Multiple sequence alignment - TraesCS5B01G325200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G325200 chr5B 100.000 3753 0 0 1 3753 509184395 509188147 0.000000e+00 6931.0
1 TraesCS5B01G325200 chr5B 89.024 164 16 2 648 810 48622454 48622616 6.360000e-48 202.0
2 TraesCS5B01G325200 chr5B 91.852 135 7 4 1991 2123 653800284 653800152 6.400000e-43 185.0
3 TraesCS5B01G325200 chr5B 94.915 118 5 1 1997 2113 571209383 571209266 2.300000e-42 183.0
4 TraesCS5B01G325200 chr5D 95.099 1408 60 7 2112 3518 422430620 422432019 0.000000e+00 2209.0
5 TraesCS5B01G325200 chr5D 93.898 508 24 2 809 1314 422429498 422430000 0.000000e+00 760.0
6 TraesCS5B01G325200 chr5D 96.732 306 10 0 1610 1915 422430016 422430321 9.300000e-141 510.0
7 TraesCS5B01G325200 chr5D 83.444 302 21 10 360 661 422429219 422429491 1.730000e-63 254.0
8 TraesCS5B01G325200 chr5D 94.624 93 4 1 1908 2000 422430531 422430622 3.910000e-30 143.0
9 TraesCS5B01G325200 chr5D 89.552 67 2 3 87 153 422428600 422428661 3.110000e-11 80.5
10 TraesCS5B01G325200 chr5A 93.187 1277 53 4 2112 3387 535669435 535670678 0.000000e+00 1845.0
11 TraesCS5B01G325200 chr5A 95.246 610 20 4 1396 2000 535668832 535669437 0.000000e+00 957.0
12 TraesCS5B01G325200 chr5A 96.063 508 18 1 809 1314 535668327 535668834 0.000000e+00 826.0
13 TraesCS5B01G325200 chr5A 84.461 798 65 16 2112 2899 698369670 698370418 0.000000e+00 732.0
14 TraesCS5B01G325200 chr5A 85.665 579 39 23 87 661 535667782 535668320 1.510000e-158 569.0
15 TraesCS5B01G325200 chr5A 87.056 394 33 11 1623 2000 698369281 698369672 2.680000e-116 429.0
16 TraesCS5B01G325200 chr5A 81.564 358 30 14 965 1306 698368732 698369069 2.870000e-66 263.0
17 TraesCS5B01G325200 chr5A 90.598 117 9 2 1309 1423 48918076 48918192 1.810000e-33 154.0
18 TraesCS5B01G325200 chr4D 86.823 1108 99 14 2159 3257 509504279 509505348 0.000000e+00 1194.0
19 TraesCS5B01G325200 chr4D 83.901 323 40 7 1615 1927 509500763 509501083 7.880000e-77 298.0
20 TraesCS5B01G325200 chr4D 90.260 154 15 0 657 810 64390468 64390621 6.360000e-48 202.0
21 TraesCS5B01G325200 chr7D 85.995 407 37 7 919 1314 356895583 356895186 5.800000e-113 418.0
22 TraesCS5B01G325200 chr7D 85.232 237 23 8 1396 1622 356895188 356894954 2.250000e-57 233.0
23 TraesCS5B01G325200 chr7D 92.053 151 12 0 660 810 84347710 84347860 2.940000e-51 213.0
24 TraesCS5B01G325200 chr7A 85.169 236 24 8 1396 1622 386359261 386359494 8.110000e-57 231.0
25 TraesCS5B01G325200 chr7A 91.391 151 13 0 660 810 451519811 451519961 1.370000e-49 207.0
26 TraesCS5B01G325200 chr1B 92.053 151 12 0 660 810 325812546 325812696 2.940000e-51 213.0
27 TraesCS5B01G325200 chr1B 91.503 153 13 0 658 810 49838516 49838668 1.060000e-50 211.0
28 TraesCS5B01G325200 chr1B 88.415 164 17 2 648 810 99886167 99886329 2.960000e-46 196.0
29 TraesCS5B01G325200 chr1B 90.370 135 10 3 1988 2120 613246056 613245923 1.390000e-39 174.0
30 TraesCS5B01G325200 chr1B 89.286 140 11 4 1982 2119 555753227 555753090 4.980000e-39 172.0
31 TraesCS5B01G325200 chr1B 96.667 60 2 0 3 62 426796502 426796561 2.390000e-17 100.0
32 TraesCS5B01G325200 chr3A 91.447 152 13 0 659 810 600920854 600921005 3.800000e-50 209.0
33 TraesCS5B01G325200 chr4B 91.391 151 11 1 660 810 447106869 447107017 4.910000e-49 206.0
34 TraesCS5B01G325200 chr4B 94.167 120 6 1 1998 2116 467274990 467274871 8.280000e-42 182.0
35 TraesCS5B01G325200 chr3B 92.593 135 7 3 1989 2121 651739715 651739848 1.380000e-44 191.0
36 TraesCS5B01G325200 chr3B 92.063 126 8 2 1996 2119 744209817 744209692 3.850000e-40 176.0
37 TraesCS5B01G325200 chr3B 92.308 39 2 1 3604 3641 643081851 643081889 2.000000e-03 54.7
38 TraesCS5B01G325200 chr6D 90.441 136 11 2 1986 2120 87087840 87087974 1.070000e-40 178.0
39 TraesCS5B01G325200 chr6D 80.000 140 27 1 3499 3637 6369623 6369762 6.630000e-18 102.0
40 TraesCS5B01G325200 chr6D 80.303 132 25 1 3499 3629 6350841 6350972 8.580000e-17 99.0
41 TraesCS5B01G325200 chr6B 94.017 117 6 1 1998 2113 692579571 692579455 3.850000e-40 176.0
42 TraesCS5B01G325200 chr6B 97.778 90 2 0 1309 1398 220324862 220324951 5.020000e-34 156.0
43 TraesCS5B01G325200 chr6B 77.857 140 30 1 3499 3637 11592096 11592235 6.680000e-13 86.1
44 TraesCS5B01G325200 chr2A 97.872 94 2 0 1312 1405 715989490 715989397 3.000000e-36 163.0
45 TraesCS5B01G325200 chr2A 97.802 91 2 0 1310 1400 693209980 693209890 1.400000e-34 158.0
46 TraesCS5B01G325200 chr2A 97.778 90 2 0 1311 1400 236839341 236839252 5.020000e-34 156.0
47 TraesCS5B01G325200 chr2A 88.983 118 12 1 1285 1401 683140077 683140194 1.090000e-30 145.0
48 TraesCS5B01G325200 chrUn 97.778 90 2 0 1311 1400 279936301 279936212 5.020000e-34 156.0
49 TraesCS5B01G325200 chr3D 93.269 104 5 2 1311 1414 76376779 76376678 6.490000e-33 152.0
50 TraesCS5B01G325200 chr3D 92.308 104 7 1 1297 1400 598729940 598729838 3.020000e-31 147.0
51 TraesCS5B01G325200 chr4A 88.525 61 6 1 3581 3640 16042125 16042065 5.200000e-09 73.1


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G325200 chr5B 509184395 509188147 3752 False 6931.000000 6931 100.000000 1 3753 1 chr5B.!!$F2 3752
1 TraesCS5B01G325200 chr5D 422428600 422432019 3419 False 659.416667 2209 92.224833 87 3518 6 chr5D.!!$F1 3431
2 TraesCS5B01G325200 chr5A 535667782 535670678 2896 False 1049.250000 1845 92.540250 87 3387 4 chr5A.!!$F2 3300
3 TraesCS5B01G325200 chr5A 698368732 698370418 1686 False 474.666667 732 84.360333 965 2899 3 chr5A.!!$F3 1934
4 TraesCS5B01G325200 chr4D 509500763 509505348 4585 False 746.000000 1194 85.362000 1615 3257 2 chr4D.!!$F2 1642
5 TraesCS5B01G325200 chr7D 356894954 356895583 629 True 325.500000 418 85.613500 919 1622 2 chr7D.!!$R1 703

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
80 81 0.106708 TCTCTTCCTGCACGCTTTGT 59.893 50.0 0.0 0.0 0.00 2.83 F
1318 1727 0.034283 GTGACTCCCGTCTACTCCCT 60.034 60.0 0.0 0.0 40.86 4.20 F
1319 1728 0.255318 TGACTCCCGTCTACTCCCTC 59.745 60.0 0.0 0.0 40.86 4.30 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2073 4145 0.246635 ACTTGTCGGAGGAACGGATG 59.753 55.000 0.00 0.00 0.00 3.51 R
2647 6326 1.027357 CAGCAGCCTGAAAACAGTGT 58.973 50.000 0.00 0.00 41.77 3.55 R
3188 6871 1.427819 CGAGGTTGGCGGCAATTAC 59.572 57.895 28.07 19.68 0.00 1.89 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
33 34 4.643795 CACGGAGATGTGCCCAAT 57.356 55.556 0.00 0.00 32.31 3.16
34 35 2.872408 CACGGAGATGTGCCCAATT 58.128 52.632 0.00 0.00 32.31 2.32
35 36 0.734889 CACGGAGATGTGCCCAATTC 59.265 55.000 0.00 0.00 32.31 2.17
36 37 0.620556 ACGGAGATGTGCCCAATTCT 59.379 50.000 0.00 0.00 0.00 2.40
37 38 1.019673 CGGAGATGTGCCCAATTCTG 58.980 55.000 0.00 0.00 0.00 3.02
38 39 1.396653 GGAGATGTGCCCAATTCTGG 58.603 55.000 0.00 0.00 43.10 3.86
39 40 1.064463 GGAGATGTGCCCAATTCTGGA 60.064 52.381 0.00 0.00 46.92 3.86
40 41 2.423947 GGAGATGTGCCCAATTCTGGAT 60.424 50.000 0.00 0.00 46.92 3.41
41 42 2.621998 GAGATGTGCCCAATTCTGGATG 59.378 50.000 0.00 0.00 46.92 3.51
42 43 1.068127 GATGTGCCCAATTCTGGATGC 59.932 52.381 0.00 0.00 46.92 3.91
43 44 0.251698 TGTGCCCAATTCTGGATGCA 60.252 50.000 0.00 0.00 46.92 3.96
44 45 0.896923 GTGCCCAATTCTGGATGCAA 59.103 50.000 0.00 0.00 46.92 4.08
45 46 1.483415 GTGCCCAATTCTGGATGCAAT 59.517 47.619 0.00 0.00 46.92 3.56
46 47 1.758280 TGCCCAATTCTGGATGCAATC 59.242 47.619 0.00 0.00 46.92 2.67
47 48 2.037144 GCCCAATTCTGGATGCAATCT 58.963 47.619 0.00 0.00 46.92 2.40
48 49 2.223971 GCCCAATTCTGGATGCAATCTG 60.224 50.000 0.00 0.00 46.92 2.90
49 50 3.293337 CCCAATTCTGGATGCAATCTGA 58.707 45.455 0.00 0.00 46.92 3.27
50 51 3.702548 CCCAATTCTGGATGCAATCTGAA 59.297 43.478 11.99 11.99 46.92 3.02
51 52 4.160814 CCCAATTCTGGATGCAATCTGAAA 59.839 41.667 13.07 0.00 46.92 2.69
52 53 5.337733 CCCAATTCTGGATGCAATCTGAAAA 60.338 40.000 13.07 0.00 46.92 2.29
53 54 5.579511 CCAATTCTGGATGCAATCTGAAAAC 59.420 40.000 13.07 0.00 46.92 2.43
54 55 5.988310 ATTCTGGATGCAATCTGAAAACA 57.012 34.783 13.07 0.00 44.71 2.83
55 56 5.787953 TTCTGGATGCAATCTGAAAACAA 57.212 34.783 0.00 0.00 44.71 2.83
56 57 5.988310 TCTGGATGCAATCTGAAAACAAT 57.012 34.783 0.00 0.00 44.71 2.71
57 58 5.957798 TCTGGATGCAATCTGAAAACAATC 58.042 37.500 0.00 0.00 44.71 2.67
58 59 5.713389 TCTGGATGCAATCTGAAAACAATCT 59.287 36.000 0.00 0.00 44.71 2.40
59 60 5.716094 TGGATGCAATCTGAAAACAATCTG 58.284 37.500 0.00 0.00 44.71 2.90
