Multiple sequence alignment - TraesCS5B01G327200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G327200 chr5B 100.000 3296 0 0 1 3296 511074375 511077670 0.000000e+00 6087.0
1 TraesCS5B01G327200 chr5B 80.455 880 127 24 391 1265 510883339 510884178 6.000000e-177 630.0
2 TraesCS5B01G327200 chr5B 83.178 107 18 0 1325 1431 110720889 110720995 7.530000e-17 99.0
3 TraesCS5B01G327200 chr5A 92.159 1607 91 19 391 1984 536884608 536886192 0.000000e+00 2237.0
4 TraesCS5B01G327200 chr5A 86.031 1081 114 15 1477 2541 536873074 536874133 0.000000e+00 1125.0
5 TraesCS5B01G327200 chr5A 92.776 526 36 2 2509 3033 536886631 536887155 0.000000e+00 760.0
6 TraesCS5B01G327200 chr5A 93.750 448 28 0 2033 2480 536886191 536886638 0.000000e+00 673.0
7 TraesCS5B01G327200 chr5A 79.977 884 127 25 391 1265 536772128 536772970 1.010000e-169 606.0
8 TraesCS5B01G327200 chr5A 92.328 378 26 3 2658 3033 536891490 536891866 4.840000e-148 534.0
9 TraesCS5B01G327200 chr5A 91.696 289 23 1 1 288 536884322 536884610 1.840000e-107 399.0
10 TraesCS5B01G327200 chr5A 80.989 526 78 17 1550 2059 536772998 536773517 6.630000e-107 398.0
11 TraesCS5B01G327200 chr5A 91.960 199 16 0 560 758 536872320 536872518 2.500000e-71 279.0
12 TraesCS5B01G327200 chr5A 96.396 111 4 0 286 396 69844788 69844898 2.020000e-42 183.0
13 TraesCS5B01G327200 chr5A 94.828 116 6 0 285 400 581101714 581101829 7.270000e-42 182.0
14 TraesCS5B01G327200 chr5A 92.562 121 9 0 272 392 442722818 442722938 1.220000e-39 174.0
15 TraesCS5B01G327200 chr5A 84.545 110 17 0 1325 1434 395300611 395300502 3.480000e-20 110.0
16 TraesCS5B01G327200 chr5D 92.141 1018 61 10 2033 3033 423374985 423376000 0.000000e+00 1419.0
17 TraesCS5B01G327200 chr5D 95.315 555 26 0 1430 1984 423374432 423374986 0.000000e+00 881.0
18 TraesCS5B01G327200 chr5D 80.524 878 128 23 391 1265 423266336 423267173 4.640000e-178 634.0
19 TraesCS5B01G327200 chr5D 89.227 427 39 5 909 1331 423373977 423374400 8.100000e-146 527.0
20 TraesCS5B01G327200 chr5D 83.645 428 55 10 1550 1967 423267202 423267624 3.990000e-104 388.0
21 TraesCS5B01G327200 chr5D 93.684 190 12 0 564 753 423373688 423373877 5.380000e-73 285.0
22 TraesCS5B01G327200 chr5D 92.105 152 11 1 1 151 423372986 423373137 2.580000e-51 213.0
23 TraesCS5B01G327200 chr5D 90.769 65 6 0 224 288 423373158 423373222 1.630000e-13 87.9
24 TraesCS5B01G327200 chr1B 79.077 325 54 7 1610 1927 17684774 17685091 9.270000e-51 211.0
25 TraesCS5B01G327200 chr1D 78.370 319 55 8 1616 1927 11852516 11852827 9.330000e-46 195.0
26 TraesCS5B01G327200 chr1D 92.063 126 8 1 286 409 420110 419985 3.380000e-40 176.0
27 TraesCS5B01G327200 chr7A 95.614 114 5 0 284 397 269960318 269960431 2.020000e-42 183.0
28 TraesCS5B01G327200 chr7A 92.683 123 8 1 271 393 133053215 133053336 3.380000e-40 176.0
29 TraesCS5B01G327200 chr3D 97.222 108 3 0 286 393 572127537 572127430 2.020000e-42 183.0
30 TraesCS5B01G327200 chr3D 93.333 120 6 2 286 404 98597599 98597481 3.380000e-40 176.0
31 TraesCS5B01G327200 chr6A 94.828 116 6 0 286 401 250834622 250834507 7.270000e-42 182.0
32 TraesCS5B01G327200 chr2A 85.455 110 10 6 1323 1429 727238774 727238668 3.480000e-20 110.0
33 TraesCS5B01G327200 chr2A 84.314 102 14 2 1333 1433 67551443 67551343 7.530000e-17 99.0
34 TraesCS5B01G327200 chr2A 80.672 119 21 2 1320 1437 623149694 623149577 1.260000e-14 91.6
35 TraesCS5B01G327200 chr6D 84.821 112 11 6 1323 1431 391925987 391925879 1.250000e-19 108.0
36 TraesCS5B01G327200 chr2D 83.621 116 17 2 1317 1431 473292313 473292199 1.250000e-19 108.0
37 TraesCS5B01G327200 chr2D 80.672 119 21 2 1320 1437 480566686 480566569 1.260000e-14 91.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G327200 chr5B 511074375 511077670 3295 False 6087.000000 6087 100.000000 1 3296 1 chr5B.!!$F3 3295
1 TraesCS5B01G327200 chr5B 510883339 510884178 839 False 630.000000 630 80.455000 391 1265 1 chr5B.!!$F2 874
2 TraesCS5B01G327200 chr5A 536884322 536887155 2833 False 1017.250000 2237 92.595250 1 3033 4 chr5A.!!$F7 3032
3 TraesCS5B01G327200 chr5A 536872320 536874133 1813 False 702.000000 1125 88.995500 560 2541 2 chr5A.!!$F6 1981
4 TraesCS5B01G327200 chr5A 536772128 536773517 1389 False 502.000000 606 80.483000 391 2059 2 chr5A.!!$F5 1668
5 TraesCS5B01G327200 chr5D 423372986 423376000 3014 False 568.816667 1419 92.206833 1 3033 6 chr5D.!!$F2 3032
6 TraesCS5B01G327200 chr5D 423266336 423267624 1288 False 511.000000 634 82.084500 391 1967 2 chr5D.!!$F1 1576

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
152 154 0.178891 GCCCCATCCTCATCCTCCTA 60.179 60.0 0.00 0.0 0.00 2.94 F
316 318 0.458889 TCCGAATTACTTGTCGCGGG 60.459 55.0 6.13 0.0 39.24 6.13 F
1083 1392 0.466124 TGGTGGTGACGATGTTGTCA 59.534 50.0 0.00 0.0 46.15 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1273 1591 0.325203 ACCCCAAACAGCCACAAACT 60.325 50.0 0.00 0.0 0.00 2.66 R
1322 1642 1.439543 AATGGGATGGAGGGAGTAGC 58.560 55.0 0.00 0.0 0.00 3.58 R
2481 2840 0.179150 CTCGTCGAGAAGGAGCTTGG 60.179 60.0 17.52 0.0 33.45 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
152 154 0.178891 GCCCCATCCTCATCCTCCTA 60.179 60.000 0.00 0.00 0.00 2.94
164 166 2.522193 CTCCTAGGCGAGTCCCCC 60.522 72.222 2.96 0.00 34.51 5.40
165 167 3.352748 TCCTAGGCGAGTCCCCCA 61.353 66.667 2.96 0.00 34.51 4.96
195 197 2.588877 GCGCGGCCATCTATGTGT 60.589 61.111 8.83 0.00 0.00 3.72
219 221 1.709578 CCTCATCCCGGAGATCTTCA 58.290 55.000 0.73 0.00 37.05 3.02
228 230 1.112113 GGAGATCTTCACCTACGCCA 58.888 55.000 0.00 0.00 0.00 5.69
239 241 1.376812 CTACGCCACCAACTTCCCC 60.377 63.158 0.00 0.00 0.00 4.81
278 280 1.596203 GCAGAGCATCATAGCGCCA 60.596 57.895 2.29 0.00 40.15 5.69
292 294 2.269241 GCCAAGCGCCTACTCCTT 59.731 61.111 2.29 0.00 0.00 3.36
293 295 1.815840 GCCAAGCGCCTACTCCTTC 60.816 63.158 2.29 0.00 0.00 3.46
294 296 1.153349 CCAAGCGCCTACTCCTTCC 60.153 63.158 2.29 0.00 0.00 3.46
295 297 1.519455 CAAGCGCCTACTCCTTCCG 60.519 63.158 2.29 0.00 0.00 4.30
296 298 1.982938 AAGCGCCTACTCCTTCCGT 60.983 57.895 2.29 0.00 0.00 4.69
297 299 1.542187 AAGCGCCTACTCCTTCCGTT 61.542 55.000 2.29 0.00 0.00 4.44
298 300 1.518792 GCGCCTACTCCTTCCGTTC 60.519 63.158 0.00 0.00 0.00 3.95
299 301 1.141234 CGCCTACTCCTTCCGTTCC 59.859 63.158 0.00 0.00 0.00 3.62
300 302 1.141234 GCCTACTCCTTCCGTTCCG 59.859 63.158 0.00 0.00 0.00 4.30
301 303 1.318158 GCCTACTCCTTCCGTTCCGA 61.318 60.000 0.00 0.00 0.00 4.55
302 304 1.180029 CCTACTCCTTCCGTTCCGAA 58.820 55.000 0.00 0.00 0.00 4.30
303 305 1.755380 CCTACTCCTTCCGTTCCGAAT 59.245 52.381 0.00 0.00 0.00 3.34
304 306 2.167900 CCTACTCCTTCCGTTCCGAATT 59.832 50.000 0.00 0.00 0.00 2.17
305 307 3.382546 CCTACTCCTTCCGTTCCGAATTA 59.617 47.826 0.00 0.00 0.00 1.40
306 308 3.242549 ACTCCTTCCGTTCCGAATTAC 57.757 47.619 0.00 0.00 0.00 1.89
307 309 2.830321 ACTCCTTCCGTTCCGAATTACT 59.170 45.455 0.00 0.00 0.00 2.24
308 310 3.260128 ACTCCTTCCGTTCCGAATTACTT 59.740 43.478 0.00 0.00 0.00 2.24
309 311 3.592059 TCCTTCCGTTCCGAATTACTTG 58.408 45.455 0.00 0.00 0.00 3.16
310 312 3.007182 TCCTTCCGTTCCGAATTACTTGT 59.993 43.478 0.00 0.00 0.00 3.16
311 313 3.370061 CCTTCCGTTCCGAATTACTTGTC 59.630 47.826 0.00 0.00 0.00 3.18
312 314 2.598589 TCCGTTCCGAATTACTTGTCG 58.401 47.619 0.00 0.00 37.01 4.35
313 315 1.060122 CCGTTCCGAATTACTTGTCGC 59.940 52.381 0.00 0.00 35.93 5.19
314 316 1.266211 CGTTCCGAATTACTTGTCGCG 60.266 52.381 0.00 0.00 35.93 5.87
315 317 1.060122 GTTCCGAATTACTTGTCGCGG 59.940 52.381 6.13 0.00 40.06 6.46
316 318 0.458889 TCCGAATTACTTGTCGCGGG 60.459 55.000 6.13 0.00 39.24 6.13
317 319 0.738412 CCGAATTACTTGTCGCGGGT 60.738 55.000 6.13 3.16 35.93 5.28
318 320 1.469595 CCGAATTACTTGTCGCGGGTA 60.470 52.381 6.13 2.12 35.93 3.69
