3.880846 CAAGAAGATGGCCGCCGC 61.881 66.667 4.58 0.00 0.00 6.53
2591 2687 0.877649 CGCAGCCATTCTACTCGCAT 60.878 55.000 0.00 0.00 0.00 4.73
2771 2867 3.394836 GCAGCCGGGGAGAAGACT 61.395 66.667 2.18 0.00 0.00 3.24
2794 2890 0.604780 GAGGAGCAGAGCAGCAACAA 60.605 55.000 0.00 0.00 36.85 2.83
2795 2891 0.605860 AGGAGCAGAGCAGCAACAAG 60.606 55.000 0.00 0.00 36.85 3.16
2796 2892 0.604780 GGAGCAGAGCAGCAACAAGA 60.605 55.000 0.00 0.00 36.85 3.02
2800 2896 0.879765 CAGAGCAGCAACAAGAAGGG 59.120 55.000 0.00 0.00 0.00 3.95
2824 2920 1.784525 GACAAGAACCAGGACGACAG 58.215 55.000 0.00 0.00 0.00 3.51
2827 2923 0.468226 AAGAACCAGGACGACAGCAA 59.532 50.000 0.00 0.00 0.00 3.91
3203 3319 2.401195 GAGTTTCTGCATCGCGGC 59.599 61.111 6.13 2.62 34.49 6.53
3204 3320 2.046892 AGTTTCTGCATCGCGGCT 60.047 55.556 6.13 0.00 34.49 5.52
3205 3321 1.639298 GAGTTTCTGCATCGCGGCTT 61.639 55.000 6.13 0.00 34.49 4.35
3206 3322 1.210155 GTTTCTGCATCGCGGCTTT 59.790 52.632 6.13 0.00 34.49 3.51
3207 3323 0.446222 GTTTCTGCATCGCGGCTTTA 59.554 50.000 6.13 0.00 34.49 1.85
3264 3381 1.731424 CGACATTACCGCTCGACTTGT 60.731 52.381 0.00 0.00 0.00 3.16
3267 3384 3.135994 ACATTACCGCTCGACTTGTTTT 58.864 40.909 0.00 0.00 0.00 2.43
3438 3567 4.100035 AGTTACCTGATTGCATCTCGATCA 59.900 41.667 0.00 0.00 42.01 2.92
3439 3568 3.766068 ACCTGATTGCATCTCGATCAT 57.234 42.857 0.00 0.00 42.97 2.45
3559 3688 6.696148 CAGAAATTTAGCTTGATTGCATCTCC 59.304 38.462 0.00 0.00 34.99 3.71
3614 3921 2.202756 GATCGTCACCACCGAGGC 60.203 66.667 0.00 0.00 43.14 4.70
3649 3961 0.811281 CTTTTTGGTGGGCGATCTCC 59.189 55.000 0.00 0.00 0.00 3.71
3650 3962 0.111446 TTTTTGGTGGGCGATCTCCA 59.889 50.000 3.71 2.27 0.00 3.86
3651 3963 0.111446 TTTTGGTGGGCGATCTCCAA 59.889 50.000 3.71 7.54 38.04 3.53
3652 3964 0.331278 TTTGGTGGGCGATCTCCAAT 59.669 50.000 3.71 0.00 39.27 3.16
3655 3967 1.774254 TGGTGGGCGATCTCCAATAAT 59.226 47.619 3.71 0.00 35.86 1.28
3656 3968 2.224523 TGGTGGGCGATCTCCAATAATC 60.225 50.000 3.71 0.00 35.86 1.75
3657 3969 2.039084 GGTGGGCGATCTCCAATAATCT 59.961 50.000 3.71 0.00 35.86 2.40
3658 3970 3.496870 GGTGGGCGATCTCCAATAATCTT 60.497 47.826 3.71 0.00 35.86 2.40
3659 3971 4.137543 GTGGGCGATCTCCAATAATCTTT 58.862 43.478 3.71 0.00 35.86 2.52
3660 3972 4.580580 GTGGGCGATCTCCAATAATCTTTT 59.419 41.667 3.71 0.00 35.86 2.27
3695 4017 3.741476 GCAGCAACAAGGAGGCCG 61.741 66.667 0.00 0.00 0.00 6.13
3696 4018 2.032528 CAGCAACAAGGAGGCCGA 59.967 61.111 0.00 0.00 0.00 5.54
3717 4081 7.375017 GGCCGACTAAAACGAACATATTATTTG 59.625 37.037 0.00 0.00 0.00 2.32
3720 4084 9.417284 CGACTAAAACGAACATATTATTTGTCC 57.583 33.333 0.00 0.00 0.00 4.02
3721 4085 9.712359 GACTAAAACGAACATATTATTTGTCCC 57.288 33.333 0.00 0.00 0.00 4.46
3722 4086 9.457436 ACTAAAACGAACATATTATTTGTCCCT 57.543 29.630 0.00 0.00 0.00 4.20
3723 4087 9.931210 CTAAAACGAACATATTATTTGTCCCTC 57.069 33.333 0.00 0.00 0.00 4.30
3724 4088 6.937436 AACGAACATATTATTTGTCCCTCC 57.063 37.500 0.00 0.00 0.00 4.30
3725 4089 5.996644 ACGAACATATTATTTGTCCCTCCA 58.003 37.500 0.00 0.00 0.00 3.86
3726 4090 5.820947 ACGAACATATTATTTGTCCCTCCAC 59.179 40.000 0.00 0.00 0.00 4.02
3728 4092 5.994416 ACATATTATTTGTCCCTCCACCT 57.006 39.130 0.00 0.00 0.00 4.00
3730 4094 5.672194 ACATATTATTTGTCCCTCCACCTCT 59.328 40.000 0.00 0.00 0.00 3.69
3732 4096 5.632034 ATTATTTGTCCCTCCACCTCTAC 57.368 43.478 0.00 0.00 0.00 2.59
3733 4097 2.715763 TTTGTCCCTCCACCTCTACT 57.284 50.000 0.00 0.00 0.00 2.57
3734 4098 2.715763 TTGTCCCTCCACCTCTACTT 57.284 50.000 0.00 0.00 0.00 2.24
3735 4099 3.839323 TTGTCCCTCCACCTCTACTTA 57.161 47.619 0.00 0.00 0.00 2.24
3745 4109 7.201929 CCCTCCACCTCTACTTATAAGAAAGTC 60.202 44.444 19.38 0.00 40.20 3.01
3763 4134 0.322366 TCGGCCATTCAACTGCATCA 60.322 50.000 2.24 0.00 0.00 3.07
3774 4145 9.199982 CCATTCAACTGCATCATTTAAATATCC 57.800 33.333 0.00 0.00 0.00 2.59
3775 4146 8.908678 CATTCAACTGCATCATTTAAATATCCG 58.091 33.333 0.00 0.00 0.00 4.18
3805 4176 3.872182 TCAGCGTAAATTTTATAGCGCCA 59.128 39.130 2.29 0.00 45.00 5.69
3810 4181 5.115021 GCGTAAATTTTATAGCGCCAATCAC 59.885 40.000 2.29 0.00 39.11 3.06
3841 4212 8.757164 AAAAGAGGCGGAATAGTTTTTAAATG 57.243 30.769 0.00 0.00 0.00 2.32