60 61 4.565564 GGATGCAATCTGAAAACAATCTGC 59.434 41.667 0.00 0.00 44.71 4.26
61 62 4.859304 TGCAATCTGAAAACAATCTGCT 57.141 36.364 0.00 0.00 0.00 4.24
62 63 4.801891 TGCAATCTGAAAACAATCTGCTC 58.198 39.130 0.00 0.00 0.00 4.26
63 64 4.521639 TGCAATCTGAAAACAATCTGCTCT 59.478 37.500 0.00 0.00 0.00 4.09
64 65 5.094134 GCAATCTGAAAACAATCTGCTCTC 58.906 41.667 0.00 0.00 0.00 3.20
65 66 5.106237 GCAATCTGAAAACAATCTGCTCTCT 60.106 40.000 0.00 0.00 0.00 3.10
66 67 6.569994 GCAATCTGAAAACAATCTGCTCTCTT 60.570 38.462 0.00 0.00 0.00 2.85
67 68 6.740411 ATCTGAAAACAATCTGCTCTCTTC 57.260 37.500 0.00 0.00 0.00 2.87
68 69 4.999950 TCTGAAAACAATCTGCTCTCTTCC 59.000 41.667 0.00 0.00 0.00 3.46
69 70 4.978099 TGAAAACAATCTGCTCTCTTCCT 58.022 39.130 0.00 0.00 0.00 3.36
70 71 4.758674 TGAAAACAATCTGCTCTCTTCCTG 59.241 41.667 0.00 0.00 0.00 3.86
71 72 2.399916 ACAATCTGCTCTCTTCCTGC 57.600 50.000 0.00 0.00 0.00 4.85
72 73 1.627329 ACAATCTGCTCTCTTCCTGCA 59.373 47.619 0.00 0.00 35.30 4.41
73 74 2.008329 CAATCTGCTCTCTTCCTGCAC 58.992 52.381 0.00 0.00 32.91 4.57
74 75 0.175302 ATCTGCTCTCTTCCTGCACG 59.825 55.000 0.00 0.00 32.91 5.34
75 76 2.047844 TGCTCTCTTCCTGCACGC 60.048 61.111 0.00 0.00 0.00 5.34
76 77 2.264166 GCTCTCTTCCTGCACGCT 59.736 61.111 0.00 0.00 0.00 5.07
77 78 1.375268 GCTCTCTTCCTGCACGCTT 60.375 57.895 0.00 0.00 0.00 4.68
78 79 0.952984 GCTCTCTTCCTGCACGCTTT 60.953 55.000 0.00 0.00 0.00 3.51
79 80 0.795085 CTCTCTTCCTGCACGCTTTG 59.205 55.000 0.00 0.00 0.00 2.77
80 81 0.106708 TCTCTTCCTGCACGCTTTGT 59.893 50.000 0.00 0.00 0.00 2.83
221 222 2.996734 CACCGCCCTTGGGCAAAT 60.997 61.111 27.80 11.39 34.62 2.32
222 223 2.679996 ACCGCCCTTGGGCAAATC 60.680 61.111 27.80 1.09 34.62 2.17
223 224 3.460868 CCGCCCTTGGGCAAATCC 61.461 66.667 27.80 0.38 34.62 3.01
258 259 1.374758 CTCGGACGCAAGCCTTTCT 60.375 57.895 0.00 0.00 45.62 2.52
335 343 3.531207 GTACGGCGGTACCTCCCC 61.531 72.222 20.66 8.95 42.61 4.81
428 815 0.756070 GGACTTCCTACTAGCCGCCT 60.756 60.000 0.00 0.00 0.00 5.52
429 816 1.112950 GACTTCCTACTAGCCGCCTT 58.887 55.000 0.00 0.00 0.00 4.35
430 817 0.824759 ACTTCCTACTAGCCGCCTTG 59.175 55.000 0.00 0.00 0.00 3.61
431 818 0.530870 CTTCCTACTAGCCGCCTTGC 60.531 60.000 0.00 0.00 0.00 4.01
432 819 1.968050 TTCCTACTAGCCGCCTTGCC 61.968 60.000 0.00 0.00 0.00 4.52
433 820 2.279517 CTACTAGCCGCCTTGCCG 60.280 66.667 0.00 0.00 0.00 5.69
434 821 4.524318 TACTAGCCGCCTTGCCGC 62.524 66.667 0.00 0.00 33.34 6.53
498 885 1.508545 CACTGTCTCCGCATCGTCT 59.491 57.895 0.00 0.00 0.00 4.18
503 890 0.592754 GTCTCCGCATCGTCTACTGC 60.593 60.000 0.00 0.00 35.02 4.40
523 910 2.001361 TTCGCTACTGCTACCGCCTC 62.001 60.000 0.00 0.00 36.97 4.70
536 923 1.674764 CCGCCTCTCTGTCATCTGCT 61.675 60.000 0.00 0.00 0.00 4.24
555 942 2.956799 TTCAGCGGCTGCAGGTTTGA 62.957 55.000 24.78 11.46 46.23 2.69
603 990 7.543947 TCTTGTTGATGAACTGTATATGCAG 57.456 36.000 18.12 18.12 41.92 4.41
629 1016 8.793592 GTTCTTGGTATCTTAGAAATTTGGTGT 58.206 33.333 0.00 0.00 30.37 4.16
661 1048 5.631096 GGCTTGATGCTTTCTTTTGAACTAC 59.369 40.000 0.00 0.00 42.39 2.73
662 1049 6.442112 GCTTGATGCTTTCTTTTGAACTACT 58.558 36.000 0.00 0.00 38.30 2.57
664 1051 7.114106 GCTTGATGCTTTCTTTTGAACTACTTC 59.886 37.037 0.00 0.00 38.30 3.01
665 1052 6.970484 TGATGCTTTCTTTTGAACTACTTCC 58.030 36.000 0.00 0.00 38.30 3.46
666 1053 6.772716 TGATGCTTTCTTTTGAACTACTTCCT 59.227 34.615 0.00 0.00 38.30 3.36
667 1054 6.619801 TGCTTTCTTTTGAACTACTTCCTC 57.380 37.500 0.00 0.00 38.30 3.71
668 1055 6.357367 TGCTTTCTTTTGAACTACTTCCTCT 58.643 36.000 0.00 0.00 38.30 3.69
669 1056 6.260936 TGCTTTCTTTTGAACTACTTCCTCTG 59.739 38.462 0.00 0.00 38.30 3.35
670 1057 6.261158 GCTTTCTTTTGAACTACTTCCTCTGT 59.739 38.462 0.00 0.00 38.30 3.41
671 1058 7.201741 GCTTTCTTTTGAACTACTTCCTCTGTT 60.202 37.037 0.00 0.00 38.30 3.16
672 1059 7.787725 TTCTTTTGAACTACTTCCTCTGTTC 57.212 36.000 0.00 0.00 39.18 3.18
673 1060 6.289064 TCTTTTGAACTACTTCCTCTGTTCC 58.711 40.000 0.00 0.00 38.29 3.62
674 1061 5.888982 TTTGAACTACTTCCTCTGTTCCT 57.111 39.130 0.00 0.00 38.29 3.36
675 1062 6.989155 TTTGAACTACTTCCTCTGTTCCTA 57.011 37.500 0.00 0.00 38.29 2.94
676 1063 6.989155 TTGAACTACTTCCTCTGTTCCTAA 57.011 37.500 0.00 0.00 38.29 2.69
677 1064 6.989155 TGAACTACTTCCTCTGTTCCTAAA 57.011 37.500 0.00 0.00 38.29 1.85
678 1065 7.554959 TGAACTACTTCCTCTGTTCCTAAAT 57.445 36.000 0.00 0.00 38.29 1.40
679 1066 8.660295 TGAACTACTTCCTCTGTTCCTAAATA 57.340 34.615 0.00 0.00 38.29 1.40
680 1067 9.268282 TGAACTACTTCCTCTGTTCCTAAATAT 57.732 33.333 0.00 0.00 38.29 1.28
686 1073 9.495382 ACTTCCTCTGTTCCTAAATATAAGTCT 57.505 33.333 0.00 0.00 0.00 3.24
706 1093 7.873739 AGTCTTTTTAGAAATTTCAATGCGG 57.126 32.000 19.99 6.44 0.00 5.69
707 1094 7.657336 AGTCTTTTTAGAAATTTCAATGCGGA 58.343 30.769 19.99 8.45 0.00 5.54
708 1095 7.595130 AGTCTTTTTAGAAATTTCAATGCGGAC 59.405 33.333 19.99 17.70 0.00 4.79
709 1096 7.595130 GTCTTTTTAGAAATTTCAATGCGGACT 59.405 33.333 19.99 0.00 0.00 3.85
710 1097 8.788806 TCTTTTTAGAAATTTCAATGCGGACTA 58.211 29.630 19.99 0.00 0.00 2.59
711 1098 8.736751 TTTTTAGAAATTTCAATGCGGACTAC 57.263 30.769 19.99 0.00 0.00 2.73
712 1099 7.441890 TTTAGAAATTTCAATGCGGACTACA 57.558 32.000 19.99 0.00 0.00 2.74
713 1100 7.624360 TTAGAAATTTCAATGCGGACTACAT 57.376 32.000 19.99 0.00 0.00 2.29
714 1101 8.725405 TTAGAAATTTCAATGCGGACTACATA 57.275 30.769 19.99 0.00 0.00 2.29
715 1102 7.016361 AGAAATTTCAATGCGGACTACATAC 57.984 36.000 19.99 0.00 0.00 2.39
716 1103 5.751243 AATTTCAATGCGGACTACATACC 57.249 39.130 0.00 0.00 0.00 2.73
730 1117 7.849496 GGACTACATACCGATGTATATAGACG 58.151 42.308 5.33 0.00 45.42 4.18
731 1118 7.493971 GGACTACATACCGATGTATATAGACGT 59.506 40.741 5.33 0.00 45.42 4.34
732 1119 9.521503 GACTACATACCGATGTATATAGACGTA 57.478 37.037 5.33 0.00 45.42 3.57
733 1120 9.307121 ACTACATACCGATGTATATAGACGTAC 57.693 37.037 5.33 0.00 45.42 3.67
734 1121 9.526713 CTACATACCGATGTATATAGACGTACT 57.473 37.037 0.00 0.00 45.42 2.73
735 1122 8.783833 ACATACCGATGTATATAGACGTACTT 57.216 34.615 0.00 0.00 44.77 2.24
736 1123 9.224267 ACATACCGATGTATATAGACGTACTTT 57.776 33.333 0.00 0.00 44.77 2.66
740 1127 9.149225 ACCGATGTATATAGACGTACTTTAGAG 57.851 37.037 0.00 0.00 0.00 2.43
741 1128 9.149225 CCGATGTATATAGACGTACTTTAGAGT 57.851 37.037 0.00 0.00 39.97 3.24
742 1129 9.955310 CGATGTATATAGACGTACTTTAGAGTG 57.045 37.037 0.00 0.00 36.60 3.51
750 1137 6.978338 AGACGTACTTTAGAGTGTTGATTCA 58.022 36.000 0.00 0.00 36.60 2.57
751 1138 7.603651 AGACGTACTTTAGAGTGTTGATTCAT 58.396 34.615 0.00 0.00 36.60 2.57
752 1139 8.088981 AGACGTACTTTAGAGTGTTGATTCATT 58.911 33.333 0.00 0.00 36.60 2.57
753 1140 8.240883 ACGTACTTTAGAGTGTTGATTCATTC 57.759 34.615 0.00 0.00 36.60 2.67
754 1141 7.870954 ACGTACTTTAGAGTGTTGATTCATTCA 59.129 33.333 0.00 0.00 36.60 2.57
755 1142 8.873830 CGTACTTTAGAGTGTTGATTCATTCAT 58.126 33.333 0.00 0.00 36.60 2.57
760 1147 8.746922 TTAGAGTGTTGATTCATTCATTTTGC 57.253 30.769 0.00 0.00 33.34 3.68
761 1148 6.989659 AGAGTGTTGATTCATTCATTTTGCT 58.010 32.000 0.00 0.00 33.34 3.91
762 1149 7.088905 AGAGTGTTGATTCATTCATTTTGCTC 58.911 34.615 0.00 0.00 33.34 4.26
763 1150 6.161381 AGTGTTGATTCATTCATTTTGCTCC 58.839 36.000 0.00 0.00 33.34 4.70
764 1151 5.061311 GTGTTGATTCATTCATTTTGCTCCG 59.939 40.000 0.00 0.00 33.34 4.63
765 1152 5.163513 GTTGATTCATTCATTTTGCTCCGT 58.836 37.500 0.00 0.00 33.34 4.69
766 1153 6.072230 TGTTGATTCATTCATTTTGCTCCGTA 60.072 34.615 0.00 0.00 33.34 4.02
767 1154 6.698008 TGATTCATTCATTTTGCTCCGTAT 57.302 33.333 0.00 0.00 0.00 3.06
768 1155 6.497437 TGATTCATTCATTTTGCTCCGTATG 58.503 36.000 0.00 0.00 0.00 2.39
769 1156 5.895636 TTCATTCATTTTGCTCCGTATGT 57.104 34.783 0.00 0.00 0.00 2.29
770 1157 6.993786 TTCATTCATTTTGCTCCGTATGTA 57.006 33.333 0.00 0.00 0.00 2.29
771 1158 6.603237 TCATTCATTTTGCTCCGTATGTAG 57.397 37.500 0.00 0.00 0.00 2.74
772 1159 6.112734 TCATTCATTTTGCTCCGTATGTAGT 58.887 36.000 0.00 0.00 0.00 2.73
773 1160 6.257849 TCATTCATTTTGCTCCGTATGTAGTC 59.742 38.462 0.00 0.00 0.00 2.59
774 1161 4.439057 TCATTTTGCTCCGTATGTAGTCC 58.561 43.478 0.00 0.00 0.00 3.85
775 1162 3.965379 TTTTGCTCCGTATGTAGTCCA 57.035 42.857 0.00 0.00 0.00 4.02
776 1163 4.481368 TTTTGCTCCGTATGTAGTCCAT 57.519 40.909 0.00 0.00 37.58 3.41
777 1164 5.601583 TTTTGCTCCGTATGTAGTCCATA 57.398 39.130 0.00 0.00 34.86 2.74
778 1165 4.848562 TTGCTCCGTATGTAGTCCATAG 57.151 45.455 0.00 0.00 36.71 2.23