319 321 2.466846 CGAATTACTTGTCGCGGGTAT 58.533 47.619 6.13 0.00 0.00 2.73
320 322 3.550639 CCGAATTACTTGTCGCGGGTATA 60.551 47.826 6.13 0.00 35.93 1.47
321 323 3.667261 CGAATTACTTGTCGCGGGTATAG 59.333 47.826 6.13 0.00 0.00 1.31
322 324 4.555313 CGAATTACTTGTCGCGGGTATAGA 60.555 45.833 6.13 0.00 0.00 1.98
323 325 5.464030 AATTACTTGTCGCGGGTATAGAT 57.536 39.130 6.13 0.00 0.00 1.98
324 326 2.795175 ACTTGTCGCGGGTATAGATG 57.205 50.000 6.13 0.00 0.00 2.90
325 327 2.029623 ACTTGTCGCGGGTATAGATGT 58.970 47.619 6.13 0.00 0.00 3.06
326 328 3.216800 ACTTGTCGCGGGTATAGATGTA 58.783 45.455 6.13 0.00 0.00 2.29
327 329 3.825014 ACTTGTCGCGGGTATAGATGTAT 59.175 43.478 6.13 0.00 0.00 2.29
328 330 4.082895 ACTTGTCGCGGGTATAGATGTATC 60.083 45.833 6.13 0.00 0.00 2.24
329 331 3.682696 TGTCGCGGGTATAGATGTATCT 58.317 45.455 6.13 0.00 40.86 1.98
330 332 4.835678 TGTCGCGGGTATAGATGTATCTA 58.164 43.478 6.13 4.22 43.00 1.98
331 333 4.874396 TGTCGCGGGTATAGATGTATCTAG 59.126 45.833 6.13 0.00 42.20 2.43
332 334 5.114780 GTCGCGGGTATAGATGTATCTAGA 58.885 45.833 6.13 0.00 42.20 2.43
333 335 5.759273 GTCGCGGGTATAGATGTATCTAGAT 59.241 44.000 10.73 10.73 42.20 1.98
334 336 5.758784 TCGCGGGTATAGATGTATCTAGATG 59.241 44.000 15.79 0.00 42.20 2.90
335 337 5.527951 CGCGGGTATAGATGTATCTAGATGT 59.472 44.000 15.79 1.25 42.20 3.06
336 338 6.704937 CGCGGGTATAGATGTATCTAGATGTA 59.295 42.308 15.79 4.44 42.20 2.29
337 339 7.388224 CGCGGGTATAGATGTATCTAGATGTAT 59.612 40.741 15.79 9.11 42.20 2.29
338 340 9.069082 GCGGGTATAGATGTATCTAGATGTATT 57.931 37.037 15.79 0.00 42.20 1.89
363 365 9.667107 TTTTAGTTCTAGGTACATCCATTTCTG 57.333 33.333 0.00 0.00 39.02 3.02
364 366 5.675538 AGTTCTAGGTACATCCATTTCTGC 58.324 41.667 0.00 0.00 39.02 4.26
365 367 4.322080 TCTAGGTACATCCATTTCTGCG 57.678 45.455 0.00 0.00 39.02 5.18
366 368 3.958147 TCTAGGTACATCCATTTCTGCGA 59.042 43.478 0.00 0.00 39.02 5.10
367 369 2.906354 AGGTACATCCATTTCTGCGAC 58.094 47.619 0.00 0.00 39.02 5.19
368 370 1.593006 GGTACATCCATTTCTGCGACG 59.407 52.381 0.00 0.00 35.97 5.12
369 371 2.536365 GTACATCCATTTCTGCGACGA 58.464 47.619 0.00 0.00 0.00 4.20
370 372 1.645034 ACATCCATTTCTGCGACGAG 58.355 50.000 0.00 0.00 0.00 4.18
371 373 1.066858 ACATCCATTTCTGCGACGAGT 60.067 47.619 0.00 0.00 0.00 4.18
372 374 2.165641 ACATCCATTTCTGCGACGAGTA 59.834 45.455 0.00 0.00 0.00 2.59
373 375 3.186909 CATCCATTTCTGCGACGAGTAA 58.813 45.455 0.00 0.00 0.00 2.24
374 376 3.520290 TCCATTTCTGCGACGAGTAAT 57.480 42.857 0.00 0.00 0.00 1.89
375 377 3.857052 TCCATTTCTGCGACGAGTAATT 58.143 40.909 0.00 0.00 0.00 1.40
376 378 4.250464 TCCATTTCTGCGACGAGTAATTT 58.750 39.130 0.00 0.00 0.00 1.82
377 379 4.092821 TCCATTTCTGCGACGAGTAATTTG 59.907 41.667 0.00 0.00 0.00 2.32
378 380 4.334443 CATTTCTGCGACGAGTAATTTGG 58.666 43.478 0.00 0.00 0.00 3.28
379 381 3.306917 TTCTGCGACGAGTAATTTGGA 57.693 42.857 0.00 0.00 0.00 3.53
380 382 3.306917 TCTGCGACGAGTAATTTGGAA 57.693 42.857 0.00 0.00 0.00 3.53
381 383 2.991190 TCTGCGACGAGTAATTTGGAAC 59.009 45.455 0.00 0.00 0.00 3.62
382 384 1.722464 TGCGACGAGTAATTTGGAACG 59.278 47.619 0.00 0.00 0.00 3.95
383 385 1.060122 GCGACGAGTAATTTGGAACGG 59.940 52.381 0.00 0.00 0.00 4.44
384 386 2.598589 CGACGAGTAATTTGGAACGGA 58.401 47.619 0.00 0.00 0.00 4.69
385 387 2.597305 CGACGAGTAATTTGGAACGGAG 59.403 50.000 0.00 0.00 0.00 4.63
386 388 2.928116 GACGAGTAATTTGGAACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
387 389 2.277084 CGAGTAATTTGGAACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
388 390 2.093869 CGAGTAATTTGGAACGGAGGGA 60.094 50.000 0.00 0.00 0.00 4.20
389 391 3.532542 GAGTAATTTGGAACGGAGGGAG 58.467 50.000 0.00 0.00 0.00 4.30
411 413 2.653087 ATCTCAGCAGCCACGCTCA 61.653 57.895 0.00 0.00 41.38 4.26
461 463 1.745489 CTACAAGTTCGGGCTGGGC 60.745 63.158 0.00 0.00 0.00 5.36
505 507 2.103042 GCGTCAGCTGGTGGATCAC 61.103 63.158 15.13 1.26 41.01 3.06
536 538 2.531912 GCAGTTCGTCTACATCATCACG 59.468 50.000 0.00 0.00 0.00 4.35
546 548 2.725312 ATCATCACGAGCAGCCGGT 61.725 57.895 1.90 0.00 0.00 5.28
621 918 3.243839 GCCTGAATTTTTGAAGCTGTCCA 60.244 43.478 0.00 0.00 0.00 4.02
647 944 0.677098 CTGCTGTCATGCTCTGCCTT 60.677 55.000 13.51 0.00 0.00 4.35
649 946 1.654954 GCTGTCATGCTCTGCCTTGG 61.655 60.000 7.83 0.00 0.00 3.61
662 959 1.497286 TGCCTTGGGACTTGGTACTTT 59.503 47.619 0.00 0.00 0.00 2.66
663 960 2.091555 TGCCTTGGGACTTGGTACTTTT 60.092 45.455 0.00 0.00 0.00 2.27
687 984 2.032376 TCGTGCTCATTGCTGGCA 59.968 55.556 0.00 0.00 43.37 4.92
710 1007 1.303643 CAAGGACCCTGAACTGGCC 60.304 63.158 0.00 0.00 0.00 5.36
798 1099 3.058293 TGATTGTCGCCATTGTTCAGAAC 60.058 43.478 6.32 6.32 0.00 3.01
803 1104 3.003275 GTCGCCATTGTTCAGAACTTCAA 59.997 43.478 14.51 1.20 0.00 2.69
844 1148 4.576216 TTCTGTTGTGTTTGTGTGTGTT 57.424 36.364 0.00 0.00 0.00 3.32
845 1149 4.576216 TCTGTTGTGTTTGTGTGTGTTT 57.424 36.364 0.00 0.00 0.00 2.83
846 1150 4.294232 TCTGTTGTGTTTGTGTGTGTTTG 58.706 39.130 0.00 0.00 0.00 2.93
847 1151 2.797156 TGTTGTGTTTGTGTGTGTTTGC 59.203 40.909 0.00 0.00 0.00 3.68
848 1152 2.797156 GTTGTGTTTGTGTGTGTTTGCA 59.203 40.909 0.00 0.00 0.00 4.08
849 1153 2.398498 TGTGTTTGTGTGTGTTTGCAC 58.602 42.857 0.00 0.00 45.44 4.57
850 1154 2.035193 TGTGTTTGTGTGTGTTTGCACT 59.965 40.909 0.00 0.00 45.44 4.40
1083 1392 0.466124 TGGTGGTGACGATGTTGTCA 59.534 50.000 0.00 0.00 46.15 3.58
1152 1461 9.618890 AATGATTACATCAGCTACATTTACACT 57.381 29.630 0.00 0.00 43.53 3.55
1209 1518 2.219875 CCCACTCCTGGCACTCACT 61.220 63.158 0.00 0.00 36.00 3.41
1226 1535 5.468072 CACTCACTATAATCCTCAATGGCAC 59.532 44.000 0.00 0.00 35.26 5.01
1257 1569 7.177568 CCAGTGCTATCAGGTATACTAGAACAT 59.822 40.741 2.25 0.00 0.00 2.71
1273 1591 8.423906 ACTAGAACATAAAGAGAGAGTCCAAA 57.576 34.615 0.00 0.00 0.00 3.28
1352 1676 3.013921 TCCATCCCATTTTAGTTGTCGC 58.986 45.455 0.00 0.00 0.00 5.19
1379 1703 7.254795 GCAAACGGATGTATCTAGCACTAAAAT 60.255 37.037 0.00 0.00 0.00 1.82
1381 1705 8.813643 AACGGATGTATCTAGCACTAAAATAC 57.186 34.615 0.00 4.20 0.00 1.89
1382 1706 7.082602 ACGGATGTATCTAGCACTAAAATACG 58.917 38.462 0.00 0.00 0.00 3.06
1383 1707 6.033619 CGGATGTATCTAGCACTAAAATACGC 59.966 42.308 0.00 0.00 0.00 4.42
1384 1708 6.033619 GGATGTATCTAGCACTAAAATACGCG 59.966 42.308 3.53 3.53 0.00 6.01
1394 1719 6.921857 AGCACTAAAATACGCGTAGATACATT 59.078 34.615 24.78 10.92 0.00 2.71
1401 1726 8.987599 AAATACGCGTAGATACATTCATTTTG 57.012 30.769 24.78 0.00 0.00 2.44
1403 1728 6.656314 ACGCGTAGATACATTCATTTTGAA 57.344 33.333 11.67 0.00 41.09 2.69
1424 1749 5.943416 TGAAGACAAATAACATTGGACGGAT 59.057 36.000 0.00 0.00 34.56 4.18
1471 1796 2.355716 GCTAAATACCAGTGGCCTCACA 60.356 50.000 9.78 0.00 45.91 3.58
1528 1853 5.009010 CACTGAACATAAGCCTTTTGTCACT 59.991 40.000 0.92 0.00 0.00 3.41
1879 2227 4.030216 TGGAGGTACATTGATGCAGACTA 58.970 43.478 0.00 0.00 0.00 2.59
1906 2254 1.064825 AGTGTGGGTTACCTTGAGGG 58.935 55.000 0.00 0.00 40.27 4.30
1997 2347 6.677431 GCCACAATGAATTTCTCTAAGCTCTG 60.677 42.308 0.00 0.00 0.00 3.35
2166 2520 3.960571 AGGGCATGCCATTATCATCTAC 58.039 45.455 36.56 15.43 37.98 2.59
2215 2569 6.758886 ACTAAGAGAAACATATTGCCTTCTCG 59.241 38.462 11.34 0.00 41.12 4.04
2224 2578 6.291377 ACATATTGCCTTCTCGTATGATTGT 58.709 36.000 0.00 0.00 0.00 2.71
2229 2583 4.202121 TGCCTTCTCGTATGATTGTAGGTC 60.202 45.833 0.00 0.00 0.00 3.85
2282 2636 4.020128 GGAAGACAAGACACCTCTATTGGT 60.020 45.833 0.00 0.00 41.77 3.67
2344 2698 1.697432 TGATCAACAGAGACGGGGTTT 59.303 47.619 0.00 0.00 0.00 3.27
2380 2734 6.094048 CGATCTCCCTGAAATGTGTAAAATGT 59.906 38.462 0.00 0.00 0.00 2.71
2407 2761 1.115467 GAGGGATGACCACGAGACAT 58.885 55.000 0.00 0.00 43.89 3.06
2432 2786 3.321968 AGGAAACCAGAAGACAAATTGCC 59.678 43.478 0.00 0.00 0.00 4.52
2473 2832 7.310361 GGGGGACTCATTTTATTTGTCATCAAA 60.310 37.037 0.00 0.00 45.71 2.69
