Multiple sequence alignment - TraesCS5B01G329100

Loading Multiple Alignment...

Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G329100 chr5B 100.000 2353 0 0 1 2353 513325058 513322706 0.000000e+00 4346
1 TraesCS5B01G329100 chr5B 85.581 215 21 3 427 632 513324542 513324329 1.420000e-52 217
2 TraesCS5B01G329100 chr5B 85.581 215 21 3 517 730 513324632 513324427 1.420000e-52 217
3 TraesCS5B01G329100 chr5D 87.632 1795 119 49 1 1744 424224664 424222922 0.000000e+00 1989
4 TraesCS5B01G329100 chr5D 86.232 276 23 9 372 632 424224200 424223925 3.830000e-73 285
5 TraesCS5B01G329100 chr5D 85.470 117 9 6 427 535 424224041 424223925 5.310000e-22 115
6 TraesCS5B01G329100 chr5A 90.248 1251 74 23 517 1743 538001400 538000174 0.000000e+00 1591
7 TraesCS5B01G329100 chr5A 90.021 481 38 8 1 473 538001876 538001398 4.300000e-172 614
8 TraesCS5B01G329100 chr5A 86.585 328 30 7 317 632 538001511 538001186 1.340000e-92 350
9 TraesCS5B01G329100 chr5A 93.396 106 7 0 614 719 538001400 538001295 8.710000e-35 158


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G329100 chr5B 513322706 513325058 2352 True 1593.333333 4346 90.387333 1 2353 3 chr5B.!!$R1 2352
1 TraesCS5B01G329100 chr5D 424222922 424224664 1742 True 796.333333 1989 86.444667 1 1744 3 chr5D.!!$R1 1743
2 TraesCS5B01G329100 chr5A 538000174 538001876 1702 True 678.250000 1591 90.062500 1 1743 4 chr5A.!!$R1 1742

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
464 473 0.253044 TACCTACCTACGTGCCGACT 59.747 55.0 0.0 0.0 0.0 4.18 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2215 2293 0.036483 ACACGCTGCCACATCATACA 60.036 50.0 0.0 0.0 0.0 2.29 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
66 69 5.689383 AAGCAGTGAACGAAATTACATGT 57.311 34.783 2.69 2.69 0.00 3.21
97 100 2.863137 TGAAAAACGCAAGCCATTTGAC 59.137 40.909 0.00 0.00 45.62 3.18
154 157 1.446272 GTCTACACGACTGCCTGCC 60.446 63.158 0.00 0.00 39.61 4.85
287 290 1.966451 CCACGAACCCAAGACAGCC 60.966 63.158 0.00 0.00 0.00 4.85
315 318 0.546122 TACTACCTCGGCGGTCCTAA 59.454 55.000 7.21 0.00 44.93 2.69
330 333 1.064758 TCCTAACTACCCGCCGACTAA 60.065 52.381 0.00 0.00 0.00 2.24
345 348 1.587613 CTAACCTGCGCGCTCTCTC 60.588 63.158 33.29 1.73 0.00 3.20
355 358 3.071206 GCTCTCTCGTGCCCTGGA 61.071 66.667 0.00 0.00 0.00 3.86
391 394 4.874977 GACTACCCTGCGCGCTCC 62.875 72.222 33.29 3.49 0.00 4.70
403 412 2.587194 CGCTCCCTCTGGCAATCG 60.587 66.667 0.00 0.00 0.00 3.34
404 413 2.903357 GCTCCCTCTGGCAATCGA 59.097 61.111 0.00 0.00 0.00 3.59
412 421 0.747255 TCTGGCAATCGAGCTCTACC 59.253 55.000 12.85 6.30 34.17 3.18
425 434 3.222121 CTACCCGCCGACTACCCC 61.222 72.222 0.00 0.00 0.00 4.95
464 473 0.253044 TACCTACCTACGTGCCGACT 59.747 55.000 0.00 0.00 0.00 4.18
480 489 4.577246 CTACCCTGCGCGCTCTCC 62.577 72.222 33.29 2.60 0.00 3.71
535 547 1.589630 CGACCATTGTCTCGTGGGA 59.410 57.895 0.00 0.00 39.86 4.37
553 566 2.854187 GAACCTACTGCCTGCCGACC 62.854 65.000 0.00 0.00 0.00 4.79
624 637 1.154225 GCCAAAAGCGACCATCGTG 60.154 57.895 0.00 0.00 42.81 4.35
938 958 1.476652 CCACATCACACAACTCCACCA 60.477 52.381 0.00 0.00 0.00 4.17
943 963 1.070134 TCACACAACTCCACCAGTAGC 59.930 52.381 0.00 0.00 32.30 3.58
1084 1109 6.182634 CGTAAGTGTGTATTATTTTGCTCCG 58.817 40.000 0.00 0.00 0.00 4.63
1085 1110 6.183360 CGTAAGTGTGTATTATTTTGCTCCGT 60.183 38.462 0.00 0.00 0.00 4.69
1086 1111 5.796350 AGTGTGTATTATTTTGCTCCGTC 57.204 39.130 0.00 0.00 0.00 4.79
1087 1112 4.328983 AGTGTGTATTATTTTGCTCCGTCG 59.671 41.667 0.00 0.00 0.00 5.12
1088 1113 4.327898 GTGTGTATTATTTTGCTCCGTCGA 59.672 41.667 0.00 0.00 0.00 4.20
1089 1114 4.327898 TGTGTATTATTTTGCTCCGTCGAC 59.672 41.667 5.18 5.18 0.00 4.20
1090 1115 4.327898 GTGTATTATTTTGCTCCGTCGACA 59.672 41.667 17.16 0.00 0.00 4.35
1091 1116 5.006358 GTGTATTATTTTGCTCCGTCGACAT 59.994 40.000 17.16 1.05 0.00 3.06
1092 1117 5.583061 TGTATTATTTTGCTCCGTCGACATT 59.417 36.000 17.16 0.00 0.00 2.71
1251 1305 4.966787 GGTTCAAGGGGCCGTGCA 62.967 66.667 0.00 0.00 0.00 4.57
1274 1328 0.167908 CCAATAAGAACTGCGCGCAA 59.832 50.000 35.50 19.89 0.00 4.85
1286 1340 3.663176 GCGCAAGTCTGCCAGCAA 61.663 61.111 0.30 0.00 46.56 3.91
1447 1518 0.185901 ACTTGAATGTGTGTGCCCCT 59.814 50.000 0.00 0.00 0.00 4.79
1483 1554 3.379057 TGTCGTATGTATGTCCGTGTCAT 59.621 43.478 0.00 0.00 0.00 3.06
1488 1559 5.277634 CGTATGTATGTCCGTGTCATCACTA 60.278 44.000 0.00 0.00 41.89 2.74
1489 1560 4.632538 TGTATGTCCGTGTCATCACTAG 57.367 45.455 0.00 0.00 41.89 2.57
1490 1561 2.586258 ATGTCCGTGTCATCACTAGC 57.414 50.000 0.00 0.00 41.89 3.42
1491 1562 0.530744 TGTCCGTGTCATCACTAGCC 59.469 55.000 0.00 0.00 41.89 3.93
1524 1595 2.000447 CATCTCGATCGATGCATGCAT 59.000 47.619 32.66 32.66 39.69 3.96
1526 1597 0.442699 CTCGATCGATGCATGCATGG 59.557 55.000 36.73 33.27 36.70 3.66
1527 1598 0.952010 TCGATCGATGCATGCATGGG 60.952 55.000 36.73 26.15 36.70 4.00
1528 1599 1.211969 GATCGATGCATGCATGGGC 59.788 57.895 36.73 24.58 36.70 5.36
1529 1600 2.523184 GATCGATGCATGCATGGGCG 62.523 60.000 36.73 30.50 45.35 6.13
1530 1601 4.337060 CGATGCATGCATGGGCGG 62.337 66.667 36.73 16.20 45.35 6.13
1531 1602 3.986006 GATGCATGCATGGGCGGG 61.986 66.667 36.73 1.69 45.35 6.13
1535 1606 2.519063 CATGCATGGGCGGGCTAA 60.519 61.111 19.40 0.00 45.35 3.09
1536 1607 2.203394 ATGCATGGGCGGGCTAAG 60.203 61.111 0.00 0.00 45.35 2.18
1537 1608 3.797507 ATGCATGGGCGGGCTAAGG 62.798 63.158 0.00 0.00 45.35 2.69
1538 1609 4.506255 GCATGGGCGGGCTAAGGT 62.506 66.667 0.26 0.00 0.00 3.50
1579 1655 2.651137 CGGTTCACGTTCCGTTCCG 61.651 63.158 13.28 9.22 38.32 4.30
1583 1659 3.227667 CACGTTCCGTTCCGTGTC 58.772 61.111 9.09 0.00 46.87 3.67
1586 1662 1.299620 CGTTCCGTTCCGTGTCACT 60.300 57.895 0.65 0.00 0.00 3.41
1589 1665 0.176219 TTCCGTTCCGTGTCACTGTT 59.824 50.000 0.65 0.00 0.00 3.16
1591 1667 1.408340 TCCGTTCCGTGTCACTGTTAA 59.592 47.619 0.65 0.00 0.00 2.01
1592 1668 1.790623 CCGTTCCGTGTCACTGTTAAG 59.209 52.381 0.65 0.00 0.00 1.85
1595 1671 3.307782 CGTTCCGTGTCACTGTTAAGTTT 59.692 43.478 0.65 0.00 32.98 2.66
1596 1672 4.584394 GTTCCGTGTCACTGTTAAGTTTG 58.416 43.478 0.65 0.00 32.98 2.93
1597 1673 2.610374 TCCGTGTCACTGTTAAGTTTGC 59.390 45.455 0.65 0.00 32.98 3.68
1599 1675 3.350912 CGTGTCACTGTTAAGTTTGCAC 58.649 45.455 0.65 0.00 32.98 4.57
1600 1676 3.063452 CGTGTCACTGTTAAGTTTGCACT 59.937 43.478 0.65 0.00 32.98 4.40
1601 1677 4.342772 GTGTCACTGTTAAGTTTGCACTG 58.657 43.478 0.00 0.00 32.98 3.66
1602 1678 4.006989 TGTCACTGTTAAGTTTGCACTGT 58.993 39.130 0.00 0.00 32.98 3.55
1603 1679 4.094294 TGTCACTGTTAAGTTTGCACTGTC 59.906 41.667 0.00 0.00 32.98 3.51
1606 1682 3.687698 ACTGTTAAGTTTGCACTGTCGTT 59.312 39.130 0.00 0.00 30.14 3.85
1607 1683 4.155280 ACTGTTAAGTTTGCACTGTCGTTT 59.845 37.500 0.00 0.00 30.14 3.60
1612 1690 1.131504 GTTTGCACTGTCGTTTGTCCA 59.868 47.619 0.00 0.00 0.00 4.02
1621 1699 1.001597 GTCGTTTGTCCAGTCGTCTCT 60.002 52.381 0.00 0.00 0.00 3.10
1622 1700 1.266175 TCGTTTGTCCAGTCGTCTCTC 59.734 52.381 0.00 0.00 0.00 3.20
1623 1701 1.687628 GTTTGTCCAGTCGTCTCTCG 58.312 55.000 0.00 0.00 41.41 4.04
1624 1702 0.596577 TTTGTCCAGTCGTCTCTCGG 59.403 55.000 0.00 0.00 40.32 4.63
1626 1704 1.235281 TGTCCAGTCGTCTCTCGGTG 61.235 60.000 0.00 0.00 40.32 4.94
1629 1707 0.314302 CCAGTCGTCTCTCGGTGTTT 59.686 55.000 0.00 0.00 40.32 2.83
1644 1722 4.016113 GGTGTTTCCGTTCAGATTATGC 57.984 45.455 0.00 0.00 0.00 3.14
1645 1723 3.689649 GGTGTTTCCGTTCAGATTATGCT 59.310 43.478 0.00 0.00 0.00 3.79
1646 1724 4.156008 GGTGTTTCCGTTCAGATTATGCTT 59.844 41.667 0.00 0.00 0.00 3.91
1647 1725 5.088739 GTGTTTCCGTTCAGATTATGCTTG 58.911 41.667 0.00 0.00 0.00 4.01
1665 1743 0.684535 TGTGGCAAGGTTCATCGAGA 59.315 50.000 0.00 0.00 0.00 4.04
1673 1751 1.443828 GTTCATCGAGAGCTCCCCC 59.556 63.158 10.93 0.00 0.00 5.40
1676 1754 1.456518 CATCGAGAGCTCCCCCTGA 60.457 63.158 10.93 1.64 0.00 3.86
1696 1774 3.118408 TGACAGGCTACCATGTTGGATAC 60.118 47.826 0.00 0.00 40.96 2.24