779 1166 4.094830 TGCTCCGTATGTAGTCCATAGA 57.905 45.455 0.00 0.00 36.71 1.98
780 1167 4.072839 TGCTCCGTATGTAGTCCATAGAG 58.927 47.826 0.00 0.00 36.71 2.43
781 1168 3.440872 GCTCCGTATGTAGTCCATAGAGG 59.559 52.174 0.00 0.00 36.71 3.69
782 1169 4.806625 GCTCCGTATGTAGTCCATAGAGGA 60.807 50.000 0.00 0.00 46.75 3.71
797 1184 7.595819 CCATAGAGGAATGTCTAGAAAGACT 57.404 40.000 0.00 0.00 45.94 3.24
798 1185 8.017418 CCATAGAGGAATGTCTAGAAAGACTT 57.983 38.462 0.00 0.00 45.94 3.01
799 1186 9.137459 CCATAGAGGAATGTCTAGAAAGACTTA 57.863 37.037 0.00 0.00 45.94 2.24
860 1247 2.857592 GCATCTGCTTGTATTGGGTG 57.142 50.000 0.00 0.00 38.21 4.61
876 1263 2.158385 TGGGTGGTTTCATTAGTGCCTT 60.158 45.455 0.00 0.00 0.00 4.35
881 1268 3.820467 TGGTTTCATTAGTGCCTTGTCAG 59.180 43.478 0.00 0.00 0.00 3.51
945 1332 4.489771 AAGCGGGGCCTTCATCGG 62.490 66.667 0.84 0.00 0.00 4.18
962 1349 8.129211 CCTTCATCGGAAATTTATTTACCTCAC 58.871 37.037 0.00 0.00 31.35 3.51
993 1380 0.760567 TGTGCATCTAGATCCGCCCT 60.761 55.000 1.03 0.00 0.00 5.19
1033 1426 2.849880 GCTCACAACAAGCTTGTCAA 57.150 45.000 31.20 15.83 41.31 3.18
1245 1650 2.107366 CAACTCACAAGGTTTTGGGGT 58.893 47.619 0.00 0.00 38.29 4.95
1290 1699 6.482835 CGTAAGTTCTGAAATGTGAACAACA 58.517 36.000 8.28 0.00 43.38 3.33
1314 1723 1.254954 GTTGGTGACTCCCGTCTACT 58.745 55.000 0.00 0.00 40.86 2.57
1315 1724 1.201880 GTTGGTGACTCCCGTCTACTC 59.798 57.143 0.00 0.00 40.86 2.59
1316 1725 0.323178 TGGTGACTCCCGTCTACTCC 60.323 60.000 0.00 0.00 40.86 3.85
1317 1726 1.036481 GGTGACTCCCGTCTACTCCC 61.036 65.000 0.00 0.00 40.86 4.30
1318 1727 0.034283 GTGACTCCCGTCTACTCCCT 60.034 60.000 0.00 0.00 40.86 4.20
1319 1728 0.255318 TGACTCCCGTCTACTCCCTC 59.745 60.000 0.00 0.00 40.86 4.30
1320 1729 0.466007 GACTCCCGTCTACTCCCTCC 60.466 65.000 0.00 0.00 37.19 4.30
1321 1730 1.526455 CTCCCGTCTACTCCCTCCG 60.526 68.421 0.00 0.00 0.00 4.63
1322 1731 2.268167 CTCCCGTCTACTCCCTCCGT 62.268 65.000 0.00 0.00 0.00 4.69
1323 1732 1.379576 CCCGTCTACTCCCTCCGTT 60.380 63.158 0.00 0.00 0.00 4.44
1324 1733 1.382692 CCCGTCTACTCCCTCCGTTC 61.383 65.000 0.00 0.00 0.00 3.95
1325 1734 1.382692 CCGTCTACTCCCTCCGTTCC 61.383 65.000 0.00 0.00 0.00 3.62
1326 1735 0.679002 CGTCTACTCCCTCCGTTCCA 60.679 60.000 0.00 0.00 0.00 3.53
1327 1736 1.553706 GTCTACTCCCTCCGTTCCAA 58.446 55.000 0.00 0.00 0.00 3.53
1328 1737 1.897802 GTCTACTCCCTCCGTTCCAAA 59.102 52.381 0.00 0.00 0.00 3.28
1329 1738 2.301009 GTCTACTCCCTCCGTTCCAAAA 59.699 50.000 0.00 0.00 0.00 2.44
1330 1739 3.055312 GTCTACTCCCTCCGTTCCAAAAT 60.055 47.826 0.00 0.00 0.00 1.82
1331 1740 4.161001 GTCTACTCCCTCCGTTCCAAAATA 59.839 45.833 0.00 0.00 0.00 1.40
1332 1741 3.629142 ACTCCCTCCGTTCCAAAATAG 57.371 47.619 0.00 0.00 0.00 1.73
1333 1742 3.178865 ACTCCCTCCGTTCCAAAATAGA 58.821 45.455 0.00 0.00 0.00 1.98
1334 1743 3.780850 ACTCCCTCCGTTCCAAAATAGAT 59.219 43.478 0.00 0.00 0.00 1.98
1335 1744 4.130118 CTCCCTCCGTTCCAAAATAGATG 58.870 47.826 0.00 0.00 0.00 2.90
1336 1745 3.778075 TCCCTCCGTTCCAAAATAGATGA 59.222 43.478 0.00 0.00 0.00 2.92
1337 1746 3.877508 CCCTCCGTTCCAAAATAGATGAC 59.122 47.826 0.00 0.00 0.00 3.06
1338 1747 4.384208 CCCTCCGTTCCAAAATAGATGACT 60.384 45.833 0.00 0.00 0.00 3.41
1339 1748 4.811557 CCTCCGTTCCAAAATAGATGACTC 59.188 45.833 0.00 0.00 0.00 3.36
1340 1749 5.414789 TCCGTTCCAAAATAGATGACTCA 57.585 39.130 0.00 0.00 0.00 3.41
1341 1750 5.800296 TCCGTTCCAAAATAGATGACTCAA 58.200 37.500 0.00 0.00 0.00 3.02
1342 1751 5.642063 TCCGTTCCAAAATAGATGACTCAAC 59.358 40.000 0.00 0.00 0.00 3.18
1343 1752 5.643777 CCGTTCCAAAATAGATGACTCAACT 59.356 40.000 0.00 0.00 0.00 3.16
1344 1753 6.149474 CCGTTCCAAAATAGATGACTCAACTT 59.851 38.462 0.00 0.00 0.00 2.66
1345 1754 7.308589 CCGTTCCAAAATAGATGACTCAACTTT 60.309 37.037 0.00 0.00 0.00 2.66
1346 1755 7.535258 CGTTCCAAAATAGATGACTCAACTTTG 59.465 37.037 0.00 0.00 0.00 2.77
1347 1756 8.352942 GTTCCAAAATAGATGACTCAACTTTGT 58.647 33.333 0.00 0.00 0.00 2.83
1348 1757 9.567776 TTCCAAAATAGATGACTCAACTTTGTA 57.432 29.630 0.00 0.00 0.00 2.41
1349 1758 8.999431 TCCAAAATAGATGACTCAACTTTGTAC 58.001 33.333 0.00 0.00 0.00 2.90
1350 1759 9.003658 CCAAAATAGATGACTCAACTTTGTACT 57.996 33.333 0.00 0.00 0.00 2.73
1387 1796 8.574196 AAAGTTGAGTCATTTATTTTGGAACG 57.426 30.769 0.00 0.00 0.00 3.95
1388 1797 6.677913 AGTTGAGTCATTTATTTTGGAACGG 58.322 36.000 0.00 0.00 0.00 4.44
1389 1798 6.488683 AGTTGAGTCATTTATTTTGGAACGGA 59.511 34.615 0.00 0.00 0.00 4.69
1390 1799 6.494893 TGAGTCATTTATTTTGGAACGGAG 57.505 37.500 0.00 0.00 0.00 4.63
1391 1800 5.414454 TGAGTCATTTATTTTGGAACGGAGG 59.586 40.000 0.00 0.00 0.00 4.30
1392 1801 4.705023 AGTCATTTATTTTGGAACGGAGGG 59.295 41.667 0.00 0.00 0.00 4.30
1393 1802 4.703093 GTCATTTATTTTGGAACGGAGGGA 59.297 41.667 0.00 0.00 0.00 4.20
1394 1803 4.947388 TCATTTATTTTGGAACGGAGGGAG 59.053 41.667 0.00 0.00 0.00 4.30
1395 1804 4.376225 TTTATTTTGGAACGGAGGGAGT 57.624 40.909 0.00 0.00 0.00 3.85
1396 1805 5.502089 TTTATTTTGGAACGGAGGGAGTA 57.498 39.130 0.00 0.00 0.00 2.59
1397 1806 2.845363 TTTTGGAACGGAGGGAGTAC 57.155 50.000 0.00 0.00 0.00 2.73
1399 1808 1.719529 TTGGAACGGAGGGAGTACAA 58.280 50.000 0.00 0.00 0.00 2.41
1423 1832 1.160329 AGAGCTGTTTGTGTCGTGCC 61.160 55.000 0.00 0.00 0.00 5.01
1459 1872 1.684450 TGTTTGTGTCGAGCTCTGGTA 59.316 47.619 12.85 0.00 0.00 3.25
1498 1914 3.103742 ACATTGTTTGGTTTGTGTCCCT 58.896 40.909 0.00 0.00 0.00 4.20
1711 2136 7.229707 GCAGTGGAAGAGATGTTCTACTAGATA 59.770 40.741 8.14 0.00 44.03 1.98
1728 2155 9.549509 CTACTAGATATGCGATTCAGTTAGTTC 57.450 37.037 0.00 0.00 0.00 3.01
1959 2612 7.260387 TCTACACAAACTTGGAATATGGGTA 57.740 36.000 0.00 0.00 0.00 3.69
1977 2634 5.139727 TGGGTAAGCCATATTTTGGATGAG 58.860 41.667 0.00 0.00 45.64 2.90
2006 2663 8.662781 TTTTCTTTGAATCATATACTCCTCCG 57.337 34.615 0.00 0.00 0.00 4.63
2007 2664 6.978674 TCTTTGAATCATATACTCCTCCGT 57.021 37.500 0.00 0.00 0.00 4.69
2008 2665 6.982852 TCTTTGAATCATATACTCCTCCGTC 58.017 40.000 0.00 0.00 0.00 4.79
2009 2666 5.723672 TTGAATCATATACTCCTCCGTCC 57.276 43.478 0.00 0.00 0.00 4.79
2010 2667 3.756963 TGAATCATATACTCCTCCGTCCG 59.243 47.826 0.00 0.00 0.00 4.79
2011 2668 2.195741 TCATATACTCCTCCGTCCGG 57.804 55.000 0.00 0.00 0.00 5.14
2012 2669 1.701292 TCATATACTCCTCCGTCCGGA 59.299 52.381 0.00 0.00 42.90 5.14
2015 2672 2.083628 ATACTCCTCCGTCCGGAAAT 57.916 50.000 5.23 0.00 44.66 2.17
2016 2673 2.734755 TACTCCTCCGTCCGGAAATA 57.265 50.000 5.23 0.00 44.66 1.40
2017 2674 1.109609 ACTCCTCCGTCCGGAAATAC 58.890 55.000 5.23 0.00 44.66 1.89
2019 2676 1.337387 CTCCTCCGTCCGGAAATACTC 59.663 57.143 5.23 0.00 44.66 2.59
2021 2678 0.737219 CTCCGTCCGGAAATACTCGT 59.263 55.000 5.23 0.00 44.66 4.18
2027 3736 2.165030 GTCCGGAAATACTCGTTGGAGA 59.835 50.000 5.23 0.00 43.27 3.71
2029 3738 3.258872 TCCGGAAATACTCGTTGGAGAAA 59.741 43.478 0.00 0.00 43.27 2.52
2031 3740 4.034048 CCGGAAATACTCGTTGGAGAAATG 59.966 45.833 0.00 0.00 43.27 2.32
2034 3743 5.066505 GGAAATACTCGTTGGAGAAATGCAT 59.933 40.000 0.00 0.00 43.27 3.96
2039 3748 6.325919 ACTCGTTGGAGAAATGCATAAAAA 57.674 33.333 0.00 0.00 43.27 1.94
2042 3751 6.098679 TCGTTGGAGAAATGCATAAAAATGG 58.901 36.000 0.00 0.00 0.00 3.16
2045 3754 7.254185 CGTTGGAGAAATGCATAAAAATGGATG 60.254 37.037 0.00 0.00 32.82 3.51
2048 4120 8.926374 TGGAGAAATGCATAAAAATGGATGTAT 58.074 29.630 0.00 0.00 32.82 2.29
2064 4136 9.712305 AATGGATGTATCTAGAACTAAAATCCG 57.288 33.333 0.00 0.00 34.97 4.18
2065 4137 8.246430 TGGATGTATCTAGAACTAAAATCCGT 57.754 34.615 0.00 0.00 34.97 4.69
2066 4138 8.358148 TGGATGTATCTAGAACTAAAATCCGTC 58.642 37.037 0.00 0.00 34.97 4.79
2070 4142 9.842775 TGTATCTAGAACTAAAATCCGTCTAGA 57.157 33.333 10.27 10.27 38.94 2.43
2073 4145 7.649973 TCTAGAACTAAAATCCGTCTAGATGC 58.350 38.462 6.42 0.00 32.48 3.91
2074 4146 6.222038 AGAACTAAAATCCGTCTAGATGCA 57.778 37.500 6.42 0.00 0.00 3.96
2075 4147 6.821388 AGAACTAAAATCCGTCTAGATGCAT 58.179 36.000 0.00 0.00 0.00 3.96
2076 4148 6.926272 AGAACTAAAATCCGTCTAGATGCATC 59.074 38.462 19.37 19.37 0.00 3.91
2077 4149 5.542779 ACTAAAATCCGTCTAGATGCATCC 58.457 41.667 23.06 6.84 0.00 3.51
2078 4150 2.732412 AATCCGTCTAGATGCATCCG 57.268 50.000 23.06 17.94 0.00 4.18
2079 4151 1.621992 ATCCGTCTAGATGCATCCGT 58.378 50.000 23.06 8.39 0.00 4.69
2080 4152 1.399714 TCCGTCTAGATGCATCCGTT 58.600 50.000 23.06 7.62 0.00 4.44
2081 4153 1.337071 TCCGTCTAGATGCATCCGTTC 59.663 52.381 23.06 10.63 0.00 3.95