2475 2834 9.657419 GGGACTCATTTTATTTGTCATCAAAAT 57.343 29.630 0.00 0.00 44.97 1.82
2480 2839 9.993454 TCATTTTATTTGTCATCAAAATCACCA 57.007 25.926 0.00 0.00 44.97 4.17
2482 2841 8.600449 TTTTATTTGTCATCAAAATCACCACC 57.400 30.769 0.00 0.00 44.97 4.61
2483 2842 5.804944 ATTTGTCATCAAAATCACCACCA 57.195 34.783 0.00 0.00 44.97 4.17
2484 2843 5.604758 TTTGTCATCAAAATCACCACCAA 57.395 34.783 0.00 0.00 40.08 3.67
2485 2844 4.852134 TGTCATCAAAATCACCACCAAG 57.148 40.909 0.00 0.00 0.00 3.61
2486 2845 3.005684 TGTCATCAAAATCACCACCAAGC 59.994 43.478 0.00 0.00 0.00 4.01
2487 2846 3.256631 GTCATCAAAATCACCACCAAGCT 59.743 43.478 0.00 0.00 0.00 3.74
2488 2847 3.507233 TCATCAAAATCACCACCAAGCTC 59.493 43.478 0.00 0.00 0.00 4.09
2489 2848 2.238521 TCAAAATCACCACCAAGCTCC 58.761 47.619 0.00 0.00 0.00 4.70
2490 2849 2.158475 TCAAAATCACCACCAAGCTCCT 60.158 45.455 0.00 0.00 0.00 3.69
2491 2850 2.629617 CAAAATCACCACCAAGCTCCTT 59.370 45.455 0.00 0.00 0.00 3.36
2492 2851 2.206576 AATCACCACCAAGCTCCTTC 57.793 50.000 0.00 0.00 0.00 3.46
2493 2852 1.366319 ATCACCACCAAGCTCCTTCT 58.634 50.000 0.00 0.00 0.00 2.85
2494 2853 0.687354 TCACCACCAAGCTCCTTCTC 59.313 55.000 0.00 0.00 0.00 2.87
2495 2854 0.671781 CACCACCAAGCTCCTTCTCG 60.672 60.000 0.00 0.00 0.00 4.04
2496 2855 0.832135 ACCACCAAGCTCCTTCTCGA 60.832 55.000 0.00 0.00 0.00 4.04
2497 2856 0.390472 CCACCAAGCTCCTTCTCGAC 60.390 60.000 0.00 0.00 0.00 4.20
2498 2857 0.734253 CACCAAGCTCCTTCTCGACG 60.734 60.000 0.00 0.00 0.00 5.12
2499 2858 0.894184 ACCAAGCTCCTTCTCGACGA 60.894 55.000 0.00 0.00 0.00 4.20
2500 2859 0.179150 CCAAGCTCCTTCTCGACGAG 60.179 60.000 18.91 18.91 0.00 4.18
2501 2860 0.179150 CAAGCTCCTTCTCGACGAGG 60.179 60.000 23.92 10.06 0.00 4.63
2502 2861 0.609681 AAGCTCCTTCTCGACGAGGT 60.610 55.000 23.92 1.62 35.96 3.85
2503 2862 1.137825 GCTCCTTCTCGACGAGGTG 59.862 63.158 23.92 16.02 0.00 4.00
2504 2863 1.587933 GCTCCTTCTCGACGAGGTGT 61.588 60.000 23.92 0.00 0.00 4.16
2505 2864 1.735386 CTCCTTCTCGACGAGGTGTA 58.265 55.000 23.92 2.27 0.00 2.90
2506 2865 1.666700 CTCCTTCTCGACGAGGTGTAG 59.333 57.143 23.92 15.15 0.00 2.74
2507 2866 1.002888 TCCTTCTCGACGAGGTGTAGT 59.997 52.381 23.92 0.00 0.00 2.73
2508 2867 2.234661 TCCTTCTCGACGAGGTGTAGTA 59.765 50.000 23.92 0.33 0.00 1.82
2509 2868 2.608546 CCTTCTCGACGAGGTGTAGTAG 59.391 54.545 23.92 10.05 0.00 2.57
2510 2869 3.260740 CTTCTCGACGAGGTGTAGTAGT 58.739 50.000 23.92 0.00 0.00 2.73
2587 2983 5.316167 TGTGCTTCAATGTCAAGATAGGTT 58.684 37.500 0.00 0.00 0.00 3.50
2635 3031 4.925646 GCAATTCTTCTGGTGGATGTTTTC 59.074 41.667 0.00 0.00 0.00 2.29
2744 3140 1.339631 TGGTTACCTCAAGCCGGATTG 60.340 52.381 26.35 26.35 33.51 2.67
2763 3174 6.166982 GGATTGGATCCTTGTAGTACTATGC 58.833 44.000 14.23 0.00 46.19 3.14
2816 3227 1.492176 CCATGGGAAGTATGGAGCTGT 59.508 52.381 2.85 0.00 46.42 4.40
2883 3294 3.213506 TGCCGGATCAAATAATGTGAGG 58.786 45.455 5.05 0.00 0.00 3.86
2889 3300 6.128172 CCGGATCAAATAATGTGAGGATTAGC 60.128 42.308 0.00 0.00 0.00 3.09
2907 3318 5.910637 TTAGCAACACAAAACTACTACCG 57.089 39.130 0.00 0.00 0.00 4.02
2956 3367 5.483811 TCCTACATACAAATGCACTTCGAA 58.516 37.500 0.00 0.00 36.50 3.71
2982 3393 6.403309 GCCCAACAAGATAGTAAAGCTACAAC 60.403 42.308 0.00 0.00 31.59 3.32
2983 3394 6.879458 CCCAACAAGATAGTAAAGCTACAACT 59.121 38.462 0.00 0.00 31.59 3.16
3005 3416 7.807977 ACTTAATAATGCAACTCATGTAGGG 57.192 36.000 0.00 0.00 35.13 3.53
3007 3418 7.716998 ACTTAATAATGCAACTCATGTAGGGAG 59.283 37.037 0.00 0.00 35.13 4.30
3008 3419 5.894298 ATAATGCAACTCATGTAGGGAGA 57.106 39.130 0.00 0.00 35.13 3.71
3009 3420 4.785346 AATGCAACTCATGTAGGGAGAT 57.215 40.909 0.00 0.00 35.13 2.75
3011 3422 4.944619 TGCAACTCATGTAGGGAGATAG 57.055 45.455 0.00 0.00 36.26 2.08
3012 3423 3.643320 TGCAACTCATGTAGGGAGATAGG 59.357 47.826 0.00 0.00 36.26 2.57
3013 3424 3.898123 GCAACTCATGTAGGGAGATAGGA 59.102 47.826 0.00 0.00 36.26 2.94
3017 3428 6.532119 ACTCATGTAGGGAGATAGGAGTAA 57.468 41.667 0.00 0.00 36.26 2.24
3046 3457 8.888579 ATTAAATAACTATCTGGAAGGTCACG 57.111 34.615 0.00 0.00 0.00 4.35
3047 3458 5.934402 AATAACTATCTGGAAGGTCACGT 57.066 39.130 0.00 0.00 0.00 4.49
3048 3459 7.414222 AAATAACTATCTGGAAGGTCACGTA 57.586 36.000 0.00 0.00 0.00 3.57
3049 3460 7.414222 AATAACTATCTGGAAGGTCACGTAA 57.586 36.000 0.00 0.00 0.00 3.18
3050 3461 5.934402 AACTATCTGGAAGGTCACGTAAT 57.066 39.130 0.00 0.00 0.00 1.89
3051 3462 5.517322 ACTATCTGGAAGGTCACGTAATC 57.483 43.478 0.00 0.00 0.00 1.75
3052 3463 5.202004 ACTATCTGGAAGGTCACGTAATCT 58.798 41.667 0.00 0.00 0.00 2.40
3053 3464 6.363065 ACTATCTGGAAGGTCACGTAATCTA 58.637 40.000 0.00 0.00 0.00 1.98
3054 3465 5.776173 ATCTGGAAGGTCACGTAATCTAG 57.224 43.478 0.00 0.00 0.00 2.43
3055 3466 3.380637 TCTGGAAGGTCACGTAATCTAGC 59.619 47.826 0.00 0.00 0.00 3.42
3056 3467 3.362706 TGGAAGGTCACGTAATCTAGCT 58.637 45.455 0.00 0.00 0.00 3.32
3057 3468 3.380637 TGGAAGGTCACGTAATCTAGCTC 59.619 47.826 0.00 0.00 0.00 4.09
3058 3469 3.380637 GGAAGGTCACGTAATCTAGCTCA 59.619 47.826 0.00 0.00 0.00 4.26
3059 3470 4.142227 GGAAGGTCACGTAATCTAGCTCAA 60.142 45.833 0.00 0.00 0.00 3.02
3060 3471 5.452077 GGAAGGTCACGTAATCTAGCTCAAT 60.452 44.000 0.00 0.00 0.00 2.57
3061 3472 6.238953 GGAAGGTCACGTAATCTAGCTCAATA 60.239 42.308 0.00 0.00 0.00 1.90
3062 3473 6.074544 AGGTCACGTAATCTAGCTCAATAC 57.925 41.667 0.00 0.00 0.00 1.89
3063 3474 5.828859 AGGTCACGTAATCTAGCTCAATACT 59.171 40.000 0.00 0.00 0.00 2.12
3064 3475 6.996879 AGGTCACGTAATCTAGCTCAATACTA 59.003 38.462 0.00 0.00 0.00 1.82
3065 3476 7.041235 AGGTCACGTAATCTAGCTCAATACTAC 60.041 40.741 0.00 0.00 0.00 2.73
3066 3477 6.791299 GTCACGTAATCTAGCTCAATACTACG 59.209 42.308 0.00 0.24 37.50 3.51
3067 3478 6.703165 TCACGTAATCTAGCTCAATACTACGA 59.297 38.462 15.51 0.00 35.91 3.43
3068 3479 7.010606 CACGTAATCTAGCTCAATACTACGAG 58.989 42.308 15.51 7.57 35.91 4.18
3069 3480 6.927936 ACGTAATCTAGCTCAATACTACGAGA 59.072 38.462 15.51 0.16 35.91 4.04
3070 3481 7.095691 ACGTAATCTAGCTCAATACTACGAGAC 60.096 40.741 15.51 0.00 35.91 3.36
3071 3482 7.116662 CGTAATCTAGCTCAATACTACGAGACT 59.883 40.741 0.00 0.00 34.35 3.24
3072 3483 7.811117 AATCTAGCTCAATACTACGAGACTT 57.189 36.000 0.00 0.00 0.00 3.01
3073 3484 6.606234 TCTAGCTCAATACTACGAGACTTG 57.394 41.667 0.00 0.00 0.00 3.16
3074 3485 6.114089 TCTAGCTCAATACTACGAGACTTGT 58.886 40.000 0.00 0.00 0.00 3.16
3075 3486 5.238006 AGCTCAATACTACGAGACTTGTC 57.762 43.478 0.00 0.00 0.00 3.18
3076 3487 4.029704 GCTCAATACTACGAGACTTGTCG 58.970 47.826 0.00 0.00 45.76 4.35
3091 3502 1.946745 TGTCGTCAACAAGCATGTCA 58.053 45.000 0.00 0.00 39.40 3.58
3092 3503 2.493035 TGTCGTCAACAAGCATGTCAT 58.507 42.857 0.00 0.00 39.40 3.06
3093 3504 2.480037 TGTCGTCAACAAGCATGTCATC 59.520 45.455 0.00 0.00 39.40 2.92
3094 3505 2.738846 GTCGTCAACAAGCATGTCATCT 59.261 45.455 0.00 0.00 39.40 2.90
3095 3506 3.187227 GTCGTCAACAAGCATGTCATCTT 59.813 43.478 0.00 0.00 39.40 2.40
3096 3507 4.388773 GTCGTCAACAAGCATGTCATCTTA 59.611 41.667 0.00 0.00 39.40 2.10
3097 3508 4.388773 TCGTCAACAAGCATGTCATCTTAC 59.611 41.667 0.00 0.00 39.40 2.34
3098 3509 4.389992 CGTCAACAAGCATGTCATCTTACT 59.610 41.667 0.00 0.00 39.40 2.24
3099 3510 5.106948 CGTCAACAAGCATGTCATCTTACTT 60.107 40.000 0.00 0.00 39.40 2.24
3100 3511 6.310197 GTCAACAAGCATGTCATCTTACTTC 58.690 40.000 0.00 0.00 39.40 3.01
3101 3512 6.148480 GTCAACAAGCATGTCATCTTACTTCT 59.852 38.462 0.00 0.00 39.40 2.85
3102 3513 6.369890 TCAACAAGCATGTCATCTTACTTCTC 59.630 38.462 0.00 0.00 39.40 2.87
3103 3514 5.798132 ACAAGCATGTCATCTTACTTCTCA 58.202 37.500 0.00 0.00 33.41 3.27
3104 3515 6.413052 ACAAGCATGTCATCTTACTTCTCAT 58.587 36.000 0.00 0.00 33.41 2.90
3105 3516 6.883217 ACAAGCATGTCATCTTACTTCTCATT 59.117 34.615 0.00 0.00 33.41 2.57
3106 3517 6.922247 AGCATGTCATCTTACTTCTCATTG 57.078 37.500 0.00 0.00 0.00 2.82