1702 1780 3.389983 GCTACCATGTTGGATACCACCTA 59.610 47.826 0.00 0.00 40.96 3.08
1717 1795 2.893637 CACCTAGTGGGATGTTCTTCG 58.106 52.381 0.00 0.00 38.76 3.79
1719 1797 3.133003 CACCTAGTGGGATGTTCTTCGAT 59.867 47.826 0.00 0.00 38.76 3.59
1744 1822 2.538737 CGCAGAAGAAAACGCTCACAAA 60.539 45.455 0.00 0.00 0.00 2.83
1745 1823 3.434637 GCAGAAGAAAACGCTCACAAAA 58.565 40.909 0.00 0.00 0.00 2.44
1746 1824 3.240631 GCAGAAGAAAACGCTCACAAAAC 59.759 43.478 0.00 0.00 0.00 2.43
1747 1825 3.478516 CAGAAGAAAACGCTCACAAAACG 59.521 43.478 0.00 0.00 0.00 3.60
1748 1826 3.126343 AGAAGAAAACGCTCACAAAACGT 59.874 39.130 0.00 0.00 42.81 3.99
1749 1827 4.330620 AGAAGAAAACGCTCACAAAACGTA 59.669 37.500 0.00 0.00 39.49 3.57
1750 1828 3.931824 AGAAAACGCTCACAAAACGTAC 58.068 40.909 0.00 0.00 39.49 3.67
1751 1829 2.356386 AAACGCTCACAAAACGTACG 57.644 45.000 15.01 15.01 39.49 3.67
1752 1830 0.042794 AACGCTCACAAAACGTACGC 60.043 50.000 16.72 0.00 39.49 4.42
1753 1831 1.146957 ACGCTCACAAAACGTACGCA 61.147 50.000 16.72 0.00 38.45 5.24
1754 1832 0.716926 CGCTCACAAAACGTACGCAC 60.717 55.000 16.72 0.00 0.00 5.34
1773 1851 3.004024 ACGCATGTGAGCTTCAAAAAG 57.996 42.857 14.43 0.00 35.47 2.27
1774 1852 2.618241 ACGCATGTGAGCTTCAAAAAGA 59.382 40.909 14.43 0.00 34.14 2.52
1775 1853 3.066621 ACGCATGTGAGCTTCAAAAAGAA 59.933 39.130 14.43 0.00 34.14 2.52
1776 1854 4.232221 CGCATGTGAGCTTCAAAAAGAAT 58.768 39.130 0.00 0.00 35.25 2.40
1777 1855 4.682860 CGCATGTGAGCTTCAAAAAGAATT 59.317 37.500 0.00 0.00 35.25 2.17
1778 1856 5.176223 CGCATGTGAGCTTCAAAAAGAATTT 59.824 36.000 0.00 0.00 42.41 1.82
1794 1872 7.548196 AAAGAATTTTACAGACACACTTCGA 57.452 32.000 0.00 0.00 31.62 3.71
1795 1873 7.548196 AAGAATTTTACAGACACACTTCGAA 57.452 32.000 0.00 0.00 0.00 3.71
1796 1874 7.178712 AGAATTTTACAGACACACTTCGAAG 57.821 36.000 23.43 23.43 0.00 3.79
1797 1875 6.761714 AGAATTTTACAGACACACTTCGAAGT 59.238 34.615 24.93 24.93 40.60 3.01
1798 1876 5.961395 TTTTACAGACACACTTCGAAGTC 57.039 39.130 27.54 16.48 37.08 3.01
1799 1877 2.510768 ACAGACACACTTCGAAGTCC 57.489 50.000 27.54 16.09 37.08 3.85
1800 1878 1.068741 ACAGACACACTTCGAAGTCCC 59.931 52.381 27.54 15.77 37.08 4.46
1801 1879 1.341531 CAGACACACTTCGAAGTCCCT 59.658 52.381 27.54 17.56 37.08 4.20
1802 1880 2.557056 CAGACACACTTCGAAGTCCCTA 59.443 50.000 27.54 0.00 37.08 3.53
1803 1881 3.193691 CAGACACACTTCGAAGTCCCTAT 59.806 47.826 27.54 11.72 37.08 2.57
1804 1882 3.833070 AGACACACTTCGAAGTCCCTATT 59.167 43.478 27.54 9.17 37.08 1.73
1805 1883 5.014858 AGACACACTTCGAAGTCCCTATTA 58.985 41.667 27.54 0.00 37.08 0.98
1806 1884 5.125739 AGACACACTTCGAAGTCCCTATTAG 59.874 44.000 27.54 15.88 37.08 1.73
1807 1885 5.014858 ACACACTTCGAAGTCCCTATTAGA 58.985 41.667 27.54 0.00 37.08 2.10
1808 1886 5.105837 ACACACTTCGAAGTCCCTATTAGAC 60.106 44.000 27.54 0.00 37.08 2.59
1809 1887 5.014858 ACACTTCGAAGTCCCTATTAGACA 58.985 41.667 27.54 0.00 37.08 3.41
1810 1888 5.105837 ACACTTCGAAGTCCCTATTAGACAC 60.106 44.000 27.54 0.00 37.08 3.67
1811 1889 4.401837 ACTTCGAAGTCCCTATTAGACACC 59.598 45.833 24.93 0.00 36.68 4.16
1812 1890 4.246712 TCGAAGTCCCTATTAGACACCT 57.753 45.455 0.00 0.00 36.68 4.00
1813 1891 4.205587 TCGAAGTCCCTATTAGACACCTC 58.794 47.826 0.00 0.00 36.68 3.85
1814 1892 3.003482 CGAAGTCCCTATTAGACACCTCG 59.997 52.174 0.00 0.00 36.68 4.63
1815 1893 3.666345 AGTCCCTATTAGACACCTCGT 57.334 47.619 0.00 0.00 36.68 4.18
1816 1894 4.785346 AGTCCCTATTAGACACCTCGTA 57.215 45.455 0.00 0.00 36.68 3.43
1817 1895 5.321934 AGTCCCTATTAGACACCTCGTAT 57.678 43.478 0.00 0.00 36.68 3.06
1818 1896 5.703310 AGTCCCTATTAGACACCTCGTATT 58.297 41.667 0.00 0.00 36.68 1.89
1819 1897 6.845908 AGTCCCTATTAGACACCTCGTATTA 58.154 40.000 0.00 0.00 36.68 0.98
1820 1898 7.468496 AGTCCCTATTAGACACCTCGTATTAT 58.532 38.462 0.00 0.00 36.68 1.28
1821 1899 7.949006 AGTCCCTATTAGACACCTCGTATTATT 59.051 37.037 0.00 0.00 36.68 1.40
1822 1900 9.236006 GTCCCTATTAGACACCTCGTATTATTA 57.764 37.037 0.00 0.00 34.27 0.98
1823 1901 9.986157 TCCCTATTAGACACCTCGTATTATTAT 57.014 33.333 0.00 0.00 0.00 1.28
1849 1927 8.514330 TTTTTGAGTTGTAGACACCTTGTATT 57.486 30.769 0.00 0.00 0.00 1.89
1850 1928 7.724305 TTTGAGTTGTAGACACCTTGTATTC 57.276 36.000 0.00 0.00 0.00 1.75
1851 1929 5.466819 TGAGTTGTAGACACCTTGTATTCG 58.533 41.667 0.00 0.00 0.00 3.34
1852 1930 5.242171 TGAGTTGTAGACACCTTGTATTCGA 59.758 40.000 0.00 0.00 0.00 3.71
1853 1931 5.467705 AGTTGTAGACACCTTGTATTCGAC 58.532 41.667 0.00 0.00 0.00 4.20
1854 1932 4.087510 TGTAGACACCTTGTATTCGACG 57.912 45.455 0.00 0.00 0.00 5.12
1855 1933 2.649331 AGACACCTTGTATTCGACGG 57.351 50.000 0.00 0.00 0.00 4.79
1856 1934 2.165167 AGACACCTTGTATTCGACGGA 58.835 47.619 0.00 0.00 0.00 4.69
1857 1935 2.094854 AGACACCTTGTATTCGACGGAC 60.095 50.000 0.00 0.00 0.00 4.79
1858 1936 1.265568 CACCTTGTATTCGACGGACG 58.734 55.000 0.00 0.00 44.09 4.79
1859 1937 0.883833 ACCTTGTATTCGACGGACGT 59.116 50.000 0.00 0.00 43.13 4.34
1860 1938 2.083774 ACCTTGTATTCGACGGACGTA 58.916 47.619 0.00 0.00 43.13 3.57
1861 1939 2.684881 ACCTTGTATTCGACGGACGTAT 59.315 45.455 0.00 0.00 43.13 3.06
1862 1940 3.129287 ACCTTGTATTCGACGGACGTATT 59.871 43.478 0.00 0.00 43.13 1.89
1863 1941 4.335315 ACCTTGTATTCGACGGACGTATTA 59.665 41.667 0.00 0.00 43.13 0.98
1864 1942 5.009010 ACCTTGTATTCGACGGACGTATTAT 59.991 40.000 0.00 0.00 43.13 1.28
1865 1943 6.204688 ACCTTGTATTCGACGGACGTATTATA 59.795 38.462 0.00 0.00 43.13 0.98
1866 1944 6.521133 CCTTGTATTCGACGGACGTATTATAC 59.479 42.308 0.00 6.56 43.13 1.47
1867 1945 6.538189 TGTATTCGACGGACGTATTATACA 57.462 37.500 15.27 15.27 43.13 2.29
1868 1946 6.362686 TGTATTCGACGGACGTATTATACAC 58.637 40.000 15.27 0.00 43.13 2.90
1869 1947 4.873768 TTCGACGGACGTATTATACACA 57.126 40.909 0.00 0.00 43.13 3.72
1870 1948 5.422666 TTCGACGGACGTATTATACACAT 57.577 39.130 0.00 0.00 43.13 3.21
1871 1949 4.775664 TCGACGGACGTATTATACACATG 58.224 43.478 0.00 0.00 43.13 3.21
1872 1950 4.511082 TCGACGGACGTATTATACACATGA 59.489 41.667 0.00 0.00 43.13 3.07
1873 1951 4.844522 CGACGGACGTATTATACACATGAG 59.155 45.833 0.00 0.00 37.22 2.90
1874 1952 4.543692 ACGGACGTATTATACACATGAGC 58.456 43.478 0.00 0.00 0.00 4.26
1875 1953 3.602489 CGGACGTATTATACACATGAGCG 59.398 47.826 0.00 0.00 0.00 5.03
1876 1954 4.612033 CGGACGTATTATACACATGAGCGA 60.612 45.833 0.00 0.00 0.00 4.93
1877 1955 5.217393 GGACGTATTATACACATGAGCGAA 58.783 41.667 0.00 0.00 0.00 4.70
1878 1956 5.342525 GGACGTATTATACACATGAGCGAAG 59.657 44.000 0.00 0.00 0.00 3.79
1879 1957 5.828747 ACGTATTATACACATGAGCGAAGT 58.171 37.500 0.00 0.00 0.00 3.01
1880 1958 5.913514 ACGTATTATACACATGAGCGAAGTC 59.086 40.000 0.00 0.00 0.00 3.01
1881 1959 5.912955 CGTATTATACACATGAGCGAAGTCA 59.087 40.000 0.00 0.00 0.00 3.41
1882 1960 6.582672 CGTATTATACACATGAGCGAAGTCAT 59.417 38.462 0.00 0.00 37.68 3.06
1883 1961 7.114953 CGTATTATACACATGAGCGAAGTCATT 59.885 37.037 0.00 0.00 34.81 2.57
1884 1962 6.828502 TTATACACATGAGCGAAGTCATTC 57.171 37.500 0.00 0.00 34.81 2.67
1885 1963 3.325293 ACACATGAGCGAAGTCATTCT 57.675 42.857 0.00 0.00 34.81 2.40
1886 1964 3.668447 ACACATGAGCGAAGTCATTCTT 58.332 40.909 0.00 0.00 34.81 2.52
1887 1965 4.820897 ACACATGAGCGAAGTCATTCTTA 58.179 39.130 0.00 0.00 34.81 2.10
1888 1966 4.867047 ACACATGAGCGAAGTCATTCTTAG 59.133 41.667 0.00 0.00 34.81 2.18
1889 1967 4.269603 CACATGAGCGAAGTCATTCTTAGG 59.730 45.833 0.00 0.00 34.81 2.69
1890 1968 4.081420 ACATGAGCGAAGTCATTCTTAGGT 60.081 41.667 0.00 0.00 40.90 3.08
1891 1969 5.127194 ACATGAGCGAAGTCATTCTTAGGTA 59.873 40.000 0.00 0.00 39.00 3.08
1892 1970 5.854010 TGAGCGAAGTCATTCTTAGGTAT 57.146 39.130 0.00 0.00 39.00 2.73
1893 1971 6.954487 TGAGCGAAGTCATTCTTAGGTATA 57.046 37.500 0.00 0.00 39.00 1.47
1894 1972 6.736123 TGAGCGAAGTCATTCTTAGGTATAC 58.264 40.000 0.00 0.00 39.00 1.47
1895 1973 5.759963 AGCGAAGTCATTCTTAGGTATACG 58.240 41.667 0.00 0.00 37.63 3.06
