Multiple sequence alignment - TraesCS5B01G323100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G323100 chr5B 100.000 3746 0 0 1 3746 507803933 507800188 0.000000e+00 6918.0
1 TraesCS5B01G323100 chr5B 97.436 117 3 0 92 208 379309497 379309613 2.280000e-47 200.0
2 TraesCS5B01G323100 chr5B 92.366 131 9 1 85 215 4826549 4826678 6.390000e-43 185.0
3 TraesCS5B01G323100 chr5B 83.217 143 16 6 237 377 524534771 524534907 1.410000e-24 124.0
4 TraesCS5B01G323100 chr6D 91.845 2894 176 26 809 3648 452128120 452125233 0.000000e+00 3982.0
5 TraesCS5B01G323100 chr6D 82.609 299 15 13 518 787 452128503 452128213 2.910000e-56 230.0
6 TraesCS5B01G323100 chr6D 86.486 148 4 3 392 523 452130864 452130717 8.380000e-32 148.0
7 TraesCS5B01G323100 chr6D 92.063 63 5 0 3504 3566 452125295 452125233 5.150000e-14 89.8
8 TraesCS5B01G323100 chr3B 91.021 2762 181 38 819 3533 146982563 146979822 0.000000e+00 3664.0
9 TraesCS5B01G323100 chr3B 91.676 2643 165 23 809 3408 172170408 172173038 0.000000e+00 3611.0
10 TraesCS5B01G323100 chr3B 91.582 2649 171 21 809 3408 172052034 172054679 0.000000e+00 3609.0
11 TraesCS5B01G323100 chr3B 89.645 2733 209 35 854 3526 173007895 173005177 0.000000e+00 3411.0
12 TraesCS5B01G323100 chr3B 90.174 2585 206 16 987 3534 172092433 172095006 0.000000e+00 3323.0
13 TraesCS5B01G323100 chr3B 97.500 120 3 0 92 211 426124203 426124084 4.900000e-49 206.0
14 TraesCS5B01G323100 chr3B 88.119 101 8 4 3435 3534 172054675 172054772 2.360000e-22 117.0
15 TraesCS5B01G323100 chr3B 88.119 101 8 4 3435 3534 172173034 172173131 2.360000e-22 117.0
16 TraesCS5B01G323100 chr1D 91.254 2664 176 18 931 3568 341029943 341027311 0.000000e+00 3576.0
17 TraesCS5B01G323100 chr1D 90.609 2694 201 25 854 3500 465903205 465900517 0.000000e+00 3526.0
18 TraesCS5B01G323100 chr1D 87.293 968 88 13 2618 3581 430228324 430229260 0.000000e+00 1074.0
19 TraesCS5B01G323100 chr1D 94.161 137 6 2 76 211 258350724 258350859 1.360000e-49 207.0
20 TraesCS5B01G323100 chr1D 94.286 70 2 2 3588 3655 341027373 341027304 5.120000e-19 106.0
21 TraesCS5B01G323100 chr1D 93.443 61 2 2 814 872 430113575 430113635 5.150000e-14 89.8
22 TraesCS5B01G323100 chr1B 91.109 2643 192 21 896 3500 642701493 642698856 0.000000e+00 3539.0
23 TraesCS5B01G323100 chr1B 90.916 2664 185 14 931 3568 456714230 456711598 0.000000e+00 3526.0
24 TraesCS5B01G323100 chr1B 100.000 28 0 0 854 881 642701544 642701517 7.000000e-03 52.8
25 TraesCS5B01G323100 chr3D 90.097 2777 195 38 809 3534 120142388 120145135 0.000000e+00 3531.0