2083 4155 1.338337 CGTCTAGATGCATCCGTTCCT 59.662 52.381 23.06 6.10 0.00 3.36
2084 4156 2.605823 CGTCTAGATGCATCCGTTCCTC 60.606 54.545 23.06 6.86 0.00 3.71
2085 4157 1.964223 TCTAGATGCATCCGTTCCTCC 59.036 52.381 23.06 0.00 0.00 4.30
2086 4158 0.673985 TAGATGCATCCGTTCCTCCG 59.326 55.000 23.06 0.00 0.00 4.63
2087 4159 1.043116 AGATGCATCCGTTCCTCCGA 61.043 55.000 23.06 0.00 0.00 4.55
2088 4160 0.876342 GATGCATCCGTTCCTCCGAC 60.876 60.000 16.23 0.00 0.00 4.79
2091 4163 1.084370 GCATCCGTTCCTCCGACAAG 61.084 60.000 0.00 0.00 0.00 3.16
2171 5836 4.682860 GCTCTTTGTCAAACATTCATGTGG 59.317 41.667 0.00 0.00 41.61 4.17
2194 5859 6.012333 TGGTATCTGTTTTAAGCCCCTCTTTA 60.012 38.462 0.00 0.00 36.25 1.85
2195 5860 7.061054 GGTATCTGTTTTAAGCCCCTCTTTAT 58.939 38.462 0.00 0.00 36.25 1.40
2196 5861 7.560262 GGTATCTGTTTTAAGCCCCTCTTTATT 59.440 37.037 0.00 0.00 36.25 1.40
2197 5862 9.623000 GTATCTGTTTTAAGCCCCTCTTTATTA 57.377 33.333 0.00 0.00 36.25 0.98
2240 5905 3.998913 TGGATAGGATGCAACAACTCA 57.001 42.857 0.00 0.00 0.00 3.41
2245 5910 1.884579 AGGATGCAACAACTCAGCAAG 59.115 47.619 0.00 0.00 42.15 4.01
2520 6199 2.502947 AGCAAGCTCATGTCACCTCATA 59.497 45.455 0.00 0.00 0.00 2.15
2547 6226 4.391216 CAGTGCTGAAGACAGGTCTAAATG 59.609 45.833 1.78 0.00 43.62 2.32
2647 6326 5.500234 CCAAGTTTCTGTATCTGATGGGAA 58.500 41.667 0.00 0.00 0.00 3.97
2712 6391 7.366847 AGCTGAGAAGTTTAGGCTATATCAA 57.633 36.000 0.00 0.00 0.00 2.57
2733 6412 6.644347 TCAAATCTAAAACAGGAGAGGCTAG 58.356 40.000 0.00 0.00 0.00 3.42
2742 6421 1.745264 GAGAGGCTAGCGCTTCCAT 59.255 57.895 18.68 10.41 42.73 3.41
2757 6436 4.133078 GCTTCCATAACTCCTTGATCCAG 58.867 47.826 0.00 0.00 0.00 3.86
2784 6463 4.159693 ACGCTGATGGATACTTGTGAACTA 59.840 41.667 0.00 0.00 37.61 2.24
2812 6491 7.633193 AGTCAATCGTAGAGAAAGTCACTAT 57.367 36.000 0.00 0.00 43.63 2.12
2875 6554 0.899720 CGGGGGCTTACTGAGTGTAA 59.100 55.000 0.00 0.00 38.67 2.41
2966 6645 2.947652 GCAAGTATCACATCTGGCATGT 59.052 45.455 0.00 0.00 31.57 3.21
2975 6655 3.188254 CACATCTGGCATGTTTTACACGA 59.812 43.478 0.00 0.00 0.00 4.35
3007 6689 0.108138 AGGTTGTGCGCCATCTACTC 60.108 55.000 4.18 0.00 0.00 2.59
3035 6717 1.342174 GTCTCACGTGTGGAACCCTAA 59.658 52.381 16.51 0.00 34.36 2.69
3072 6754 3.243501 TGCTCACAGAAATGAACTTTGCC 60.244 43.478 0.00 0.00 0.00 4.52
3103 6786 2.682856 TGAGCCGTGCCTTTATTGAATC 59.317 45.455 0.00 0.00 0.00 2.52
3239 6922 6.037172 CAGTTTTATTAAGGGGATCACGAGTG 59.963 42.308 0.00 0.00 0.00 3.51
3318 7001 8.894768 AAGAGCTTAACATGGATATGTAAGTC 57.105 34.615 0.00 0.00 46.54 3.01
3331 7014 6.647067 GGATATGTAAGTCAGGTGTGCTAATC 59.353 42.308 0.00 0.00 0.00 1.75
3392 7075 6.265196 TGTTCTATTCTTTCCTGCAACACATT 59.735 34.615 0.00 0.00 0.00 2.71
3418 7101 4.342092 AGTTTTAGCCAACACAGCAAATCT 59.658 37.500 0.00 0.00 0.00 2.40
3427 7110 4.510038 ACACAGCAAATCTCAATGAACC 57.490 40.909 0.00 0.00 0.00 3.62
3428 7111 4.147321 ACACAGCAAATCTCAATGAACCT 58.853 39.130 0.00 0.00 0.00 3.50
3439 7122 4.594920 TCTCAATGAACCTGAACTCCTCTT 59.405 41.667 0.00 0.00 0.00 2.85
3440 7123 5.780282 TCTCAATGAACCTGAACTCCTCTTA 59.220 40.000 0.00 0.00 0.00 2.10
3441 7124 5.794894 TCAATGAACCTGAACTCCTCTTAC 58.205 41.667 0.00 0.00 0.00 2.34
3463 7147 6.803366 ACTACCTTTTAAGACGGGATATGT 57.197 37.500 0.00 0.00 0.00 2.29
3518 7202 6.558009 TCGTTGATAGCGAACTATAGTTGTT 58.442 36.000 22.68 14.15 39.28 2.83
3519 7203 6.471198 TCGTTGATAGCGAACTATAGTTGTTG 59.529 38.462 22.68 12.66 39.28 3.33
3520 7204 6.252869 CGTTGATAGCGAACTATAGTTGTTGT 59.747 38.462 22.68 10.82 39.28 3.32
3521 7205 7.430211 CGTTGATAGCGAACTATAGTTGTTGTA 59.570 37.037 22.68 8.96 39.28 2.41
3522 7206 9.079833 GTTGATAGCGAACTATAGTTGTTGTAA 57.920 33.333 22.68 6.55 39.28 2.41
3523 7207 9.811995 TTGATAGCGAACTATAGTTGTTGTAAT 57.188 29.630 22.68 8.32 39.28 1.89
3528 7212 9.298774 AGCGAACTATAGTTGTTGTAATAAGTC 57.701 33.333 22.68 2.85 38.56 3.01
3529 7213 9.079833 GCGAACTATAGTTGTTGTAATAAGTCA 57.920 33.333 22.68 0.00 38.56 3.41
3547 7231 5.453567 AGTCATCTTTTAGTTTGTTGGCC 57.546 39.130 0.00 0.00 0.00 5.36
3548 7232 4.892934 AGTCATCTTTTAGTTTGTTGGCCA 59.107 37.500 0.00 0.00 0.00 5.36
3549 7233 5.010012 AGTCATCTTTTAGTTTGTTGGCCAG 59.990 40.000 5.11 0.00 0.00 4.85
3550 7234 3.726291 TCTTTTAGTTTGTTGGCCAGC 57.274 42.857 13.50 13.50 0.00 4.85
3551 7235 3.295973 TCTTTTAGTTTGTTGGCCAGCT 58.704 40.909 21.11 10.49 0.00 4.24
3552 7236 3.704061 TCTTTTAGTTTGTTGGCCAGCTT 59.296 39.130 21.11 6.45 0.00 3.74
3553 7237 3.726291 TTTAGTTTGTTGGCCAGCTTC 57.274 42.857 21.11 10.56 0.00 3.86
3554 7238 1.616159 TAGTTTGTTGGCCAGCTTCC 58.384 50.000 21.11 7.88 0.00 3.46
3555 7239 0.106015 AGTTTGTTGGCCAGCTTCCT 60.106 50.000 21.11 10.02 0.00 3.36
3556 7240 0.032540 GTTTGTTGGCCAGCTTCCTG 59.967 55.000 21.11 0.00 38.85 3.86
3557 7241 0.106268 TTTGTTGGCCAGCTTCCTGA 60.106 50.000 21.11 0.00 41.77 3.86
3558 7242 0.823356 TTGTTGGCCAGCTTCCTGAC 60.823 55.000 21.11 7.07 41.77 3.51
3559 7243 1.073897 GTTGGCCAGCTTCCTGACT 59.926 57.895 13.08 0.00 41.77 3.41
3560 7244 0.324943 GTTGGCCAGCTTCCTGACTA 59.675 55.000 13.08 0.00 41.77 2.59
3561 7245 1.065126 GTTGGCCAGCTTCCTGACTAT 60.065 52.381 13.08 0.00 41.77 2.12
3562 7246 0.543277 TGGCCAGCTTCCTGACTATG 59.457 55.000 0.00 0.00 41.77 2.23
3563 7247 0.543749 GGCCAGCTTCCTGACTATGT 59.456 55.000 0.00 0.00 41.77 2.29
3564 7248 1.065126 GGCCAGCTTCCTGACTATGTT 60.065 52.381 0.00 0.00 41.77 2.71
3565 7249 2.012673 GCCAGCTTCCTGACTATGTTG 58.987 52.381 0.00 0.00 41.77 3.33
3566 7250 2.616510 GCCAGCTTCCTGACTATGTTGT 60.617 50.000 0.00 0.00 41.77 3.32
3567 7251 3.265791 CCAGCTTCCTGACTATGTTGTC 58.734 50.000 0.00 0.00 41.77 3.18
3568 7252 3.306989 CCAGCTTCCTGACTATGTTGTCA 60.307 47.826 0.00 0.00 43.72 3.58
3578 7262 5.853936 TGACTATGTTGTCAGTAAGCTTGT 58.146 37.500 9.86 0.00 41.43 3.16
3579 7263 6.988522 TGACTATGTTGTCAGTAAGCTTGTA 58.011 36.000 9.86 0.00 41.43 2.41
3580 7264 7.090808 TGACTATGTTGTCAGTAAGCTTGTAG 58.909 38.462 9.86 0.00 41.43 2.74
3581 7265 7.039993 TGACTATGTTGTCAGTAAGCTTGTAGA 60.040 37.037 9.86 0.55 41.43 2.59
3582 7266 7.841956 ACTATGTTGTCAGTAAGCTTGTAGAT 58.158 34.615 9.86 0.00 0.00 1.98
3583 7267 6.974932 ATGTTGTCAGTAAGCTTGTAGATG 57.025 37.500 9.86 0.68 0.00 2.90
3584 7268 6.096673 TGTTGTCAGTAAGCTTGTAGATGA 57.903 37.500 9.86 3.17 0.00 2.92
3585 7269 6.701340 TGTTGTCAGTAAGCTTGTAGATGAT 58.299 36.000 9.86 0.00 0.00 2.45
3586 7270 7.836842 TGTTGTCAGTAAGCTTGTAGATGATA 58.163 34.615 9.86 1.82 0.00 2.15
3587 7271 8.478066 TGTTGTCAGTAAGCTTGTAGATGATAT 58.522 33.333 9.86 0.00 0.00 1.63
3588 7272 9.967346 GTTGTCAGTAAGCTTGTAGATGATATA 57.033 33.333 9.86 0.00 0.00 0.86
3617 7301 8.458843 TGTGTTTTGATCTTAATAAAGCTAGCC 58.541 33.333 12.13 0.00 32.36 3.93
3618 7302 8.458843 GTGTTTTGATCTTAATAAAGCTAGCCA 58.541 33.333 12.13 0.00 32.36 4.75
3619 7303 9.189156 TGTTTTGATCTTAATAAAGCTAGCCAT 57.811 29.630 12.13 2.74 32.36 4.40
3620 7304 9.455847 GTTTTGATCTTAATAAAGCTAGCCATG 57.544 33.333 12.13 0.00 32.36 3.66
3621 7305 7.750229 TTGATCTTAATAAAGCTAGCCATGG 57.250 36.000 12.13 7.63 32.36 3.66
3622 7306 6.841601 TGATCTTAATAAAGCTAGCCATGGT 58.158 36.000 14.67 2.69 32.36 3.55
3623 7307 6.712095 TGATCTTAATAAAGCTAGCCATGGTG 59.288 38.462 14.67 5.41 32.36 4.17
3624 7308 5.376625 TCTTAATAAAGCTAGCCATGGTGG 58.623 41.667 14.67 5.03 34.99 4.61
3625 7309 6.208832 TCTTAATAAAGCTAGCCATGGTGGC 61.209 44.000 14.67 12.93 47.00 5.01
3633 7317 2.994699 CCATGGTGGCCTTCCGTA 59.005 61.111 3.32 0.00 34.14 4.02
3634 7318 1.301623 CCATGGTGGCCTTCCGTAA 59.698 57.895 3.32 0.00 34.14 3.18
3635 7319 0.322997 CCATGGTGGCCTTCCGTAAA 60.323 55.000 3.32 0.00 34.14 2.01
3636 7320 1.540267 CATGGTGGCCTTCCGTAAAA 58.460 50.000 3.32 0.00 34.14 1.52
3637 7321 1.201414 CATGGTGGCCTTCCGTAAAAC 59.799 52.381 3.32 0.00 34.14 2.43
3638 7322 0.183014 TGGTGGCCTTCCGTAAAACA 59.817 50.000 3.32 0.00 34.14 2.83
3639 7323 1.320507 GGTGGCCTTCCGTAAAACAA 58.679 50.000 3.32 0.00 34.14 2.83
3640 7324 1.890489 GGTGGCCTTCCGTAAAACAAT 59.110 47.619 3.32 0.00 34.14 2.71
3641 7325 3.083293 GGTGGCCTTCCGTAAAACAATA 58.917 45.455 3.32 0.00 34.14 1.90
3642 7326 3.128068 GGTGGCCTTCCGTAAAACAATAG 59.872 47.826 3.32 0.00 34.14 1.73
3643 7327 4.004982 GTGGCCTTCCGTAAAACAATAGA 58.995 43.478 3.32 0.00 34.14 1.98
3644 7328 4.004982 TGGCCTTCCGTAAAACAATAGAC 58.995 43.478 3.32 0.00 34.14 2.59
3645 7329 3.063045 GGCCTTCCGTAAAACAATAGACG 59.937 47.826 0.00 0.00 35.12 4.18