3842 4213 7.462571 AAGAGGCGGAATAGTTTTTAAATGT 57.537 32.000 0.00 0.00 0.00 2.71
3843 4214 6.852664 AGAGGCGGAATAGTTTTTAAATGTG 58.147 36.000 0.00 0.00 0.00 3.21
4009 4380 1.569493 GCACGCACGAACATCAAGT 59.431 52.632 0.00 0.00 0.00 3.16
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 1.227147 GTGCGGATTCGGATTCGGA 60.227 57.895 6.50 0.00 39.30 4.55
1 2 2.585869 CGTGCGGATTCGGATTCGG 61.586 63.158 6.50 3.84 39.30 4.30
2 3 2.920869 CGTGCGGATTCGGATTCG 59.079 61.111 0.00 0.00 39.30 3.34
3 4 2.626455 GCGTGCGGATTCGGATTC 59.374 61.111 0.00 0.00 39.30 2.52
4 5 3.261951 CGCGTGCGGATTCGGATT 61.262 61.111 6.30 0.00 39.30 3.01
5 6 2.616786 TAACGCGTGCGGATTCGGAT 62.617 55.000 14.98 0.00 44.69 4.18
6 7 2.616786 ATAACGCGTGCGGATTCGGA 62.617 55.000 14.98 0.00 44.69 4.55
7 8 1.758319 AATAACGCGTGCGGATTCGG 61.758 55.000 14.98 0.00 44.69 4.30
9 10 0.042448 GGAATAACGCGTGCGGATTC 60.042 55.000 24.18 24.18 44.69 2.52
10 11 1.758319 CGGAATAACGCGTGCGGATT 61.758 55.000 14.98 16.26 44.69 3.01
11 12 2.235016 CGGAATAACGCGTGCGGAT 61.235 57.895 14.98 8.54 44.69 4.18
12 13 2.616786 ATCGGAATAACGCGTGCGGA 62.617 55.000 14.98 12.92 44.69 5.54
13 14 1.758319 AATCGGAATAACGCGTGCGG 61.758 55.000 14.98 7.67 44.69 5.69
14 15 0.381428 GAATCGGAATAACGCGTGCG 60.381 55.000 14.98 13.39 46.03 5.34
15 16 0.381428 CGAATCGGAATAACGCGTGC 60.381 55.000 14.98 2.39 0.00 5.34
16 17 3.684355 CGAATCGGAATAACGCGTG 57.316 52.632 14.98 0.00 0.00 5.34
28 29 2.202932 CAGGGTGCCTCCGAATCG 60.203 66.667 0.00 0.00 37.00 3.34
29 30 2.514824 GCAGGGTGCCTCCGAATC 60.515 66.667 0.00 0.00 37.42 2.52
30 31 2.905996 TTGCAGGGTGCCTCCGAAT 61.906 57.895 0.00 0.00 44.23 3.34
31 32 3.565214 TTGCAGGGTGCCTCCGAA 61.565 61.111 0.00 0.00 44.23 4.30
32 33 4.329545 GTTGCAGGGTGCCTCCGA 62.330 66.667 0.00 0.00 44.23 4.55
34 35 3.808218 TTGGTTGCAGGGTGCCTCC 62.808 63.158 0.00 0.00 44.23 4.30
35 36 2.203480 TTGGTTGCAGGGTGCCTC 60.203 61.111 0.00 0.00 44.23 4.70
36 37 2.521708 GTTGGTTGCAGGGTGCCT 60.522 61.111 0.00 0.00 44.23 4.75
37 38 0.897863 TATGTTGGTTGCAGGGTGCC 60.898 55.000 0.00 0.00 44.23 5.01
38 39 0.965439 TTATGTTGGTTGCAGGGTGC 59.035 50.000 0.00 0.00 45.29 5.01
39 40 2.030007 CAGTTATGTTGGTTGCAGGGTG 60.030 50.000 0.00 0.00 0.00 4.61
40 41 2.158534 TCAGTTATGTTGGTTGCAGGGT 60.159 45.455 0.00 0.00 0.00 4.34
41 42 2.513753 TCAGTTATGTTGGTTGCAGGG 58.486 47.619 0.00 0.00 0.00 4.45
42 43 3.820467 TCTTCAGTTATGTTGGTTGCAGG 59.180 43.478 0.00 0.00 0.00 4.85
43 44 5.633830 ATCTTCAGTTATGTTGGTTGCAG 57.366 39.130 0.00 0.00 0.00 4.41
44 45 7.230510 ACTTAATCTTCAGTTATGTTGGTTGCA 59.769 33.333 0.00 0.00 0.00 4.08
45 46 7.593825 ACTTAATCTTCAGTTATGTTGGTTGC 58.406 34.615 0.00 0.00 0.00 4.17
47 48 8.932791 CGTACTTAATCTTCAGTTATGTTGGTT 58.067 33.333 0.00 0.00 0.00 3.67
48 49 7.064253 GCGTACTTAATCTTCAGTTATGTTGGT 59.936 37.037 0.00 0.00 0.00 3.67
49 50 7.399523 GCGTACTTAATCTTCAGTTATGTTGG 58.600 38.462 0.00 0.00 0.00 3.77
50 51 7.277981 AGGCGTACTTAATCTTCAGTTATGTTG 59.722 37.037 0.00 0.00 0.00 3.33
51 52 7.277981 CAGGCGTACTTAATCTTCAGTTATGTT 59.722 37.037 0.00 0.00 0.00 2.71
52 53 6.757010 CAGGCGTACTTAATCTTCAGTTATGT 59.243 38.462 0.00 0.00 0.00 2.29
53 54 6.978659 TCAGGCGTACTTAATCTTCAGTTATG 59.021 38.462 0.00 0.00 0.00 1.90
54 55 6.979238 GTCAGGCGTACTTAATCTTCAGTTAT 59.021 38.462 0.00 0.00 0.00 1.89
55 56 6.071784 TGTCAGGCGTACTTAATCTTCAGTTA 60.072 38.462 0.00 0.00 0.00 2.24
56 57 5.169295 GTCAGGCGTACTTAATCTTCAGTT 58.831 41.667 0.00 0.00 0.00 3.16
57 58 4.219944 TGTCAGGCGTACTTAATCTTCAGT 59.780 41.667 0.00 0.00 0.00 3.41
58 59 4.563184 GTGTCAGGCGTACTTAATCTTCAG 59.437 45.833 0.00 0.00 0.00 3.02
59 60 4.219944 AGTGTCAGGCGTACTTAATCTTCA 59.780 41.667 0.00 0.00 0.00 3.02
60 61 4.745649 AGTGTCAGGCGTACTTAATCTTC 58.254 43.478 0.00 0.00 0.00 2.87
61 62 4.674623 CGAGTGTCAGGCGTACTTAATCTT 60.675 45.833 0.00 0.00 0.00 2.40
62 63 3.181499 CGAGTGTCAGGCGTACTTAATCT 60.181 47.826 0.00 0.00 0.00 2.40
63 64 3.106672 CGAGTGTCAGGCGTACTTAATC 58.893 50.000 0.00 0.00 0.00 1.75
64 65 2.490903 ACGAGTGTCAGGCGTACTTAAT 59.509 45.455 0.00 0.00 36.37 1.40
65 66 1.881973 ACGAGTGTCAGGCGTACTTAA 59.118 47.619 0.00 0.00 36.37 1.85