26 TraesCS5B01G323100 chr3D 90.327 2657 207 14 819 3428 121268925 121266272 0.000000e+00 3437.0
27 TraesCS5B01G323100 chr3D 90.120 1498 110 8 2070 3534 120132745 120134237 0.000000e+00 1912.0
28 TraesCS5B01G323100 chr3D 96.875 64 2 0 809 872 120124741 120124804 1.420000e-19 108.0
29 TraesCS5B01G323100 chr3A 91.443 2571 190 6 1150 3692 127071266 127073834 0.000000e+00 3502.0
30 TraesCS5B01G323100 chr3A 90.033 2729 206 32 854 3526 127858988 127856270 0.000000e+00 3472.0
31 TraesCS5B01G323100 chr1A 86.286 824 78 22 2747 3568 440712901 440712111 0.000000e+00 863.0
32 TraesCS5B01G323100 chr1A 92.857 70 3 2 3588 3655 440712173 440712104 2.380000e-17 100.0
33 TraesCS5B01G323100 chr2B 97.479 119 3 0 92 210 620604713 620604831 1.760000e-48 204.0
34 TraesCS5B01G323100 chr2B 95.968 124 5 0 85 208 557988072 557987949 6.340000e-48 202.0
35 TraesCS5B01G323100 chr2B 96.610 118 4 0 92 209 789612184 789612067 2.950000e-46 196.0
36 TraesCS5B01G323100 chr6B 92.361 144 8 3 67 209 553269470 553269329 6.340000e-48 202.0
37 TraesCS5B01G323100 chr6B 97.436 117 3 0 92 208 96453990 96453874 2.280000e-47 200.0
38 TraesCS5B01G323100 chr4A 87.273 55 7 0 3692 3746 26877951 26877897 3.120000e-06 63.9
39 TraesCS5B01G323100 chr7D 85.455 55 8 0 3692 3746 630776954 630776900 1.450000e-04 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G323100 chr5B 507800188 507803933 3745 True 6918.00 6918 100.00000 1 3746 1 chr5B.!!$R1 3745
1 TraesCS5B01G323100 chr6D 452125233 452130864 5631 True 1112.45 3982 88.25075 392 3648 4 chr6D.!!$R1 3256
2 TraesCS5B01G323100 chr3B 146979822 146982563 2741 True 3664.00 3664 91.02100 819 3533 1 chr3B.!!$R1 2714
3 TraesCS5B01G323100 chr3B 173005177 173007895 2718 True 3411.00 3411 89.64500 854 3526 1 chr3B.!!$R2 2672
4 TraesCS5B01G323100 chr3B 172092433 172095006 2573 False 3323.00 3323 90.17400 987 3534 1 chr3B.!!$F1 2547
5 TraesCS5B01G323100 chr3B 172170408 172173131 2723 False 1864.00 3611 89.89750 809 3534 2 chr3B.!!$F3 2725
6 TraesCS5B01G323100 chr3B 172052034 172054772 2738 False 1863.00 3609 89.85050 809 3534 2 chr3B.!!$F2 2725
7 TraesCS5B01G323100 chr1D 465900517 465903205 2688 True 3526.00 3526 90.60900 854 3500 1 chr1D.!!$R1 2646
8 TraesCS5B01G323100 chr1D 341027304 341029943 2639 True 1841.00 3576 92.77000 931 3655 2 chr1D.!!$R2 2724
9 TraesCS5B01G323100 chr1D 430228324 430229260 936 False 1074.00 1074 87.29300 2618 3581 1 chr1D.!!$F3 963
10 TraesCS5B01G323100 chr1B 456711598 456714230 2632 True 3526.00 3526 90.91600 931 3568 1 chr1B.!!$R1 2637