3653 7337 6.907206 CGTAAAACAATAGACGGGGAATAA 57.093 37.500 0.00 0.00 0.00 1.40
3654 7338 6.940714 CGTAAAACAATAGACGGGGAATAAG 58.059 40.000 0.00 0.00 0.00 1.73
3655 7339 5.830000 AAAACAATAGACGGGGAATAAGC 57.170 39.130 0.00 0.00 0.00 3.09
3656 7340 4.497291 AACAATAGACGGGGAATAAGCA 57.503 40.909 0.00 0.00 0.00 3.91
3657 7341 4.706842 ACAATAGACGGGGAATAAGCAT 57.293 40.909 0.00 0.00 0.00 3.79
3658 7342 5.818678 ACAATAGACGGGGAATAAGCATA 57.181 39.130 0.00 0.00 0.00 3.14
3659 7343 5.548406 ACAATAGACGGGGAATAAGCATAC 58.452 41.667 0.00 0.00 0.00 2.39
3660 7344 5.071250 ACAATAGACGGGGAATAAGCATACA 59.929 40.000 0.00 0.00 0.00 2.29
3661 7345 6.173339 CAATAGACGGGGAATAAGCATACAT 58.827 40.000 0.00 0.00 0.00 2.29
3662 7346 4.008074 AGACGGGGAATAAGCATACATG 57.992 45.455 0.00 0.00 0.00 3.21
3663 7347 3.074412 GACGGGGAATAAGCATACATGG 58.926 50.000 0.00 0.00 0.00 3.66
3664 7348 2.224769 ACGGGGAATAAGCATACATGGG 60.225 50.000 0.00 0.00 0.00 4.00
3665 7349 2.171003 GGGGAATAAGCATACATGGGC 58.829 52.381 0.00 0.00 0.00 5.36
3666 7350 2.225117 GGGGAATAAGCATACATGGGCT 60.225 50.000 0.00 0.00 43.46 5.19
3667 7351 2.821969 GGGAATAAGCATACATGGGCTG 59.178 50.000 9.17 0.00 40.93 4.85
3668 7352 2.229784 GGAATAAGCATACATGGGCTGC 59.770 50.000 9.17 8.56 40.93 5.25
3670 7354 1.971481 TAAGCATACATGGGCTGCTG 58.029 50.000 16.50 0.00 45.10 4.41
3671 7355 1.389609 AAGCATACATGGGCTGCTGC 61.390 55.000 16.50 7.10 45.10 5.25
3672 7356 3.028130 CATACATGGGCTGCTGCG 58.972 61.111 9.65 0.00 40.82 5.18
3673 7357 1.820906 CATACATGGGCTGCTGCGT 60.821 57.895 9.65 4.41 40.82 5.24
3674 7358 1.820906 ATACATGGGCTGCTGCGTG 60.821 57.895 9.65 10.44 40.82 5.34
3685 7369 2.333938 CTGCGTGCTGCTGCTTTT 59.666 55.556 17.00 0.00 46.63 2.27
3686 7370 1.575922 CTGCGTGCTGCTGCTTTTA 59.424 52.632 17.00 0.67 46.63 1.52
3687 7371 0.169672 CTGCGTGCTGCTGCTTTTAT 59.830 50.000 17.00 0.00 46.63 1.40
3688 7372 0.597568 TGCGTGCTGCTGCTTTTATT 59.402 45.000 17.00 0.00 46.63 1.40
3689 7373 1.000385 TGCGTGCTGCTGCTTTTATTT 60.000 42.857 17.00 0.00 46.63 1.40
3690 7374 2.061028 GCGTGCTGCTGCTTTTATTTT 58.939 42.857 17.00 0.00 41.73 1.82
3691 7375 2.476241 GCGTGCTGCTGCTTTTATTTTT 59.524 40.909 17.00 0.00 41.73 1.94
3721 7405 9.677567 GTGATGAAAACACTTTATCAGCTTAAA 57.322 29.630 0.00 0.00 36.60 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 0.734889 GAATTGGGCACATCTCCGTG 59.265 55.000 0.00 0.00 40.00 4.94
17 18 0.620556 AGAATTGGGCACATCTCCGT 59.379 50.000 0.00 0.00 0.00 4.69
18 19 1.019673 CAGAATTGGGCACATCTCCG 58.980 55.000 0.00 0.00 0.00 4.63
19 20 1.064463 TCCAGAATTGGGCACATCTCC 60.064 52.381 0.00 0.00 45.10 3.71
20 21 2.425143 TCCAGAATTGGGCACATCTC 57.575 50.000 0.00 0.00 45.10 2.75
21 22 2.662866 CATCCAGAATTGGGCACATCT 58.337 47.619 0.00 0.00 45.10 2.90
22 23 1.068127 GCATCCAGAATTGGGCACATC 59.932 52.381 0.00 0.00 45.10 3.06
23 24 1.117150 GCATCCAGAATTGGGCACAT 58.883 50.000 0.00 0.00 45.10 3.21
24 25 0.251698 TGCATCCAGAATTGGGCACA 60.252 50.000 0.00 0.00 45.10 4.57
25 26 0.896923 TTGCATCCAGAATTGGGCAC 59.103 50.000 0.00 0.00 45.10 5.01
26 27 1.758280 GATTGCATCCAGAATTGGGCA 59.242 47.619 0.00 0.00 45.10 5.36
27 28 2.037144 AGATTGCATCCAGAATTGGGC 58.963 47.619 0.00 0.00 45.10 5.36
28 29 3.293337 TCAGATTGCATCCAGAATTGGG 58.707 45.455 0.00 0.00 45.10 4.12
29 30 4.994907 TTCAGATTGCATCCAGAATTGG 57.005 40.909 0.00 0.00 46.49 3.16
30 31 6.160684 TGTTTTCAGATTGCATCCAGAATTG 58.839 36.000 0.00 0.00 0.00 2.32
31 32 6.349243 TGTTTTCAGATTGCATCCAGAATT 57.651 33.333 0.00 0.00 0.00 2.17
32 33 5.988310 TGTTTTCAGATTGCATCCAGAAT 57.012 34.783 0.00 0.00 0.00 2.40
33 34 5.787953 TTGTTTTCAGATTGCATCCAGAA 57.212 34.783 0.00 0.00 0.00 3.02
34 35 5.713389 AGATTGTTTTCAGATTGCATCCAGA 59.287 36.000 0.00 0.00 0.00 3.86
35 36 5.805486 CAGATTGTTTTCAGATTGCATCCAG 59.195 40.000 0.00 0.00 0.00 3.86
36 37 5.716094 CAGATTGTTTTCAGATTGCATCCA 58.284 37.500 0.00 0.00 0.00 3.41
37 38 4.565564 GCAGATTGTTTTCAGATTGCATCC 59.434 41.667 0.00 0.00 0.00 3.51
38 39 5.408356 AGCAGATTGTTTTCAGATTGCATC 58.592 37.500 0.00 0.00 0.00 3.91
39 40 5.185249 AGAGCAGATTGTTTTCAGATTGCAT 59.815 36.000 0.00 0.00 0.00 3.96
40 41 4.521639 AGAGCAGATTGTTTTCAGATTGCA 59.478 37.500 0.00 0.00 0.00 4.08
41 42 5.056894 AGAGCAGATTGTTTTCAGATTGC 57.943 39.130 0.00 0.00 0.00 3.56
42 43 6.497785 AGAGAGCAGATTGTTTTCAGATTG 57.502 37.500 0.00 0.00 0.00 2.67
43 44 6.150809 GGAAGAGAGCAGATTGTTTTCAGATT 59.849 38.462 0.00 0.00 0.00 2.40
44 45 5.647225 GGAAGAGAGCAGATTGTTTTCAGAT 59.353 40.000 0.00 0.00 0.00 2.90
45 46 4.999950 GGAAGAGAGCAGATTGTTTTCAGA 59.000 41.667 0.00 0.00 0.00 3.27
46 47 5.002516 AGGAAGAGAGCAGATTGTTTTCAG 58.997 41.667 0.00 0.00 0.00 3.02
47 48 4.758674 CAGGAAGAGAGCAGATTGTTTTCA 59.241 41.667 0.00 0.00 0.00 2.69
48 49 4.379290 GCAGGAAGAGAGCAGATTGTTTTC 60.379 45.833 0.00 0.00 0.00 2.29
49 50 3.505293 GCAGGAAGAGAGCAGATTGTTTT 59.495 43.478 0.00 0.00 0.00 2.43
50 51 3.080319 GCAGGAAGAGAGCAGATTGTTT 58.920 45.455 0.00 0.00 0.00 2.83
51 52 2.039480 TGCAGGAAGAGAGCAGATTGTT 59.961 45.455 0.00 0.00 33.75 2.83
52 53 1.627329 TGCAGGAAGAGAGCAGATTGT 59.373 47.619 0.00 0.00 33.75 2.71
53 54 2.008329 GTGCAGGAAGAGAGCAGATTG 58.992 52.381 0.00 0.00 39.21 2.67
54 55 1.405256 CGTGCAGGAAGAGAGCAGATT 60.405 52.381 0.00 0.00 39.21 2.40
55 56 0.175302 CGTGCAGGAAGAGAGCAGAT 59.825 55.000 0.00 0.00 39.21 2.90
56 57 1.588597 CGTGCAGGAAGAGAGCAGA 59.411 57.895 0.00 0.00 39.21 4.26
57 58 2.099431 GCGTGCAGGAAGAGAGCAG 61.099 63.158 11.29 0.00 39.21 4.24
58 59 2.047844 GCGTGCAGGAAGAGAGCA 60.048 61.111 11.29 0.00 35.63 4.26
59 60 0.952984 AAAGCGTGCAGGAAGAGAGC 60.953 55.000 11.29 0.00 0.00 4.09
60 61 0.795085 CAAAGCGTGCAGGAAGAGAG 59.205 55.000 11.29 0.00 0.00 3.20
61 62 0.106708 ACAAAGCGTGCAGGAAGAGA 59.893 50.000 11.29 0.00 0.00 3.10
62 63 0.236711 CACAAAGCGTGCAGGAAGAG 59.763 55.000 11.29 0.00 39.19 2.85
63 64 2.320215 CACAAAGCGTGCAGGAAGA 58.680 52.632 11.29 0.00 39.19 2.87
64 65 4.929198 CACAAAGCGTGCAGGAAG 57.071 55.556 11.29 0.00 39.19 3.46
104 105 4.263068 GGATCGGTCCCTCACATCATTATT 60.263 45.833 2.19 0.00 38.69 1.40
106 107 2.632996 GGATCGGTCCCTCACATCATTA 59.367 50.000 2.19 0.00 38.69 1.90
122 123 3.365291 TTTCCCAGCCGTCGGATCG 62.365 63.158 17.49 0.00 0.00 3.69
176 177 4.509737 GTCTACCGACGCCAGCCC 62.510 72.222 0.00 0.00 0.00 5.19
188 189 3.524606 TGCTAGCCGGCGGTCTAC 61.525 66.667 28.82 20.08 34.52 2.59
215 216 1.372087 CGCTGTCTCTGGGATTTGCC 61.372 60.000 0.00 0.00 0.00 4.52
216 217 1.986575 GCGCTGTCTCTGGGATTTGC 61.987 60.000 0.00 0.00 0.00 3.68
217 218 0.392193 AGCGCTGTCTCTGGGATTTG 60.392 55.000 10.39 0.00 0.00 2.32
218 219 0.392193 CAGCGCTGTCTCTGGGATTT 60.392 55.000 29.24 0.00 0.00 2.17
219 220 1.220206 CAGCGCTGTCTCTGGGATT 59.780 57.895 29.24 0.00 0.00 3.01
220 221 2.729479 CCAGCGCTGTCTCTGGGAT 61.729 63.158 33.75 0.00 44.64 3.85
221 222 3.385384 CCAGCGCTGTCTCTGGGA 61.385 66.667 33.75 0.00 44.64 4.37
224 225 4.079850 AGGCCAGCGCTGTCTCTG 62.080 66.667 33.75 20.03 34.44 3.35
225 226 3.768922 GAGGCCAGCGCTGTCTCT 61.769 66.667 32.64 26.84 34.44 3.10
240 241 1.355066 GAGAAAGGCTTGCGTCCGAG 61.355 60.000 0.00 0.00 0.00 4.63
249 250 1.004161 GCCAGAAGAGGAGAAAGGCTT 59.996 52.381 0.00 0.00 37.67 4.35
258 259 1.343075 ACCCTAATCGCCAGAAGAGGA 60.343 52.381 0.00 0.00 35.45 3.71
344 352 4.743125 TGTATGTGGGGGCGGGGA 62.743 66.667 0.00 0.00 0.00 4.81
346 354 4.499633 GGTGTATGTGGGGGCGGG 62.500 72.222 0.00 0.00 0.00 6.13
347 355 3.400599 GAGGTGTATGTGGGGGCGG 62.401 68.421 0.00 0.00 0.00 6.13
348 356 2.189521 GAGGTGTATGTGGGGGCG 59.810 66.667 0.00 0.00 0.00 6.13
349 357 2.595655 GGAGGTGTATGTGGGGGC 59.404 66.667 0.00 0.00 0.00 5.80
350 358 1.968050 GACGGAGGTGTATGTGGGGG 61.968 65.000 0.00 0.00 0.00 5.40
351 359 1.520666 GACGGAGGTGTATGTGGGG 59.479 63.158 0.00 0.00 0.00 4.96
352 360 1.141019 CGACGGAGGTGTATGTGGG 59.859 63.158 0.00 0.00 0.00 4.61
355 363 1.945354 CTGGCGACGGAGGTGTATGT 61.945 60.000 0.00 0.00 39.98 2.29
453 840 2.663196 CGAAGAGGTGGTGGTCCC 59.337 66.667 0.00 0.00 0.00 4.46
466 853 4.421479 AGTGGCCTCGTCGCGAAG 62.421 66.667 12.06 14.48 34.74 3.79
523 910 1.279152 CGCTGAAGCAGATGACAGAG 58.721 55.000 2.79 0.00 42.21 3.35
536 923 2.203337 AAACCTGCAGCCGCTGAA 60.203 55.556 24.80 13.31 39.30 3.02
555 942 2.573462 TCAACTAGAAAGGCTGGAGCAT 59.427 45.455 0.00 0.00 44.36 3.79
603 990 8.793592 ACACCAAATTTCTAAGATACCAAGAAC 58.206 33.333 0.00 0.00 0.00 3.01