3107 3518 6.413052 AGCATGTCATCTTACTTCTCATTGT 58.587 36.000 0.00 0.00 0.00 2.71
3108 3519 6.538021 AGCATGTCATCTTACTTCTCATTGTC 59.462 38.462 0.00 0.00 0.00 3.18
3109 3520 6.538021 GCATGTCATCTTACTTCTCATTGTCT 59.462 38.462 0.00 0.00 0.00 3.41
3110 3521 7.708322 GCATGTCATCTTACTTCTCATTGTCTA 59.292 37.037 0.00 0.00 0.00 2.59
3111 3522 9.247126 CATGTCATCTTACTTCTCATTGTCTAG 57.753 37.037 0.00 0.00 0.00 2.43
3112 3523 8.581253 TGTCATCTTACTTCTCATTGTCTAGA 57.419 34.615 0.00 0.00 0.00 2.43
3113 3524 9.025041 TGTCATCTTACTTCTCATTGTCTAGAA 57.975 33.333 0.00 0.00 0.00 2.10
3122 3533 8.074474 CTTCTCATTGTCTAGAAGTGCATATG 57.926 38.462 0.00 0.00 42.41 1.78
3123 3534 5.987953 TCTCATTGTCTAGAAGTGCATATGC 59.012 40.000 21.09 21.09 42.50 3.14
3124 3535 5.922053 TCATTGTCTAGAAGTGCATATGCT 58.078 37.500 27.13 8.49 42.66 3.79
3125 3536 5.987953 TCATTGTCTAGAAGTGCATATGCTC 59.012 40.000 27.13 23.30 42.66 4.26
3126 3537 5.604758 TTGTCTAGAAGTGCATATGCTCT 57.395 39.130 27.13 25.10 45.55 4.09
3127 3538 4.941657 TGTCTAGAAGTGCATATGCTCTG 58.058 43.478 27.85 17.40 43.19 3.35
3128 3539 4.403752 TGTCTAGAAGTGCATATGCTCTGT 59.596 41.667 27.85 21.00 43.19 3.41
3129 3540 5.594317 TGTCTAGAAGTGCATATGCTCTGTA 59.406 40.000 27.85 20.99 43.19 2.74
3130 3541 6.148948 GTCTAGAAGTGCATATGCTCTGTAG 58.851 44.000 27.85 26.72 43.19 2.74
3143 3554 2.805845 CTCTGTAGCAAATTGGCATGC 58.194 47.619 9.90 9.90 42.87 4.06
3144 3555 2.164827 CTCTGTAGCAAATTGGCATGCA 59.835 45.455 21.36 0.00 44.95 3.96
3145 3556 2.094597 TCTGTAGCAAATTGGCATGCAC 60.095 45.455 21.36 9.64 44.95 4.57
3146 3557 1.270971 GTAGCAAATTGGCATGCACG 58.729 50.000 21.36 1.46 44.95 5.34
3147 3558 0.458197 TAGCAAATTGGCATGCACGC 60.458 50.000 21.36 11.61 44.95 5.34
3148 3559 1.738830 GCAAATTGGCATGCACGCT 60.739 52.632 21.36 0.00 42.12 5.07
3149 3560 1.293267 GCAAATTGGCATGCACGCTT 61.293 50.000 21.36 4.23 42.12 4.68
3150 3561 0.717224 CAAATTGGCATGCACGCTTC 59.283 50.000 21.36 0.64 0.00 3.86
3151 3562 0.604578 AAATTGGCATGCACGCTTCT 59.395 45.000 21.36 0.00 0.00 2.85
3152 3563 0.604578 AATTGGCATGCACGCTTCTT 59.395 45.000 21.36 0.00 0.00 2.52
3153 3564 0.108992 ATTGGCATGCACGCTTCTTG 60.109 50.000 21.36 0.00 0.00 3.02
3154 3565 1.454572 TTGGCATGCACGCTTCTTGT 61.455 50.000 21.36 0.00 0.00 3.16
3155 3566 1.286880 GGCATGCACGCTTCTTGTT 59.713 52.632 21.36 0.00 0.00 2.83
3156 3567 0.318955 GGCATGCACGCTTCTTGTTT 60.319 50.000 21.36 0.00 0.00 2.83
3157 3568 1.490621 GCATGCACGCTTCTTGTTTT 58.509 45.000 14.21 0.00 0.00 2.43
3158 3569 1.190763 GCATGCACGCTTCTTGTTTTG 59.809 47.619 14.21 0.00 0.00 2.44
3159 3570 2.462889 CATGCACGCTTCTTGTTTTGT 58.537 42.857 0.00 0.00 0.00 2.83
3160 3571 1.906757 TGCACGCTTCTTGTTTTGTG 58.093 45.000 0.00 0.00 0.00 3.33
3161 3572 0.572125 GCACGCTTCTTGTTTTGTGC 59.428 50.000 0.00 0.00 44.72 4.57
3162 3573 1.798813 GCACGCTTCTTGTTTTGTGCT 60.799 47.619 7.80 0.00 46.69 4.40
3163 3574 2.529151 CACGCTTCTTGTTTTGTGCTT 58.471 42.857 0.00 0.00 0.00 3.91
3164 3575 2.923020 CACGCTTCTTGTTTTGTGCTTT 59.077 40.909 0.00 0.00 0.00 3.51
3165 3576 3.367630 CACGCTTCTTGTTTTGTGCTTTT 59.632 39.130 0.00 0.00 0.00 2.27
3166 3577 3.612423 ACGCTTCTTGTTTTGTGCTTTTC 59.388 39.130 0.00 0.00 0.00 2.29
3167 3578 3.000222 CGCTTCTTGTTTTGTGCTTTTCC 60.000 43.478 0.00 0.00 0.00 3.13
3168 3579 4.183865 GCTTCTTGTTTTGTGCTTTTCCT 58.816 39.130 0.00 0.00 0.00 3.36
3169 3580 4.268644 GCTTCTTGTTTTGTGCTTTTCCTC 59.731 41.667 0.00 0.00 0.00 3.71
3170 3581 5.654497 CTTCTTGTTTTGTGCTTTTCCTCT 58.346 37.500 0.00 0.00 0.00 3.69
3171 3582 5.659440 TCTTGTTTTGTGCTTTTCCTCTT 57.341 34.783 0.00 0.00 0.00 2.85
3172 3583 5.650543 TCTTGTTTTGTGCTTTTCCTCTTC 58.349 37.500 0.00 0.00 0.00 2.87
3173 3584 4.027572 TGTTTTGTGCTTTTCCTCTTCG 57.972 40.909 0.00 0.00 0.00 3.79
3174 3585 3.692101 TGTTTTGTGCTTTTCCTCTTCGA 59.308 39.130 0.00 0.00 0.00 3.71
3175 3586 4.201910 TGTTTTGTGCTTTTCCTCTTCGAG 60.202 41.667 0.00 0.00 0.00 4.04
3176 3587 2.910688 TGTGCTTTTCCTCTTCGAGT 57.089 45.000 0.00 0.00 0.00 4.18
3177 3588 3.194005 TGTGCTTTTCCTCTTCGAGTT 57.806 42.857 0.00 0.00 0.00 3.01
3178 3589 2.872245 TGTGCTTTTCCTCTTCGAGTTG 59.128 45.455 0.00 0.00 0.00 3.16
3179 3590 3.131396 GTGCTTTTCCTCTTCGAGTTGA 58.869 45.455 0.00 0.00 0.00 3.18
3180 3591 3.059529 GTGCTTTTCCTCTTCGAGTTGAC 60.060 47.826 0.00 0.00 0.00 3.18
3181 3592 3.181465 TGCTTTTCCTCTTCGAGTTGACT 60.181 43.478 0.00 0.00 0.00 3.41
3182 3593 4.038763 TGCTTTTCCTCTTCGAGTTGACTA 59.961 41.667 0.00 0.00 0.00 2.59
3183 3594 5.172205 GCTTTTCCTCTTCGAGTTGACTAT 58.828 41.667 0.00 0.00 0.00 2.12
3184 3595 6.071560 TGCTTTTCCTCTTCGAGTTGACTATA 60.072 38.462 0.00 0.00 0.00 1.31
3185 3596 6.981559 GCTTTTCCTCTTCGAGTTGACTATAT 59.018 38.462 0.00 0.00 0.00 0.86
3186 3597 7.043059 GCTTTTCCTCTTCGAGTTGACTATATG 60.043 40.741 0.00 0.00 0.00 1.78
3187 3598 7.406031 TTTCCTCTTCGAGTTGACTATATGT 57.594 36.000 0.00 0.00 0.00 2.29
3188 3599 8.515695 TTTCCTCTTCGAGTTGACTATATGTA 57.484 34.615 0.00 0.00 0.00 2.29
3189 3600 7.493743 TCCTCTTCGAGTTGACTATATGTAC 57.506 40.000 0.00 0.00 0.00 2.90
3190 3601 7.052248 TCCTCTTCGAGTTGACTATATGTACA 58.948 38.462 0.00 0.00 0.00 2.90
3191 3602 7.226918 TCCTCTTCGAGTTGACTATATGTACAG 59.773 40.741 0.33 0.00 0.00 2.74
3192 3603 6.726230 TCTTCGAGTTGACTATATGTACAGC 58.274 40.000 0.33 0.00 0.00 4.40
3193 3604 6.542735 TCTTCGAGTTGACTATATGTACAGCT 59.457 38.462 0.33 0.00 0.00 4.24
3194 3605 6.301687 TCGAGTTGACTATATGTACAGCTC 57.698 41.667 0.33 0.00 37.29 4.09
3195 3606 5.820947 TCGAGTTGACTATATGTACAGCTCA 59.179 40.000 0.33 0.00 39.37 4.26
3196 3607 6.317893 TCGAGTTGACTATATGTACAGCTCAA 59.682 38.462 0.33 1.04 39.37 3.02
3197 3608 6.634837 CGAGTTGACTATATGTACAGCTCAAG 59.365 42.308 0.33 0.00 39.37 3.02
3198 3609 6.276847 AGTTGACTATATGTACAGCTCAAGC 58.723 40.000 0.33 0.00 42.49 4.01
3199 3610 5.852282 TGACTATATGTACAGCTCAAGCA 57.148 39.130 0.33 0.00 45.16 3.91
3200 3611 6.220726 TGACTATATGTACAGCTCAAGCAA 57.779 37.500 0.33 0.00 45.16 3.91
3201 3612 6.639563 TGACTATATGTACAGCTCAAGCAAA 58.360 36.000 0.33 0.00 45.16 3.68
3202 3613 6.758416 TGACTATATGTACAGCTCAAGCAAAG 59.242 38.462 0.33 0.00 45.16 2.77
3203 3614 6.051717 ACTATATGTACAGCTCAAGCAAAGG 58.948 40.000 0.33 0.00 45.16 3.11
3204 3615 1.238439 TGTACAGCTCAAGCAAAGGC 58.762 50.000 4.59 0.00 45.16 4.35
3205 3616 0.523519 GTACAGCTCAAGCAAAGGCC 59.476 55.000 4.59 0.00 45.16 5.19
3206 3617 0.401738 TACAGCTCAAGCAAAGGCCT 59.598 50.000 0.00 0.00 45.16 5.19
3207 3618 0.401738 ACAGCTCAAGCAAAGGCCTA 59.598 50.000 5.16 0.00 45.16 3.93
3208 3619 1.093159 CAGCTCAAGCAAAGGCCTAG 58.907 55.000 5.16 2.49 45.16 3.02
3209 3620 0.034670 AGCTCAAGCAAAGGCCTAGG 60.035 55.000 5.16 3.67 45.16 3.02
3210 3621 0.322906 GCTCAAGCAAAGGCCTAGGT 60.323 55.000 5.16 4.52 42.56 3.08
3211 3622 1.065418 GCTCAAGCAAAGGCCTAGGTA 60.065 52.381 5.16 0.00 42.56 3.08
3212 3623 2.422093 GCTCAAGCAAAGGCCTAGGTAT 60.422 50.000 5.16 0.00 42.56 2.73
3213 3624 3.891049 CTCAAGCAAAGGCCTAGGTATT 58.109 45.455 5.16 2.53 42.56 1.89
3214 3625 3.879892 CTCAAGCAAAGGCCTAGGTATTC 59.120 47.826 5.16 0.00 42.56 1.75
3215 3626 3.265737 TCAAGCAAAGGCCTAGGTATTCA 59.734 43.478 5.16 0.00 42.56 2.57
3216 3627 4.016444 CAAGCAAAGGCCTAGGTATTCAA 58.984 43.478 5.16 0.00 42.56 2.69
3217 3628 4.526438 AGCAAAGGCCTAGGTATTCAAT 57.474 40.909 5.16 0.00 42.56 2.57
3218 3629 5.646692 AGCAAAGGCCTAGGTATTCAATA 57.353 39.130 5.16 0.00 42.56 1.90
3219 3630 5.625150 AGCAAAGGCCTAGGTATTCAATAG 58.375 41.667 5.16 0.00 42.56 1.73
3220 3631 5.132816 AGCAAAGGCCTAGGTATTCAATAGT 59.867 40.000 5.16 0.00 42.56 2.12
3221 3632 5.828328 GCAAAGGCCTAGGTATTCAATAGTT 59.172 40.000 5.16 0.00 0.00 2.24
3222 3633 6.238759 GCAAAGGCCTAGGTATTCAATAGTTG 60.239 42.308 5.16 2.26 0.00 3.16
3223 3634 6.576778 AAGGCCTAGGTATTCAATAGTTGT 57.423 37.500 5.16 0.00 0.00 3.32