11 TraesCS5B01G323100 chr1B 642698856 642701544 2688 True 1795.90 3539 95.55450 854 3500 2 chr1B.!!$R2 2646
12 TraesCS5B01G323100 chr3D 120142388 120145135 2747 False 3531.00 3531 90.09700 809 3534 1 chr3D.!!$F3 2725
13 TraesCS5B01G323100 chr3D 121266272 121268925 2653 True 3437.00 3437 90.32700 819 3428 1 chr3D.!!$R1 2609
14 TraesCS5B01G323100 chr3D 120132745 120134237 1492 False 1912.00 1912 90.12000 2070 3534 1 chr3D.!!$F2 1464
15 TraesCS5B01G323100 chr3A 127071266 127073834 2568 False 3502.00 3502 91.44300 1150 3692 1 chr3A.!!$F1 2542
16 TraesCS5B01G323100 chr3A 127856270 127858988 2718 True 3472.00 3472 90.03300 854 3526 1 chr3A.!!$R1 2672
17 TraesCS5B01G323100 chr1A 440712104 440712901 797 True 481.50 863 89.57150 2747 3655 2 chr1A.!!$R1 908

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
951 3337 0.179100 CGCTCCACATCCAACGAGAT 60.179 55.000 0.0 0.0 0.0 2.75 F
1374 3774 1.201647 CTCTTCGACGCCTACCTCAAA 59.798 52.381 0.0 0.0 0.0 2.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2224 4624 0.401356 TTCTCCCTGATGCACTGCAA 59.599 50.0 8.03 0.0 43.62 4.08 R
3284 5716 0.179018 AGGTGTGGACAGCAACTTCC 60.179 55.0 11.32 0.0 46.03 3.46 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
23 24 4.873746 TCGATATCCTTGAATCTCCCAC 57.126 45.455 0.00 0.00 0.00 4.61
24 25 4.483950 TCGATATCCTTGAATCTCCCACT 58.516 43.478 0.00 0.00 0.00 4.00
25 26 4.281941 TCGATATCCTTGAATCTCCCACTG 59.718 45.833 0.00 0.00 0.00 3.66
26 27 4.039730 CGATATCCTTGAATCTCCCACTGT 59.960 45.833 0.00 0.00 0.00 3.55
27 28 5.243954 CGATATCCTTGAATCTCCCACTGTA 59.756 44.000 0.00 0.00 0.00 2.74
28 29 4.762289 ATCCTTGAATCTCCCACTGTAC 57.238 45.455 0.00 0.00 0.00 2.90
29 30 3.516586 TCCTTGAATCTCCCACTGTACA 58.483 45.455 0.00 0.00 0.00 2.90
30 31 3.260884 TCCTTGAATCTCCCACTGTACAC 59.739 47.826 0.00 0.00 0.00 2.90
31 32 3.600388 CTTGAATCTCCCACTGTACACC 58.400 50.000 0.00 0.00 0.00 4.16
32 33 2.615391 TGAATCTCCCACTGTACACCA 58.385 47.619 0.00 0.00 0.00 4.17
33 34 2.301870 TGAATCTCCCACTGTACACCAC 59.698 50.000 0.00 0.00 0.00 4.16
34 35 2.024176 ATCTCCCACTGTACACCACA 57.976 50.000 0.00 0.00 35.30 4.17
35 36 2.024176 TCTCCCACTGTACACCACAT 57.976 50.000 0.00 0.00 36.29 3.21
36 37 3.178412 TCTCCCACTGTACACCACATA 57.822 47.619 0.00 0.00 36.29 2.29
37 38 3.719871 TCTCCCACTGTACACCACATAT 58.280 45.455 0.00 0.00 36.29 1.78
38 39 3.450817 TCTCCCACTGTACACCACATATG 59.549 47.826 0.00 0.00 36.29 1.78
39 40 3.445987 TCCCACTGTACACCACATATGA 58.554 45.455 10.38 0.00 36.29 2.15
40 41 3.841255 TCCCACTGTACACCACATATGAA 59.159 43.478 10.38 0.00 36.29 2.57