606 993 9.449719 AGTACACCAAATTTCTAAGATACCAAG 57.550 33.333 0.00 0.00 0.00 3.61
680 1067 9.405587 CCGCATTGAAATTTCTAAAAAGACTTA 57.594 29.630 18.64 0.00 0.00 2.24
681 1068 8.141268 TCCGCATTGAAATTTCTAAAAAGACTT 58.859 29.630 18.64 0.00 0.00 3.01
682 1069 7.595130 GTCCGCATTGAAATTTCTAAAAAGACT 59.405 33.333 18.64 0.00 0.00 3.24
683 1070 7.595130 AGTCCGCATTGAAATTTCTAAAAAGAC 59.405 33.333 18.64 16.54 0.00 3.01
684 1071 7.657336 AGTCCGCATTGAAATTTCTAAAAAGA 58.343 30.769 18.64 6.99 0.00 2.52
685 1072 7.873739 AGTCCGCATTGAAATTTCTAAAAAG 57.126 32.000 18.64 4.07 0.00 2.27
686 1073 8.353684 TGTAGTCCGCATTGAAATTTCTAAAAA 58.646 29.630 18.64 5.53 0.00 1.94
687 1074 7.877003 TGTAGTCCGCATTGAAATTTCTAAAA 58.123 30.769 18.64 5.88 0.00 1.52
688 1075 7.441890 TGTAGTCCGCATTGAAATTTCTAAA 57.558 32.000 18.64 6.58 0.00 1.85
689 1076 7.624360 ATGTAGTCCGCATTGAAATTTCTAA 57.376 32.000 18.64 11.53 0.00 2.10
690 1077 7.225931 GGTATGTAGTCCGCATTGAAATTTCTA 59.774 37.037 18.64 12.00 0.00 2.10
691 1078 6.038271 GGTATGTAGTCCGCATTGAAATTTCT 59.962 38.462 18.64 0.00 0.00 2.52
692 1079 6.199393 GGTATGTAGTCCGCATTGAAATTTC 58.801 40.000 11.41 11.41 0.00 2.17
693 1080 5.220777 CGGTATGTAGTCCGCATTGAAATTT 60.221 40.000 0.00 0.00 40.28 1.82
694 1081 4.272504 CGGTATGTAGTCCGCATTGAAATT 59.727 41.667 0.00 0.00 40.28 1.82
695 1082 3.807622 CGGTATGTAGTCCGCATTGAAAT 59.192 43.478 0.00 0.00 40.28 2.17
696 1083 3.119065 TCGGTATGTAGTCCGCATTGAAA 60.119 43.478 0.00 0.00 45.44 2.69
697 1084 2.427812 TCGGTATGTAGTCCGCATTGAA 59.572 45.455 0.00 0.00 45.44 2.69
698 1085 2.025898 TCGGTATGTAGTCCGCATTGA 58.974 47.619 0.00 0.00 45.44 2.57
699 1086 2.502213 TCGGTATGTAGTCCGCATTG 57.498 50.000 0.00 0.00 45.44 2.82
700 1087 2.364324 ACATCGGTATGTAGTCCGCATT 59.636 45.455 0.00 0.00 44.66 3.56
701 1088 1.961394 ACATCGGTATGTAGTCCGCAT 59.039 47.619 0.00 0.00 44.66 4.73
702 1089 1.395635 ACATCGGTATGTAGTCCGCA 58.604 50.000 0.00 0.00 44.66 5.69
714 1101 9.149225 CTCTAAAGTACGTCTATATACATCGGT 57.851 37.037 0.00 0.00 0.00 4.69
715 1102 9.149225 ACTCTAAAGTACGTCTATATACATCGG 57.851 37.037 0.00 0.00 32.59 4.18
716 1103 9.955310 CACTCTAAAGTACGTCTATATACATCG 57.045 37.037 0.00 0.00 33.25 3.84
724 1111 8.737175 TGAATCAACACTCTAAAGTACGTCTAT 58.263 33.333 0.00 0.00 33.25 1.98
725 1112 8.102800 TGAATCAACACTCTAAAGTACGTCTA 57.897 34.615 0.00 0.00 33.25 2.59
726 1113 6.978338 TGAATCAACACTCTAAAGTACGTCT 58.022 36.000 0.00 0.00 33.25 4.18
727 1114 7.813852 ATGAATCAACACTCTAAAGTACGTC 57.186 36.000 0.00 0.00 33.25 4.34
728 1115 7.870954 TGAATGAATCAACACTCTAAAGTACGT 59.129 33.333 0.00 0.00 34.30 3.57
729 1116 8.239681 TGAATGAATCAACACTCTAAAGTACG 57.760 34.615 0.00 0.00 34.30 3.67
734 1121 9.195411 GCAAAATGAATGAATCAACACTCTAAA 57.805 29.630 0.00 0.00 42.54 1.85
735 1122 8.579006 AGCAAAATGAATGAATCAACACTCTAA 58.421 29.630 0.00 0.00 42.54 2.10
736 1123 8.114331 AGCAAAATGAATGAATCAACACTCTA 57.886 30.769 0.00 0.00 42.54 2.43
737 1124 6.989659 AGCAAAATGAATGAATCAACACTCT 58.010 32.000 0.00 0.00 42.54 3.24
738 1125 6.309737 GGAGCAAAATGAATGAATCAACACTC 59.690 38.462 0.00 0.00 42.54 3.51
739 1126 6.161381 GGAGCAAAATGAATGAATCAACACT 58.839 36.000 0.00 0.00 42.54 3.55
740 1127 5.061311 CGGAGCAAAATGAATGAATCAACAC 59.939 40.000 0.00 0.00 42.54 3.32
741 1128 5.162794 CGGAGCAAAATGAATGAATCAACA 58.837 37.500 0.00 0.00 42.54 3.33
742 1129 5.163513 ACGGAGCAAAATGAATGAATCAAC 58.836 37.500 0.00 0.00 42.54 3.18
743 1130 5.389859 ACGGAGCAAAATGAATGAATCAA 57.610 34.783 0.00 0.00 42.54 2.57
744 1131 6.095300 ACATACGGAGCAAAATGAATGAATCA 59.905 34.615 0.00 0.00 43.67 2.57
745 1132 6.498304 ACATACGGAGCAAAATGAATGAATC 58.502 36.000 0.00 0.00 0.00 2.52
746 1133 6.455360 ACATACGGAGCAAAATGAATGAAT 57.545 33.333 0.00 0.00 0.00 2.57
747 1134 5.895636 ACATACGGAGCAAAATGAATGAA 57.104 34.783 0.00 0.00 0.00 2.57
748 1135 6.112734 ACTACATACGGAGCAAAATGAATGA 58.887 36.000 0.00 0.00 0.00 2.57
749 1136 6.363577 ACTACATACGGAGCAAAATGAATG 57.636 37.500 0.00 0.00 0.00 2.67
750 1137 5.527582 GGACTACATACGGAGCAAAATGAAT 59.472 40.000 0.00 0.00 0.00 2.57
751 1138 4.873827 GGACTACATACGGAGCAAAATGAA 59.126 41.667 0.00 0.00 0.00 2.57
752 1139 4.081365 TGGACTACATACGGAGCAAAATGA 60.081 41.667 0.00 0.00 0.00 2.57
753 1140 4.188462 TGGACTACATACGGAGCAAAATG 58.812 43.478 0.00 0.00 0.00 2.32
754 1141 4.481368 TGGACTACATACGGAGCAAAAT 57.519 40.909 0.00 0.00 0.00 1.82
755 1142 3.965379 TGGACTACATACGGAGCAAAA 57.035 42.857 0.00 0.00 0.00 2.44
756 1143 4.891168 TCTATGGACTACATACGGAGCAAA 59.109 41.667 0.00 0.00 41.03 3.68
757 1144 4.466827 TCTATGGACTACATACGGAGCAA 58.533 43.478 0.00 0.00 41.03 3.91
758 1145 4.072839 CTCTATGGACTACATACGGAGCA 58.927 47.826 0.00 0.00 41.03 4.26
759 1146 3.440872 CCTCTATGGACTACATACGGAGC 59.559 52.174 0.00 0.00 41.03 4.70
760 1147 4.907809 TCCTCTATGGACTACATACGGAG 58.092 47.826 0.00 0.00 40.56 4.63
761 1148 4.987963 TCCTCTATGGACTACATACGGA 57.012 45.455 0.00 0.00 40.56 4.69
762 1149 5.477291 ACATTCCTCTATGGACTACATACGG 59.523 44.000 0.00 0.00 46.14 4.02
763 1150 6.431543 AGACATTCCTCTATGGACTACATACG 59.568 42.308 0.00 0.00 46.14 3.06
764 1151 7.768807 AGACATTCCTCTATGGACTACATAC 57.231 40.000 0.00 0.00 46.14 2.39
765 1152 8.891501 TCTAGACATTCCTCTATGGACTACATA 58.108 37.037 0.00 0.00 46.14 2.29
766 1153 7.760607 TCTAGACATTCCTCTATGGACTACAT 58.239 38.462 0.00 0.00 46.14 2.29
767 1154 7.150447 TCTAGACATTCCTCTATGGACTACA 57.850 40.000 0.00 0.00 46.14 2.74
768 1155 8.466617 TTTCTAGACATTCCTCTATGGACTAC 57.533 38.462 0.00 0.00 46.14 2.73
769 1156 8.503573 TCTTTCTAGACATTCCTCTATGGACTA 58.496 37.037 0.00 0.00 46.14 2.59
770 1157 7.358263 TCTTTCTAGACATTCCTCTATGGACT 58.642 38.462 0.00 0.00 46.14 3.85
771 1158 7.589958 TCTTTCTAGACATTCCTCTATGGAC 57.410 40.000 0.00 0.00 46.14 4.02
787 1174 8.917655 GCGCTTCCTAAATATAAGTCTTTCTAG 58.082 37.037 0.00 0.00 0.00 2.43
788 1175 7.594015 CGCGCTTCCTAAATATAAGTCTTTCTA 59.406 37.037 5.56 0.00 0.00 2.10
789 1176 6.421202 CGCGCTTCCTAAATATAAGTCTTTCT 59.579 38.462 5.56 0.00 0.00 2.52
790 1177 6.582264 CGCGCTTCCTAAATATAAGTCTTTC 58.418 40.000 5.56 0.00 0.00 2.62
791 1178 5.050295 GCGCGCTTCCTAAATATAAGTCTTT 60.050 40.000 26.67 0.00 0.00 2.52
792 1179 4.448060 GCGCGCTTCCTAAATATAAGTCTT 59.552 41.667 26.67 0.00 0.00 3.01
793 1180 3.988517 GCGCGCTTCCTAAATATAAGTCT 59.011 43.478 26.67 0.00 0.00 3.24
794 1181 3.739300 TGCGCGCTTCCTAAATATAAGTC 59.261 43.478 33.29 0.00 0.00 3.01
795 1182 3.724374 TGCGCGCTTCCTAAATATAAGT 58.276 40.909 33.29 0.00 0.00 2.24
796 1183 3.987868 TCTGCGCGCTTCCTAAATATAAG 59.012 43.478 33.29 16.02 0.00 1.73
797 1184 3.985008 TCTGCGCGCTTCCTAAATATAA 58.015 40.909 33.29 5.61 0.00 0.98
798 1185 3.653539 TCTGCGCGCTTCCTAAATATA 57.346 42.857 33.29 5.84 0.00 0.86
799 1186 2.526304 TCTGCGCGCTTCCTAAATAT 57.474 45.000 33.29 0.00 0.00 1.28
800 1187 2.404215 GATCTGCGCGCTTCCTAAATA 58.596 47.619 33.29 7.29 0.00 1.40
801 1188 1.221414 GATCTGCGCGCTTCCTAAAT 58.779 50.000 33.29 14.04 0.00 1.40
802 1189 0.810031 GGATCTGCGCGCTTCCTAAA 60.810 55.000 33.29 8.98 0.00 1.85
803 1190 1.227263 GGATCTGCGCGCTTCCTAA 60.227 57.895 33.29 9.83 0.00 2.69
804 1191 2.076622 GAGGATCTGCGCGCTTCCTA 62.077 60.000 34.51 17.20 38.71 2.94
805 1192 3.438017 GAGGATCTGCGCGCTTCCT 62.438 63.158 34.81 34.81 41.29 3.36
806 1193 2.964389 GAGGATCTGCGCGCTTCC 60.964 66.667 33.29 30.65 0.00 3.46
860 1247 4.072131 TCTGACAAGGCACTAATGAAACC 58.928 43.478 0.00 0.00 38.49 3.27
962 1349 3.818961 AGATGCACACAGAACAATTCG 57.181 42.857 0.00 0.00 34.02 3.34
993 1380 2.169978 CTCCTCTGAAGACATGATGCCA 59.830 50.000 0.00 0.00 0.00 4.92
1033 1426 2.961768 CGAAGCCACCGCCAAATT 59.038 55.556 0.00 0.00 34.57 1.82
1245 1650 2.223479 GCGACTTCAGTTTGCTTGGAAA 60.223 45.455 0.00 0.00 0.00 3.13
1290 1699 0.476771 ACGGGAGTCACCAACCAAAT 59.523 50.000 0.00 0.00 40.62 2.32
1306 1715 1.382692 GGAACGGAGGGAGTAGACGG 61.383 65.000 0.00 0.00 0.00 4.79
1314 1723 3.778075 TCATCTATTTTGGAACGGAGGGA 59.222 43.478 0.00 0.00 0.00 4.20
1315 1724 3.877508 GTCATCTATTTTGGAACGGAGGG 59.122 47.826 0.00 0.00 0.00 4.30
1316 1725 4.770795 AGTCATCTATTTTGGAACGGAGG 58.229 43.478 0.00 0.00 0.00 4.30
1317 1726 5.419542 TGAGTCATCTATTTTGGAACGGAG 58.580 41.667 0.00 0.00 0.00 4.63
1318 1727 5.414789 TGAGTCATCTATTTTGGAACGGA 57.585 39.130 0.00 0.00 0.00 4.69
1319 1728 5.643777 AGTTGAGTCATCTATTTTGGAACGG 59.356 40.000 1.70 0.00 0.00 4.44