1896 1974 5.530171 AGCGAAGTCATTCTTAGGTATACGA 59.470 40.000 0.00 0.00 37.63 3.43
1897 1975 5.852229 GCGAAGTCATTCTTAGGTATACGAG 59.148 44.000 0.00 0.00 36.40 4.18
1898 1976 6.293298 GCGAAGTCATTCTTAGGTATACGAGA 60.293 42.308 0.00 0.00 36.40 4.04
1899 1977 7.070798 CGAAGTCATTCTTAGGTATACGAGAC 58.929 42.308 0.00 0.00 36.40 3.36
1900 1978 6.880942 AGTCATTCTTAGGTATACGAGACC 57.119 41.667 0.00 0.00 37.22 3.85
1901 1979 7.229106 GAAGTCATTCTTAGGTATACGAGACCT 59.771 40.741 11.40 11.40 40.23 3.85
1902 1980 6.711645 AGTCATTCTTAGGTATACGAGACCTC 59.288 42.308 10.25 0.00 44.33 3.85
1903 1981 6.485984 GTCATTCTTAGGTATACGAGACCTCA 59.514 42.308 10.25 1.10 44.33 3.86
1904 1982 7.175293 GTCATTCTTAGGTATACGAGACCTCAT 59.825 40.741 10.25 0.00 44.33 2.90
1905 1983 8.380867 TCATTCTTAGGTATACGAGACCTCATA 58.619 37.037 10.25 0.00 44.33 2.15
1906 1984 9.011095 CATTCTTAGGTATACGAGACCTCATAA 57.989 37.037 10.25 5.25 44.33 1.90
1907 1985 7.976135 TCTTAGGTATACGAGACCTCATAAC 57.024 40.000 10.25 0.00 44.33 1.89
1908 1986 7.512130 TCTTAGGTATACGAGACCTCATAACA 58.488 38.462 10.25 0.00 44.33 2.41
1909 1987 7.994911 TCTTAGGTATACGAGACCTCATAACAA 59.005 37.037 10.25 0.24 44.33 2.83
1910 1988 8.523915 TTAGGTATACGAGACCTCATAACAAA 57.476 34.615 10.25 0.00 44.33 2.83
1911 1989 7.040473 AGGTATACGAGACCTCATAACAAAG 57.960 40.000 0.00 0.00 44.33 2.77
1912 1990 5.690857 GGTATACGAGACCTCATAACAAAGC 59.309 44.000 0.00 0.00 33.86 3.51
1913 1991 2.973945 ACGAGACCTCATAACAAAGCC 58.026 47.619 0.00 0.00 0.00 4.35
1914 1992 2.567615 ACGAGACCTCATAACAAAGCCT 59.432 45.455 0.00 0.00 0.00 4.58
1915 1993 2.932614 CGAGACCTCATAACAAAGCCTG 59.067 50.000 0.00 0.00 0.00 4.85
1916 1994 3.368427 CGAGACCTCATAACAAAGCCTGA 60.368 47.826 0.00 0.00 0.00 3.86
1917 1995 4.579869 GAGACCTCATAACAAAGCCTGAA 58.420 43.478 0.00 0.00 0.00 3.02
1918 1996 4.985538 AGACCTCATAACAAAGCCTGAAA 58.014 39.130 0.00 0.00 0.00 2.69
1919 1997 5.574188 AGACCTCATAACAAAGCCTGAAAT 58.426 37.500 0.00 0.00 0.00 2.17
1920 1998 6.721318 AGACCTCATAACAAAGCCTGAAATA 58.279 36.000 0.00 0.00 0.00 1.40
1921 1999 7.175104 AGACCTCATAACAAAGCCTGAAATAA 58.825 34.615 0.00 0.00 0.00 1.40
1922 2000 7.669722 AGACCTCATAACAAAGCCTGAAATAAA 59.330 33.333 0.00 0.00 0.00 1.40
1923 2001 7.602753 ACCTCATAACAAAGCCTGAAATAAAC 58.397 34.615 0.00 0.00 0.00 2.01
1924 2002 7.035612 CCTCATAACAAAGCCTGAAATAAACC 58.964 38.462 0.00 0.00 0.00 3.27
1925 2003 7.309744 CCTCATAACAAAGCCTGAAATAAACCA 60.310 37.037 0.00 0.00 0.00 3.67
1926 2004 7.957002 TCATAACAAAGCCTGAAATAAACCAA 58.043 30.769 0.00 0.00 0.00 3.67
1927 2005 8.087750 TCATAACAAAGCCTGAAATAAACCAAG 58.912 33.333 0.00 0.00 0.00 3.61
1928 2006 4.631131 ACAAAGCCTGAAATAAACCAAGC 58.369 39.130 0.00 0.00 0.00 4.01
1929 2007 4.344968 ACAAAGCCTGAAATAAACCAAGCT 59.655 37.500 0.00 0.00 31.97 3.74
1930 2008 5.538433 ACAAAGCCTGAAATAAACCAAGCTA 59.462 36.000 0.00 0.00 30.61 3.32
1931 2009 6.041523 ACAAAGCCTGAAATAAACCAAGCTAA 59.958 34.615 0.00 0.00 30.61 3.09
1932 2010 6.857437 AAGCCTGAAATAAACCAAGCTAAT 57.143 33.333 0.00 0.00 30.61 1.73
1933 2011 7.954666 AAGCCTGAAATAAACCAAGCTAATA 57.045 32.000 0.00 0.00 30.61 0.98
1934 2012 7.334844 AGCCTGAAATAAACCAAGCTAATAC 57.665 36.000 0.00 0.00 29.15 1.89
1935 2013 6.038271 AGCCTGAAATAAACCAAGCTAATACG 59.962 38.462 0.00 0.00 29.15 3.06
1936 2014 6.037830 GCCTGAAATAAACCAAGCTAATACGA 59.962 38.462 0.00 0.00 0.00 3.43
1937 2015 7.255139 GCCTGAAATAAACCAAGCTAATACGAT 60.255 37.037 0.00 0.00 0.00 3.73
1938 2016 9.268268 CCTGAAATAAACCAAGCTAATACGATA 57.732 33.333 0.00 0.00 0.00 2.92
1946 2024 9.477484 AAACCAAGCTAATACGATAACTAGATG 57.523 33.333 0.00 0.00 0.00 2.90
1947 2025 8.405418 ACCAAGCTAATACGATAACTAGATGA 57.595 34.615 0.00 0.00 0.00 2.92
1948 2026 8.857098 ACCAAGCTAATACGATAACTAGATGAA 58.143 33.333 0.00 0.00 0.00 2.57
1949 2027 9.347934 CCAAGCTAATACGATAACTAGATGAAG 57.652 37.037 0.00 0.00 0.00 3.02
1950 2028 8.855279 CAAGCTAATACGATAACTAGATGAAGC 58.145 37.037 0.00 0.00 0.00 3.86
1951 2029 7.540299 AGCTAATACGATAACTAGATGAAGCC 58.460 38.462 0.00 0.00 0.00 4.35
1952 2030 6.752815 GCTAATACGATAACTAGATGAAGCCC 59.247 42.308 0.00 0.00 0.00 5.19
1953 2031 6.665992 AATACGATAACTAGATGAAGCCCA 57.334 37.500 0.00 0.00 0.00 5.36
1954 2032 4.592485 ACGATAACTAGATGAAGCCCAG 57.408 45.455 0.00 0.00 0.00 4.45
1955 2033 3.243907 ACGATAACTAGATGAAGCCCAGC 60.244 47.826 0.00 0.00 0.00 4.85
1956 2034 2.890808 TAACTAGATGAAGCCCAGCG 57.109 50.000 0.00 0.00 36.05 5.18
1957 2035 0.462759 AACTAGATGAAGCCCAGCGC 60.463 55.000 0.00 0.00 36.05 5.92
1958 2036 1.953138 CTAGATGAAGCCCAGCGCG 60.953 63.158 0.00 0.00 44.76 6.86
1959 2037 2.635229 CTAGATGAAGCCCAGCGCGT 62.635 60.000 8.43 0.00 44.76 6.01
1960 2038 2.238847 TAGATGAAGCCCAGCGCGTT 62.239 55.000 8.43 0.00 44.76 4.84
1961 2039 3.386867 GATGAAGCCCAGCGCGTTG 62.387 63.158 16.72 16.72 44.76 4.10
1971 2049 4.651317 GCGCGTTGCTTATCACTG 57.349 55.556 8.43 0.00 41.73 3.66
1972 2050 1.787847 GCGCGTTGCTTATCACTGT 59.212 52.632 8.43 0.00 41.73 3.55
1973 2051 0.165944 GCGCGTTGCTTATCACTGTT 59.834 50.000 8.43 0.00 41.73 3.16
1974 2052 1.399727 GCGCGTTGCTTATCACTGTTT 60.400 47.619 8.43 0.00 41.73 2.83
1975 2053 2.159761 GCGCGTTGCTTATCACTGTTTA 60.160 45.455 8.43 0.00 41.73 2.01
1976 2054 3.665848 GCGCGTTGCTTATCACTGTTTAA 60.666 43.478 8.43 0.00 41.73 1.52
1977 2055 4.459606 CGCGTTGCTTATCACTGTTTAAA 58.540 39.130 0.00 0.00 0.00 1.52
1978 2056 4.907010 CGCGTTGCTTATCACTGTTTAAAA 59.093 37.500 0.00 0.00 0.00 1.52
1979 2057 5.396947 CGCGTTGCTTATCACTGTTTAAAAA 59.603 36.000 0.00 0.00 0.00 1.94
1980 2058 6.087555 CGCGTTGCTTATCACTGTTTAAAAAT 59.912 34.615 0.00 0.00 0.00 1.82
1981 2059 7.269511 CGCGTTGCTTATCACTGTTTAAAAATA 59.730 33.333 0.00 0.00 0.00 1.40
1982 2060 8.363029 GCGTTGCTTATCACTGTTTAAAAATAC 58.637 33.333 0.00 0.00 0.00 1.89
1983 2061 9.388346 CGTTGCTTATCACTGTTTAAAAATACA 57.612 29.630 0.00 0.00 0.00 2.29
2034 2112 9.739276 TCTATTGGAAAGAAAATAGAAGCTTGA 57.261 29.630 2.10 0.00 40.64 3.02
2046 2124 9.933723 AAAATAGAAGCTTGAATAAATTGCTGT 57.066 25.926 2.10 0.00 33.96 4.40
2047 2125 9.933723 AAATAGAAGCTTGAATAAATTGCTGTT 57.066 25.926 2.10 0.00 33.96 3.16
2048 2126 9.933723 AATAGAAGCTTGAATAAATTGCTGTTT 57.066 25.926 2.10 0.00 33.96 2.83
2051 2129 9.762933 AGAAGCTTGAATAAATTGCTGTTTAAA 57.237 25.926 2.10 0.00 33.96 1.52
2185 2263 9.709495 TCATTTCAAACAAAAATAGGAAGGATG 57.291 29.630 0.00 0.00 0.00 3.51
2186 2264 8.938906 CATTTCAAACAAAAATAGGAAGGATGG 58.061 33.333 0.00 0.00 0.00 3.51
2187 2265 6.036577 TCAAACAAAAATAGGAAGGATGGC 57.963 37.500 0.00 0.00 0.00 4.40
2188 2266 5.779771 TCAAACAAAAATAGGAAGGATGGCT 59.220 36.000 0.00 0.00 0.00 4.75
2189 2267 5.665916 AACAAAAATAGGAAGGATGGCTG 57.334 39.130 0.00 0.00 0.00 4.85
2190 2268 4.934356 ACAAAAATAGGAAGGATGGCTGA 58.066 39.130 0.00 0.00 0.00 4.26
2191 2269 4.706962 ACAAAAATAGGAAGGATGGCTGAC 59.293 41.667 0.00 0.00 0.00 3.51
2192 2270 4.591321 AAAATAGGAAGGATGGCTGACA 57.409 40.909 0.00 0.00 0.00 3.58
2193 2271 4.803329 AAATAGGAAGGATGGCTGACAT 57.197 40.909 0.00 0.00 44.18 3.06
2194 2272 3.784511 ATAGGAAGGATGGCTGACATG 57.215 47.619 0.00 0.00 40.72 3.21
2199 2277 2.803203 GGATGGCTGACATGCATGT 58.197 52.632 31.82 31.82 46.14 3.21
2200 2278 1.971481 GGATGGCTGACATGCATGTA 58.029 50.000 31.45 16.64 46.14 2.29
2201 2279 2.511659 GGATGGCTGACATGCATGTAT 58.488 47.619 31.45 20.62 46.14 2.29
2202 2280 2.228103 GGATGGCTGACATGCATGTATG 59.772 50.000 31.45 25.17 46.14 2.39
2203 2281 2.713863 TGGCTGACATGCATGTATGA 57.286 45.000 31.45 17.20 41.95 2.15
2204 2282 3.217681 TGGCTGACATGCATGTATGAT 57.782 42.857 31.45 9.56 41.95 2.45
2205 2283 2.882137 TGGCTGACATGCATGTATGATG 59.118 45.455 31.45 19.08 41.95 3.07
2206 2284 2.882761 GGCTGACATGCATGTATGATGT 59.117 45.455 31.45 9.66 41.95 3.06
2207 2285 4.067192 GGCTGACATGCATGTATGATGTA 58.933 43.478 31.45 11.29 41.95 2.29
2208 2286 4.516321 GGCTGACATGCATGTATGATGTAA 59.484 41.667 31.45 9.44 41.95 2.41