41 42 4.081142 TCCCACTGTACACCACATATGAAG 60.081 45.833 10.38 2.38 36.29 3.02
42 43 4.323485 CCCACTGTACACCACATATGAAGT 60.323 45.833 10.38 3.06 36.29 3.01
43 44 4.870426 CCACTGTACACCACATATGAAGTC 59.130 45.833 10.38 0.00 36.29 3.01
44 45 5.478407 CACTGTACACCACATATGAAGTCA 58.522 41.667 10.38 0.54 36.29 3.41
45 46 6.108687 CACTGTACACCACATATGAAGTCAT 58.891 40.000 10.38 0.00 36.29 3.06
46 47 7.264947 CACTGTACACCACATATGAAGTCATA 58.735 38.462 10.38 3.56 42.38 2.15
47 48 7.763985 CACTGTACACCACATATGAAGTCATAA 59.236 37.037 10.38 0.00 41.60 1.90
48 49 8.486210 ACTGTACACCACATATGAAGTCATAAT 58.514 33.333 10.38 0.00 41.60 1.28
49 50 9.330063 CTGTACACCACATATGAAGTCATAATT 57.670 33.333 10.38 0.00 41.60 1.40
53 54 9.507329 ACACCACATATGAAGTCATAATTATCC 57.493 33.333 10.38 0.00 41.60 2.59
54 55 8.950210 CACCACATATGAAGTCATAATTATCCC 58.050 37.037 10.38 0.00 41.60 3.85
55 56 8.894592 ACCACATATGAAGTCATAATTATCCCT 58.105 33.333 10.38 0.00 41.60 4.20
56 57 9.745018 CCACATATGAAGTCATAATTATCCCTT 57.255 33.333 10.38 0.76 41.60 3.95
68 69 8.999431 TCATAATTATCCCTTTTATTCACGAGC 58.001 33.333 0.00 0.00 0.00 5.03
69 70 9.003658 CATAATTATCCCTTTTATTCACGAGCT 57.996 33.333 0.00 0.00 0.00 4.09
70 71 6.867662 ATTATCCCTTTTATTCACGAGCTG 57.132 37.500 0.00 0.00 0.00 4.24
71 72 2.356135 TCCCTTTTATTCACGAGCTGC 58.644 47.619 0.00 0.00 0.00 5.25
72 73 1.401905 CCCTTTTATTCACGAGCTGCC 59.598 52.381 0.00 0.00 0.00 4.85
73 74 2.359900 CCTTTTATTCACGAGCTGCCT 58.640 47.619 0.00 0.00 0.00 4.75
74 75 2.096496 CCTTTTATTCACGAGCTGCCTG 59.904 50.000 0.00 0.00 0.00 4.85
75 76 2.472695 TTTATTCACGAGCTGCCTGT 57.527 45.000 0.00 0.00 0.00 4.00
76 77 2.472695 TTATTCACGAGCTGCCTGTT 57.527 45.000 0.00 0.00 0.00 3.16
77 78 2.472695 TATTCACGAGCTGCCTGTTT 57.527 45.000 0.00 0.00 0.00 2.83
78 79 1.160137 ATTCACGAGCTGCCTGTTTC 58.840 50.000 0.00 0.00 0.00 2.78
79 80 1.221466 TTCACGAGCTGCCTGTTTCG 61.221 55.000 6.68 6.68 38.88 3.46
80 81 1.956170 CACGAGCTGCCTGTTTCGT 60.956 57.895 7.89 7.89 46.07 3.85
81 82 1.956170 ACGAGCTGCCTGTTTCGTG 60.956 57.895 12.18 0.00 43.78 4.35
82 83 2.558313 GAGCTGCCTGTTTCGTGC 59.442 61.111 0.00 0.00 0.00 5.34
83 84 1.963338 GAGCTGCCTGTTTCGTGCT 60.963 57.895 0.00 0.00 0.00 4.40
84 85 1.510480 GAGCTGCCTGTTTCGTGCTT 61.510 55.000 0.00 0.00 0.00 3.91
85 86 0.250295 AGCTGCCTGTTTCGTGCTTA 60.250 50.000 0.00 0.00 0.00 3.09
86 87 0.591170 GCTGCCTGTTTCGTGCTTAA 59.409 50.000 0.00 0.00 0.00 1.85
87 88 1.663161 GCTGCCTGTTTCGTGCTTAAC 60.663 52.381 0.00 0.00 0.00 2.01