1320 1729 6.727824 AGTTGAGTCATCTATTTTGGAACG 57.272 37.500 1.70 0.00 0.00 3.95
1321 1730 8.352942 ACAAAGTTGAGTCATCTATTTTGGAAC 58.647 33.333 14.35 0.00 40.00 3.62
1322 1731 8.463930 ACAAAGTTGAGTCATCTATTTTGGAA 57.536 30.769 14.35 0.00 40.00 3.53
1323 1732 8.999431 GTACAAAGTTGAGTCATCTATTTTGGA 58.001 33.333 14.35 6.88 40.00 3.53
1324 1733 9.003658 AGTACAAAGTTGAGTCATCTATTTTGG 57.996 33.333 14.35 0.00 40.00 3.28
1361 1770 9.672086 CGTTCCAAAATAAATGACTCAACTTTA 57.328 29.630 0.00 0.00 0.00 1.85
1362 1771 7.651704 CCGTTCCAAAATAAATGACTCAACTTT 59.348 33.333 0.00 0.00 0.00 2.66
1363 1772 7.013846 TCCGTTCCAAAATAAATGACTCAACTT 59.986 33.333 0.00 0.00 0.00 2.66
1364 1773 6.488683 TCCGTTCCAAAATAAATGACTCAACT 59.511 34.615 0.00 0.00 0.00 3.16
1365 1774 6.674066 TCCGTTCCAAAATAAATGACTCAAC 58.326 36.000 0.00 0.00 0.00 3.18
1366 1775 6.072175 CCTCCGTTCCAAAATAAATGACTCAA 60.072 38.462 0.00 0.00 0.00 3.02
1367 1776 5.414454 CCTCCGTTCCAAAATAAATGACTCA 59.586 40.000 0.00 0.00 0.00 3.41
1368 1777 5.163652 CCCTCCGTTCCAAAATAAATGACTC 60.164 44.000 0.00 0.00 0.00 3.36
1369 1778 4.705023 CCCTCCGTTCCAAAATAAATGACT 59.295 41.667 0.00 0.00 0.00 3.41
1370 1779 4.703093 TCCCTCCGTTCCAAAATAAATGAC 59.297 41.667 0.00 0.00 0.00 3.06
1371 1780 4.924625 TCCCTCCGTTCCAAAATAAATGA 58.075 39.130 0.00 0.00 0.00 2.57
1372 1781 4.705023 ACTCCCTCCGTTCCAAAATAAATG 59.295 41.667 0.00 0.00 0.00 2.32
1373 1782 4.930696 ACTCCCTCCGTTCCAAAATAAAT 58.069 39.130 0.00 0.00 0.00 1.40
1374 1783 4.376225 ACTCCCTCCGTTCCAAAATAAA 57.624 40.909 0.00 0.00 0.00 1.40
1375 1784 4.286549 TGTACTCCCTCCGTTCCAAAATAA 59.713 41.667 0.00 0.00 0.00 1.40
1376 1785 3.839490 TGTACTCCCTCCGTTCCAAAATA 59.161 43.478 0.00 0.00 0.00 1.40
1377 1786 2.640826 TGTACTCCCTCCGTTCCAAAAT 59.359 45.455 0.00 0.00 0.00 1.82
1378 1787 2.048601 TGTACTCCCTCCGTTCCAAAA 58.951 47.619 0.00 0.00 0.00 2.44
1379 1788 1.719529 TGTACTCCCTCCGTTCCAAA 58.280 50.000 0.00 0.00 0.00 3.28
1380 1789 1.719529 TTGTACTCCCTCCGTTCCAA 58.280 50.000 0.00 0.00 0.00 3.53
1381 1790 1.946984 ATTGTACTCCCTCCGTTCCA 58.053 50.000 0.00 0.00 0.00 3.53
1382 1791 3.345508 AAATTGTACTCCCTCCGTTCC 57.654 47.619 0.00 0.00 0.00 3.62
1383 1792 5.727434 TCTAAAATTGTACTCCCTCCGTTC 58.273 41.667 0.00 0.00 0.00 3.95
1384 1793 5.731591 CTCTAAAATTGTACTCCCTCCGTT 58.268 41.667 0.00 0.00 0.00 4.44
1385 1794 4.382793 GCTCTAAAATTGTACTCCCTCCGT 60.383 45.833 0.00 0.00 0.00 4.69
1386 1795 4.120589 GCTCTAAAATTGTACTCCCTCCG 58.879 47.826 0.00 0.00 0.00 4.63
1387 1796 5.119694 CAGCTCTAAAATTGTACTCCCTCC 58.880 45.833 0.00 0.00 0.00 4.30
1388 1797 5.735766 ACAGCTCTAAAATTGTACTCCCTC 58.264 41.667 0.00 0.00 0.00 4.30
1389 1798 5.763876 ACAGCTCTAAAATTGTACTCCCT 57.236 39.130 0.00 0.00 0.00 4.20
1390 1799 6.206829 ACAAACAGCTCTAAAATTGTACTCCC 59.793 38.462 0.00 0.00 29.89 4.30
1391 1800 7.078228 CACAAACAGCTCTAAAATTGTACTCC 58.922 38.462 0.00 0.00 30.48 3.85
1392 1801 7.639945 ACACAAACAGCTCTAAAATTGTACTC 58.360 34.615 0.00 0.00 30.48 2.59
1393 1802 7.518370 CGACACAAACAGCTCTAAAATTGTACT 60.518 37.037 0.00 0.00 30.48 2.73
1394 1803 6.573725 CGACACAAACAGCTCTAAAATTGTAC 59.426 38.462 0.00 0.00 30.48 2.90
1395 1804 6.259167 ACGACACAAACAGCTCTAAAATTGTA 59.741 34.615 0.00 0.00 30.48 2.41
1396 1805 5.065988 ACGACACAAACAGCTCTAAAATTGT 59.934 36.000 0.00 0.00 0.00 2.71
1397 1806 5.396362 CACGACACAAACAGCTCTAAAATTG 59.604 40.000 0.00 0.00 0.00 2.32
1399 1808 4.554723 GCACGACACAAACAGCTCTAAAAT 60.555 41.667 0.00 0.00 0.00 1.82
1423 1832 7.304622 CGACACAAACAATGAAAGTTTTAGTCG 60.305 37.037 19.00 19.00 45.76 4.18
1498 1914 4.019321 CCCAAATCCAGAAGTGAGGAACTA 60.019 45.833 0.00 0.00 41.55 2.24
1534 1950 6.930164 TGCTTGAGTTACATTTTGATGCAAAT 59.070 30.769 0.00 0.00 33.19 2.32
1557 1974 6.749923 AGATTTCTACTCCAATGTCTTTGC 57.250 37.500 0.00 0.00 33.73 3.68
1711 2136 5.178061 TGACATGAACTAACTGAATCGCAT 58.822 37.500 0.00 0.00 0.00 4.73
1904 2337 1.369625 CTTAACTCACACGGGGATGC 58.630 55.000 0.00 0.00 0.00 3.91
2003 2660 1.135315 CAACGAGTATTTCCGGACGGA 60.135 52.381 1.83 9.76 43.52 4.69
2004 2661 1.274596 CAACGAGTATTTCCGGACGG 58.725 55.000 1.83 3.96 0.00 4.79
2006 2663 2.165030 TCTCCAACGAGTATTTCCGGAC 59.835 50.000 1.83 0.00 37.40 4.79
2007 2664 2.449464 TCTCCAACGAGTATTTCCGGA 58.551 47.619 0.00 0.00 37.40 5.14
2008 2665 2.953466 TCTCCAACGAGTATTTCCGG 57.047 50.000 0.00 0.00 37.40 5.14
2009 2666 4.494199 GCATTTCTCCAACGAGTATTTCCG 60.494 45.833 0.00 0.00 37.40 4.30
2010 2667 4.394920 TGCATTTCTCCAACGAGTATTTCC 59.605 41.667 0.00 0.00 37.40 3.13
2011 2668 5.545658 TGCATTTCTCCAACGAGTATTTC 57.454 39.130 0.00 0.00 37.40 2.17
2012 2669 7.624360 TTATGCATTTCTCCAACGAGTATTT 57.376 32.000 3.54 0.00 37.40 1.40
2015 2672 7.441890 TTTTTATGCATTTCTCCAACGAGTA 57.558 32.000 3.54 0.00 37.40 2.59
2016 2673 5.957842 TTTTATGCATTTCTCCAACGAGT 57.042 34.783 3.54 0.00 37.40 4.18
2017 2674 6.254157 CCATTTTTATGCATTTCTCCAACGAG 59.746 38.462 3.54 0.00 37.48 4.18
2019 2676 6.098679 TCCATTTTTATGCATTTCTCCAACG 58.901 36.000 3.54 0.00 0.00 4.10
2021 2678 7.622713 ACATCCATTTTTATGCATTTCTCCAA 58.377 30.769 3.54 0.00 0.00 3.53
2039 3748 8.871125 ACGGATTTTAGTTCTAGATACATCCAT 58.129 33.333 0.00 0.00 0.00 3.41
2048 4120 7.284716 TGCATCTAGACGGATTTTAGTTCTAGA 59.715 37.037 8.64 8.64 38.94 2.43
2052 4124 6.146347 GGATGCATCTAGACGGATTTTAGTTC 59.854 42.308 25.28 0.00 0.00 3.01
2060 4132 1.621992 ACGGATGCATCTAGACGGAT 58.378 50.000 25.28 0.00 0.00 4.18
2061 4133 1.337071 GAACGGATGCATCTAGACGGA 59.663 52.381 25.28 0.00 0.00 4.69
2062 4134 1.603172 GGAACGGATGCATCTAGACGG 60.603 57.143 25.28 7.43 0.00 4.79
2063 4135 1.338337 AGGAACGGATGCATCTAGACG 59.662 52.381 25.28 21.17 0.00 4.18
2064 4136 2.288518 GGAGGAACGGATGCATCTAGAC 60.289 54.545 25.28 16.83 0.00 2.59
2065 4137 1.964223 GGAGGAACGGATGCATCTAGA 59.036 52.381 25.28 0.00 0.00 2.43
2066 4138 1.336332 CGGAGGAACGGATGCATCTAG 60.336 57.143 25.28 20.66 0.00 2.43
2068 4140 1.043116 TCGGAGGAACGGATGCATCT 61.043 55.000 25.28 6.65 0.00 2.90
2069 4141 0.876342 GTCGGAGGAACGGATGCATC 60.876 60.000 18.81 18.81 0.00 3.91
2070 4142 1.144057 GTCGGAGGAACGGATGCAT 59.856 57.895 0.00 0.00 0.00 3.96
2071 4143 1.822114 TTGTCGGAGGAACGGATGCA 61.822 55.000 0.00 0.00 0.00 3.96
2072 4144 1.079405 TTGTCGGAGGAACGGATGC 60.079 57.895 0.00 0.00 0.00 3.91
2073 4145 0.246635 ACTTGTCGGAGGAACGGATG 59.753 55.000 0.00 0.00 0.00 3.51
2074 4146 1.843368 TACTTGTCGGAGGAACGGAT 58.157 50.000 0.00 0.00 0.00 4.18
2075 4147 1.843368 ATACTTGTCGGAGGAACGGA 58.157 50.000 0.00 0.00 0.00 4.69
2076 4148 2.667473 AATACTTGTCGGAGGAACGG 57.333 50.000 0.00 0.00 0.00 4.44
2077 4149 2.597305 CGAAATACTTGTCGGAGGAACG 59.403 50.000 0.00 0.00 33.62 3.95
2085 4157 1.135315 TCCGTCCCGAAATACTTGTCG 60.135 52.381 0.00 0.00 37.01 4.35
2086 4158 2.537401 CTCCGTCCCGAAATACTTGTC 58.463 52.381 0.00 0.00 0.00 3.18
2087 4159 1.206371 CCTCCGTCCCGAAATACTTGT 59.794 52.381 0.00 0.00 0.00 3.16
2088 4160 1.472728 CCCTCCGTCCCGAAATACTTG 60.473 57.143 0.00 0.00 0.00 3.16
2091 4163 0.103755 GTCCCTCCGTCCCGAAATAC 59.896 60.000 0.00 0.00 0.00 1.89
2100 5579 5.479375 TGGATAAATATGTAGTCCCTCCGTC 59.521 44.000 0.00 0.00 0.00 4.79
2171 5836 8.521170 AATAAAGAGGGGCTTAAAACAGATAC 57.479 34.615 0.00 0.00 35.24 2.24
2240 5905 4.443315 GCATATAAATGGCCAAACCTTGCT 60.443 41.667 10.96 0.00 40.22 3.91
2245 5910 3.070015 AGCAGCATATAAATGGCCAAACC 59.930 43.478 10.96 0.00 39.84 3.27
2547 6226 9.562583 TTTCGGAATGTTACATGCTAAAATTAC 57.437 29.630 3.05 0.00 0.00 1.89
2647 6326 1.027357 CAGCAGCCTGAAAACAGTGT 58.973 50.000 0.00 0.00 41.77 3.55
2712 6391 4.442192 CGCTAGCCTCTCCTGTTTTAGATT 60.442 45.833 9.66 0.00 0.00 2.40
2733 6412 2.024176 TCAAGGAGTTATGGAAGCGC 57.976 50.000 0.00 0.00 0.00 5.92
2742 6421 3.616560 GCGTGTTCTGGATCAAGGAGTTA 60.617 47.826 0.00 0.00 0.00 2.24
2757 6436 3.062639 CACAAGTATCCATCAGCGTGTTC 59.937 47.826 0.00 0.00 0.00 3.18
2784 6463 6.809196 GTGACTTTCTCTACGATTGACTTGAT 59.191 38.462 0.00 0.00 0.00 2.57
2812 6491 8.744008 TCAAAATGTTTCAAACACGTTAAGAA 57.256 26.923 4.73 0.00 45.50 2.52
2902 6581 3.198409 ACATGAAGCAGTTCACAGTCA 57.802 42.857 0.00 0.00 45.58 3.41
2966 6645 4.627058 TCTGAAGATGCAGTCGTGTAAAA 58.373 39.130 0.00 0.00 37.20 1.52
2975 6655 2.775890 CACAACCTCTGAAGATGCAGT 58.224 47.619 0.00 0.00 37.20 4.40
3007 6689 1.860950 CCACACGTGAGACACTGAAAG 59.139 52.381 25.01 0.00 42.29 2.62
3035 6717 5.769662 TCTGTGAGCAACAAATACCTCAATT 59.230 36.000 0.00 0.00 38.67 2.32