2209 2287 5.446709 GCTGACATGCATGTATGATGTAAC 58.553 41.667 31.45 16.12 41.95 2.50
2210 2288 5.007921 GCTGACATGCATGTATGATGTAACA 59.992 40.000 31.45 19.54 41.95 2.41
2211 2289 6.293790 GCTGACATGCATGTATGATGTAACAT 60.294 38.462 31.45 4.73 41.95 2.71
2221 2299 8.851541 ATGTATGATGTAACATGCATGTATGA 57.148 30.769 31.55 16.69 46.13 2.15
2222 2300 8.851541 TGTATGATGTAACATGCATGTATGAT 57.148 30.769 31.55 21.80 40.80 2.45
2223 2301 8.723311 TGTATGATGTAACATGCATGTATGATG 58.277 33.333 31.55 6.19 40.80 3.07
2224 2302 7.754851 ATGATGTAACATGCATGTATGATGT 57.245 32.000 31.55 17.63 40.80 3.06
2225 2303 6.961576 TGATGTAACATGCATGTATGATGTG 58.038 36.000 31.55 4.56 40.80 3.21
2226 2304 5.754543 TGTAACATGCATGTATGATGTGG 57.245 39.130 31.55 2.09 40.80 4.17
2227 2305 3.720949 AACATGCATGTATGATGTGGC 57.279 42.857 31.55 0.00 40.80 5.01
2228 2306 2.657143 ACATGCATGTATGATGTGGCA 58.343 42.857 30.50 0.00 39.68 4.92
2229 2307 2.621526 ACATGCATGTATGATGTGGCAG 59.378 45.455 30.50 0.00 39.68 4.85
2230 2308 1.026584 TGCATGTATGATGTGGCAGC 58.973 50.000 0.00 0.00 0.00 5.25
2231 2309 0.040692 GCATGTATGATGTGGCAGCG 60.041 55.000 0.00 0.00 0.00 5.18
2232 2310 1.302366 CATGTATGATGTGGCAGCGT 58.698 50.000 0.00 0.00 0.00 5.07
2233 2311 1.003223 CATGTATGATGTGGCAGCGTG 60.003 52.381 0.00 0.00 0.00 5.34
2234 2312 0.036483 TGTATGATGTGGCAGCGTGT 60.036 50.000 0.00 0.00 0.00 4.49
2235 2313 1.086696 GTATGATGTGGCAGCGTGTT 58.913 50.000 0.00 0.00 0.00 3.32
2236 2314 2.276201 GTATGATGTGGCAGCGTGTTA 58.724 47.619 0.00 0.00 0.00 2.41
2237 2315 2.042686 ATGATGTGGCAGCGTGTTAT 57.957 45.000 0.00 0.00 0.00 1.89
2238 2316 1.819928 TGATGTGGCAGCGTGTTATT 58.180 45.000 0.00 0.00 0.00 1.40
2239 2317 1.737236 TGATGTGGCAGCGTGTTATTC 59.263 47.619 0.00 0.00 0.00 1.75
2240 2318 1.737236 GATGTGGCAGCGTGTTATTCA 59.263 47.619 0.00 0.00 0.00 2.57
2241 2319 1.819928 TGTGGCAGCGTGTTATTCAT 58.180 45.000 0.00 0.00 0.00 2.57
2242 2320 2.979240 TGTGGCAGCGTGTTATTCATA 58.021 42.857 0.00 0.00 0.00 2.15
2243 2321 2.935849 TGTGGCAGCGTGTTATTCATAG 59.064 45.455 0.00 0.00 0.00 2.23
2244 2322 3.194861 GTGGCAGCGTGTTATTCATAGA 58.805 45.455 0.00 0.00 0.00 1.98
2245 2323 3.809832 GTGGCAGCGTGTTATTCATAGAT 59.190 43.478 0.00 0.00 0.00 1.98
2246 2324 4.273480 GTGGCAGCGTGTTATTCATAGATT 59.727 41.667 0.00 0.00 0.00 2.40
2247 2325 5.465390 GTGGCAGCGTGTTATTCATAGATTA 59.535 40.000 0.00 0.00 0.00 1.75
2248 2326 6.018262 GTGGCAGCGTGTTATTCATAGATTAA 60.018 38.462 0.00 0.00 0.00 1.40
2249 2327 6.710295 TGGCAGCGTGTTATTCATAGATTAAT 59.290 34.615 0.00 0.00 0.00 1.40
2250 2328 7.875554 TGGCAGCGTGTTATTCATAGATTAATA 59.124 33.333 0.00 0.00 0.00 0.98
2251 2329 8.717821 GGCAGCGTGTTATTCATAGATTAATAA 58.282 33.333 0.00 0.00 0.00 1.40
2279 2357 9.573166 AATTATTATACTTGCTTATGTGGCAGA 57.427 29.630 0.00 0.00 40.90 4.26
2280 2358 6.867662 ATTATACTTGCTTATGTGGCAGAC 57.132 37.500 0.00 0.00 40.90 3.51
2281 2359 2.867109 ACTTGCTTATGTGGCAGACT 57.133 45.000 0.00 0.00 40.90 3.24
2282 2360 3.981071 ACTTGCTTATGTGGCAGACTA 57.019 42.857 0.00 0.00 40.90 2.59
2283 2361 4.286297 ACTTGCTTATGTGGCAGACTAA 57.714 40.909 0.00 0.00 40.90 2.24
2284 2362 4.651778 ACTTGCTTATGTGGCAGACTAAA 58.348 39.130 0.00 0.00 40.90 1.85
2285 2363 5.256474 ACTTGCTTATGTGGCAGACTAAAT 58.744 37.500 0.00 0.00 40.90 1.40
2286 2364 5.124457 ACTTGCTTATGTGGCAGACTAAATG 59.876 40.000 0.00 0.00 40.90 2.32
2287 2365 4.842574 TGCTTATGTGGCAGACTAAATGA 58.157 39.130 0.00 0.00 34.56 2.57
2288 2366 5.252547 TGCTTATGTGGCAGACTAAATGAA 58.747 37.500 0.00 0.00 34.56 2.57
2289 2367 5.887598 TGCTTATGTGGCAGACTAAATGAAT 59.112 36.000 0.00 0.00 34.56 2.57
2290 2368 6.377996 TGCTTATGTGGCAGACTAAATGAATT 59.622 34.615 0.00 0.00 34.56 2.17
2291 2369 6.694411 GCTTATGTGGCAGACTAAATGAATTG 59.306 38.462 0.00 0.00 0.00 2.32
2292 2370 4.439305 TGTGGCAGACTAAATGAATTGC 57.561 40.909 0.00 0.00 0.00 3.56
2293 2371 4.081406 TGTGGCAGACTAAATGAATTGCT 58.919 39.130 0.00 0.00 0.00 3.91
2294 2372 4.523943 TGTGGCAGACTAAATGAATTGCTT 59.476 37.500 0.00 0.00 0.00 3.91
2295 2373 5.709631 TGTGGCAGACTAAATGAATTGCTTA 59.290 36.000 0.00 0.00 0.00 3.09
2296 2374 6.127925 TGTGGCAGACTAAATGAATTGCTTAG 60.128 38.462 0.00 0.00 0.00 2.18
2297 2375 5.945784 TGGCAGACTAAATGAATTGCTTAGT 59.054 36.000 4.05 4.05 38.32 2.24
2298 2376 6.127925 TGGCAGACTAAATGAATTGCTTAGTG 60.128 38.462 7.73 0.00 36.30 2.74
2299 2377 6.094048 GGCAGACTAAATGAATTGCTTAGTGA 59.906 38.462 7.73 0.00 36.30 3.41
2300 2378 7.362056 GGCAGACTAAATGAATTGCTTAGTGAA 60.362 37.037 7.73 0.00 36.30 3.18
2301 2379 7.695618 GCAGACTAAATGAATTGCTTAGTGAAG 59.304 37.037 7.73 0.00 36.30 3.02
2302 2380 8.939929 CAGACTAAATGAATTGCTTAGTGAAGA 58.060 33.333 7.73 0.00 36.30 2.87
2303 2381 9.160496 AGACTAAATGAATTGCTTAGTGAAGAG 57.840 33.333 7.73 0.00 36.30 2.85
2304 2382 9.155975 GACTAAATGAATTGCTTAGTGAAGAGA 57.844 33.333 7.73 0.00 36.30 3.10
2305 2383 9.507329 ACTAAATGAATTGCTTAGTGAAGAGAA 57.493 29.630 3.71 0.00 35.17 2.87
2306 2384 9.985318 CTAAATGAATTGCTTAGTGAAGAGAAG 57.015 33.333 0.00 0.00 34.25 2.85
2307 2385 8.627208 AAATGAATTGCTTAGTGAAGAGAAGA 57.373 30.769 0.00 0.00 34.25 2.87
2308 2386 7.608308 ATGAATTGCTTAGTGAAGAGAAGAC 57.392 36.000 0.00 0.00 34.25 3.01
2309 2387 6.763355 TGAATTGCTTAGTGAAGAGAAGACT 58.237 36.000 0.00 0.00 34.25 3.24
2310 2388 7.220030 TGAATTGCTTAGTGAAGAGAAGACTT 58.780 34.615 0.00 0.00 34.25 3.01
2311 2389 8.367911 TGAATTGCTTAGTGAAGAGAAGACTTA 58.632 33.333 0.00 0.00 34.25 2.24
2312 2390 9.209175 GAATTGCTTAGTGAAGAGAAGACTTAA 57.791 33.333 0.00 0.00 34.25 1.85
2313 2391 9.561069 AATTGCTTAGTGAAGAGAAGACTTAAA 57.439 29.630 0.00 0.00 34.25 1.52
2314 2392 9.732130 ATTGCTTAGTGAAGAGAAGACTTAAAT 57.268 29.630 0.00 0.00 34.25 1.40
2315 2393 8.539770 TGCTTAGTGAAGAGAAGACTTAAATG 57.460 34.615 0.00 0.00 34.25 2.32
2316 2394 8.150945 TGCTTAGTGAAGAGAAGACTTAAATGT 58.849 33.333 0.00 0.00 34.25 2.71
2317 2395 9.640963 GCTTAGTGAAGAGAAGACTTAAATGTA 57.359 33.333 0.00 0.00 34.25 2.29
2321 2399 7.550906 AGTGAAGAGAAGACTTAAATGTATGGC 59.449 37.037 0.00 0.00 0.00 4.40
2322 2400 7.550906 GTGAAGAGAAGACTTAAATGTATGGCT 59.449 37.037 0.00 0.00 0.00 4.75
2323 2401 8.103305 TGAAGAGAAGACTTAAATGTATGGCTT 58.897 33.333 0.00 0.00 35.85 4.35
2324 2402 9.601217 GAAGAGAAGACTTAAATGTATGGCTTA 57.399 33.333 0.00 0.00 33.84 3.09
2325 2403 8.950208 AGAGAAGACTTAAATGTATGGCTTAC 57.050 34.615 0.00 3.72 33.84 2.34
2326 2404 8.763601 AGAGAAGACTTAAATGTATGGCTTACT 58.236 33.333 11.30 0.00 33.84 2.24
2327 2405 8.723942 AGAAGACTTAAATGTATGGCTTACTG 57.276 34.615 11.30 0.00 33.84 2.74
2328 2406 8.540388 AGAAGACTTAAATGTATGGCTTACTGA 58.460 33.333 11.30 0.00 33.84 3.41
2329 2407 8.723942 AAGACTTAAATGTATGGCTTACTGAG 57.276 34.615 11.30 1.62 32.33 3.35
2330 2408 7.275920 AGACTTAAATGTATGGCTTACTGAGG 58.724 38.462 11.30 1.48 0.00 3.86
2331 2409 7.125811 AGACTTAAATGTATGGCTTACTGAGGA 59.874 37.037 11.30 0.00 0.00 3.71
2332 2410 7.048512 ACTTAAATGTATGGCTTACTGAGGAC 58.951 38.462 11.30 0.00 0.00 3.85
2333 2411 5.435686 AAATGTATGGCTTACTGAGGACA 57.564 39.130 11.30 0.00 0.00 4.02
2334 2412 5.435686 AATGTATGGCTTACTGAGGACAA 57.564 39.130 11.30 0.00 0.00 3.18
2335 2413 5.636903 ATGTATGGCTTACTGAGGACAAT 57.363 39.130 11.30 0.00 0.00 2.71
2336 2414 6.747414 ATGTATGGCTTACTGAGGACAATA 57.253 37.500 11.30 0.00 0.00 1.90
2337 2415 6.553953 TGTATGGCTTACTGAGGACAATAA 57.446 37.500 11.30 0.00 0.00 1.40
2338 2416 6.953101 TGTATGGCTTACTGAGGACAATAAA 58.047 36.000 11.30 0.00 0.00 1.40
2339 2417 7.398829 TGTATGGCTTACTGAGGACAATAAAA 58.601 34.615 11.30 0.00 0.00 1.52
2340 2418 8.052748 TGTATGGCTTACTGAGGACAATAAAAT 58.947 33.333 11.30 0.00 0.00 1.82
2341 2419 9.555727 GTATGGCTTACTGAGGACAATAAAATA 57.444 33.333 3.46 0.00 0.00 1.40
2342 2420 8.682936 ATGGCTTACTGAGGACAATAAAATAG 57.317 34.615 0.00 0.00 0.00 1.73
2343 2421 7.857456 TGGCTTACTGAGGACAATAAAATAGA 58.143 34.615 0.00 0.00 0.00 1.98
2344 2422 7.769044 TGGCTTACTGAGGACAATAAAATAGAC 59.231 37.037 0.00 0.00 0.00 2.59