88 89 1.601903 CTGCCTGTTTCGTGCTTAACA 59.398 47.619 0.00 0.00 33.54 2.41
89 90 2.226330 TGCCTGTTTCGTGCTTAACAT 58.774 42.857 0.00 0.00 34.10 2.71
90 91 2.225491 TGCCTGTTTCGTGCTTAACATC 59.775 45.455 0.00 0.00 34.10 3.06
91 92 2.484264 GCCTGTTTCGTGCTTAACATCT 59.516 45.455 0.00 0.00 34.10 2.90
92 93 3.682858 GCCTGTTTCGTGCTTAACATCTA 59.317 43.478 0.00 0.00 34.10 1.98
93 94 4.435651 GCCTGTTTCGTGCTTAACATCTAC 60.436 45.833 0.00 0.00 34.10 2.59
94 95 4.929808 CCTGTTTCGTGCTTAACATCTACT 59.070 41.667 0.00 0.00 34.10 2.57
95 96 5.062308 CCTGTTTCGTGCTTAACATCTACTC 59.938 44.000 0.00 0.00 34.10 2.59
96 97 4.927425 TGTTTCGTGCTTAACATCTACTCC 59.073 41.667 0.00 0.00 29.82 3.85
97 98 3.795623 TCGTGCTTAACATCTACTCCC 57.204 47.619 0.00 0.00 0.00 4.30
98 99 3.362706 TCGTGCTTAACATCTACTCCCT 58.637 45.455 0.00 0.00 0.00 4.20
99 100 3.380637 TCGTGCTTAACATCTACTCCCTC 59.619 47.826 0.00 0.00 0.00 4.30
100 101 3.491104 CGTGCTTAACATCTACTCCCTCC 60.491 52.174 0.00 0.00 0.00 4.30
101 102 2.693591 TGCTTAACATCTACTCCCTCCG 59.306 50.000 0.00 0.00 0.00 4.63
102 103 2.694109 GCTTAACATCTACTCCCTCCGT 59.306 50.000 0.00 0.00 0.00 4.69
103 104 3.243468 GCTTAACATCTACTCCCTCCGTC 60.243 52.174 0.00 0.00 0.00 4.79
104 105 2.830651 AACATCTACTCCCTCCGTCT 57.169 50.000 0.00 0.00 0.00 4.18
105 106 2.060050 ACATCTACTCCCTCCGTCTG 57.940 55.000 0.00 0.00 0.00 3.51
106 107 1.323412 CATCTACTCCCTCCGTCTGG 58.677 60.000 0.00 0.00 0.00 3.86
107 108 1.133761 CATCTACTCCCTCCGTCTGGA 60.134 57.143 0.00 0.00 43.88 3.86
108 109 0.997363 TCTACTCCCTCCGTCTGGAA 59.003 55.000 0.00 0.00 45.87 3.53
109 110 1.356738 TCTACTCCCTCCGTCTGGAAA 59.643 52.381 0.00 0.00 45.87 3.13
110 111 2.024273 TCTACTCCCTCCGTCTGGAAAT 60.024 50.000 0.00 0.00 45.87 2.17
111 112 2.544844 ACTCCCTCCGTCTGGAAATA 57.455 50.000 0.00 0.00 45.87 1.40
112 113 2.108970 ACTCCCTCCGTCTGGAAATAC 58.891 52.381 0.00 0.00 45.87 1.89
113 114 2.292323 ACTCCCTCCGTCTGGAAATACT 60.292 50.000 0.00 0.00 45.87 2.12
114 115 2.766828 CTCCCTCCGTCTGGAAATACTT 59.233 50.000 0.00 0.00 45.87 2.24
115 116 2.500098 TCCCTCCGTCTGGAAATACTTG 59.500 50.000 0.00 0.00 45.87 3.16
116 117 2.236395 CCCTCCGTCTGGAAATACTTGT 59.764 50.000 0.00 0.00 45.87 3.16
117 118 3.522553 CCTCCGTCTGGAAATACTTGTC 58.477 50.000 0.00 0.00 45.87 3.18
118 119 3.179830 CTCCGTCTGGAAATACTTGTCG 58.820 50.000 0.00 0.00 45.87 4.35
119 120 2.094390 TCCGTCTGGAAATACTTGTCGG 60.094 50.000 0.00 0.00 42.85 4.79
120 121 2.094390 CCGTCTGGAAATACTTGTCGGA 60.094 50.000 0.00 0.00 38.03 4.55
121 122 3.179830 CGTCTGGAAATACTTGTCGGAG 58.820 50.000 0.00 0.00 0.00 4.63