3224 3635 7.685849 AAGGCCTAGGTATTCAATAGTTGTA 57.314 36.000 5.16 0.00 0.00 2.41
3225 3636 7.685849 AGGCCTAGGTATTCAATAGTTGTAA 57.314 36.000 1.29 0.00 0.00 2.41
3226 3637 7.736893 AGGCCTAGGTATTCAATAGTTGTAAG 58.263 38.462 1.29 0.00 0.00 2.34
3227 3638 7.567622 AGGCCTAGGTATTCAATAGTTGTAAGA 59.432 37.037 1.29 0.00 0.00 2.10
3228 3639 7.656542 GGCCTAGGTATTCAATAGTTGTAAGAC 59.343 40.741 11.31 0.00 0.00 3.01
3229 3640 7.656542 GCCTAGGTATTCAATAGTTGTAAGACC 59.343 40.741 11.31 0.00 34.86 3.85
3230 3641 8.701895 CCTAGGTATTCAATAGTTGTAAGACCA 58.298 37.037 0.00 6.31 35.96 4.02
3233 3644 9.396022 AGGTATTCAATAGTTGTAAGACCAATG 57.604 33.333 14.75 0.00 35.96 2.82
3234 3645 8.129211 GGTATTCAATAGTTGTAAGACCAATGC 58.871 37.037 10.75 0.00 34.82 3.56
3235 3646 7.944729 ATTCAATAGTTGTAAGACCAATGCT 57.055 32.000 0.00 0.00 0.00 3.79
3236 3647 6.985188 TCAATAGTTGTAAGACCAATGCTC 57.015 37.500 0.00 0.00 0.00 4.26
3237 3648 6.711277 TCAATAGTTGTAAGACCAATGCTCT 58.289 36.000 0.00 0.00 0.00 4.09
3238 3649 6.595326 TCAATAGTTGTAAGACCAATGCTCTG 59.405 38.462 0.00 0.00 0.00 3.35
3239 3650 4.357918 AGTTGTAAGACCAATGCTCTGT 57.642 40.909 0.00 0.00 0.00 3.41
3240 3651 4.718961 AGTTGTAAGACCAATGCTCTGTT 58.281 39.130 0.00 0.00 0.00 3.16
3241 3652 4.516698 AGTTGTAAGACCAATGCTCTGTTG 59.483 41.667 0.00 0.00 0.00 3.33
3246 3657 3.362040 CCAATGCTCTGTTGGGGAA 57.638 52.632 0.00 0.00 41.90 3.97
3247 3658 0.890683 CCAATGCTCTGTTGGGGAAC 59.109 55.000 0.00 0.00 41.90 3.62
3248 3659 0.523072 CAATGCTCTGTTGGGGAACG 59.477 55.000 0.00 0.00 0.00 3.95
3249 3660 0.110486 AATGCTCTGTTGGGGAACGT 59.890 50.000 0.00 0.00 0.00 3.99
3250 3661 0.981183 ATGCTCTGTTGGGGAACGTA 59.019 50.000 0.00 0.00 0.00 3.57
3251 3662 0.320374 TGCTCTGTTGGGGAACGTAG 59.680 55.000 0.00 0.00 0.00 3.51
3253 3664 1.547372 GCTCTGTTGGGGAACGTAGTA 59.453 52.381 0.00 0.00 45.00 1.82
3254 3665 2.028748 GCTCTGTTGGGGAACGTAGTAA 60.029 50.000 0.00 0.00 45.00 2.24
3255 3666 3.369157 GCTCTGTTGGGGAACGTAGTAAT 60.369 47.826 0.00 0.00 45.00 1.89
3256 3667 4.828829 CTCTGTTGGGGAACGTAGTAATT 58.171 43.478 0.00 0.00 45.00 1.40
3257 3668 4.824289 TCTGTTGGGGAACGTAGTAATTC 58.176 43.478 0.00 0.00 45.00 2.17
3258 3669 4.283978 TCTGTTGGGGAACGTAGTAATTCA 59.716 41.667 0.00 0.00 45.00 2.57
3259 3670 4.970711 TGTTGGGGAACGTAGTAATTCAA 58.029 39.130 0.00 0.00 45.00 2.69
3260 3671 5.374921 TGTTGGGGAACGTAGTAATTCAAA 58.625 37.500 0.00 0.00 45.00 2.69
3261 3672 5.826737 TGTTGGGGAACGTAGTAATTCAAAA 59.173 36.000 0.00 0.00 45.00 2.44
3262 3673 6.320672 TGTTGGGGAACGTAGTAATTCAAAAA 59.679 34.615 0.00 0.00 45.00 1.94
3287 3698 8.928270 AAATTCCTACTATTAGAGTTGTGTCG 57.072 34.615 0.00 0.00 39.81 4.35
3288 3699 7.876936 ATTCCTACTATTAGAGTTGTGTCGA 57.123 36.000 0.00 0.00 39.81 4.20
3289 3700 7.692460 TTCCTACTATTAGAGTTGTGTCGAA 57.308 36.000 0.00 0.00 39.81 3.71
3290 3701 7.876936 TCCTACTATTAGAGTTGTGTCGAAT 57.123 36.000 0.00 0.00 39.81 3.34
3291 3702 8.969260 TCCTACTATTAGAGTTGTGTCGAATA 57.031 34.615 0.00 0.00 39.81 1.75
3292 3703 9.570468 TCCTACTATTAGAGTTGTGTCGAATAT 57.430 33.333 0.00 0.00 39.81 1.28
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
34 35 0.823356 ATGTCCAACTTGTTGGCGCT 60.823 50.000 23.47 10.11 41.81 5.92
64 65 0.667993 ACGGTGGAACTTTGCATGTG 59.332 50.000 0.00 0.00 36.74 3.21
73 74 2.031163 GAGCAGCACGGTGGAACT 59.969 61.111 10.60 0.00 36.74 3.01
152 154 2.041265 ATCTTGGGGGACTCGCCT 59.959 61.111 11.72 0.00 45.28 5.52
177 179 3.705638 CACATAGATGGCCGCGCG 61.706 66.667 25.67 25.67 0.00 6.86
178 180 1.300620 TACACATAGATGGCCGCGC 60.301 57.895 0.00 0.00 0.00 6.86
191 193 2.717044 CGGGATGAGGCCGTACACA 61.717 63.158 0.00 0.00 0.00 3.72
195 197 2.367586 ATCTCCGGGATGAGGCCGTA 62.368 60.000 0.00 0.00 32.69 4.02
210 212 1.202428 GGTGGCGTAGGTGAAGATCTC 60.202 57.143 0.00 0.00 0.00 2.75
219 221 1.373812 GGAAGTTGGTGGCGTAGGT 59.626 57.895 0.00 0.00 0.00 3.08
228 230 1.455822 TTCTGGATGGGGAAGTTGGT 58.544 50.000 0.00 0.00 0.00 3.67
239 241 2.479049 CGCCTGCAAGAATTTCTGGATG 60.479 50.000 4.91 0.00 34.07 3.51
278 280 1.542187 AACGGAAGGAGTAGGCGCTT 61.542 55.000 7.64 0.52 0.00 4.68
295 297 1.060122 CCGCGACAAGTAATTCGGAAC 59.940 52.381 8.23 0.00 39.23 3.62
296 298 1.352114 CCGCGACAAGTAATTCGGAA 58.648 50.000 8.23 0.00 39.23 4.30
297 299 0.458889 CCCGCGACAAGTAATTCGGA 60.459 55.000 8.23 0.00 39.23 4.55
298 300 0.738412 ACCCGCGACAAGTAATTCGG 60.738 55.000 8.23 0.00 35.73 4.30
299 301 1.912001 TACCCGCGACAAGTAATTCG 58.088 50.000 8.23 0.00 38.31 3.34
300 302 4.863491 TCTATACCCGCGACAAGTAATTC 58.137 43.478 8.23 0.00 0.00 2.17
301 303 4.924305 TCTATACCCGCGACAAGTAATT 57.076 40.909 8.23 0.00 0.00 1.40
302 304 4.280174 ACATCTATACCCGCGACAAGTAAT 59.720 41.667 8.23 0.00 0.00 1.89
303 305 3.633525 ACATCTATACCCGCGACAAGTAA 59.366 43.478 8.23 0.00 0.00 2.24
304 306 3.216800 ACATCTATACCCGCGACAAGTA 58.783 45.455 8.23 4.04 0.00 2.24
305 307 2.029623 ACATCTATACCCGCGACAAGT 58.970 47.619 8.23 1.45 0.00 3.16
306 308 2.795175 ACATCTATACCCGCGACAAG 57.205 50.000 8.23 0.00 0.00 3.16
307 309 4.077108 AGATACATCTATACCCGCGACAA 58.923 43.478 8.23 0.00 34.85 3.18
308 310 3.682696 AGATACATCTATACCCGCGACA 58.317 45.455 8.23 0.00 34.85 4.35
309 311 5.114780 TCTAGATACATCTATACCCGCGAC 58.885 45.833 8.23 0.00 38.60 5.19
310 312 5.349061 TCTAGATACATCTATACCCGCGA 57.651 43.478 8.23 0.00 38.60 5.87
311 313 5.527951 ACATCTAGATACATCTATACCCGCG 59.472 44.000 4.54 0.00 38.60 6.46
312 314 6.945938 ACATCTAGATACATCTATACCCGC 57.054 41.667 4.54 0.00 38.60 6.13
337 339 9.667107 CAGAAATGGATGTACCTAGAACTAAAA 57.333 33.333 0.00 0.00 39.86 1.52
338 340 7.769044 GCAGAAATGGATGTACCTAGAACTAAA 59.231 37.037 0.00 0.00 39.86 1.85
339 341 7.272978 GCAGAAATGGATGTACCTAGAACTAA 58.727 38.462 0.00 0.00 39.86 2.24
340 342 6.461092 CGCAGAAATGGATGTACCTAGAACTA 60.461 42.308 0.00 0.00 39.86 2.24
341 343 5.675538 GCAGAAATGGATGTACCTAGAACT 58.324 41.667 0.00 0.00 39.86 3.01
342 344 4.508124 CGCAGAAATGGATGTACCTAGAAC 59.492 45.833 0.00 0.00 39.86 3.01
343 345 4.404394 TCGCAGAAATGGATGTACCTAGAA 59.596 41.667 0.00 0.00 39.86 2.10
344 346 3.958147 TCGCAGAAATGGATGTACCTAGA 59.042 43.478 0.00 0.00 39.86 2.43
345 347 4.051922 GTCGCAGAAATGGATGTACCTAG 58.948 47.826 0.00 0.00 39.69 3.02
346 348 3.490249 CGTCGCAGAAATGGATGTACCTA 60.490 47.826 0.00 0.00 39.69 3.08
347 349 2.738643 CGTCGCAGAAATGGATGTACCT 60.739 50.000 0.00 0.00 39.69 3.08
348 350 1.593006 CGTCGCAGAAATGGATGTACC 59.407 52.381 0.00 0.00 39.69 3.34
349 351 2.535984 CTCGTCGCAGAAATGGATGTAC 59.464 50.000 0.00 0.00 39.69 2.90
350 352 2.165641 ACTCGTCGCAGAAATGGATGTA 59.834 45.455 0.00 0.00 39.69 2.29
351 353 1.066858 ACTCGTCGCAGAAATGGATGT 60.067 47.619 0.00 0.00 39.69 3.06
352 354 1.645034 ACTCGTCGCAGAAATGGATG 58.355 50.000 0.00 0.00 39.69 3.51
353 355 3.520290 TTACTCGTCGCAGAAATGGAT 57.480 42.857 0.00 0.00 39.69 3.41
354 356 3.520290 ATTACTCGTCGCAGAAATGGA 57.480 42.857 0.00 0.00 39.69 3.41
355 357 4.334443 CAAATTACTCGTCGCAGAAATGG 58.666 43.478 0.00 0.00 39.69 3.16
356 358 4.092821 TCCAAATTACTCGTCGCAGAAATG 59.907 41.667 0.00 0.00 39.69 2.32
357 359 4.250464 TCCAAATTACTCGTCGCAGAAAT 58.750 39.130 0.00 0.00 39.69 2.17
358 360 3.655486 TCCAAATTACTCGTCGCAGAAA 58.345 40.909 0.00 0.00 39.69 2.52
359 361 3.306917 TCCAAATTACTCGTCGCAGAA 57.693 42.857 0.00 0.00 39.69 3.02
360 362 2.991190 GTTCCAAATTACTCGTCGCAGA 59.009 45.455 0.00 0.00 0.00 4.26
361 363 2.222508 CGTTCCAAATTACTCGTCGCAG 60.223 50.000 0.00 0.00 0.00 5.18
362 364 1.722464 CGTTCCAAATTACTCGTCGCA 59.278 47.619 0.00 0.00 0.00 5.10
363 365 1.060122 CCGTTCCAAATTACTCGTCGC 59.940 52.381 0.00 0.00 0.00 5.19
364 366 2.597305 CTCCGTTCCAAATTACTCGTCG 59.403 50.000 0.00 0.00 0.00 5.12
365 367 2.928116 CCTCCGTTCCAAATTACTCGTC 59.072 50.000 0.00 0.00 0.00 4.20