2345 2423 7.769044 GGCTTACTGAGGACAATAAAATAGACA 59.231 37.037 0.00 0.00 0.00 3.41
2346 2424 9.331282 GCTTACTGAGGACAATAAAATAGACAT 57.669 33.333 0.00 0.00 0.00 3.06
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
45 48 4.515191 ACACATGTAATTTCGTTCACTGCT 59.485 37.500 0.00 0.00 0.00 4.24
82 85 0.877071 CTCAGTCAAATGGCTTGCGT 59.123 50.000 0.00 0.00 34.76 5.24
83 86 1.159285 TCTCAGTCAAATGGCTTGCG 58.841 50.000 0.00 0.00 34.76 4.85
97 100 0.958091 CTCTCGGGCCAGTATCTCAG 59.042 60.000 4.39 0.00 0.00 3.35
154 157 2.602676 ATCACGGTGGGGGTCAAGG 61.603 63.158 8.50 0.00 0.00 3.61
287 290 1.867615 CGAGGTAGTAGATCGGCGG 59.132 63.158 7.21 0.00 32.93 6.13
310 313 0.546122 TAGTCGGCGGGTAGTTAGGA 59.454 55.000 7.21 0.00 0.00 2.94
315 318 1.000396 AGGTTAGTCGGCGGGTAGT 60.000 57.895 7.21 0.00 0.00 2.73
345 348 2.409870 GCCAGATTTCCAGGGCACG 61.410 63.158 0.00 0.00 45.70 5.34
353 356 0.533085 GCGGGTAGAGCCAGATTTCC 60.533 60.000 0.00 0.00 39.65 3.13
391 394 1.035923 TAGAGCTCGATTGCCAGAGG 58.964 55.000 8.37 0.00 35.19 3.69
395 398 1.823295 GGGTAGAGCTCGATTGCCA 59.177 57.895 8.37 0.00 0.00 4.92
403 412 1.525535 TAGTCGGCGGGTAGAGCTC 60.526 63.158 5.27 5.27 34.52 4.09
404 413 1.823041 GTAGTCGGCGGGTAGAGCT 60.823 63.158 7.21 0.00 34.52 4.09
500 509 3.605664 GCTTTTGGCTGCACCGGT 61.606 61.111 0.00 0.00 43.94 5.28
502 511 3.659092 TCGCTTTTGGCTGCACCG 61.659 61.111 0.50 0.00 43.94 4.94
503 512 2.050077 GTCGCTTTTGGCTGCACC 60.050 61.111 0.50 0.00 39.13 5.01
504 513 2.050077 GGTCGCTTTTGGCTGCAC 60.050 61.111 0.50 0.00 39.13 4.57
505 514 1.462731 AATGGTCGCTTTTGGCTGCA 61.463 50.000 0.50 0.00 39.13 4.41
506 515 1.010419 CAATGGTCGCTTTTGGCTGC 61.010 55.000 0.00 0.00 39.13 5.25
507 516 0.314935 ACAATGGTCGCTTTTGGCTG 59.685 50.000 0.00 0.00 39.13 4.85
508 517 0.598065 GACAATGGTCGCTTTTGGCT 59.402 50.000 0.00 0.00 39.13 4.75
509 518 3.107017 GACAATGGTCGCTTTTGGC 57.893 52.632 0.00 0.00 33.68 4.52
523 535 1.616865 CAGTAGGTTCCCACGAGACAA 59.383 52.381 0.00 0.00 0.00 3.18
524 536 1.254026 CAGTAGGTTCCCACGAGACA 58.746 55.000 0.00 0.00 0.00 3.41
535 547 2.663196 GTCGGCAGGCAGTAGGTT 59.337 61.111 0.00 0.00 0.00 3.50
620 633 0.250684 TGTAGGTACCCACGACACGA 60.251 55.000 8.74 0.00 0.00 4.35
621 634 0.813184 ATGTAGGTACCCACGACACG 59.187 55.000 8.74 0.00 0.00 4.49
624 637 2.017049 ACGTATGTAGGTACCCACGAC 58.983 52.381 20.52 13.62 36.50 4.34
720 733 1.063469 CCACGTATTTTCCCACGATGC 59.937 52.381 0.62 0.00 40.56 3.91
721 734 1.668751 CCCACGTATTTTCCCACGATG 59.331 52.381 0.62 0.00 40.56 3.84
722 735 2.015081 GCCCACGTATTTTCCCACGAT 61.015 52.381 0.62 0.00 40.56 3.73
730 743 3.806422 GCGGCGCCCACGTATTTT 61.806 61.111 23.58 0.00 42.83 1.82
923 943 1.070134 GCTACTGGTGGAGTTGTGTGA 59.930 52.381 0.00 0.00 35.96 3.58
938 958 2.416972 GCTACGTACTGGCTTTGCTACT 60.417 50.000 0.00 0.00 0.00 2.57
943 963 1.011968 TGCGCTACGTACTGGCTTTG 61.012 55.000 9.73 0.00 0.00 2.77
994 1019 3.221771 CCTTCTTGGTCCACATTGTGAA 58.778 45.455 18.33 0.00 35.23 3.18
1068 1093 4.496360 TGTCGACGGAGCAAAATAATACA 58.504 39.130 11.62 0.00 0.00 2.29
1069 1094 5.652744 ATGTCGACGGAGCAAAATAATAC 57.347 39.130 11.62 0.00 0.00 1.89
1070 1095 6.671614 AAATGTCGACGGAGCAAAATAATA 57.328 33.333 11.62 0.00 0.00 0.98
1071 1096 5.560966 AAATGTCGACGGAGCAAAATAAT 57.439 34.783 11.62 0.00 0.00 1.28
1072 1097 5.049336 TGAAAATGTCGACGGAGCAAAATAA 60.049 36.000 11.62 0.00 0.00 1.40
1073 1098 4.452795 TGAAAATGTCGACGGAGCAAAATA 59.547 37.500 11.62 0.00 0.00 1.40
1074 1099 3.252215 TGAAAATGTCGACGGAGCAAAAT 59.748 39.130 11.62 0.00 0.00 1.82
1075 1100 2.614520 TGAAAATGTCGACGGAGCAAAA 59.385 40.909 11.62 0.00 0.00 2.44
1076 1101 2.214347 TGAAAATGTCGACGGAGCAAA 58.786 42.857 11.62 0.00 0.00 3.68
1077 1102 1.872388 TGAAAATGTCGACGGAGCAA 58.128 45.000 11.62 0.00 0.00 3.91
1078 1103 1.999735 GATGAAAATGTCGACGGAGCA 59.000 47.619 11.62 5.77 0.00 4.26
1079 1104 1.999735 TGATGAAAATGTCGACGGAGC 59.000 47.619 11.62 0.00 0.00 4.70
1080 1105 3.511699 TCTGATGAAAATGTCGACGGAG 58.488 45.455 11.62 0.00 0.00 4.63
1081 1106 3.586100 TCTGATGAAAATGTCGACGGA 57.414 42.857 11.62 0.00 0.00 4.69
1082 1107 6.200854 TGAATATCTGATGAAAATGTCGACGG 59.799 38.462 11.62 0.00 0.00 4.79
1083 1108 7.043125 ACTGAATATCTGATGAAAATGTCGACG 60.043 37.037 11.62 0.00 0.00 5.12
1084 1109 8.136057 ACTGAATATCTGATGAAAATGTCGAC 57.864 34.615 9.11 9.11 0.00 4.20
1085 1110 8.606602 CAACTGAATATCTGATGAAAATGTCGA 58.393 33.333 0.00 0.00 0.00 4.20
1086 1111 7.854422 CCAACTGAATATCTGATGAAAATGTCG 59.146 37.037 0.00 0.00 0.00 4.35
1087 1112 8.896744 TCCAACTGAATATCTGATGAAAATGTC 58.103 33.333 0.00 0.00 0.00 3.06
1088 1113 8.812513 TCCAACTGAATATCTGATGAAAATGT 57.187 30.769 0.00 0.00 0.00 2.71
1251 1305 1.665679 CGCGCAGTTCTTATTGGACAT 59.334 47.619 8.75 0.00 0.00 3.06
1257 1311 1.128692 GACTTGCGCGCAGTTCTTATT 59.871 47.619 34.25 12.59 0.00 1.40
1282 1336 4.729918 CGCCCCAGCCTTCTTGCT 62.730 66.667 0.00 0.00 44.00 3.91
1483 1554 2.984623 CAGCTGGCTGGCTAGTGA 59.015 61.111 14.11 0.00 41.00 3.41
1524 1595 1.737199 ATTATACCTTAGCCCGCCCA 58.263 50.000 0.00 0.00 0.00 5.36
1526 1597 6.881570 TCTTATTATTATACCTTAGCCCGCC 58.118 40.000 0.00 0.00 0.00 6.13
1527 1598 8.959705 ATTCTTATTATTATACCTTAGCCCGC 57.040 34.615 0.00 0.00 0.00 6.13
1579 1655 4.142687 ACAGTGCAAACTTAACAGTGACAC 60.143 41.667 0.00 0.00 37.99 3.67
1583 1659 3.063452 ACGACAGTGCAAACTTAACAGTG 59.937 43.478 0.00 0.00 39.97 3.66
1586 1662 4.083217 ACAAACGACAGTGCAAACTTAACA 60.083 37.500 0.00 0.00 0.00 2.41
1589 1665 3.064271 GGACAAACGACAGTGCAAACTTA 59.936 43.478 0.00 0.00 0.00 2.24
1591 1667 1.400494 GGACAAACGACAGTGCAAACT 59.600 47.619 0.00 0.00 0.00 2.66
1592 1668 1.131504 TGGACAAACGACAGTGCAAAC 59.868 47.619 0.00 0.00 33.04 2.93
1595 1671 0.107897 ACTGGACAAACGACAGTGCA 60.108 50.000 0.00 0.00 43.29 4.57
1596 1672 0.582005 GACTGGACAAACGACAGTGC 59.418 55.000 0.81 0.00 44.79 4.40
1597 1673 0.852777 CGACTGGACAAACGACAGTG 59.147 55.000 0.81 0.00 44.79 3.66
1599 1675 1.129326 GACGACTGGACAAACGACAG 58.871 55.000 0.00 0.00 38.19 3.51
1600 1676 0.742505 AGACGACTGGACAAACGACA 59.257 50.000 0.00 0.00 0.00 4.35
1601 1677 1.001597 AGAGACGACTGGACAAACGAC 60.002 52.381 0.00 0.00 0.00 4.34
1602 1678 1.266175 GAGAGACGACTGGACAAACGA 59.734 52.381 0.00 0.00 0.00 3.85
1603 1679 1.687628 GAGAGACGACTGGACAAACG 58.312 55.000 0.00 0.00 0.00 3.60
1606 1682 0.536687 ACCGAGAGACGACTGGACAA 60.537 55.000 0.00 0.00 45.77 3.18
1607 1683 1.072678 ACCGAGAGACGACTGGACA 59.927 57.895 0.00 0.00 45.77 4.02
1612 1690 0.597072 GGAAACACCGAGAGACGACT 59.403 55.000 0.00 0.00 45.77 4.18
1623 1701 3.689649 AGCATAATCTGAACGGAAACACC 59.310 43.478 0.00 0.00 0.00 4.16
1624 1702 4.946784 AGCATAATCTGAACGGAAACAC 57.053 40.909 0.00 0.00 0.00 3.32
1626 1704 5.088739 CACAAGCATAATCTGAACGGAAAC 58.911 41.667 0.00 0.00 0.00 2.78
1629 1707 3.270027 CCACAAGCATAATCTGAACGGA 58.730 45.455 0.00 0.00 0.00 4.69
1643 1721 0.109597 CGATGAACCTTGCCACAAGC 60.110 55.000 1.73 0.00 44.14 4.01
1644 1722 1.466167 CTCGATGAACCTTGCCACAAG 59.534 52.381 0.24 0.24 0.00 3.16
1645 1723 1.071542 TCTCGATGAACCTTGCCACAA 59.928 47.619 0.00 0.00 0.00 3.33
1646 1724 0.684535 TCTCGATGAACCTTGCCACA 59.315 50.000 0.00 0.00 0.00 4.17
1647 1725 1.363744 CTCTCGATGAACCTTGCCAC 58.636 55.000 0.00 0.00 0.00 5.01
1652 1730 0.827368 GGGAGCTCTCGATGAACCTT 59.173 55.000 14.64 0.00 0.00 3.50
1654 1732 1.443828 GGGGAGCTCTCGATGAACC 59.556 63.158 14.64 3.12 0.00 3.62
1658 1736 1.456518 TCAGGGGGAGCTCTCGATG 60.457 63.158 14.64 11.87 0.00 3.84
1665 1743 2.948382 TAGCCTGTCAGGGGGAGCT 61.948 63.158 20.72 12.63 35.37 4.09
1673 1751 1.278985 TCCAACATGGTAGCCTGTCAG 59.721 52.381 3.24 0.00 39.03 3.51
1676 1754 2.172717 GGTATCCAACATGGTAGCCTGT 59.827 50.000 0.00 0.00 39.03 4.00
1702 1780 4.181578 CGTTTATCGAAGAACATCCCACT 58.818 43.478 12.78 0.00 43.58 4.00
1717 1795 4.066710 AGCGTTTTCTTCTGCGTTTATC 57.933 40.909 0.00 0.00 0.00 1.75