3103 6786 7.636259 TCAAGAATTTTTAGAAACATTGCCG 57.364 32.000 0.00 0.00 0.00 5.69
3188 6871 1.427819 CGAGGTTGGCGGCAATTAC 59.572 57.895 28.07 19.68 0.00 1.89
3239 6922 6.246420 AGCGAGGATATTGCATCAAAATAC 57.754 37.500 0.00 0.00 41.26 1.89
3318 7001 6.437477 TCCACTATATAGGATTAGCACACCTG 59.563 42.308 14.25 0.00 35.52 4.00
3331 7014 7.416890 GCCTAATAGCACACTCCACTATATAGG 60.417 44.444 14.25 3.41 34.49 2.57
3382 7065 4.142071 TGGCTAAAACTTCAATGTGTTGCA 60.142 37.500 0.00 0.00 35.26 4.08
3392 7075 3.020274 TGCTGTGTTGGCTAAAACTTCA 58.980 40.909 4.61 0.00 0.00 3.02
3418 7101 4.982241 AAGAGGAGTTCAGGTTCATTGA 57.018 40.909 0.00 0.00 0.00 2.57
3427 7110 8.804204 TCTTAAAAGGTAGTAAGAGGAGTTCAG 58.196 37.037 0.00 0.00 32.64 3.02
3428 7111 8.583296 GTCTTAAAAGGTAGTAAGAGGAGTTCA 58.417 37.037 0.00 0.00 37.09 3.18
3439 7122 7.560991 TCACATATCCCGTCTTAAAAGGTAGTA 59.439 37.037 0.00 0.00 0.00 1.82
3440 7123 6.381994 TCACATATCCCGTCTTAAAAGGTAGT 59.618 38.462 0.00 0.00 0.00 2.73
3441 7124 6.812998 TCACATATCCCGTCTTAAAAGGTAG 58.187 40.000 0.00 0.00 0.00 3.18
3495 7179 6.252869 ACAACAACTATAGTTCGCTATCAACG 59.747 38.462 15.35 3.29 40.61 4.10
3521 7205 8.088365 GGCCAACAAACTAAAAGATGACTTATT 58.912 33.333 0.00 0.00 35.05 1.40
3522 7206 7.232534 TGGCCAACAAACTAAAAGATGACTTAT 59.767 33.333 0.61 0.00 35.05 1.73
3523 7207 6.547880 TGGCCAACAAACTAAAAGATGACTTA 59.452 34.615 0.61 0.00 35.05 2.24
3524 7208 5.362430 TGGCCAACAAACTAAAAGATGACTT 59.638 36.000 0.61 0.00 38.05 3.01
3525 7209 4.892934 TGGCCAACAAACTAAAAGATGACT 59.107 37.500 0.61 0.00 0.00 3.41
3526 7210 5.195001 TGGCCAACAAACTAAAAGATGAC 57.805 39.130 0.61 0.00 0.00 3.06
3527 7211 4.261994 GCTGGCCAACAAACTAAAAGATGA 60.262 41.667 7.01 0.00 0.00 2.92
3528 7212 3.989817 GCTGGCCAACAAACTAAAAGATG 59.010 43.478 7.01 0.00 0.00 2.90
3529 7213 3.897505 AGCTGGCCAACAAACTAAAAGAT 59.102 39.130 7.01 0.00 0.00 2.40
3530 7214 3.295973 AGCTGGCCAACAAACTAAAAGA 58.704 40.909 7.01 0.00 0.00 2.52
3531 7215 3.733443 AGCTGGCCAACAAACTAAAAG 57.267 42.857 7.01 0.00 0.00 2.27
3532 7216 3.181470 GGAAGCTGGCCAACAAACTAAAA 60.181 43.478 7.01 0.00 0.00 1.52
3533 7217 2.364002 GGAAGCTGGCCAACAAACTAAA 59.636 45.455 7.01 0.00 0.00 1.85
3534 7218 1.960689 GGAAGCTGGCCAACAAACTAA 59.039 47.619 7.01 0.00 0.00 2.24
3535 7219 1.144913 AGGAAGCTGGCCAACAAACTA 59.855 47.619 7.01 0.00 0.00 2.24
3536 7220 0.106015 AGGAAGCTGGCCAACAAACT 60.106 50.000 7.01 0.00 0.00 2.66
3537 7221 0.032540 CAGGAAGCTGGCCAACAAAC 59.967 55.000 7.01 0.00 0.00 2.93
3538 7222 0.106268 TCAGGAAGCTGGCCAACAAA 60.106 50.000 7.01 0.00 0.00 2.83
3539 7223 0.823356 GTCAGGAAGCTGGCCAACAA 60.823 55.000 7.01 0.00 0.00 2.83
3540 7224 1.228245 GTCAGGAAGCTGGCCAACA 60.228 57.895 7.01 0.00 0.00 3.33
3541 7225 0.324943 TAGTCAGGAAGCTGGCCAAC 59.675 55.000 7.01 0.92 0.00 3.77
3542 7226 1.065199 CATAGTCAGGAAGCTGGCCAA 60.065 52.381 7.01 0.00 0.00 4.52
3543 7227 0.543277 CATAGTCAGGAAGCTGGCCA 59.457 55.000 4.71 4.71 0.00 5.36
3544 7228 0.543749 ACATAGTCAGGAAGCTGGCC 59.456 55.000 0.00 0.00 0.00 5.36
3545 7229 2.012673 CAACATAGTCAGGAAGCTGGC 58.987 52.381 0.00 0.00 0.00 4.85
3546 7230 3.265791 GACAACATAGTCAGGAAGCTGG 58.734 50.000 0.00 0.00 38.40 4.85
3547 7231 3.930336 TGACAACATAGTCAGGAAGCTG 58.070 45.455 0.00 0.00 43.18 4.24
3555 7239 5.853936 ACAAGCTTACTGACAACATAGTCA 58.146 37.500 0.00 0.00 45.64 3.41
3556 7240 7.313646 TCTACAAGCTTACTGACAACATAGTC 58.686 38.462 0.00 0.00 38.99 2.59
3557 7241 7.228314 TCTACAAGCTTACTGACAACATAGT 57.772 36.000 0.00 0.00 0.00 2.12
3558 7242 7.976175 TCATCTACAAGCTTACTGACAACATAG 59.024 37.037 0.00 0.00 0.00 2.23
3559 7243 7.836842 TCATCTACAAGCTTACTGACAACATA 58.163 34.615 0.00 0.00 0.00 2.29
3560 7244 6.701340 TCATCTACAAGCTTACTGACAACAT 58.299 36.000 0.00 0.00 0.00 2.71
3561 7245 6.096673 TCATCTACAAGCTTACTGACAACA 57.903 37.500 0.00 0.00 0.00 3.33
3562 7246 8.879342 ATATCATCTACAAGCTTACTGACAAC 57.121 34.615 0.00 0.00 0.00 3.32
3591 7275 8.458843 GGCTAGCTTTATTAAGATCAAAACACA 58.541 33.333 15.72 0.00 32.92 3.72
3592 7276 8.458843 TGGCTAGCTTTATTAAGATCAAAACAC 58.541 33.333 15.72 0.00 32.92 3.32
3593 7277 8.574251 TGGCTAGCTTTATTAAGATCAAAACA 57.426 30.769 15.72 0.00 32.92 2.83
3594 7278 9.455847 CATGGCTAGCTTTATTAAGATCAAAAC 57.544 33.333 15.72 0.00 32.92 2.43
3595 7279 8.632679 CCATGGCTAGCTTTATTAAGATCAAAA 58.367 33.333 15.72 0.00 32.92 2.44
3596 7280 7.779798 ACCATGGCTAGCTTTATTAAGATCAAA 59.220 33.333 13.04 0.00 32.92 2.69
3597 7281 7.229306 CACCATGGCTAGCTTTATTAAGATCAA 59.771 37.037 13.04 0.00 32.92 2.57
3598 7282 6.712095 CACCATGGCTAGCTTTATTAAGATCA 59.288 38.462 13.04 0.00 32.92 2.92
3599 7283 6.150140 CCACCATGGCTAGCTTTATTAAGATC 59.850 42.308 13.04 0.00 32.92 2.75
3600 7284 6.006449 CCACCATGGCTAGCTTTATTAAGAT 58.994 40.000 13.04 0.00 32.92 2.40
3601 7285 5.376625 CCACCATGGCTAGCTTTATTAAGA 58.623 41.667 13.04 0.00 32.92 2.10
3602 7286 5.695851 CCACCATGGCTAGCTTTATTAAG 57.304 43.478 13.04 0.00 34.36 1.85
3616 7300 0.322997 TTTACGGAAGGCCACCATGG 60.323 55.000 11.19 11.19 41.55 3.66
3617 7301 1.201414 GTTTTACGGAAGGCCACCATG 59.799 52.381 17.12 6.18 0.00 3.66
3618 7302 1.202952 TGTTTTACGGAAGGCCACCAT 60.203 47.619 17.12 6.33 0.00 3.55
3619 7303 0.183014 TGTTTTACGGAAGGCCACCA 59.817 50.000 17.12 0.00 0.00 4.17
3620 7304 1.320507 TTGTTTTACGGAAGGCCACC 58.679 50.000 5.01 7.29 0.00 4.61
3621 7305 4.004982 TCTATTGTTTTACGGAAGGCCAC 58.995 43.478 5.01 0.00 0.00 5.01
3622 7306 4.004982 GTCTATTGTTTTACGGAAGGCCA 58.995 43.478 5.01 0.00 0.00 5.36
3623 7307 3.063045 CGTCTATTGTTTTACGGAAGGCC 59.937 47.826 0.00 0.00 0.00 5.19
3624 7308 4.254745 CGTCTATTGTTTTACGGAAGGC 57.745 45.455 0.00 0.00 0.00 4.35
3630 7314 6.510638 GCTTATTCCCCGTCTATTGTTTTACG 60.511 42.308 0.00 0.00 35.20 3.18
3631 7315 6.316890 TGCTTATTCCCCGTCTATTGTTTTAC 59.683 38.462 0.00 0.00 0.00 2.01
3632 7316 6.416415 TGCTTATTCCCCGTCTATTGTTTTA 58.584 36.000 0.00 0.00 0.00 1.52
3633 7317 5.258051 TGCTTATTCCCCGTCTATTGTTTT 58.742 37.500 0.00 0.00 0.00 2.43
3634 7318 4.850680 TGCTTATTCCCCGTCTATTGTTT 58.149 39.130 0.00 0.00 0.00 2.83
3635 7319 4.497291 TGCTTATTCCCCGTCTATTGTT 57.503 40.909 0.00 0.00 0.00 2.83
3636 7320 4.706842 ATGCTTATTCCCCGTCTATTGT 57.293 40.909 0.00 0.00 0.00 2.71
3637 7321 5.547465 TGTATGCTTATTCCCCGTCTATTG 58.453 41.667 0.00 0.00 0.00 1.90
3638 7322 5.818678 TGTATGCTTATTCCCCGTCTATT 57.181 39.130 0.00 0.00 0.00 1.73
3639 7323 5.338381 CCATGTATGCTTATTCCCCGTCTAT 60.338 44.000 0.00 0.00 0.00 1.98
3640 7324 4.020573 CCATGTATGCTTATTCCCCGTCTA 60.021 45.833 0.00 0.00 0.00 2.59
3641 7325 3.244561 CCATGTATGCTTATTCCCCGTCT 60.245 47.826 0.00 0.00 0.00 4.18
3642 7326 3.074412 CCATGTATGCTTATTCCCCGTC 58.926 50.000 0.00 0.00 0.00 4.79
3643 7327 2.224769 CCCATGTATGCTTATTCCCCGT 60.225 50.000 0.00 0.00 0.00 5.28
3644 7328 2.436417 CCCATGTATGCTTATTCCCCG 58.564 52.381 0.00 0.00 0.00 5.73
3645 7329 2.171003 GCCCATGTATGCTTATTCCCC 58.829 52.381 0.00 0.00 0.00 4.81
3646 7330 2.821969 CAGCCCATGTATGCTTATTCCC 59.178 50.000 0.00 0.00 35.12 3.97
3647 7331 2.229784 GCAGCCCATGTATGCTTATTCC 59.770 50.000 6.74 0.00 35.12 3.01
3648 7332 3.565905 GCAGCCCATGTATGCTTATTC 57.434 47.619 6.74 0.00 35.12 1.75
3654 7338 2.726274 GCAGCAGCCCATGTATGC 59.274 61.111 6.03 6.03 40.29 3.14
3655 7339 1.820906 ACGCAGCAGCCCATGTATG 60.821 57.895 0.00 0.00 37.52 2.39
3656 7340 1.820906 CACGCAGCAGCCCATGTAT 60.821 57.895 0.00 0.00 37.52 2.29
3657 7341 2.436469 CACGCAGCAGCCCATGTA 60.436 61.111 0.00 0.00 37.52 2.29
3668 7352 0.169672 ATAAAAGCAGCAGCACGCAG 59.830 50.000 3.17 0.00 46.13 5.18
3669 7353 0.597568 AATAAAAGCAGCAGCACGCA 59.402 45.000 3.17 0.00 46.13 5.24
3670 7354 1.701704 AAATAAAAGCAGCAGCACGC 58.298 45.000 3.17 0.00 45.49 5.34
3689 7373 9.734620 CTGATAAAGTGTTTTCATCACTCAAAA 57.265 29.630 0.00 0.00 44.03 2.44
3690 7374 7.862372 GCTGATAAAGTGTTTTCATCACTCAAA 59.138 33.333 0.00 0.00 44.03 2.69
3691 7375 7.229306 AGCTGATAAAGTGTTTTCATCACTCAA 59.771 33.333 0.00 0.00 44.03 3.02
3692 7376 6.712095 AGCTGATAAAGTGTTTTCATCACTCA 59.288 34.615 0.00 0.00 44.03 3.41
3693 7377 7.138692 AGCTGATAAAGTGTTTTCATCACTC 57.861 36.000 0.00 0.00 44.03 3.51
3694 7378 7.516198 AAGCTGATAAAGTGTTTTCATCACT 57.484 32.000 0.00 0.00 46.30 3.41
3695 7379 9.677567 TTTAAGCTGATAAAGTGTTTTCATCAC 57.322 29.630 0.00 0.00 36.22 3.06


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.