66 67 1.198408 CACGAGTGTCAGGCGTACTTA 59.802 52.381 0.00 0.00 36.37 2.24
67 68 0.039437 CACGAGTGTCAGGCGTACTT 60.039 55.000 0.00 0.00 36.37 2.24
68 69 1.579932 CACGAGTGTCAGGCGTACT 59.420 57.895 0.00 0.00 36.37 2.73
69 70 2.087009 GCACGAGTGTCAGGCGTAC 61.087 63.158 5.07 0.00 36.37 3.67
70 71 2.196382 GAGCACGAGTGTCAGGCGTA 62.196 60.000 5.07 0.00 36.37 4.42
71 72 3.559657 GAGCACGAGTGTCAGGCGT 62.560 63.158 5.07 0.00 39.04 5.68
72 73 2.807045 GAGCACGAGTGTCAGGCG 60.807 66.667 5.07 0.00 0.00 5.52
73 74 1.079543 ATGAGCACGAGTGTCAGGC 60.080 57.895 5.07 0.00 0.00 4.85
74 75 0.799917 CGATGAGCACGAGTGTCAGG 60.800 60.000 5.07 1.78 0.00 3.86
75 76 2.646596 CGATGAGCACGAGTGTCAG 58.353 57.895 5.07 0.00 0.00 3.51
76 77 4.868195 CGATGAGCACGAGTGTCA 57.132 55.556 5.07 7.77 0.00 3.58
87 88 2.279985 AGCTGATGCGGCGATGAG 60.280 61.111 12.98 6.25 45.42 2.90
88 89 2.279717 GAGCTGATGCGGCGATGA 60.280 61.111 12.98 0.00 45.42 2.92
89 90 2.586914 TGAGCTGATGCGGCGATG 60.587 61.111 12.98 0.00 45.42 3.84
90 91 2.279985 CTGAGCTGATGCGGCGAT 60.280 61.111 12.98 0.33 45.42 4.58
94 95 4.172512 AGGGCTGAGCTGATGCGG 62.173 66.667 3.72 0.00 45.42 5.69
95 96 2.588314 GAGGGCTGAGCTGATGCG 60.588 66.667 3.72 0.00 45.42 4.73
96 97 2.203181 GGAGGGCTGAGCTGATGC 60.203 66.667 3.72 0.00 40.05 3.91
97 98 1.335882 TGAGGAGGGCTGAGCTGATG 61.336 60.000 3.72 0.00 0.00 3.07
98 99 1.002662 TGAGGAGGGCTGAGCTGAT 59.997 57.895 3.72 0.00 0.00 2.90
99 100 1.986757 GTGAGGAGGGCTGAGCTGA 60.987 63.158 3.72 0.00 0.00 4.26
100 101 2.241479 CTGTGAGGAGGGCTGAGCTG 62.241 65.000 3.72 0.00 0.00 4.24
101 102 1.988956 CTGTGAGGAGGGCTGAGCT 60.989 63.158 3.72 0.00 0.00 4.09
102 103 1.835927 AACTGTGAGGAGGGCTGAGC 61.836 60.000 0.00 0.00 0.00 4.26
103 104 0.036577 CAACTGTGAGGAGGGCTGAG 60.037 60.000 0.00 0.00 0.00 3.35
104 105 0.764369 ACAACTGTGAGGAGGGCTGA 60.764 55.000 0.00 0.00 0.00 4.26
105 106 1.757306 ACAACTGTGAGGAGGGCTG 59.243 57.895 0.00 0.00 0.00 4.85
106 107 4.320844 ACAACTGTGAGGAGGGCT 57.679 55.556 0.00 0.00 0.00 5.19
116 117 1.011333 GGTTACACGCACACAACTGT 58.989 50.000 0.00 0.00 0.00 3.55
117 118 1.010580 TGGTTACACGCACACAACTG 58.989 50.000 0.00 0.00 0.00 3.16
118 119 1.740297 TTGGTTACACGCACACAACT 58.260 45.000 0.00 0.00 0.00 3.16
119 120 2.159490 AGTTTGGTTACACGCACACAAC 60.159 45.455 0.00 0.00 0.00 3.32
120 121 2.085320 AGTTTGGTTACACGCACACAA 58.915 42.857 0.00 0.00 0.00 3.33
121 122 1.740297 AGTTTGGTTACACGCACACA 58.260 45.000 0.00 0.00 0.00 3.72
122 123 2.836479 AAGTTTGGTTACACGCACAC 57.164 45.000 0.00 0.00 0.00 3.82
123 124 3.851976 AAAAGTTTGGTTACACGCACA 57.148 38.095 0.00 0.00 0.00 4.57
159 160 9.815936 CTATTAATGAAAAAGGCAAAGCTTTTG 57.184 29.630 9.53 6.62 37.86 2.44
160 161 9.777297 TCTATTAATGAAAAAGGCAAAGCTTTT 57.223 25.926 9.53 0.00 39.44 2.27
161 162 9.428097 CTCTATTAATGAAAAAGGCAAAGCTTT 57.572 29.630 5.69 5.69 0.00 3.51
162 163 8.806146 TCTCTATTAATGAAAAAGGCAAAGCTT 58.194 29.630 0.00 0.00 0.00 3.74
163 164 8.353423 TCTCTATTAATGAAAAAGGCAAAGCT 57.647 30.769 0.00 0.00 0.00 3.74
164 165 8.986477 TTCTCTATTAATGAAAAAGGCAAAGC 57.014 30.769 0.00 0.00 0.00 3.51
165 166 9.578439 CCTTCTCTATTAATGAAAAAGGCAAAG 57.422 33.333 0.00 0.00 0.00 2.77
166 167 9.308000 TCCTTCTCTATTAATGAAAAAGGCAAA 57.692 29.630 12.90 0.28 33.60 3.68
167 168 8.877864 TCCTTCTCTATTAATGAAAAAGGCAA 57.122 30.769 12.90 0.76 33.60 4.52
168 169 8.328758 TCTCCTTCTCTATTAATGAAAAAGGCA 58.671 33.333 12.90 0.00 33.60 4.75
169 170 8.738645 TCTCCTTCTCTATTAATGAAAAAGGC 57.261 34.615 12.90 0.00 33.60 4.35
177 178 9.936759 GGGAAACTATCTCCTTCTCTATTAATG 57.063 37.037 0.00 0.00 33.11 1.90
178 179 8.808092 CGGGAAACTATCTCCTTCTCTATTAAT 58.192 37.037 0.00 0.00 33.11 1.40
179 180 7.232941 CCGGGAAACTATCTCCTTCTCTATTAA 59.767 40.741 0.00 0.00 33.11 1.40
180 181 6.720288 CCGGGAAACTATCTCCTTCTCTATTA 59.280 42.308 0.00 0.00 33.11 0.98
181 182 5.540719 CCGGGAAACTATCTCCTTCTCTATT 59.459 44.000 0.00 0.00 33.11 1.73
182 183 5.081032 CCGGGAAACTATCTCCTTCTCTAT 58.919 45.833 0.00 0.00 33.11 1.98
183 184 4.079327 ACCGGGAAACTATCTCCTTCTCTA 60.079 45.833 6.32 0.00 33.11 2.43