1719 1797 2.867368 TGAGCGTTTTCTTCTGCGTTTA 59.133 40.909 0.00 0.00 0.00 2.01
1747 1825 1.626654 AAGCTCACATGCGTGCGTAC 61.627 55.000 5.64 0.00 43.28 3.67
1748 1826 1.351430 GAAGCTCACATGCGTGCGTA 61.351 55.000 5.64 0.00 43.28 4.42
1749 1827 2.666190 AAGCTCACATGCGTGCGT 60.666 55.556 5.64 0.00 43.28 5.24
1750 1828 2.097160 GAAGCTCACATGCGTGCG 59.903 61.111 5.64 0.00 43.28 5.34
1751 1829 0.040157 TTTGAAGCTCACATGCGTGC 60.040 50.000 5.64 0.00 43.28 5.34
1752 1830 2.404265 TTTTGAAGCTCACATGCGTG 57.596 45.000 3.82 3.82 45.08 5.34
1753 1831 2.618241 TCTTTTTGAAGCTCACATGCGT 59.382 40.909 0.00 0.00 38.13 5.24
1754 1832 3.272439 TCTTTTTGAAGCTCACATGCG 57.728 42.857 0.00 0.00 38.13 4.73
1755 1833 6.535274 AAATTCTTTTTGAAGCTCACATGC 57.465 33.333 0.00 0.00 38.18 4.06
1756 1834 9.033481 TGTAAAATTCTTTTTGAAGCTCACATG 57.967 29.630 0.00 0.00 38.18 3.21
1757 1835 9.252962 CTGTAAAATTCTTTTTGAAGCTCACAT 57.747 29.630 0.00 0.00 38.18 3.21
1758 1836 8.465999 TCTGTAAAATTCTTTTTGAAGCTCACA 58.534 29.630 0.00 0.00 38.18 3.58
1759 1837 8.746751 GTCTGTAAAATTCTTTTTGAAGCTCAC 58.253 33.333 0.00 0.00 38.18 3.51
1760 1838 8.465999 TGTCTGTAAAATTCTTTTTGAAGCTCA 58.534 29.630 0.00 0.00 38.18 4.26
1761 1839 8.746751 GTGTCTGTAAAATTCTTTTTGAAGCTC 58.253 33.333 0.00 0.00 38.18 4.09
1762 1840 8.250332 TGTGTCTGTAAAATTCTTTTTGAAGCT 58.750 29.630 0.00 0.00 38.18 3.74
1763 1841 8.321005 GTGTGTCTGTAAAATTCTTTTTGAAGC 58.679 33.333 0.00 0.00 38.18 3.86
1764 1842 9.573133 AGTGTGTCTGTAAAATTCTTTTTGAAG 57.427 29.630 0.00 0.00 38.18 3.02
1765 1843 9.921637 AAGTGTGTCTGTAAAATTCTTTTTGAA 57.078 25.926 0.00 0.00 35.82 2.69
1766 1844 9.567848 GAAGTGTGTCTGTAAAATTCTTTTTGA 57.432 29.630 0.00 0.00 35.82 2.69
1767 1845 8.523464 CGAAGTGTGTCTGTAAAATTCTTTTTG 58.477 33.333 0.00 0.00 35.82 2.44
1768 1846 8.455682 TCGAAGTGTGTCTGTAAAATTCTTTTT 58.544 29.630 0.00 0.00 38.56 1.94
1769 1847 7.981142 TCGAAGTGTGTCTGTAAAATTCTTTT 58.019 30.769 0.00 0.00 36.67 2.27
1770 1848 7.548196 TCGAAGTGTGTCTGTAAAATTCTTT 57.452 32.000 0.00 0.00 0.00 2.52
1771 1849 7.280205 ACTTCGAAGTGTGTCTGTAAAATTCTT 59.720 33.333 29.24 0.00 37.98 2.52
1772 1850 6.761714 ACTTCGAAGTGTGTCTGTAAAATTCT 59.238 34.615 29.24 0.00 37.98 2.40
1773 1851 6.945072 ACTTCGAAGTGTGTCTGTAAAATTC 58.055 36.000 29.24 0.00 37.98 2.17
1774 1852 6.018180 GGACTTCGAAGTGTGTCTGTAAAATT 60.018 38.462 34.23 4.45 39.88 1.82
1775 1853 5.465724 GGACTTCGAAGTGTGTCTGTAAAAT 59.534 40.000 34.23 5.16 39.88 1.82
1776 1854 4.807304 GGACTTCGAAGTGTGTCTGTAAAA 59.193 41.667 34.23 0.00 39.88 1.52
1777 1855 4.365723 GGACTTCGAAGTGTGTCTGTAAA 58.634 43.478 34.23 0.00 39.88 2.01
1778 1856 3.243636 GGGACTTCGAAGTGTGTCTGTAA 60.244 47.826 34.23 0.00 39.88 2.41
1779 1857 2.295349 GGGACTTCGAAGTGTGTCTGTA 59.705 50.000 34.23 0.00 39.88 2.74
1780 1858 1.068741 GGGACTTCGAAGTGTGTCTGT 59.931 52.381 34.23 8.91 39.88 3.41
1781 1859 1.341531 AGGGACTTCGAAGTGTGTCTG 59.658 52.381 34.23 5.34 39.88 3.51
1782 1860 1.705873 AGGGACTTCGAAGTGTGTCT 58.294 50.000 34.23 20.73 39.88 3.41
1783 1861 3.870633 ATAGGGACTTCGAAGTGTGTC 57.129 47.619 34.23 19.54 39.88 3.67
1784 1862 5.014858 TCTAATAGGGACTTCGAAGTGTGT 58.985 41.667 34.23 19.36 39.88 3.72
1785 1863 5.105877 TGTCTAATAGGGACTTCGAAGTGTG 60.106 44.000 34.23 14.21 39.88 3.82
1786 1864 5.014858 TGTCTAATAGGGACTTCGAAGTGT 58.985 41.667 34.23 20.03 39.88 3.55
1787 1865 5.341617 GTGTCTAATAGGGACTTCGAAGTG 58.658 45.833 34.23 17.25 39.88 3.16
1788 1866 4.401837 GGTGTCTAATAGGGACTTCGAAGT 59.598 45.833 30.12 30.12 43.16 3.01
1789 1867 4.645588 AGGTGTCTAATAGGGACTTCGAAG 59.354 45.833 23.43 23.43 41.75 3.79
1790 1868 4.607239 AGGTGTCTAATAGGGACTTCGAA 58.393 43.478 0.00 0.00 41.75 3.71
1791 1869 4.205587 GAGGTGTCTAATAGGGACTTCGA 58.794 47.826 0.00 0.00 41.75 3.71
1792 1870 3.003482 CGAGGTGTCTAATAGGGACTTCG 59.997 52.174 8.70 8.70 41.75 3.79
1793 1871 3.952967 ACGAGGTGTCTAATAGGGACTTC 59.047 47.826 0.00 0.00 41.75 3.01
1794 1872 3.978610 ACGAGGTGTCTAATAGGGACTT 58.021 45.455 0.00 0.00 41.75 3.01
1795 1873 3.666345 ACGAGGTGTCTAATAGGGACT 57.334 47.619 0.00 0.00 46.37 3.85
1796 1874 7.700022 ATAATACGAGGTGTCTAATAGGGAC 57.300 40.000 0.00 0.00 0.00 4.46
1797 1875 9.986157 ATAATAATACGAGGTGTCTAATAGGGA 57.014 33.333 0.00 0.00 0.00 4.20
1824 1902 8.514330 AATACAAGGTGTCTACAACTCAAAAA 57.486 30.769 0.22 0.00 44.43 1.94
1825 1903 7.042321 CGAATACAAGGTGTCTACAACTCAAAA 60.042 37.037 0.22 0.00 44.43 2.44
1826 1904 6.422701 CGAATACAAGGTGTCTACAACTCAAA 59.577 38.462 0.22 0.00 44.43 2.69
1827 1905 5.924254 CGAATACAAGGTGTCTACAACTCAA 59.076 40.000 0.22 0.00 44.43 3.02
1828 1906 5.242171 TCGAATACAAGGTGTCTACAACTCA 59.758 40.000 0.22 0.00 44.43 3.41
1829 1907 5.572126 GTCGAATACAAGGTGTCTACAACTC 59.428 44.000 0.22 0.00 44.43 3.01
1831 1909 4.322804 CGTCGAATACAAGGTGTCTACAAC 59.677 45.833 0.00 0.00 0.00 3.32
1832 1910 4.478699 CGTCGAATACAAGGTGTCTACAA 58.521 43.478 0.00 0.00 0.00 2.41
1833 1911 3.119743 CCGTCGAATACAAGGTGTCTACA 60.120 47.826 0.00 0.00 0.00 2.74
1834 1912 3.127548 TCCGTCGAATACAAGGTGTCTAC 59.872 47.826 0.00 0.00 0.00 2.59
1835 1913 3.127548 GTCCGTCGAATACAAGGTGTCTA 59.872 47.826 0.00 0.00 0.00 2.59
1836 1914 2.094854 GTCCGTCGAATACAAGGTGTCT 60.095 50.000 0.00 0.00 0.00 3.41
1837 1915 2.257034 GTCCGTCGAATACAAGGTGTC 58.743 52.381 0.00 0.00 0.00 3.67
1838 1916 1.401931 CGTCCGTCGAATACAAGGTGT 60.402 52.381 0.00 0.00 42.86 4.16
1839 1917 1.265568 CGTCCGTCGAATACAAGGTG 58.734 55.000 0.00 0.00 42.86 4.00
1840 1918 0.883833 ACGTCCGTCGAATACAAGGT 59.116 50.000 0.00 0.00 42.86 3.50
1841 1919 2.830772 TACGTCCGTCGAATACAAGG 57.169 50.000 0.00 0.00 42.86 3.61
1842 1920 7.058806 GTGTATAATACGTCCGTCGAATACAAG 59.941 40.741 16.06 0.00 42.86 3.16
1843 1921 6.850823 GTGTATAATACGTCCGTCGAATACAA 59.149 38.462 16.06 5.40 42.86 2.41
1844 1922 6.018343 TGTGTATAATACGTCCGTCGAATACA 60.018 38.462 12.85 12.85 42.86 2.29
1845 1923 6.362686 TGTGTATAATACGTCCGTCGAATAC 58.637 40.000 0.00 3.97 42.86 1.89
1846 1924 6.538189 TGTGTATAATACGTCCGTCGAATA 57.462 37.500 0.00 0.00 42.86 1.75
1847 1925 5.422666 TGTGTATAATACGTCCGTCGAAT 57.577 39.130 0.00 0.00 42.86 3.34
1848 1926 4.873768 TGTGTATAATACGTCCGTCGAA 57.126 40.909 0.00 0.00 42.86 3.71
1849 1927 4.511082 TCATGTGTATAATACGTCCGTCGA 59.489 41.667 0.00 0.00 42.86 4.20
1850 1928 4.775664 TCATGTGTATAATACGTCCGTCG 58.224 43.478 0.00 0.00 46.00 5.12
1851 1929 4.615961 GCTCATGTGTATAATACGTCCGTC 59.384 45.833 0.00 0.00 0.00 4.79
1852 1930 4.543692 GCTCATGTGTATAATACGTCCGT 58.456 43.478 0.00 0.00 0.00 4.69
1853 1931 3.602489 CGCTCATGTGTATAATACGTCCG 59.398 47.826 0.00 0.00 0.00 4.79
1854 1932 4.790878 TCGCTCATGTGTATAATACGTCC 58.209 43.478 0.00 0.00 0.00 4.79
1855 1933 5.913514 ACTTCGCTCATGTGTATAATACGTC 59.086 40.000 0.00 0.00 0.00 4.34
1856 1934 5.828747 ACTTCGCTCATGTGTATAATACGT 58.171 37.500 0.00 0.00 0.00 3.57
1857 1935 5.912955 TGACTTCGCTCATGTGTATAATACG 59.087 40.000 0.00 0.00 0.00 3.06
1858 1936 7.875316 ATGACTTCGCTCATGTGTATAATAC 57.125 36.000 0.00 0.00 29.23 1.89
1859 1937 8.360390 AGAATGACTTCGCTCATGTGTATAATA 58.640 33.333 0.00 0.00 36.45 0.98
1860 1938 7.212976 AGAATGACTTCGCTCATGTGTATAAT 58.787 34.615 0.00 0.00 36.45 1.28
1861 1939 6.573434 AGAATGACTTCGCTCATGTGTATAA 58.427 36.000 0.00 0.00 36.45 0.98
1862 1940 6.149129 AGAATGACTTCGCTCATGTGTATA 57.851 37.500 0.00 0.00 36.45 1.47
1863 1941 5.016051 AGAATGACTTCGCTCATGTGTAT 57.984 39.130 0.00 0.00 36.45 2.29
1864 1942 4.456280 AGAATGACTTCGCTCATGTGTA 57.544 40.909 0.00 0.00 36.45 2.90
1865 1943 3.325293 AGAATGACTTCGCTCATGTGT 57.675 42.857 0.00 0.00 36.45 3.72
1866 1944 4.269603 CCTAAGAATGACTTCGCTCATGTG 59.730 45.833 0.00 0.00 39.72 3.21
1867 1945 4.081420 ACCTAAGAATGACTTCGCTCATGT 60.081 41.667 0.00 0.00 39.72 3.21
1868 1946 4.437239 ACCTAAGAATGACTTCGCTCATG 58.563 43.478 0.00 0.00 39.72 3.07
1869 1947 4.744795 ACCTAAGAATGACTTCGCTCAT 57.255 40.909 0.00 0.00 39.72 2.90