122 123 3.119602 CGTCTGGAAATACTTGTCGGAGA 60.120 47.826 0.00 0.00 0.00 3.71
123 124 4.617530 CGTCTGGAAATACTTGTCGGAGAA 60.618 45.833 0.00 0.00 39.69 2.87
124 125 5.235516 GTCTGGAAATACTTGTCGGAGAAA 58.764 41.667 0.00 0.00 39.69 2.52
125 126 5.875359 GTCTGGAAATACTTGTCGGAGAAAT 59.125 40.000 0.00 0.00 39.69 2.17
126 127 5.874810 TCTGGAAATACTTGTCGGAGAAATG 59.125 40.000 0.00 0.00 39.69 2.32
127 128 4.941263 TGGAAATACTTGTCGGAGAAATGG 59.059 41.667 0.00 0.00 39.69 3.16
128 129 5.183228 GGAAATACTTGTCGGAGAAATGGA 58.817 41.667 0.00 0.00 39.69 3.41
129 130 5.823045 GGAAATACTTGTCGGAGAAATGGAT 59.177 40.000 0.00 0.00 39.69 3.41
130 131 6.238484 GGAAATACTTGTCGGAGAAATGGATG 60.238 42.308 0.00 0.00 39.69 3.51
131 132 3.981071 ACTTGTCGGAGAAATGGATGA 57.019 42.857 0.00 0.00 39.69 2.92
132 133 4.286297 ACTTGTCGGAGAAATGGATGAA 57.714 40.909 0.00 0.00 39.69 2.57
133 134 4.651778 ACTTGTCGGAGAAATGGATGAAA 58.348 39.130 0.00 0.00 39.69 2.69
134 135 5.070001 ACTTGTCGGAGAAATGGATGAAAA 58.930 37.500 0.00 0.00 39.69 2.29
135 136 5.711976 ACTTGTCGGAGAAATGGATGAAAAT 59.288 36.000 0.00 0.00 39.69 1.82
136 137 5.565592 TGTCGGAGAAATGGATGAAAATG 57.434 39.130 0.00 0.00 39.69 2.32
137 138 4.398988 TGTCGGAGAAATGGATGAAAATGG 59.601 41.667 0.00 0.00 39.69 3.16
138 139 3.953612 TCGGAGAAATGGATGAAAATGGG 59.046 43.478 0.00 0.00 0.00 4.00
139 140 3.701040 CGGAGAAATGGATGAAAATGGGT 59.299 43.478 0.00 0.00 0.00 4.51
140 141 4.440525 CGGAGAAATGGATGAAAATGGGTG 60.441 45.833 0.00 0.00 0.00 4.61
141 142 4.467438 GGAGAAATGGATGAAAATGGGTGT 59.533 41.667 0.00 0.00 0.00 4.16
142 143 5.656416 GGAGAAATGGATGAAAATGGGTGTA 59.344 40.000 0.00 0.00 0.00 2.90
143 144 6.324770 GGAGAAATGGATGAAAATGGGTGTAT 59.675 38.462 0.00 0.00 0.00 2.29
144 145 7.352079 AGAAATGGATGAAAATGGGTGTATC 57.648 36.000 0.00 0.00 0.00 2.24
145 146 7.128077 AGAAATGGATGAAAATGGGTGTATCT 58.872 34.615 0.00 0.00 0.00 1.98
146 147 8.281531 AGAAATGGATGAAAATGGGTGTATCTA 58.718 33.333 0.00 0.00 0.00 1.98
147 148 8.837099 AAATGGATGAAAATGGGTGTATCTAA 57.163 30.769 0.00 0.00 0.00 2.10
148 149 8.837099 AATGGATGAAAATGGGTGTATCTAAA 57.163 30.769 0.00 0.00 0.00 1.85
149 150 8.837099 ATGGATGAAAATGGGTGTATCTAAAA 57.163 30.769 0.00 0.00 0.00 1.52
150 151 8.062065 TGGATGAAAATGGGTGTATCTAAAAC 57.938 34.615 0.00 0.00 0.00 2.43
151 152 7.893302 TGGATGAAAATGGGTGTATCTAAAACT 59.107 33.333 0.00 0.00 0.00 2.66
152 153 9.403583 GGATGAAAATGGGTGTATCTAAAACTA 57.596 33.333 0.00 0.00 0.00 2.24
158 159 9.869757 AAATGGGTGTATCTAAAACTAAATTGC 57.130 29.630 0.00 0.00 0.00 3.56