184 185 3.301274 CCGGGAAACTATCTCCTTCTCT 58.699 50.000 0.00 0.00 33.11 3.10
185 186 3.032459 ACCGGGAAACTATCTCCTTCTC 58.968 50.000 6.32 0.00 33.11 2.87
186 187 3.117552 ACCGGGAAACTATCTCCTTCT 57.882 47.619 6.32 0.00 33.11 2.85
187 188 3.908643 AACCGGGAAACTATCTCCTTC 57.091 47.619 6.32 0.00 33.11 3.46
188 189 5.970501 ATTAACCGGGAAACTATCTCCTT 57.029 39.130 6.32 0.00 33.11 3.36
189 190 5.970501 AATTAACCGGGAAACTATCTCCT 57.029 39.130 6.32 0.00 33.11 3.69
190 191 7.228108 CCTTTAATTAACCGGGAAACTATCTCC 59.772 40.741 6.32 0.00 0.00 3.71
191 192 7.989170 TCCTTTAATTAACCGGGAAACTATCTC 59.011 37.037 6.32 0.00 0.00 2.75
192 193 7.864770 TCCTTTAATTAACCGGGAAACTATCT 58.135 34.615 6.32 0.00 0.00 1.98
193 194 8.510243 TTCCTTTAATTAACCGGGAAACTATC 57.490 34.615 6.32 0.00 31.10 2.08
194 195 8.882557 TTTCCTTTAATTAACCGGGAAACTAT 57.117 30.769 22.19 0.00 37.74 2.12
195 196 8.575589 GTTTTCCTTTAATTAACCGGGAAACTA 58.424 33.333 25.51 16.35 40.87 2.24
196 197 7.436118 GTTTTCCTTTAATTAACCGGGAAACT 58.564 34.615 25.51 0.00 40.87 2.66
197 198 6.646240 GGTTTTCCTTTAATTAACCGGGAAAC 59.354 38.462 25.16 25.16 40.87 2.78
198 199 6.757237 GGTTTTCCTTTAATTAACCGGGAAA 58.243 36.000 22.19 22.19 39.89 3.13
199 200 6.343716 GGTTTTCCTTTAATTAACCGGGAA 57.656 37.500 6.32 16.25 36.94 3.97
200 201 5.981088 GGTTTTCCTTTAATTAACCGGGA 57.019 39.130 6.32 9.88 36.94 5.14
204 205 4.618067 CGCACGGTTTTCCTTTAATTAACC 59.382 41.667 0.00 0.00 37.95 2.85
205 206 5.451039 TCGCACGGTTTTCCTTTAATTAAC 58.549 37.500 0.00 0.00 37.95 2.01
206 207 5.686159 TCGCACGGTTTTCCTTTAATTAA 57.314 34.783 0.00 0.00 37.95 1.40
207 208 5.686159 TTCGCACGGTTTTCCTTTAATTA 57.314 34.783 0.00 0.00 37.95 1.40
208 209 4.571372 TTCGCACGGTTTTCCTTTAATT 57.429 36.364 0.00 0.00 37.95 1.40
209 210 4.571372 TTTCGCACGGTTTTCCTTTAAT 57.429 36.364 0.00 0.00 37.95 1.40
210 211 4.104066 GTTTTCGCACGGTTTTCCTTTAA 58.896 39.130 0.00 0.00 37.95 1.52
211 212 3.488890 GGTTTTCGCACGGTTTTCCTTTA 60.489 43.478 0.00 0.00 37.95 1.85
212 213 2.532235 GTTTTCGCACGGTTTTCCTTT 58.468 42.857 0.00 0.00 37.95 3.11
213 214 1.202325 GGTTTTCGCACGGTTTTCCTT 60.202 47.619 0.00 0.00 37.95 3.36
214 215 0.382873 GGTTTTCGCACGGTTTTCCT 59.617 50.000 0.00 0.00 37.95 3.36
215 216 0.931202 CGGTTTTCGCACGGTTTTCC 60.931 55.000 0.00 0.00 0.00 3.13
216 217 0.931202 CCGGTTTTCGCACGGTTTTC 60.931 55.000 0.00 0.00 42.53 2.29
217 218 1.064458 CCGGTTTTCGCACGGTTTT 59.936 52.632 0.00 0.00 42.53 2.43
218 219 2.716864 CCGGTTTTCGCACGGTTT 59.283 55.556 0.00 0.00 42.53 3.27
222 223 0.094046 GATGTACCGGTTTTCGCACG 59.906 55.000 15.04 0.00 37.59 5.34
223 224 1.149987 TGATGTACCGGTTTTCGCAC 58.850 50.000 15.04 3.68 37.59 5.34
224 225 1.801771 CTTGATGTACCGGTTTTCGCA 59.198 47.619 15.04 5.13 37.59 5.10
225 226 1.129811 CCTTGATGTACCGGTTTTCGC 59.870 52.381 15.04 0.00 37.59 4.70
226 227 1.735571 CCCTTGATGTACCGGTTTTCG 59.264 52.381 15.04 0.00 38.88 3.46
227 228 2.745821 GACCCTTGATGTACCGGTTTTC 59.254 50.000 15.04 8.36 0.00 2.29
228 229 2.106857 TGACCCTTGATGTACCGGTTTT 59.893 45.455 15.04 0.00 0.00 2.43
229 230 1.700739 TGACCCTTGATGTACCGGTTT 59.299 47.619 15.04 0.00 0.00 3.27
230 231 1.354101 TGACCCTTGATGTACCGGTT 58.646 50.000 15.04 0.00 0.00 4.44
231 232 1.354101 TTGACCCTTGATGTACCGGT 58.646 50.000 13.98 13.98 0.00 5.28
232 233 2.081462 GTTTGACCCTTGATGTACCGG 58.919 52.381 0.00 0.00 0.00 5.28
233 234 2.081462 GGTTTGACCCTTGATGTACCG 58.919 52.381 0.00 0.00 30.04 4.02
245 246 1.021968 GTCTGTGTGTGGGTTTGACC 58.978 55.000 0.00 0.00 37.60 4.02
246 247 1.021968 GGTCTGTGTGTGGGTTTGAC 58.978 55.000 0.00 0.00 0.00 3.18
247 248 0.106918 GGGTCTGTGTGTGGGTTTGA 60.107 55.000 0.00 0.00 0.00 2.69
248 249 1.444119 CGGGTCTGTGTGTGGGTTTG 61.444 60.000 0.00 0.00 0.00 2.93
249 250 1.153046 CGGGTCTGTGTGTGGGTTT 60.153 57.895 0.00 0.00 0.00 3.27
250 251 2.067605 TCGGGTCTGTGTGTGGGTT 61.068 57.895 0.00 0.00 0.00 4.11
251 252 2.445085 TCGGGTCTGTGTGTGGGT 60.445 61.111 0.00 0.00 0.00 4.51
252 253 2.030562 GTCGGGTCTGTGTGTGGG 59.969 66.667 0.00 0.00 0.00 4.61
253 254 0.880278 CTTGTCGGGTCTGTGTGTGG 60.880 60.000 0.00 0.00 0.00 4.17
254 255 1.498865 GCTTGTCGGGTCTGTGTGTG 61.499 60.000 0.00 0.00 0.00 3.82