1870 1948 5.854010 ATACCTAAGAATGACTTCGCTCA 57.146 39.130 0.00 0.00 39.72 4.26
1871 1949 5.852229 CGTATACCTAAGAATGACTTCGCTC 59.148 44.000 0.00 0.00 39.72 5.03
1872 1950 5.530171 TCGTATACCTAAGAATGACTTCGCT 59.470 40.000 0.00 0.00 39.72 4.93
1873 1951 5.755813 TCGTATACCTAAGAATGACTTCGC 58.244 41.667 0.00 0.00 39.72 4.70
1874 1952 7.070798 GTCTCGTATACCTAAGAATGACTTCG 58.929 42.308 0.00 0.00 39.72 3.79
1875 1953 7.229106 AGGTCTCGTATACCTAAGAATGACTTC 59.771 40.741 4.62 0.00 45.69 3.01
1876 1954 7.061688 AGGTCTCGTATACCTAAGAATGACTT 58.938 38.462 4.62 0.00 45.69 3.01
1877 1955 6.603224 AGGTCTCGTATACCTAAGAATGACT 58.397 40.000 4.62 0.00 45.69 3.41
1878 1956 6.880942 AGGTCTCGTATACCTAAGAATGAC 57.119 41.667 4.62 0.00 45.69 3.06
1888 1966 5.690857 GCTTTGTTATGAGGTCTCGTATACC 59.309 44.000 0.00 0.00 37.27 2.73
1889 1967 5.690857 GGCTTTGTTATGAGGTCTCGTATAC 59.309 44.000 1.27 0.00 31.79 1.47
1890 1968 5.597182 AGGCTTTGTTATGAGGTCTCGTATA 59.403 40.000 1.27 0.00 31.79 1.47
1891 1969 4.406003 AGGCTTTGTTATGAGGTCTCGTAT 59.594 41.667 1.27 0.00 31.79 3.06
1892 1970 3.767673 AGGCTTTGTTATGAGGTCTCGTA 59.232 43.478 0.00 0.00 0.00 3.43
1893 1971 2.567615 AGGCTTTGTTATGAGGTCTCGT 59.432 45.455 0.00 0.00 0.00 4.18
1894 1972 2.932614 CAGGCTTTGTTATGAGGTCTCG 59.067 50.000 0.00 0.00 0.00 4.04
1895 1973 4.207891 TCAGGCTTTGTTATGAGGTCTC 57.792 45.455 0.00 0.00 0.00 3.36
1896 1974 4.640771 TTCAGGCTTTGTTATGAGGTCT 57.359 40.909 0.00 0.00 0.00 3.85
1897 1975 5.904362 ATTTCAGGCTTTGTTATGAGGTC 57.096 39.130 0.00 0.00 0.00 3.85
1898 1976 7.309805 GGTTTATTTCAGGCTTTGTTATGAGGT 60.310 37.037 0.00 0.00 0.00 3.85
1899 1977 7.035612 GGTTTATTTCAGGCTTTGTTATGAGG 58.964 38.462 0.00 0.00 0.00 3.86
1900 1978 7.601856 TGGTTTATTTCAGGCTTTGTTATGAG 58.398 34.615 0.00 0.00 0.00 2.90
1901 1979 7.531857 TGGTTTATTTCAGGCTTTGTTATGA 57.468 32.000 0.00 0.00 0.00 2.15
1902 1980 7.148590 GCTTGGTTTATTTCAGGCTTTGTTATG 60.149 37.037 0.00 0.00 33.91 1.90
1903 1981 6.873605 GCTTGGTTTATTTCAGGCTTTGTTAT 59.126 34.615 0.00 0.00 33.91 1.89
1904 1982 6.041523 AGCTTGGTTTATTTCAGGCTTTGTTA 59.958 34.615 0.00 0.00 42.39 2.41
1905 1983 5.056480 GCTTGGTTTATTTCAGGCTTTGTT 58.944 37.500 0.00 0.00 33.91 2.83
1906 1984 4.344968 AGCTTGGTTTATTTCAGGCTTTGT 59.655 37.500 0.00 0.00 42.39 2.83
1907 1985 4.886579 AGCTTGGTTTATTTCAGGCTTTG 58.113 39.130 0.00 0.00 42.39 2.77
1908 1986 6.664428 TTAGCTTGGTTTATTTCAGGCTTT 57.336 33.333 5.35 0.00 42.39 3.51
1909 1987 6.857437 ATTAGCTTGGTTTATTTCAGGCTT 57.143 33.333 5.35 0.00 42.39 4.35
1910 1988 6.038271 CGTATTAGCTTGGTTTATTTCAGGCT 59.962 38.462 0.00 5.37 45.87 4.58
1911 1989 6.037830 TCGTATTAGCTTGGTTTATTTCAGGC 59.962 38.462 0.00 0.00 36.43 4.85
1912 1990 7.548196 TCGTATTAGCTTGGTTTATTTCAGG 57.452 36.000 0.00 0.00 0.00 3.86
1920 1998 9.477484 CATCTAGTTATCGTATTAGCTTGGTTT 57.523 33.333 0.00 0.00 0.00 3.27
1921 1999 8.857098 TCATCTAGTTATCGTATTAGCTTGGTT 58.143 33.333 0.00 0.00 0.00 3.67
1922 2000 8.405418 TCATCTAGTTATCGTATTAGCTTGGT 57.595 34.615 0.00 0.00 0.00 3.67
1923 2001 9.347934 CTTCATCTAGTTATCGTATTAGCTTGG 57.652 37.037 0.00 0.00 0.00 3.61
1924 2002 8.855279 GCTTCATCTAGTTATCGTATTAGCTTG 58.145 37.037 0.00 0.00 0.00 4.01
1925 2003 8.030106 GGCTTCATCTAGTTATCGTATTAGCTT 58.970 37.037 0.00 0.00 0.00 3.74
1926 2004 7.363094 GGGCTTCATCTAGTTATCGTATTAGCT 60.363 40.741 0.00 0.00 0.00 3.32
1927 2005 6.752815 GGGCTTCATCTAGTTATCGTATTAGC 59.247 42.308 0.00 0.00 0.00 3.09
1928 2006 7.827701 TGGGCTTCATCTAGTTATCGTATTAG 58.172 38.462 0.00 0.00 0.00 1.73
1929 2007 7.577046 GCTGGGCTTCATCTAGTTATCGTATTA 60.577 40.741 0.00 0.00 0.00 0.98
1930 2008 6.665992 TGGGCTTCATCTAGTTATCGTATT 57.334 37.500 0.00 0.00 0.00 1.89
1931 2009 5.336849 GCTGGGCTTCATCTAGTTATCGTAT 60.337 44.000 0.00 0.00 0.00 3.06
1932 2010 4.022242 GCTGGGCTTCATCTAGTTATCGTA 60.022 45.833 0.00 0.00 0.00 3.43
1933 2011 3.243907 GCTGGGCTTCATCTAGTTATCGT 60.244 47.826 0.00 0.00 0.00 3.73
1934 2012 3.321497 GCTGGGCTTCATCTAGTTATCG 58.679 50.000 0.00 0.00 0.00 2.92
1935 2013 3.321497 CGCTGGGCTTCATCTAGTTATC 58.679 50.000 0.00 0.00 0.00 1.75
1936 2014 2.548920 GCGCTGGGCTTCATCTAGTTAT 60.549 50.000 9.69 0.00 39.11 1.89
1937 2015 1.202533 GCGCTGGGCTTCATCTAGTTA 60.203 52.381 9.69 0.00 39.11 2.24
1938 2016 0.462759 GCGCTGGGCTTCATCTAGTT 60.463 55.000 9.69 0.00 39.11 2.24
1939 2017 1.144936 GCGCTGGGCTTCATCTAGT 59.855 57.895 9.69 0.00 39.11 2.57
1940 2018 1.953138 CGCGCTGGGCTTCATCTAG 60.953 63.158 14.94 0.00 40.44 2.43
1941 2019 2.106938 CGCGCTGGGCTTCATCTA 59.893 61.111 14.94 0.00 40.44 1.98
1942 2020 3.612247 AACGCGCTGGGCTTCATCT 62.612 57.895 5.73 0.00 40.44 2.90
1943 2021 3.127533 AACGCGCTGGGCTTCATC 61.128 61.111 5.73 0.00 40.44 2.92
1944 2022 3.434319 CAACGCGCTGGGCTTCAT 61.434 61.111 5.73 0.00 40.44 2.57
1954 2032 0.165944 AACAGTGATAAGCAACGCGC 59.834 50.000 5.73 0.00 42.91 6.86
1955 2033 2.594529 AAACAGTGATAAGCAACGCG 57.405 45.000 3.53 3.53 0.00 6.01
1956 2034 6.741448 TTTTTAAACAGTGATAAGCAACGC 57.259 33.333 0.00 0.00 0.00 4.84
1957 2035 9.388346 TGTATTTTTAAACAGTGATAAGCAACG 57.612 29.630 0.00 0.00 0.00 4.10
2008 2086 9.739276 TCAAGCTTCTATTTTCTTTCCAATAGA 57.261 29.630 0.00 0.00 39.29 1.98
2020 2098 9.933723 ACAGCAATTTATTCAAGCTTCTATTTT 57.066 25.926 0.00 0.00 32.35 1.82
2021 2099 9.933723 AACAGCAATTTATTCAAGCTTCTATTT 57.066 25.926 0.00 0.00 32.35 1.40
2022 2100 9.933723 AAACAGCAATTTATTCAAGCTTCTATT 57.066 25.926 0.00 0.00 32.35 1.73
2025 2103 9.762933 TTTAAACAGCAATTTATTCAAGCTTCT 57.237 25.926 0.00 0.00 32.35 2.85
2159 2237 9.709495 CATCCTTCCTATTTTTGTTTGAAATGA 57.291 29.630 0.00 0.00 0.00 2.57
2160 2238 8.938906 CCATCCTTCCTATTTTTGTTTGAAATG 58.061 33.333 0.00 0.00 0.00 2.32
2161 2239 7.607607 GCCATCCTTCCTATTTTTGTTTGAAAT 59.392 33.333 0.00 0.00 0.00 2.17
2162 2240 6.934083 GCCATCCTTCCTATTTTTGTTTGAAA 59.066 34.615 0.00 0.00 0.00 2.69
2163 2241 6.269769 AGCCATCCTTCCTATTTTTGTTTGAA 59.730 34.615 0.00 0.00 0.00 2.69
2164 2242 5.779771 AGCCATCCTTCCTATTTTTGTTTGA 59.220 36.000 0.00 0.00 0.00 2.69
2165 2243 5.870978 CAGCCATCCTTCCTATTTTTGTTTG 59.129 40.000 0.00 0.00 0.00 2.93
2166 2244 5.779771 TCAGCCATCCTTCCTATTTTTGTTT 59.220 36.000 0.00 0.00 0.00 2.83
2167 2245 5.185828 GTCAGCCATCCTTCCTATTTTTGTT 59.814 40.000 0.00 0.00 0.00 2.83
2168 2246 4.706962 GTCAGCCATCCTTCCTATTTTTGT 59.293 41.667 0.00 0.00 0.00 2.83
2169 2247 4.706476 TGTCAGCCATCCTTCCTATTTTTG 59.294 41.667 0.00 0.00 0.00 2.44
2170 2248 4.934356 TGTCAGCCATCCTTCCTATTTTT 58.066 39.130 0.00 0.00 0.00 1.94
2171 2249 4.591321 TGTCAGCCATCCTTCCTATTTT 57.409 40.909 0.00 0.00 0.00 1.82
2172 2250 4.467769 CATGTCAGCCATCCTTCCTATTT 58.532 43.478 0.00 0.00 0.00 1.40
2173 2251 3.749954 GCATGTCAGCCATCCTTCCTATT 60.750 47.826 0.00 0.00 0.00 1.73
2174 2252 2.224719 GCATGTCAGCCATCCTTCCTAT 60.225 50.000 0.00 0.00 0.00 2.57
2175 2253 1.141657 GCATGTCAGCCATCCTTCCTA 59.858 52.381 0.00 0.00 0.00 2.94
2176 2254 0.106819 GCATGTCAGCCATCCTTCCT 60.107 55.000 0.00 0.00 0.00 3.36
2177 2255 0.394762 TGCATGTCAGCCATCCTTCC 60.395 55.000 0.00 0.00 0.00 3.46
2178 2256 1.337071 CATGCATGTCAGCCATCCTTC 59.663 52.381 18.91 0.00 0.00 3.46
2179 2257 1.341679 ACATGCATGTCAGCCATCCTT 60.342 47.619 26.61 0.00 35.87 3.36
2180 2258 0.257905 ACATGCATGTCAGCCATCCT 59.742 50.000 26.61 0.00 35.87 3.24
2181 2259 1.971481 TACATGCATGTCAGCCATCC 58.029 50.000 34.54 0.00 41.97 3.51
2182 2260 3.143728 TCATACATGCATGTCAGCCATC 58.856 45.455 34.54 0.00 41.97 3.51
2183 2261 3.217681 TCATACATGCATGTCAGCCAT 57.782 42.857 34.54 19.67 41.97 4.40
2184 2262 2.713863 TCATACATGCATGTCAGCCA 57.286 45.000 34.54 18.21 41.97 4.75
2185 2263 2.882761 ACATCATACATGCATGTCAGCC 59.117 45.455 34.54 0.00 41.97 4.85
2186 2264 5.007921 TGTTACATCATACATGCATGTCAGC 59.992 40.000 34.54 15.47 41.97 4.26
2187 2265 6.607735 TGTTACATCATACATGCATGTCAG 57.392 37.500 34.54 26.13 41.97 3.51