366 368 2.354403 CCCTCCGTTCCAAATTACTCGT 60.354 50.000 0.00 0.00 0.00 4.18
367 369 2.093869 TCCCTCCGTTCCAAATTACTCG 60.094 50.000 0.00 0.00 0.00 4.18
368 370 3.055312 ACTCCCTCCGTTCCAAATTACTC 60.055 47.826 0.00 0.00 0.00 2.59
369 371 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
370 372 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
371 373 3.839490 TGTACTCCCTCCGTTCCAAATTA 59.161 43.478 0.00 0.00 0.00 1.40
372 374 2.640826 TGTACTCCCTCCGTTCCAAATT 59.359 45.455 0.00 0.00 0.00 1.82
373 375 2.262637 TGTACTCCCTCCGTTCCAAAT 58.737 47.619 0.00 0.00 0.00 2.32
374 376 1.719529 TGTACTCCCTCCGTTCCAAA 58.280 50.000 0.00 0.00 0.00 3.28
375 377 1.829222 GATGTACTCCCTCCGTTCCAA 59.171 52.381 0.00 0.00 0.00 3.53
376 378 1.006758 AGATGTACTCCCTCCGTTCCA 59.993 52.381 0.00 0.00 0.00 3.53
377 379 1.682323 GAGATGTACTCCCTCCGTTCC 59.318 57.143 0.00 0.00 39.53 3.62
378 380 2.359531 CTGAGATGTACTCCCTCCGTTC 59.640 54.545 0.00 0.00 44.34 3.95
379 381 2.379972 CTGAGATGTACTCCCTCCGTT 58.620 52.381 0.00 0.00 44.34 4.44
380 382 2.024825 GCTGAGATGTACTCCCTCCGT 61.025 57.143 0.00 0.00 44.34 4.69
381 383 0.671251 GCTGAGATGTACTCCCTCCG 59.329 60.000 0.00 0.00 44.34 4.63
382 384 1.686052 CTGCTGAGATGTACTCCCTCC 59.314 57.143 0.00 0.00 44.34 4.30
383 385 1.068434 GCTGCTGAGATGTACTCCCTC 59.932 57.143 0.00 0.00 44.34 4.30
384 386 1.118838 GCTGCTGAGATGTACTCCCT 58.881 55.000 0.00 0.00 44.34 4.20
385 387 0.105778 GGCTGCTGAGATGTACTCCC 59.894 60.000 0.00 0.00 44.34 4.30
386 388 0.826715 TGGCTGCTGAGATGTACTCC 59.173 55.000 0.00 0.00 44.34 3.85
387 389 1.800655 CGTGGCTGCTGAGATGTACTC 60.801 57.143 0.00 0.00 45.11 2.59
388 390 0.174389 CGTGGCTGCTGAGATGTACT 59.826 55.000 0.00 0.00 0.00 2.73
389 391 1.424493 GCGTGGCTGCTGAGATGTAC 61.424 60.000 0.00 0.00 0.00 2.90
411 413 1.001269 TGAGGACGAGGTGGACGAT 60.001 57.895 0.00 0.00 34.70 3.73
461 463 4.394712 AACGAGGCGCCCAGAAGG 62.395 66.667 26.15 8.67 39.47 3.46
505 507 1.635663 GACGAACTGCCCAATGACGG 61.636 60.000 0.00 0.00 0.00 4.79
621 918 0.034380 AGCATGACAGCAGAGGCAAT 60.034 50.000 0.00 0.00 44.61 3.56
647 944 6.127535 CGAGTATCTAAAAGTACCAAGTCCCA 60.128 42.308 0.00 0.00 0.00 4.37
649 946 6.750963 CACGAGTATCTAAAAGTACCAAGTCC 59.249 42.308 0.00 0.00 0.00 3.85
701 998 2.268920 GATGCGAGGGCCAGTTCA 59.731 61.111 6.18 0.00 38.85 3.18
710 1007 4.862092 ACAGCGAGCGATGCGAGG 62.862 66.667 8.14 0.00 34.49 4.63
782 1083 2.844946 TGAAGTTCTGAACAATGGCGA 58.155 42.857 21.50 0.00 0.00 5.54
783 1084 3.624326 TTGAAGTTCTGAACAATGGCG 57.376 42.857 21.50 0.00 0.00 5.69
798 1099 9.826574 AATGATTAATTGGGTCATCATTTGAAG 57.173 29.630 0.00 0.00 41.51 3.02
803 1104 8.543293 ACAGAATGATTAATTGGGTCATCATT 57.457 30.769 6.03 6.03 45.09 2.57
846 1150 0.245539 ATGGTCATGCTGCAAAGTGC 59.754 50.000 6.36 0.00 45.29 4.40
847 1151 2.736144 AATGGTCATGCTGCAAAGTG 57.264 45.000 6.36 0.01 0.00 3.16
848 1152 2.629137 TGAAATGGTCATGCTGCAAAGT 59.371 40.909 6.36 0.00 0.00 2.66
849 1153 3.057104 TCTGAAATGGTCATGCTGCAAAG 60.057 43.478 6.36 2.38 35.07 2.77
850 1154 2.892215 TCTGAAATGGTCATGCTGCAAA 59.108 40.909 6.36 0.00 35.07 3.68
1083 1392 6.439599 CGAGATTATAACTGACAGGACGAAT 58.560 40.000 7.51 1.36 0.00 3.34
1152 1461 1.851021 CTGCCACATTTTCGCCGTCA 61.851 55.000 0.00 0.00 0.00 4.35
1209 1518 4.469657 GTTGGGTGCCATTGAGGATTATA 58.530 43.478 0.00 0.00 41.22 0.98
1226 1535 0.620556 ACCTGATAGCACTGGTTGGG 59.379 55.000 0.00 0.00 38.60 4.12
1257 1569 6.055588 CCACAAACTTTGGACTCTCTCTTTA 58.944 40.000 6.47 0.00 36.02 1.85
1273 1591 0.325203 ACCCCAAACAGCCACAAACT 60.325 50.000 0.00 0.00 0.00 2.66
1312 1632 3.589735 TGGAGGGAGTAGCAAATTACCAA 59.410 43.478 0.00 0.00 0.00 3.67
1322 1642 1.439543 AATGGGATGGAGGGAGTAGC 58.560 55.000 0.00 0.00 0.00 3.58
1352 1676 2.218759 GTGCTAGATACATCCGTTTGCG 59.781 50.000 0.00 0.00 37.95 4.85
1379 1703 7.703197 TCTTCAAAATGAATGTATCTACGCGTA 59.297 33.333 19.40 19.40 35.59 4.42
1381 1705 6.841286 GTCTTCAAAATGAATGTATCTACGCG 59.159 38.462 3.53 3.53 35.59 6.01
1382 1706 7.684670 TGTCTTCAAAATGAATGTATCTACGC 58.315 34.615 0.00 0.00 35.59 4.42
1394 1719 9.474920 GTCCAATGTTATTTGTCTTCAAAATGA 57.525 29.630 0.00 0.00 44.97 2.57
1400 1725 5.309638 TCCGTCCAATGTTATTTGTCTTCA 58.690 37.500 0.00 0.00 0.00 3.02
1401 1726 5.873179 TCCGTCCAATGTTATTTGTCTTC 57.127 39.130 0.00 0.00 0.00 2.87
1403 1728 4.640201 CCATCCGTCCAATGTTATTTGTCT 59.360 41.667 0.00 0.00 0.00 3.41
1409 1734 4.654262 ACTACTCCATCCGTCCAATGTTAT 59.346 41.667 0.00 0.00 0.00 1.89
1416 1741 5.452255 ACTAAATACTACTCCATCCGTCCA 58.548 41.667 0.00 0.00 0.00 4.02
1424 1749 9.186837 CTTAAGTGAGGACTAAATACTACTCCA 57.813 37.037 0.00 0.00 0.00 3.86
1471 1796 7.228507 GGCCTATTTGGAAAAGTTGTGAATTTT 59.771 33.333 0.00 0.00 38.35 1.82
1556 1881 6.524101 TCTTTGGTTGCTTTTGTCTAAAGT 57.476 33.333 8.29 0.00 44.21 2.66
1596 1922 3.650281 TCTACATCATTGTGTGCCCAT 57.350 42.857 3.20 0.00 36.53 4.00
1711 2039 2.233305 AGTAGAAGCCGAGGAGGAAA 57.767 50.000 0.00 0.00 45.00 3.13
1765 2098 7.394016 TGATCAAGCTAAAGTTATCCAGAACA 58.606 34.615 0.00 0.00 0.00 3.18
1879 2227 4.008916 AGGTAACCCACACTAGGATCAT 57.991 45.455 0.00 0.00 37.17 2.45
1906 2254 2.262423 ACCTCTTTGTTCCAGTCTGC 57.738 50.000 0.00 0.00 0.00 4.26
1997 2347 6.183360 TGGTCTTCAAGACAATCTATCTAGCC 60.183 42.308 19.37 0.00 46.79 3.93
2004 2354 9.770097 GAATATCATGGTCTTCAAGACAATCTA 57.230 33.333 19.37 7.82 46.79 1.98
2008 2360 9.551734 CATAGAATATCATGGTCTTCAAGACAA 57.448 33.333 19.37 8.67 46.79 3.18
2011 2363 8.496534 TCCATAGAATATCATGGTCTTCAAGA 57.503 34.615 6.84 0.00 42.07 3.02
2087 2441 1.770061 TCTGGGGGTGTTTAACTTCGT 59.230 47.619 0.00 0.00 0.00 3.85
2089 2443 5.567430 AGTATTCTGGGGGTGTTTAACTTC 58.433 41.667 0.00 0.00 0.00 3.01
2187 2541 9.606631 AGAAGGCAATATGTTTCTCTTAGTTAG 57.393 33.333 0.00 0.00 0.00 2.34
2215 2569 3.430218 GCATCAGCGACCTACAATCATAC 59.570 47.826 0.00 0.00 0.00 2.39
2282 2636 4.016444 GGATGTTTGTCATTCTTGCCCTA 58.984 43.478 0.00 0.00 36.83 3.53
2344 2698 2.166459 CAGGGAGATCGACTTGCTAACA 59.834 50.000 0.00 0.00 0.00 2.41
2380 2734 1.347707 GTGGTCATCCCTCTGACAACA 59.652 52.381 6.82 0.00 45.57 3.33
2399 2753 3.698289 TCTGGTTTCCTCTATGTCTCGT 58.302 45.455 0.00 0.00 0.00 4.18
2407 2761 5.473504 GCAATTTGTCTTCTGGTTTCCTCTA 59.526 40.000 0.00 0.00 0.00 2.43
2459 2818 7.295322 TGGTGGTGATTTTGATGACAAATAA 57.705 32.000 0.00 0.00 43.99 1.40
2473 2832 1.707427 AGAAGGAGCTTGGTGGTGATT 59.293 47.619 0.00 0.00 0.00 2.57
2475 2834 0.687354 GAGAAGGAGCTTGGTGGTGA 59.313 55.000 0.00 0.00 0.00 4.02
2476 2835 0.671781 CGAGAAGGAGCTTGGTGGTG 60.672 60.000 0.00 0.00 0.00 4.17
2477 2836 0.832135 TCGAGAAGGAGCTTGGTGGT 60.832 55.000 0.00 0.00 0.00 4.16
2478 2837 0.390472 GTCGAGAAGGAGCTTGGTGG 60.390 60.000 0.00 0.00 0.00 4.61
2479 2838 0.734253 CGTCGAGAAGGAGCTTGGTG 60.734 60.000 0.00 0.00 0.00 4.17
2480 2839 0.894184 TCGTCGAGAAGGAGCTTGGT 60.894 55.000 0.00 0.00 0.00 3.67
2481 2840 0.179150 CTCGTCGAGAAGGAGCTTGG 60.179 60.000 17.52 0.00 33.45 3.61
2482 2841 0.179150 CCTCGTCGAGAAGGAGCTTG 60.179 60.000 23.74 0.00 38.34 4.01
2483 2842 0.609681 ACCTCGTCGAGAAGGAGCTT 60.610 55.000 23.74 0.00 38.34 3.74
2484 2843 1.001887 ACCTCGTCGAGAAGGAGCT 60.002 57.895 23.74 0.00 38.34 4.09
2485 2844 1.137825 CACCTCGTCGAGAAGGAGC 59.862 63.158 23.74 0.00 38.34 4.70
2486 2845 1.666700 CTACACCTCGTCGAGAAGGAG 59.333 57.143 23.74 16.17 39.19 3.69
2487 2846 1.002888 ACTACACCTCGTCGAGAAGGA 59.997 52.381 23.74 10.80 0.00 3.36
2488 2847 1.451067 ACTACACCTCGTCGAGAAGG 58.549 55.000 23.74 10.57 0.00 3.46
2489 2848 3.260740 ACTACTACACCTCGTCGAGAAG 58.739 50.000 23.74 16.48 0.00 2.85
2490 2849 3.325293 ACTACTACACCTCGTCGAGAA 57.675 47.619 23.74 5.26 0.00 2.87
2491 2850 3.257393 GAACTACTACACCTCGTCGAGA 58.743 50.000 23.74 2.42 0.00 4.04