255 256 1.227556 GCTTGTCGGGTCTGTGTGT 60.228 57.895 0.00 0.00 0.00 3.72
256 257 1.961277 GGCTTGTCGGGTCTGTGTG 60.961 63.158 0.00 0.00 0.00 3.82
257 258 1.978455 TTGGCTTGTCGGGTCTGTGT 61.978 55.000 0.00 0.00 0.00 3.72
258 259 1.227823 TTGGCTTGTCGGGTCTGTG 60.228 57.895 0.00 0.00 0.00 3.66
259 260 1.227853 GTTGGCTTGTCGGGTCTGT 60.228 57.895 0.00 0.00 0.00 3.41
260 261 0.817634 TTGTTGGCTTGTCGGGTCTG 60.818 55.000 0.00 0.00 0.00 3.51
261 262 0.535102 CTTGTTGGCTTGTCGGGTCT 60.535 55.000 0.00 0.00 0.00 3.85
262 263 1.515521 CCTTGTTGGCTTGTCGGGTC 61.516 60.000 0.00 0.00 0.00 4.46
263 264 1.528309 CCTTGTTGGCTTGTCGGGT 60.528 57.895 0.00 0.00 0.00 5.28
264 265 1.228124 TCCTTGTTGGCTTGTCGGG 60.228 57.895 0.00 0.00 35.26 5.14
265 266 1.515521 GGTCCTTGTTGGCTTGTCGG 61.516 60.000 0.00 0.00 35.26 4.79
266 267 1.515521 GGGTCCTTGTTGGCTTGTCG 61.516 60.000 0.00 0.00 35.26 4.35
267 268 1.179174 GGGGTCCTTGTTGGCTTGTC 61.179 60.000 0.00 0.00 35.26 3.18
268 269 1.152546 GGGGTCCTTGTTGGCTTGT 60.153 57.895 0.00 0.00 35.26 3.16
269 270 2.268076 CGGGGTCCTTGTTGGCTTG 61.268 63.158 0.00 0.00 35.26 4.01
270 271 2.115266 CGGGGTCCTTGTTGGCTT 59.885 61.111 0.00 0.00 35.26 4.35
271 272 4.660938 GCGGGGTCCTTGTTGGCT 62.661 66.667 0.00 0.00 35.26 4.75
272 273 4.966787 TGCGGGGTCCTTGTTGGC 62.967 66.667 0.00 0.00 35.26 4.52
273 274 2.484287 ATCTGCGGGGTCCTTGTTGG 62.484 60.000 0.00 0.00 37.10 3.77
274 275 1.002134 ATCTGCGGGGTCCTTGTTG 60.002 57.895 0.00 0.00 0.00 3.33
275 276 1.002134 CATCTGCGGGGTCCTTGTT 60.002 57.895 0.00 0.00 0.00 2.83
276 277 2.671070 CATCTGCGGGGTCCTTGT 59.329 61.111 0.00 0.00 0.00 3.16
277 278 2.124570 CCATCTGCGGGGTCCTTG 60.125 66.667 0.00 0.00 0.00 3.61
278 279 2.610859 ACCATCTGCGGGGTCCTT 60.611 61.111 0.00 0.00 29.34 3.36
279 280 3.402681 CACCATCTGCGGGGTCCT 61.403 66.667 0.00 0.00 34.45 3.85
287 288 0.521291 TTTTGTAGCGCACCATCTGC 59.479 50.000 11.47 0.00 43.21 4.26
288 289 1.466360 GCTTTTGTAGCGCACCATCTG 60.466 52.381 11.47 0.00 40.71 2.90
289 290 0.804989 GCTTTTGTAGCGCACCATCT 59.195 50.000 11.47 0.00 40.71 2.90
290 291 3.312709 GCTTTTGTAGCGCACCATC 57.687 52.632 11.47 0.00 40.71 3.51
299 300 0.742990 TCGCGGGATGGCTTTTGTAG 60.743 55.000 6.13 0.00 0.00 2.74
300 301 0.321741 TTCGCGGGATGGCTTTTGTA 60.322 50.000 6.13 0.00 0.00 2.41
301 302 1.175983 TTTCGCGGGATGGCTTTTGT 61.176 50.000 6.13 0.00 0.00 2.83
302 303 0.732538 GTTTCGCGGGATGGCTTTTG 60.733 55.000 6.13 0.00 0.00 2.44
303 304 1.175983 TGTTTCGCGGGATGGCTTTT 61.176 50.000 6.13 0.00 0.00 2.27
304 305 1.175983 TTGTTTCGCGGGATGGCTTT 61.176 50.000 6.13 0.00 0.00 3.51
305 306 1.602323 TTGTTTCGCGGGATGGCTT 60.602 52.632 6.13 0.00 0.00 4.35
306 307 2.033448 TTGTTTCGCGGGATGGCT 59.967 55.556 6.13 0.00 0.00 4.75
307 308 1.933115 ATGTTGTTTCGCGGGATGGC 61.933 55.000 6.13 0.00 0.00 4.40
308 309 0.179166 CATGTTGTTTCGCGGGATGG 60.179 55.000 6.13 0.00 0.00 3.51
309 310 0.798009 GCATGTTGTTTCGCGGGATG 60.798 55.000 6.13 0.00 0.00 3.51
310 311 1.506262 GCATGTTGTTTCGCGGGAT 59.494 52.632 6.13 0.00 0.00 3.85
311 312 2.950673 GCATGTTGTTTCGCGGGA 59.049 55.556 6.13 0.00 0.00 5.14
312 313 2.501650 CGCATGTTGTTTCGCGGG 60.502 61.111 6.13 0.00 43.84 6.13
314 315 1.792057 GTCCGCATGTTGTTTCGCG 60.792 57.895 0.00 0.00 46.96 5.87
315 316 0.793861 TAGTCCGCATGTTGTTTCGC 59.206 50.000 0.00 0.00 0.00 4.70
316 317 2.066262 AGTAGTCCGCATGTTGTTTCG 58.934 47.619 0.00 0.00 0.00 3.46
317 318 2.415512 GGAGTAGTCCGCATGTTGTTTC 59.584 50.000 0.00 0.00 31.37 2.78
318 319 2.423577 GGAGTAGTCCGCATGTTGTTT 58.576 47.619 0.00 0.00 31.37 2.83
319 320 1.338769 GGGAGTAGTCCGCATGTTGTT 60.339 52.381 10.57 0.00 45.05 2.83
320 321 0.249398 GGGAGTAGTCCGCATGTTGT 59.751 55.000 10.57 0.00 45.05 3.32
321 322 0.249120 TGGGAGTAGTCCGCATGTTG 59.751 55.000 10.57 0.00 45.05 3.33
322 323 0.537188 CTGGGAGTAGTCCGCATGTT 59.463 55.000 10.57 0.00 45.05 2.71
323 324 0.324368 TCTGGGAGTAGTCCGCATGT 60.324 55.000 10.57 0.00 45.05 3.21
324 325 0.824109 TTCTGGGAGTAGTCCGCATG 59.176 55.000 10.57 1.15 45.05 4.06
325 326 1.794714 ATTCTGGGAGTAGTCCGCAT 58.205 50.000 10.57 0.00 45.05 4.73
326 327 2.447408 TATTCTGGGAGTAGTCCGCA 57.553 50.000 10.57 8.72 45.05 5.69