2188 2266 6.961576 CATGTTACATCATACATGCATGTCA 58.038 36.000 34.54 22.29 43.41 3.58
2196 2274 8.851541 TCATACATGCATGTTACATCATACAT 57.148 30.769 35.45 16.81 41.97 2.29
2197 2275 8.723311 CATCATACATGCATGTTACATCATACA 58.277 33.333 35.45 15.24 41.97 2.29
2198 2276 8.724229 ACATCATACATGCATGTTACATCATAC 58.276 33.333 35.45 0.00 41.97 2.39
2199 2277 8.723311 CACATCATACATGCATGTTACATCATA 58.277 33.333 35.45 16.72 41.97 2.15
2200 2278 7.308951 CCACATCATACATGCATGTTACATCAT 60.309 37.037 35.45 19.65 41.97 2.45
2201 2279 6.016943 CCACATCATACATGCATGTTACATCA 60.017 38.462 35.45 18.22 41.97 3.07
2202 2280 6.376177 CCACATCATACATGCATGTTACATC 58.624 40.000 35.45 0.00 41.97 3.06
2203 2281 5.278610 GCCACATCATACATGCATGTTACAT 60.279 40.000 35.45 21.09 41.97 2.29
2204 2282 4.036616 GCCACATCATACATGCATGTTACA 59.963 41.667 35.45 19.73 41.97 2.41
2205 2283 4.036616 TGCCACATCATACATGCATGTTAC 59.963 41.667 35.45 13.42 41.97 2.50
2206 2284 4.205587 TGCCACATCATACATGCATGTTA 58.794 39.130 35.45 21.75 41.97 2.41
2207 2285 3.025262 TGCCACATCATACATGCATGTT 58.975 40.909 35.45 20.56 41.97 2.71
2208 2286 2.621526 CTGCCACATCATACATGCATGT 59.378 45.455 33.20 33.20 44.48 3.21
2209 2287 2.607038 GCTGCCACATCATACATGCATG 60.607 50.000 25.09 25.09 0.00 4.06
2210 2288 1.611977 GCTGCCACATCATACATGCAT 59.388 47.619 0.00 0.00 0.00 3.96
2211 2289 1.026584 GCTGCCACATCATACATGCA 58.973 50.000 0.00 0.00 0.00 3.96
2212 2290 0.040692 CGCTGCCACATCATACATGC 60.041 55.000 0.00 0.00 0.00 4.06
2213 2291 1.003223 CACGCTGCCACATCATACATG 60.003 52.381 0.00 0.00 0.00 3.21
2214 2292 1.302366 CACGCTGCCACATCATACAT 58.698 50.000 0.00 0.00 0.00 2.29
2215 2293 0.036483 ACACGCTGCCACATCATACA 60.036 50.000 0.00 0.00 0.00 2.29
2216 2294 1.086696 AACACGCTGCCACATCATAC 58.913 50.000 0.00 0.00 0.00 2.39
2217 2295 2.682155 TAACACGCTGCCACATCATA 57.318 45.000 0.00 0.00 0.00 2.15
2218 2296 2.042686 ATAACACGCTGCCACATCAT 57.957 45.000 0.00 0.00 0.00 2.45
2219 2297 1.737236 GAATAACACGCTGCCACATCA 59.263 47.619 0.00 0.00 0.00 3.07
2220 2298 1.737236 TGAATAACACGCTGCCACATC 59.263 47.619 0.00 0.00 0.00 3.06
2221 2299 1.819928 TGAATAACACGCTGCCACAT 58.180 45.000 0.00 0.00 0.00 3.21
2222 2300 1.819928 ATGAATAACACGCTGCCACA 58.180 45.000 0.00 0.00 0.00 4.17
2223 2301 3.194861 TCTATGAATAACACGCTGCCAC 58.805 45.455 0.00 0.00 0.00 5.01
2224 2302 3.535280 TCTATGAATAACACGCTGCCA 57.465 42.857 0.00 0.00 0.00 4.92
2225 2303 6.539649 TTAATCTATGAATAACACGCTGCC 57.460 37.500 0.00 0.00 0.00 4.85
2253 2331 9.573166 TCTGCCACATAAGCAAGTATAATAATT 57.427 29.630 0.00 0.00 40.35 1.40
2254 2332 9.003658 GTCTGCCACATAAGCAAGTATAATAAT 57.996 33.333 0.00 0.00 40.35 1.28
2255 2333 8.210946 AGTCTGCCACATAAGCAAGTATAATAA 58.789 33.333 0.00 0.00 40.35 1.40
2256 2334 7.735917 AGTCTGCCACATAAGCAAGTATAATA 58.264 34.615 0.00 0.00 40.35 0.98
2257 2335 6.595682 AGTCTGCCACATAAGCAAGTATAAT 58.404 36.000 0.00 0.00 40.35 1.28
2258 2336 5.989477 AGTCTGCCACATAAGCAAGTATAA 58.011 37.500 0.00 0.00 40.35 0.98
2259 2337 5.614324 AGTCTGCCACATAAGCAAGTATA 57.386 39.130 0.00 0.00 40.35 1.47
2260 2338 4.494091 AGTCTGCCACATAAGCAAGTAT 57.506 40.909 0.00 0.00 40.35 2.12
2261 2339 3.981071 AGTCTGCCACATAAGCAAGTA 57.019 42.857 0.00 0.00 40.35 2.24
2262 2340 2.867109 AGTCTGCCACATAAGCAAGT 57.133 45.000 0.00 0.00 40.35 3.16
2263 2341 5.355071 TCATTTAGTCTGCCACATAAGCAAG 59.645 40.000 0.00 0.00 40.35 4.01
2264 2342 5.252547 TCATTTAGTCTGCCACATAAGCAA 58.747 37.500 0.00 0.00 40.35 3.91
2265 2343 4.842574 TCATTTAGTCTGCCACATAAGCA 58.157 39.130 0.00 0.00 38.82 3.91
2266 2344 5.818136 TTCATTTAGTCTGCCACATAAGC 57.182 39.130 0.00 0.00 0.00 3.09
2267 2345 6.694411 GCAATTCATTTAGTCTGCCACATAAG 59.306 38.462 0.00 0.00 0.00 1.73
2268 2346 6.377996 AGCAATTCATTTAGTCTGCCACATAA 59.622 34.615 0.00 0.00 0.00 1.90
2269 2347 5.887598 AGCAATTCATTTAGTCTGCCACATA 59.112 36.000 0.00 0.00 0.00 2.29
2270 2348 4.708421 AGCAATTCATTTAGTCTGCCACAT 59.292 37.500 0.00 0.00 0.00 3.21
2271 2349 4.081406 AGCAATTCATTTAGTCTGCCACA 58.919 39.130 0.00 0.00 0.00 4.17
2272 2350 4.708726 AGCAATTCATTTAGTCTGCCAC 57.291 40.909 0.00 0.00 0.00 5.01
2273 2351 5.945784 ACTAAGCAATTCATTTAGTCTGCCA 59.054 36.000 0.00 0.00 33.57 4.92
2274 2352 6.094048 TCACTAAGCAATTCATTTAGTCTGCC 59.906 38.462 3.85 0.00 35.93 4.85
2275 2353 7.076842 TCACTAAGCAATTCATTTAGTCTGC 57.923 36.000 3.85 0.00 35.93 4.26
2276 2354 8.939929 TCTTCACTAAGCAATTCATTTAGTCTG 58.060 33.333 3.85 0.00 35.93 3.51
2277 2355 9.160496 CTCTTCACTAAGCAATTCATTTAGTCT 57.840 33.333 3.85 0.00 35.93 3.24
2278 2356 9.155975 TCTCTTCACTAAGCAATTCATTTAGTC 57.844 33.333 3.85 0.00 35.93 2.59
2279 2357 9.507329 TTCTCTTCACTAAGCAATTCATTTAGT 57.493 29.630 0.00 1.75 37.95 2.24
2280 2358 9.985318 CTTCTCTTCACTAAGCAATTCATTTAG 57.015 33.333 0.00 0.00 32.36 1.85
2281 2359 9.725019 TCTTCTCTTCACTAAGCAATTCATTTA 57.275 29.630 0.00 0.00 32.36 1.40
2282 2360 8.510505 GTCTTCTCTTCACTAAGCAATTCATTT 58.489 33.333 0.00 0.00 32.36 2.32
2283 2361 7.882271 AGTCTTCTCTTCACTAAGCAATTCATT 59.118 33.333 0.00 0.00 32.36 2.57
2284 2362 7.393216 AGTCTTCTCTTCACTAAGCAATTCAT 58.607 34.615 0.00 0.00 32.36 2.57
2285 2363 6.763355 AGTCTTCTCTTCACTAAGCAATTCA 58.237 36.000 0.00 0.00 32.36 2.57
2286 2364 7.665561 AAGTCTTCTCTTCACTAAGCAATTC 57.334 36.000 0.00 0.00 32.36 2.17
2287 2365 9.561069 TTTAAGTCTTCTCTTCACTAAGCAATT 57.439 29.630 0.00 0.00 32.36 2.32
2288 2366 9.732130 ATTTAAGTCTTCTCTTCACTAAGCAAT 57.268 29.630 0.00 0.00 32.36 3.56
2289 2367 8.993121 CATTTAAGTCTTCTCTTCACTAAGCAA 58.007 33.333 0.00 0.00 32.36 3.91
2290 2368 8.150945 ACATTTAAGTCTTCTCTTCACTAAGCA 58.849 33.333 0.00 0.00 32.36 3.91
2291 2369 8.541133 ACATTTAAGTCTTCTCTTCACTAAGC 57.459 34.615 0.00 0.00 32.36 3.09
2295 2373 7.550906 GCCATACATTTAAGTCTTCTCTTCACT 59.449 37.037 0.00 0.00 0.00 3.41
2296 2374 7.550906 AGCCATACATTTAAGTCTTCTCTTCAC 59.449 37.037 0.00 0.00 0.00 3.18
2297 2375 7.624549 AGCCATACATTTAAGTCTTCTCTTCA 58.375 34.615 0.00 0.00 0.00 3.02
2298 2376 8.499403 AAGCCATACATTTAAGTCTTCTCTTC 57.501 34.615 0.00 0.00 0.00 2.87
2299 2377 9.384764 GTAAGCCATACATTTAAGTCTTCTCTT 57.615 33.333 0.00 0.00 34.46 2.85
2300 2378 8.763601 AGTAAGCCATACATTTAAGTCTTCTCT 58.236 33.333 0.00 0.00 36.94 3.10
2301 2379 8.821894 CAGTAAGCCATACATTTAAGTCTTCTC 58.178 37.037 0.00 0.00 36.94 2.87
2302 2380 8.540388 TCAGTAAGCCATACATTTAAGTCTTCT 58.460 33.333 0.00 0.00 36.94 2.85
2303 2381 8.718102 TCAGTAAGCCATACATTTAAGTCTTC 57.282 34.615 0.00 0.00 36.94 2.87
2304 2382 7.770897 CCTCAGTAAGCCATACATTTAAGTCTT 59.229 37.037 0.68 0.00 36.94 3.01
2305 2383 7.125811 TCCTCAGTAAGCCATACATTTAAGTCT 59.874 37.037 0.68 0.00 36.94 3.24
2306 2384 7.224949 GTCCTCAGTAAGCCATACATTTAAGTC 59.775 40.741 0.68 0.00 36.94 3.01
2307 2385 7.048512 GTCCTCAGTAAGCCATACATTTAAGT 58.951 38.462 0.68 0.00 36.94 2.24
2308 2386 7.047891 TGTCCTCAGTAAGCCATACATTTAAG 58.952 38.462 0.68 0.00 36.94 1.85
2309 2387 6.953101 TGTCCTCAGTAAGCCATACATTTAA 58.047 36.000 0.68 0.00 36.94 1.52
2310 2388 6.553953 TGTCCTCAGTAAGCCATACATTTA 57.446 37.500 0.68 0.00 36.94 1.40
2311 2389 5.435686 TGTCCTCAGTAAGCCATACATTT 57.564 39.130 0.68 0.00 36.94 2.32
2312 2390 5.435686 TTGTCCTCAGTAAGCCATACATT 57.564 39.130 0.68 0.00 36.94 2.71
2313 2391 5.636903 ATTGTCCTCAGTAAGCCATACAT 57.363 39.130 0.68 0.00 36.94 2.29
2314 2392 6.553953 TTATTGTCCTCAGTAAGCCATACA 57.446 37.500 0.68 0.00 36.94 2.29
2315 2393 7.859325 TTTTATTGTCCTCAGTAAGCCATAC 57.141 36.000 0.00 0.00 29.90 2.39
2316 2394 9.778741 CTATTTTATTGTCCTCAGTAAGCCATA 57.221 33.333 0.00 0.00 29.90 2.74
2317 2395 8.494433 TCTATTTTATTGTCCTCAGTAAGCCAT 58.506 33.333 0.00 0.00 29.90 4.40
2318 2396 7.769044 GTCTATTTTATTGTCCTCAGTAAGCCA 59.231 37.037 0.00 0.00 29.90 4.75
2319 2397 7.769044 TGTCTATTTTATTGTCCTCAGTAAGCC 59.231 37.037 0.00 0.00 29.90 4.35
2320 2398 8.718102 TGTCTATTTTATTGTCCTCAGTAAGC 57.282 34.615 0.00 0.00 29.90 3.09


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.