2492 2851 2.998670 TGAACTACTACACCTCGTCGAG 59.001 50.000 15.53 15.53 0.00 4.04
2493 2852 2.738846 GTGAACTACTACACCTCGTCGA 59.261 50.000 0.00 0.00 0.00 4.20
2494 2853 3.114693 GTGAACTACTACACCTCGTCG 57.885 52.381 0.00 0.00 0.00 5.12
2501 2860 2.614734 GCCAAGGGGTGAACTACTACAC 60.615 54.545 0.00 0.00 36.17 2.90
2502 2861 1.626825 GCCAAGGGGTGAACTACTACA 59.373 52.381 0.00 0.00 36.17 2.74
2503 2862 1.907255 AGCCAAGGGGTGAACTACTAC 59.093 52.381 0.00 0.00 36.17 2.73
2504 2863 2.337359 AGCCAAGGGGTGAACTACTA 57.663 50.000 0.00 0.00 36.17 1.82
2505 2864 2.337359 TAGCCAAGGGGTGAACTACT 57.663 50.000 0.00 0.00 34.28 2.57
2506 2865 2.421529 CCATAGCCAAGGGGTGAACTAC 60.422 54.545 0.00 0.00 34.28 2.73
2507 2866 1.843851 CCATAGCCAAGGGGTGAACTA 59.156 52.381 0.00 0.00 34.28 2.24
2508 2867 0.625849 CCATAGCCAAGGGGTGAACT 59.374 55.000 0.00 0.00 34.28 3.01
2509 2868 0.395724 CCCATAGCCAAGGGGTGAAC 60.396 60.000 0.00 0.00 41.58 3.18
2510 2869 2.006748 CCCATAGCCAAGGGGTGAA 58.993 57.895 0.00 0.00 41.58 3.18
2548 2944 6.265196 TTGAAGCACAAATGAAATAGGTGACT 59.735 34.615 0.00 0.00 39.02 3.41
2622 3018 8.698973 TTTAACTCATAAGAAAACATCCACCA 57.301 30.769 0.00 0.00 0.00 4.17
2672 3068 6.183360 GCCTGCATGAATTAATATTGCATTCG 60.183 38.462 15.90 10.19 41.95 3.34
2744 3140 5.810080 AAGGCATAGTACTACAAGGATCC 57.190 43.478 4.31 2.48 0.00 3.36
2773 3184 6.729100 TGGTTCAAGAAATCTAGGGTCTCTAA 59.271 38.462 0.00 0.00 0.00 2.10
2790 3201 4.202441 CTCCATACTTCCCATGGTTCAAG 58.798 47.826 11.73 11.83 43.03 3.02
2816 3227 0.468226 ACTTGCAAGACGTCCCTTGA 59.532 50.000 32.50 4.34 44.66 3.02
2883 3294 6.366877 TCGGTAGTAGTTTTGTGTTGCTAATC 59.633 38.462 0.00 0.00 0.00 1.75
2889 3300 6.196571 CCTTTTCGGTAGTAGTTTTGTGTTG 58.803 40.000 0.00 0.00 0.00 3.33
2907 3318 2.484651 GTCTTCGCCTTTCTCCCTTTTC 59.515 50.000 0.00 0.00 0.00 2.29
2956 3367 4.576330 AGCTTTACTATCTTGTTGGGCT 57.424 40.909 0.00 0.00 0.00 5.19
2982 3393 7.933577 TCTCCCTACATGAGTTGCATTATTAAG 59.066 37.037 0.00 0.00 34.15 1.85
2983 3394 7.801104 TCTCCCTACATGAGTTGCATTATTAA 58.199 34.615 0.00 0.00 34.15 1.40
3033 3444 3.380637 GCTAGATTACGTGACCTTCCAGA 59.619 47.826 0.00 0.00 0.00 3.86
3034 3445 3.381908 AGCTAGATTACGTGACCTTCCAG 59.618 47.826 0.00 0.00 0.00 3.86
3035 3446 3.362706 AGCTAGATTACGTGACCTTCCA 58.637 45.455 0.00 0.00 0.00 3.53
3036 3447 3.380637 TGAGCTAGATTACGTGACCTTCC 59.619 47.826 0.00 0.00 0.00 3.46
3037 3448 4.634184 TGAGCTAGATTACGTGACCTTC 57.366 45.455 0.00 0.00 0.00 3.46
3038 3449 5.599999 ATTGAGCTAGATTACGTGACCTT 57.400 39.130 0.00 0.00 0.00 3.50
3039 3450 5.828859 AGTATTGAGCTAGATTACGTGACCT 59.171 40.000 0.00 0.00 0.00 3.85
3040 3451 6.074544 AGTATTGAGCTAGATTACGTGACC 57.925 41.667 0.00 0.00 0.00 4.02
3041 3452 6.791299 CGTAGTATTGAGCTAGATTACGTGAC 59.209 42.308 0.00 0.00 0.00 3.67
3042 3453 6.703165 TCGTAGTATTGAGCTAGATTACGTGA 59.297 38.462 0.00 0.00 35.48 4.35
3043 3454 6.885247 TCGTAGTATTGAGCTAGATTACGTG 58.115 40.000 0.00 0.00 35.48 4.49
3044 3455 6.927936 TCTCGTAGTATTGAGCTAGATTACGT 59.072 38.462 7.34 0.00 35.48 3.57
3045 3456 7.116662 AGTCTCGTAGTATTGAGCTAGATTACG 59.883 40.741 0.00 0.00 35.33 3.18
3046 3457 8.314143 AGTCTCGTAGTATTGAGCTAGATTAC 57.686 38.462 0.00 0.00 32.20 1.89
3047 3458 8.775527 CAAGTCTCGTAGTATTGAGCTAGATTA 58.224 37.037 0.00 0.00 32.20 1.75
3048 3459 7.283580 ACAAGTCTCGTAGTATTGAGCTAGATT 59.716 37.037 0.00 0.00 32.20 2.40
3049 3460 6.768861 ACAAGTCTCGTAGTATTGAGCTAGAT 59.231 38.462 0.00 0.00 32.20 1.98
3050 3461 6.114089 ACAAGTCTCGTAGTATTGAGCTAGA 58.886 40.000 0.00 0.00 32.20 2.43
3051 3462 6.366315 ACAAGTCTCGTAGTATTGAGCTAG 57.634 41.667 0.00 0.00 32.20 3.42
3052 3463 5.006455 CGACAAGTCTCGTAGTATTGAGCTA 59.994 44.000 0.00 0.00 32.20 3.32
3053 3464 4.201832 CGACAAGTCTCGTAGTATTGAGCT 60.202 45.833 0.00 0.00 32.20 4.09
3054 3465 4.029704 CGACAAGTCTCGTAGTATTGAGC 58.970 47.826 0.00 0.00 32.20 4.26
3055 3466 5.163884 TGACGACAAGTCTCGTAGTATTGAG 60.164 44.000 0.00 0.00 46.80 3.02
3056 3467 4.692155 TGACGACAAGTCTCGTAGTATTGA 59.308 41.667 0.00 0.00 46.80 2.57
3057 3468 4.966249 TGACGACAAGTCTCGTAGTATTG 58.034 43.478 0.00 0.00 46.80 1.90
3058 3469 5.049198 TGTTGACGACAAGTCTCGTAGTATT 60.049 40.000 0.00 0.00 46.80 1.89
3059 3470 4.453478 TGTTGACGACAAGTCTCGTAGTAT 59.547 41.667 0.00 0.00 46.80 2.12
3060 3471 3.809279 TGTTGACGACAAGTCTCGTAGTA 59.191 43.478 0.00 0.00 46.80 1.82
3061 3472 2.615447 TGTTGACGACAAGTCTCGTAGT 59.385 45.455 0.00 0.00 46.80 2.73
3062 3473 3.263602 TGTTGACGACAAGTCTCGTAG 57.736 47.619 0.00 0.00 46.80 3.51
3063 3474 3.696281 TTGTTGACGACAAGTCTCGTA 57.304 42.857 4.01 0.00 46.80 3.43
3071 3482 2.284190 TGACATGCTTGTTGACGACAA 58.716 42.857 6.70 8.01 45.70 3.18
3072 3483 1.946745 TGACATGCTTGTTGACGACA 58.053 45.000 6.70 0.00 35.79 4.35
3073 3484 2.738846 AGATGACATGCTTGTTGACGAC 59.261 45.455 6.70 0.00 35.79 4.34
3074 3485 3.044235 AGATGACATGCTTGTTGACGA 57.956 42.857 6.70 0.00 35.79 4.20
3075 3486 3.818961 AAGATGACATGCTTGTTGACG 57.181 42.857 6.70 0.00 35.79 4.35
3076 3487 5.869753 AGTAAGATGACATGCTTGTTGAC 57.130 39.130 6.70 2.03 35.79 3.18
3077 3488 6.233434 AGAAGTAAGATGACATGCTTGTTGA 58.767 36.000 6.70 0.00 35.79 3.18
3078 3489 6.148315 TGAGAAGTAAGATGACATGCTTGTTG 59.852 38.462 6.70 0.00 35.79 3.33
3079 3490 6.233434 TGAGAAGTAAGATGACATGCTTGTT 58.767 36.000 6.70 0.00 35.79 2.83
3080 3491 5.798132 TGAGAAGTAAGATGACATGCTTGT 58.202 37.500 4.68 4.68 39.32 3.16
3081 3492 6.922247 ATGAGAAGTAAGATGACATGCTTG 57.078 37.500 0.00 0.00 0.00 4.01
3082 3493 6.883217 ACAATGAGAAGTAAGATGACATGCTT 59.117 34.615 0.00 0.00 0.00 3.91
3083 3494 6.413052 ACAATGAGAAGTAAGATGACATGCT 58.587 36.000 0.00 0.00 0.00 3.79
3084 3495 6.538021 AGACAATGAGAAGTAAGATGACATGC 59.462 38.462 0.00 0.00 0.00 4.06
3085 3496 9.247126 CTAGACAATGAGAAGTAAGATGACATG 57.753 37.037 0.00 0.00 0.00 3.21
3086 3497 9.194972 TCTAGACAATGAGAAGTAAGATGACAT 57.805 33.333 0.00 0.00 0.00 3.06
3087 3498 8.581253 TCTAGACAATGAGAAGTAAGATGACA 57.419 34.615 0.00 0.00 0.00 3.58
3088 3499 9.515020 CTTCTAGACAATGAGAAGTAAGATGAC 57.485 37.037 0.00 0.00 42.45 3.06
3098 3509 6.481313 GCATATGCACTTCTAGACAATGAGAA 59.519 38.462 22.84 0.00 41.59 2.87
3099 3510 5.987953 GCATATGCACTTCTAGACAATGAGA 59.012 40.000 22.84 0.00 41.59 3.27
3100 3511 5.990386 AGCATATGCACTTCTAGACAATGAG 59.010 40.000 28.62 0.00 45.16 2.90
3101 3512 5.922053 AGCATATGCACTTCTAGACAATGA 58.078 37.500 28.62 0.00 45.16 2.57
3102 3513 5.990386 AGAGCATATGCACTTCTAGACAATG 59.010 40.000 28.62 0.00 45.16 2.82
3103 3514 5.990386 CAGAGCATATGCACTTCTAGACAAT 59.010 40.000 28.62 3.66 45.16 2.71
3104 3515 5.105187 ACAGAGCATATGCACTTCTAGACAA 60.105 40.000 28.62 0.00 45.16 3.18
3105 3516 4.403752 ACAGAGCATATGCACTTCTAGACA 59.596 41.667 28.62 0.00 45.16 3.41
3106 3517 4.942852 ACAGAGCATATGCACTTCTAGAC 58.057 43.478 28.62 8.60 45.16 2.59
3107 3518 6.324561 CTACAGAGCATATGCACTTCTAGA 57.675 41.667 28.62 12.59 45.16 2.43
3123 3534 2.164827 TGCATGCCAATTTGCTACAGAG 59.835 45.455 16.68 0.00 39.60 3.35
3124 3535 2.094597 GTGCATGCCAATTTGCTACAGA 60.095 45.455 16.68 0.00 39.60 3.41
3125 3536 2.264813 GTGCATGCCAATTTGCTACAG 58.735 47.619 16.68 0.00 39.60 2.74
3126 3537 1.402588 CGTGCATGCCAATTTGCTACA 60.403 47.619 16.68 0.00 39.60 2.74
3127 3538 1.270971 CGTGCATGCCAATTTGCTAC 58.729 50.000 16.68 1.82 39.60 3.58
3128 3539 0.458197 GCGTGCATGCCAATTTGCTA 60.458 50.000 20.59 0.00 39.60 3.49
3129 3540 1.738830 GCGTGCATGCCAATTTGCT 60.739 52.632 20.59 0.00 39.60 3.91
3130 3541 1.293267 AAGCGTGCATGCCAATTTGC 61.293 50.000 26.95 9.79 39.33 3.68
3131 3542 0.717224 GAAGCGTGCATGCCAATTTG 59.283 50.000 26.95 0.00 34.65 2.32
3132 3543 0.604578 AGAAGCGTGCATGCCAATTT 59.395 45.000 26.95 14.77 34.65 1.82
3133 3544 0.604578 AAGAAGCGTGCATGCCAATT 59.395 45.000 26.95 15.15 34.65 2.32