327 328 5.464030 TTATTATTCTGGGAGTAGTCCGC 57.536 43.478 10.57 4.52 45.05 5.54
328 329 5.010719 TGCTTATTATTCTGGGAGTAGTCCG 59.989 44.000 10.57 0.00 45.05 4.79
329 330 6.183360 TGTGCTTATTATTCTGGGAGTAGTCC 60.183 42.308 8.22 8.22 43.05 3.85
330 331 6.817184 TGTGCTTATTATTCTGGGAGTAGTC 58.183 40.000 0.00 0.00 0.00 2.59
331 332 6.183361 CCTGTGCTTATTATTCTGGGAGTAGT 60.183 42.308 0.00 0.00 0.00 2.73
332 333 6.042093 TCCTGTGCTTATTATTCTGGGAGTAG 59.958 42.308 0.00 0.00 0.00 2.57
333 334 5.903010 TCCTGTGCTTATTATTCTGGGAGTA 59.097 40.000 0.00 0.00 0.00 2.59
334 335 4.721776 TCCTGTGCTTATTATTCTGGGAGT 59.278 41.667 0.00 0.00 0.00 3.85
335 336 5.070981 TCTCCTGTGCTTATTATTCTGGGAG 59.929 44.000 0.00 0.00 38.25 4.30
336 337 4.968719 TCTCCTGTGCTTATTATTCTGGGA 59.031 41.667 0.00 0.00 0.00 4.37
337 338 5.296151 TCTCCTGTGCTTATTATTCTGGG 57.704 43.478 0.00 0.00 0.00 4.45
338 339 5.070981 TCCTCTCCTGTGCTTATTATTCTGG 59.929 44.000 0.00 0.00 0.00 3.86
339 340 6.166984 TCCTCTCCTGTGCTTATTATTCTG 57.833 41.667 0.00 0.00 0.00 3.02
340 341 6.183361 CCTTCCTCTCCTGTGCTTATTATTCT 60.183 42.308 0.00 0.00 0.00 2.40
341 342 5.994668 CCTTCCTCTCCTGTGCTTATTATTC 59.005 44.000 0.00 0.00 0.00 1.75
342 343 5.688766 GCCTTCCTCTCCTGTGCTTATTATT 60.689 44.000 0.00 0.00 0.00 1.40
343 344 4.202409 GCCTTCCTCTCCTGTGCTTATTAT 60.202 45.833 0.00 0.00 0.00 1.28
344 345 3.134804 GCCTTCCTCTCCTGTGCTTATTA 59.865 47.826 0.00 0.00 0.00 0.98
345 346 2.092699 GCCTTCCTCTCCTGTGCTTATT 60.093 50.000 0.00 0.00 0.00 1.40
346 347 1.488393 GCCTTCCTCTCCTGTGCTTAT 59.512 52.381 0.00 0.00 0.00 1.73
347 348 0.905357 GCCTTCCTCTCCTGTGCTTA 59.095 55.000 0.00 0.00 0.00 3.09
348 349 1.682257 GCCTTCCTCTCCTGTGCTT 59.318 57.895 0.00 0.00 0.00 3.91
349 350 2.654079 CGCCTTCCTCTCCTGTGCT 61.654 63.158 0.00 0.00 0.00 4.40
350 351 2.125350 CGCCTTCCTCTCCTGTGC 60.125 66.667 0.00 0.00 0.00 4.57
351 352 1.079543 CACGCCTTCCTCTCCTGTG 60.080 63.158 0.00 0.00 0.00 3.66
352 353 1.534235 ACACGCCTTCCTCTCCTGT 60.534 57.895 0.00 0.00 0.00 4.00
353 354 1.079543 CACACGCCTTCCTCTCCTG 60.080 63.158 0.00 0.00 0.00 3.86
354 355 0.251653 TACACACGCCTTCCTCTCCT 60.252 55.000 0.00 0.00 0.00 3.69
355 356 0.606604 TTACACACGCCTTCCTCTCC 59.393 55.000 0.00 0.00 0.00 3.71
356 357 1.672145 GGTTACACACGCCTTCCTCTC 60.672 57.143 0.00 0.00 0.00 3.20
357 358 0.320697 GGTTACACACGCCTTCCTCT 59.679 55.000 0.00 0.00 0.00 3.69
358 359 0.034337 TGGTTACACACGCCTTCCTC 59.966 55.000 0.00 0.00 0.00 3.71
359 360 0.470766 TTGGTTACACACGCCTTCCT 59.529 50.000 0.00 0.00 0.00 3.36
360 361 1.002142 GTTTGGTTACACACGCCTTCC 60.002 52.381 0.00 0.00 0.00 3.46
361 362 1.944709 AGTTTGGTTACACACGCCTTC 59.055 47.619 0.00 0.00 32.62 3.46
362 363 1.944709 GAGTTTGGTTACACACGCCTT 59.055 47.619 0.00 0.00 32.62 4.35
363 364 1.134340 TGAGTTTGGTTACACACGCCT 60.134 47.619 0.00 0.00 32.62 5.52
364 365 1.003223 GTGAGTTTGGTTACACACGCC 60.003 52.381 0.00 0.00 32.62 5.68
365 366 1.666700 TGTGAGTTTGGTTACACACGC 59.333 47.619 0.00 0.00 40.89 5.34
366 367 2.286184 GCTGTGAGTTTGGTTACACACG 60.286 50.000 0.00 0.00 40.89 4.49
367 368 2.943033 AGCTGTGAGTTTGGTTACACAC 59.057 45.455 0.00 0.00 39.23 3.82
368 369 2.942376 CAGCTGTGAGTTTGGTTACACA 59.058 45.455 5.25 0.00 40.22 3.72
369 370 2.287009 GCAGCTGTGAGTTTGGTTACAC 60.287 50.000 16.64 0.00 0.00 2.90
370 371 1.946768 GCAGCTGTGAGTTTGGTTACA 59.053 47.619 16.64 0.00 0.00 2.41
371 372 1.946768 TGCAGCTGTGAGTTTGGTTAC 59.053 47.619 16.64 0.00 0.00 2.50
372 373 2.158827 TCTGCAGCTGTGAGTTTGGTTA 60.159 45.455 16.64 0.00 0.00 2.85
373 374 1.027357 CTGCAGCTGTGAGTTTGGTT 58.973 50.000 16.64 0.00 0.00 3.67
374 375 0.181114 TCTGCAGCTGTGAGTTTGGT 59.819 50.000 16.64 0.00 0.00 3.67
375 376 0.873054 CTCTGCAGCTGTGAGTTTGG 59.127 55.000 22.32 5.95 0.00 3.28
376 377 1.590932 ACTCTGCAGCTGTGAGTTTG 58.409 50.000 27.17 15.58 37.76 2.93
377 378 1.945394 CAACTCTGCAGCTGTGAGTTT 59.055 47.619 33.77 23.75 45.32 2.66
458 472 0.108709 GCAATTTCCGCATGCCAAGA 60.109 50.000 13.15 3.67 34.03 3.02
545 559 2.125106 GGCCTCCTACTGTTGGCG 60.125 66.667 3.24 0.00 45.75 5.69
576 590 1.299089 GCCTTGTTTGTGTCACGGC 60.299 57.895 0.00 0.00 41.52 5.68
758 777 1.435577 GCCTCGCCTCGTTCTAAAAA 58.564 50.000 0.00 0.00 0.00 1.94
759 778 0.734942 CGCCTCGCCTCGTTCTAAAA 60.735 55.000 0.00 0.00 0.00 1.52
760 779 1.153901 CGCCTCGCCTCGTTCTAAA 60.154 57.895 0.00 0.00 0.00 1.85
761 780 1.989966 CTCGCCTCGCCTCGTTCTAA 61.990 60.000 0.00 0.00 0.00 2.10
762 781 2.437180 TCGCCTCGCCTCGTTCTA 60.437 61.111 0.00 0.00 0.00 2.10
763 782 3.816524 CTCGCCTCGCCTCGTTCT 61.817 66.667 0.00 0.00 0.00 3.01
764 783 4.856607 CCTCGCCTCGCCTCGTTC 62.857 72.222 0.00 0.00 0.00 3.95
787 806 0.456142 CGCGTGTCCTTCGAATCTGA 60.456 55.000 0.00 0.00 0.00 3.27
788 807 0.456142 TCGCGTGTCCTTCGAATCTG 60.456 55.000 5.77 0.00 0.00 2.90
798 817 1.874345 TTCTCCTCCTTCGCGTGTCC 61.874 60.000 5.77 0.00 0.00 4.02
813 832 4.083862 AGGCCGCGGTTCCTTCTC 62.084 66.667 28.70 6.82 0.00 2.87
814 833 4.394712 CAGGCCGCGGTTCCTTCT 62.395 66.667 28.70 11.75 0.00 2.85
1149 1188 4.314440 TGGTCGAGCTGGTGGTGC 62.314 66.667 16.64 0.00 0.00 5.01
1272 1314 1.444553 GAAGGAGTCGGAGTGCGTG 60.445 63.158 3.30 0.00 0.00 5.34
1379 1435 5.067153 TCAAATCGCAGACAGGAAAGAAAAA 59.933 36.000 0.00 0.00 42.51 1.94
1380 1436 4.578516 TCAAATCGCAGACAGGAAAGAAAA 59.421 37.500 0.00 0.00 42.51 2.29
1381 1437 4.133820 TCAAATCGCAGACAGGAAAGAAA 58.866 39.130 0.00 0.00 42.51 2.52
1382 1438 3.738982 TCAAATCGCAGACAGGAAAGAA 58.261 40.909 0.00 0.00 42.51 2.52
1383 1439 3.401033 TCAAATCGCAGACAGGAAAGA 57.599 42.857 0.00 0.00 42.51 2.52
1384 1440 4.691860 ATTCAAATCGCAGACAGGAAAG 57.308 40.909 0.00 0.00 42.51 2.62
1385 1441 5.221880 CAAATTCAAATCGCAGACAGGAAA 58.778 37.500 0.00 0.00 42.51 3.13
1386 1442 4.797471 CAAATTCAAATCGCAGACAGGAA 58.203 39.130 0.00 0.00 42.51 3.36
1387 1443 3.366273 GCAAATTCAAATCGCAGACAGGA 60.366 43.478 0.00 0.00 42.51 3.86
1388 1444 2.919229 GCAAATTCAAATCGCAGACAGG 59.081 45.455 0.00 0.00 42.51 4.00
1669 1736 4.862018 TGAACTTTGAAAAGGAAAAGCGTG 59.138 37.500 7.65 0.00 40.31 5.34
1678 1747 9.720667 GGATTTGAAATTTGAACTTTGAAAAGG 57.279 29.630 7.65 0.00 40.31 3.11
1708 1777 3.377253 TCCCAACGGATCTACTGTACT 57.623 47.619 0.00 0.00 37.07 2.73
1709 1778 3.243771 CCATCCCAACGGATCTACTGTAC 60.244 52.174 0.00 0.00 46.77 2.90
1710 1779 2.963101 CCATCCCAACGGATCTACTGTA 59.037 50.000 0.00 0.00 46.77 2.74
1711 1780 1.762957 CCATCCCAACGGATCTACTGT 59.237 52.381 0.00 0.00 46.77 3.55
1712 1781 1.541233 GCCATCCCAACGGATCTACTG 60.541 57.143 0.00 0.00 46.77 2.74
1923 1993 2.756907 TGAATGGAAGGAGAGAGAGGG 58.243 52.381 0.00 0.00 0.00 4.30
1924 1994 4.833478 TTTGAATGGAAGGAGAGAGAGG 57.167 45.455 0.00 0.00 0.00 3.69
1925 1995 7.392673 TGAAATTTTGAATGGAAGGAGAGAGAG 59.607 37.037 0.00 0.00 0.00 3.20
1926 1996 7.233632 TGAAATTTTGAATGGAAGGAGAGAGA 58.766 34.615 0.00 0.00 0.00 3.10
1932 2013 7.743749 TGGATTTGAAATTTTGAATGGAAGGA 58.256 30.769 0.00 0.00 0.00 3.36
2006 2087 7.392113 ACAACCCAATCGAGTTAATTAATGTCA 59.608 33.333 0.31 0.00 0.00 3.58
2008 2089 7.535139 CACAACCCAATCGAGTTAATTAATGT 58.465 34.615 0.31 0.00 0.00 2.71
2009 2090 6.472163 GCACAACCCAATCGAGTTAATTAATG 59.528 38.462 0.31 0.00 0.00 1.90
2609 2705 2.195411 TTCTGCTGTGGCTTGGCA 59.805 55.556 0.00 0.00 39.59 4.92
2656 2752 4.749310 ACGGAGGCTTCTGCTGCG 62.749 66.667 4.24 1.72 39.59 5.18
2657 2753 2.817396 GACGGAGGCTTCTGCTGC 60.817 66.667 4.24 0.00 39.59 5.25
2658 2754 2.507992 CGACGGAGGCTTCTGCTG 60.508 66.667 4.24 0.00 39.59 4.41
2659 2755 4.443266 GCGACGGAGGCTTCTGCT 62.443 66.667 4.24 0.00 39.59 4.24
2660 2756 4.742201 TGCGACGGAGGCTTCTGC 62.742 66.667 4.24 0.59 38.76 4.26
2661 2757 2.290122 ATCTGCGACGGAGGCTTCTG 62.290 60.000 16.74 2.55 35.72 3.02
2753 2849 2.798445 TAGTCTTCTCCCCGGCTGCA 62.798 60.000 0.50 0.00 0.00 4.41
2771 2867 0.615827 TGCTGCTCTGCTCCTCCTTA 60.616 55.000 0.00 0.00 0.00 2.69
2794 2890 1.846124 TTCTTGTCGGCCCCCTTCT 60.846 57.895 0.00 0.00 0.00 2.85
2795 2891 1.674651 GTTCTTGTCGGCCCCCTTC 60.675 63.158 0.00 0.00 0.00 3.46
2796 2892 2.434774 GTTCTTGTCGGCCCCCTT 59.565 61.111 0.00 0.00 0.00 3.95
2800 2896 2.359975 CCTGGTTCTTGTCGGCCC 60.360 66.667 0.00 0.00 0.00 5.80
2824 2920 3.536498 CTCCGGCCGTTGTTGTTGC 62.536 63.158 26.12 0.00 0.00 4.17