3134 3545 0.108992 CAAGAAGCGTGCATGCCAAT 60.109 50.000 26.95 13.94 34.65 3.16
3135 3546 1.286570 CAAGAAGCGTGCATGCCAA 59.713 52.632 26.95 0.00 34.65 4.52
3136 3547 1.454572 AACAAGAAGCGTGCATGCCA 61.455 50.000 26.95 0.00 34.65 4.92
3137 3548 0.318955 AAACAAGAAGCGTGCATGCC 60.319 50.000 26.95 12.99 34.65 4.40
3138 3549 1.190763 CAAAACAAGAAGCGTGCATGC 59.809 47.619 23.58 23.58 0.00 4.06
3139 3550 2.216940 CACAAAACAAGAAGCGTGCATG 59.783 45.455 0.09 0.09 0.00 4.06
3140 3551 2.462889 CACAAAACAAGAAGCGTGCAT 58.537 42.857 0.00 0.00 0.00 3.96
3141 3552 1.906757 CACAAAACAAGAAGCGTGCA 58.093 45.000 0.00 0.00 0.00 4.57
3142 3553 0.572125 GCACAAAACAAGAAGCGTGC 59.428 50.000 0.00 0.00 42.41 5.34
3143 3554 2.193306 AGCACAAAACAAGAAGCGTG 57.807 45.000 0.00 0.00 0.00 5.34
3144 3555 2.939460 AAGCACAAAACAAGAAGCGT 57.061 40.000 0.00 0.00 0.00 5.07
3145 3556 3.000222 GGAAAAGCACAAAACAAGAAGCG 60.000 43.478 0.00 0.00 0.00 4.68
3146 3557 4.183865 AGGAAAAGCACAAAACAAGAAGC 58.816 39.130 0.00 0.00 0.00 3.86
3147 3558 5.654497 AGAGGAAAAGCACAAAACAAGAAG 58.346 37.500 0.00 0.00 0.00 2.85
3148 3559 5.659440 AGAGGAAAAGCACAAAACAAGAA 57.341 34.783 0.00 0.00 0.00 2.52
3149 3560 5.650543 GAAGAGGAAAAGCACAAAACAAGA 58.349 37.500 0.00 0.00 0.00 3.02
3150 3561 4.500477 CGAAGAGGAAAAGCACAAAACAAG 59.500 41.667 0.00 0.00 0.00 3.16
3151 3562 4.156922 TCGAAGAGGAAAAGCACAAAACAA 59.843 37.500 0.00 0.00 0.00 2.83
3152 3563 3.692101 TCGAAGAGGAAAAGCACAAAACA 59.308 39.130 0.00 0.00 0.00 2.83
3153 3564 4.287238 TCGAAGAGGAAAAGCACAAAAC 57.713 40.909 0.00 0.00 0.00 2.43
3168 3579 6.542735 AGCTGTACATATAGTCAACTCGAAGA 59.457 38.462 0.00 0.00 0.00 2.87
3169 3580 6.730175 AGCTGTACATATAGTCAACTCGAAG 58.270 40.000 0.00 0.00 0.00 3.79
3170 3581 6.317893 TGAGCTGTACATATAGTCAACTCGAA 59.682 38.462 0.00 0.00 30.18 3.71
3171 3582 5.820947 TGAGCTGTACATATAGTCAACTCGA 59.179 40.000 0.00 0.00 30.18 4.04
3172 3583 6.061231 TGAGCTGTACATATAGTCAACTCG 57.939 41.667 0.00 0.00 30.18 4.18
3173 3584 6.419413 GCTTGAGCTGTACATATAGTCAACTC 59.581 42.308 0.00 0.00 38.21 3.01
3174 3585 6.127338 TGCTTGAGCTGTACATATAGTCAACT 60.127 38.462 0.00 0.00 42.66 3.16
3175 3586 6.042777 TGCTTGAGCTGTACATATAGTCAAC 58.957 40.000 0.00 0.00 42.66 3.18
3176 3587 6.220726 TGCTTGAGCTGTACATATAGTCAA 57.779 37.500 0.00 1.18 42.66 3.18
3177 3588 5.852282 TGCTTGAGCTGTACATATAGTCA 57.148 39.130 0.00 0.00 42.66 3.41
3178 3589 6.201806 CCTTTGCTTGAGCTGTACATATAGTC 59.798 42.308 0.00 0.00 42.66 2.59
3179 3590 6.051717 CCTTTGCTTGAGCTGTACATATAGT 58.948 40.000 0.00 0.00 42.66 2.12
3180 3591 5.049818 GCCTTTGCTTGAGCTGTACATATAG 60.050 44.000 0.00 0.00 42.66 1.31
3181 3592 4.816385 GCCTTTGCTTGAGCTGTACATATA 59.184 41.667 0.00 0.00 42.66 0.86
3182 3593 3.629398 GCCTTTGCTTGAGCTGTACATAT 59.371 43.478 0.00 0.00 42.66 1.78
3183 3594 3.009723 GCCTTTGCTTGAGCTGTACATA 58.990 45.455 0.00 0.00 42.66 2.29
3184 3595 1.815003 GCCTTTGCTTGAGCTGTACAT 59.185 47.619 0.00 0.00 42.66 2.29
3185 3596 1.238439 GCCTTTGCTTGAGCTGTACA 58.762 50.000 4.44 0.00 42.66 2.90
3186 3597 0.523519 GGCCTTTGCTTGAGCTGTAC 59.476 55.000 0.00 0.00 42.66 2.90
3187 3598 0.401738 AGGCCTTTGCTTGAGCTGTA 59.598 50.000 0.00 0.00 42.66 2.74
3188 3599 0.401738 TAGGCCTTTGCTTGAGCTGT 59.598 50.000 12.58 0.00 42.66 4.40
3189 3600 1.093159 CTAGGCCTTTGCTTGAGCTG 58.907 55.000 12.58 0.00 42.66 4.24
3190 3601 0.034670 CCTAGGCCTTTGCTTGAGCT 60.035 55.000 12.58 0.00 42.66 4.09
3191 3602 0.322906 ACCTAGGCCTTTGCTTGAGC 60.323 55.000 12.58 0.00 42.50 4.26
3192 3603 3.567478 ATACCTAGGCCTTTGCTTGAG 57.433 47.619 12.58 0.00 37.74 3.02
3193 3604 3.265737 TGAATACCTAGGCCTTTGCTTGA 59.734 43.478 12.58 0.00 37.74 3.02
3194 3605 3.620488 TGAATACCTAGGCCTTTGCTTG 58.380 45.455 12.58 0.00 37.74 4.01
3195 3606 4.316025 TTGAATACCTAGGCCTTTGCTT 57.684 40.909 12.58 0.00 37.74 3.91
3196 3607 4.526438 ATTGAATACCTAGGCCTTTGCT 57.474 40.909 12.58 0.00 37.74 3.91
3197 3608 5.377478 ACTATTGAATACCTAGGCCTTTGC 58.623 41.667 12.58 0.00 0.00 3.68
3198 3609 6.828785 ACAACTATTGAATACCTAGGCCTTTG 59.171 38.462 12.58 6.53 0.00 2.77
3199 3610 6.970191 ACAACTATTGAATACCTAGGCCTTT 58.030 36.000 12.58 0.00 0.00 3.11
3200 3611 6.576778 ACAACTATTGAATACCTAGGCCTT 57.423 37.500 12.58 1.86 0.00 4.35
3201 3612 7.567622 TCTTACAACTATTGAATACCTAGGCCT 59.432 37.037 11.78 11.78 0.00 5.19
3202 3613 7.656542 GTCTTACAACTATTGAATACCTAGGCC 59.343 40.741 9.30 0.00 0.00 5.19
3203 3614 7.656542 GGTCTTACAACTATTGAATACCTAGGC 59.343 40.741 9.30 0.00 0.00 3.93
3204 3615 8.701895 TGGTCTTACAACTATTGAATACCTAGG 58.298 37.037 7.41 7.41 0.00 3.02
3207 3618 9.396022 CATTGGTCTTACAACTATTGAATACCT 57.604 33.333 0.00 0.00 32.39 3.08
3208 3619 8.129211 GCATTGGTCTTACAACTATTGAATACC 58.871 37.037 0.00 0.00 32.39 2.73
3209 3620 8.893727 AGCATTGGTCTTACAACTATTGAATAC 58.106 33.333 0.00 0.00 32.39 1.89
3210 3621 9.109393 GAGCATTGGTCTTACAACTATTGAATA 57.891 33.333 8.59 0.00 32.39 1.75
3211 3622 7.831193 AGAGCATTGGTCTTACAACTATTGAAT 59.169 33.333 12.50 0.00 37.04 2.57
3212 3623 7.119699 CAGAGCATTGGTCTTACAACTATTGAA 59.880 37.037 15.47 0.00 38.40 2.69
3213 3624 6.595326 CAGAGCATTGGTCTTACAACTATTGA 59.405 38.462 15.47 0.00 38.40 2.57
3214 3625 6.372659 ACAGAGCATTGGTCTTACAACTATTG 59.627 38.462 15.47 4.57 38.40 1.90
3215 3626 6.476378 ACAGAGCATTGGTCTTACAACTATT 58.524 36.000 15.47 0.00 38.40 1.73
3216 3627 6.054860 ACAGAGCATTGGTCTTACAACTAT 57.945 37.500 15.47 0.00 38.40 2.12
3217 3628 5.483685 ACAGAGCATTGGTCTTACAACTA 57.516 39.130 15.47 0.00 38.40 2.24
3218 3629 4.357918 ACAGAGCATTGGTCTTACAACT 57.642 40.909 15.47 0.00 38.40 3.16
3219 3630 4.320494 CCAACAGAGCATTGGTCTTACAAC 60.320 45.833 15.47 0.00 41.55 3.32
3220 3631 3.820467 CCAACAGAGCATTGGTCTTACAA 59.180 43.478 15.47 0.00 41.55 2.41
3221 3632 3.411446 CCAACAGAGCATTGGTCTTACA 58.589 45.455 15.47 0.00 41.55 2.41
3222 3633 2.749621 CCCAACAGAGCATTGGTCTTAC 59.250 50.000 15.47 0.00 44.46 2.34
3223 3634 2.290896 CCCCAACAGAGCATTGGTCTTA 60.291 50.000 15.47 0.00 44.46 2.10
3224 3635 1.548582 CCCCAACAGAGCATTGGTCTT 60.549 52.381 15.47 5.39 44.46 3.01
3225 3636 0.038744 CCCCAACAGAGCATTGGTCT 59.961 55.000 12.50 12.50 44.46 3.85
3226 3637 0.038166 TCCCCAACAGAGCATTGGTC 59.962 55.000 7.79 7.79 44.46 4.02
3227 3638 0.482446 TTCCCCAACAGAGCATTGGT 59.518 50.000 3.25 0.00 44.46 3.67
3228 3639 0.890683 GTTCCCCAACAGAGCATTGG 59.109 55.000 0.00 0.00 45.36 3.16
3229 3640 0.523072 CGTTCCCCAACAGAGCATTG 59.477 55.000 0.00 0.00 32.14 2.82
3230 3641 0.110486 ACGTTCCCCAACAGAGCATT 59.890 50.000 0.00 0.00 32.14 3.56
3231 3642 0.981183 TACGTTCCCCAACAGAGCAT 59.019 50.000 0.00 0.00 32.14 3.79
3232 3643 0.320374 CTACGTTCCCCAACAGAGCA 59.680 55.000 0.00 0.00 32.14 4.26
3233 3644 0.320697 ACTACGTTCCCCAACAGAGC 59.679 55.000 0.00 0.00 32.14 4.09
3234 3645 3.947910 TTACTACGTTCCCCAACAGAG 57.052 47.619 0.00 0.00 32.14 3.35
3235 3646 4.283978 TGAATTACTACGTTCCCCAACAGA 59.716 41.667 0.00 0.00 32.14 3.41
3236 3647 4.571919 TGAATTACTACGTTCCCCAACAG 58.428 43.478 0.00 0.00 32.14 3.16
3237 3648 4.620589 TGAATTACTACGTTCCCCAACA 57.379 40.909 0.00 0.00 32.14 3.33
3238 3649 5.945466 TTTGAATTACTACGTTCCCCAAC 57.055 39.130 0.00 0.00 0.00 3.77
3239 3650 6.956202 TTTTTGAATTACTACGTTCCCCAA 57.044 33.333 0.00 0.00 0.00 4.12
3261 3672 9.367444 CGACACAACTCTAATAGTAGGAATTTT 57.633 33.333 0.00 0.00 37.50 1.82
3262 3673 8.746530 TCGACACAACTCTAATAGTAGGAATTT 58.253 33.333 0.00 0.00 37.50 1.82
3263 3674 8.289939 TCGACACAACTCTAATAGTAGGAATT 57.710 34.615 0.00 0.00 37.50 2.17
3264 3675 7.876936 TCGACACAACTCTAATAGTAGGAAT 57.123 36.000 0.00 0.00 37.50 3.01
3265 3676 7.692460 TTCGACACAACTCTAATAGTAGGAA 57.308 36.000 0.00 0.00 37.50 3.36
3266 3677 7.876936 ATTCGACACAACTCTAATAGTAGGA 57.123 36.000 0.00 0.00 37.50 2.94


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.