2827 2923 3.109592 TTCCTCCGGCCGTTGTTGT 62.110 57.895 26.12 0.00 0.00 3.32
3076 3181 1.064946 GCCGTCGGTCATCAGAGAG 59.935 63.158 13.94 0.00 0.00 3.20
3077 3182 2.761195 CGCCGTCGGTCATCAGAGA 61.761 63.158 13.94 0.00 0.00 3.10
3081 3186 3.822192 CCTCGCCGTCGGTCATCA 61.822 66.667 13.94 0.00 36.13 3.07
3225 3341 3.090037 TCGATCGATCCCTCCCTATTTC 58.910 50.000 19.51 0.00 0.00 2.17
3278 3398 6.494893 AATCAACGAATTAGCAGCAAACTA 57.505 33.333 0.00 0.00 0.00 2.24
3324 3444 5.047802 ACACTCCTGCCAATGTTATTTTGAG 60.048 40.000 0.00 0.00 0.00 3.02
3438 3567 9.736414 ATCAAGAGCAAAGCAACAGATATATAT 57.264 29.630 0.00 0.00 0.00 0.86
3559 3688 6.875726 TGAATATCGATATCCAGAGCAAAAGG 59.124 38.462 18.01 0.00 0.00 3.11
3614 3921 1.413118 AAAGGTTGCCTGAACTTGGG 58.587 50.000 0.00 0.00 32.13 4.12
3645 3957 7.829211 CCTTGGTCTGTAAAAGATTATTGGAGA 59.171 37.037 0.00 0.00 37.23 3.71
3646 3958 7.829211 TCCTTGGTCTGTAAAAGATTATTGGAG 59.171 37.037 0.00 0.00 37.23 3.86
3649 3961 7.121168 TGCTCCTTGGTCTGTAAAAGATTATTG 59.879 37.037 0.00 0.00 37.23 1.90
3650 3962 7.175104 TGCTCCTTGGTCTGTAAAAGATTATT 58.825 34.615 0.00 0.00 37.23 1.40
3651 3963 6.721318 TGCTCCTTGGTCTGTAAAAGATTAT 58.279 36.000 0.00 0.00 37.23 1.28
3652 3964 6.013725 TCTGCTCCTTGGTCTGTAAAAGATTA 60.014 38.462 0.00 0.00 37.23 1.75
3655 3967 3.646162 TCTGCTCCTTGGTCTGTAAAAGA 59.354 43.478 0.00 0.00 0.00 2.52
3656 3968 3.999663 CTCTGCTCCTTGGTCTGTAAAAG 59.000 47.826 0.00 0.00 0.00 2.27
3657 3969 3.807209 GCTCTGCTCCTTGGTCTGTAAAA 60.807 47.826 0.00 0.00 0.00 1.52
3658 3970 2.289694 GCTCTGCTCCTTGGTCTGTAAA 60.290 50.000 0.00 0.00 0.00 2.01
3659 3971 1.276421 GCTCTGCTCCTTGGTCTGTAA 59.724 52.381 0.00 0.00 0.00 2.41
3660 3972 0.898320 GCTCTGCTCCTTGGTCTGTA 59.102 55.000 0.00 0.00 0.00 2.74
3695 4017 9.712359 GGGACAAATAATATGTTCGTTTTAGTC 57.288 33.333 0.00 0.00 0.00 2.59
3696 4018 9.457436 AGGGACAAATAATATGTTCGTTTTAGT 57.543 29.630 0.00 0.00 0.00 2.24
3717 4081 5.703310 TCTTATAAGTAGAGGTGGAGGGAC 58.297 45.833 12.19 0.00 0.00 4.46
3720 4084 7.468906 CGACTTTCTTATAAGTAGAGGTGGAGG 60.469 44.444 12.19 0.00 38.43 4.30
3721 4085 7.419204 CGACTTTCTTATAAGTAGAGGTGGAG 58.581 42.308 12.19 0.00 38.43 3.86
3722 4086 6.320672 CCGACTTTCTTATAAGTAGAGGTGGA 59.679 42.308 12.19 0.00 38.43 4.02
3723 4087 6.505272 CCGACTTTCTTATAAGTAGAGGTGG 58.495 44.000 12.19 10.09 38.43 4.61
3724 4088 5.978322 GCCGACTTTCTTATAAGTAGAGGTG 59.022 44.000 12.19 6.05 38.43 4.00
3725 4089 5.068855 GGCCGACTTTCTTATAAGTAGAGGT 59.931 44.000 12.19 6.56 38.43 3.85
3726 4090 5.068723 TGGCCGACTTTCTTATAAGTAGAGG 59.931 44.000 12.19 16.69 38.43 3.69
3728 4092 6.726490 ATGGCCGACTTTCTTATAAGTAGA 57.274 37.500 12.19 0.00 38.43 2.59
3730 4094 6.880484 TGAATGGCCGACTTTCTTATAAGTA 58.120 36.000 12.19 0.00 38.43 2.24
3732 4096 6.316390 AGTTGAATGGCCGACTTTCTTATAAG 59.684 38.462 6.11 6.11 35.06 1.73
3733 4097 6.093495 CAGTTGAATGGCCGACTTTCTTATAA 59.907 38.462 0.00 0.00 35.06 0.98
3734 4098 5.584649 CAGTTGAATGGCCGACTTTCTTATA 59.415 40.000 0.00 0.00 35.06 0.98
3735 4099 4.396166 CAGTTGAATGGCCGACTTTCTTAT 59.604 41.667 0.00 0.00 35.06 1.73
3745 4109 0.742505 ATGATGCAGTTGAATGGCCG 59.257 50.000 0.00 0.00 0.00 6.13
3775 4146 8.944927 GCTATAAAATTTACGCTGAAACTAAGC 58.055 33.333 0.00 0.00 37.31 3.09
3788 4159 6.416750 GTGGTGATTGGCGCTATAAAATTTAC 59.583 38.462 7.64 4.34 0.00 2.01
3789 4160 6.095580 TGTGGTGATTGGCGCTATAAAATTTA 59.904 34.615 7.64 0.00 0.00 1.40
3830 4201 6.403866 TGTGATCAGGCACATTTAAAAACT 57.596 33.333 0.00 0.00 43.35 2.66
3840 4211 0.888736 CGGGTTTGTGATCAGGCACA 60.889 55.000 0.00 0.00 46.26 4.57
3841 4212 1.586154 CCGGGTTTGTGATCAGGCAC 61.586 60.000 0.00 0.00 39.22 5.01
3842 4213 1.303236 CCGGGTTTGTGATCAGGCA 60.303 57.895 0.00 0.00 0.00 4.75
3843 4214 2.700773 GCCGGGTTTGTGATCAGGC 61.701 63.158 2.18 0.00 36.08 4.85
3889 4260 1.304879 AGAGTGAGCGAGGAGGCTT 60.305 57.895 0.00 0.00 44.93 4.35
3946 4317 1.427809 TGGCGATCAAGATGGAGGAT 58.572 50.000 0.00 0.00 0.00 3.24
4015 4388 1.807573 CCGCTGCTTCGAAGGAGTC 60.808 63.158 36.81 28.96 45.15 3.36
4037 4410 3.704800 TCGAAGAGAGGAGAGTTGAGA 57.295 47.619 0.00 0.00 0.00 3.27


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.