159 160 7.079182 TGGGTGTATCTAAAACTAAATTGCG 57.921 36.000 0.00 0.00 0.00 4.85
160 161 6.655848 TGGGTGTATCTAAAACTAAATTGCGT 59.344 34.615 0.00 0.00 0.00 5.24
161 162 7.148373 TGGGTGTATCTAAAACTAAATTGCGTC 60.148 37.037 0.00 0.00 0.00 5.19
162 163 7.065443 GGGTGTATCTAAAACTAAATTGCGTCT 59.935 37.037 0.00 0.00 0.00 4.18
163 164 9.090692 GGTGTATCTAAAACTAAATTGCGTCTA 57.909 33.333 0.00 0.00 0.00 2.59
172 173 7.948278 AACTAAATTGCGTCTAGATACATCC 57.052 36.000 0.00 0.00 0.00 3.51
173 174 7.050970 ACTAAATTGCGTCTAGATACATCCA 57.949 36.000 0.00 0.00 0.00 3.41
174 175 7.671302 ACTAAATTGCGTCTAGATACATCCAT 58.329 34.615 0.00 0.00 0.00 3.41
175 176 8.150945 ACTAAATTGCGTCTAGATACATCCATT 58.849 33.333 0.00 0.00 0.00 3.16
176 177 7.426929 AAATTGCGTCTAGATACATCCATTC 57.573 36.000 0.00 0.00 0.00 2.67
177 178 4.521130 TGCGTCTAGATACATCCATTCC 57.479 45.455 0.00 0.00 0.00 3.01
178 179 4.152647 TGCGTCTAGATACATCCATTCCT 58.847 43.478 0.00 0.00 0.00 3.36
179 180 4.588951 TGCGTCTAGATACATCCATTCCTT 59.411 41.667 0.00 0.00 0.00 3.36
180 181 5.164954 GCGTCTAGATACATCCATTCCTTC 58.835 45.833 0.00 0.00 0.00 3.46
181 182 5.394802 CGTCTAGATACATCCATTCCTTCG 58.605 45.833 0.00 0.00 0.00 3.79
182 183 5.181433 CGTCTAGATACATCCATTCCTTCGA 59.819 44.000 0.00 0.00 0.00 3.71
183 184 6.383415 GTCTAGATACATCCATTCCTTCGAC 58.617 44.000 0.00 0.00 0.00 4.20
184 185 6.016192 GTCTAGATACATCCATTCCTTCGACA 60.016 42.308 0.00 0.00 0.00 4.35
185 186 5.614324 AGATACATCCATTCCTTCGACAA 57.386 39.130 0.00 0.00 0.00 3.18
186 187 5.605534 AGATACATCCATTCCTTCGACAAG 58.394 41.667 0.00 0.00 0.00 3.16
187 188 3.703001 ACATCCATTCCTTCGACAAGT 57.297 42.857 0.00 0.00 0.00 3.16
188 189 4.819105 ACATCCATTCCTTCGACAAGTA 57.181 40.909 0.00 0.00 0.00 2.24
189 190 5.359194 ACATCCATTCCTTCGACAAGTAT 57.641 39.130 0.00 0.00 0.00 2.12
190 191 5.745227 ACATCCATTCCTTCGACAAGTATT 58.255 37.500 0.00 0.00 0.00 1.89
191 192 6.180472 ACATCCATTCCTTCGACAAGTATTT 58.820 36.000 0.00 0.00 0.00 1.40
192 193 6.659242 ACATCCATTCCTTCGACAAGTATTTT 59.341 34.615 0.00 0.00 0.00 1.82
193 194 6.737254 TCCATTCCTTCGACAAGTATTTTC 57.263 37.500 0.00 0.00 0.00 2.29
194 195 5.350365 TCCATTCCTTCGACAAGTATTTTCG 59.650 40.000 0.00 0.00 0.00 3.46
195 196 5.447279 CCATTCCTTCGACAAGTATTTTCGG 60.447 44.000 0.00 0.00 33.50 4.30
196 197 4.524316 TCCTTCGACAAGTATTTTCGGA 57.476 40.909 0.00 0.00 33.50 4.55
197 198 4.240096 TCCTTCGACAAGTATTTTCGGAC 58.760 43.478 0.00 0.00 33.50 4.79
198 199 3.060363 CCTTCGACAAGTATTTTCGGACG 59.940 47.826 0.00 0.00 33.50 4.79
199 200 2.598589 TCGACAAGTATTTTCGGACGG 58.401 47.619 0.00 0.00 33.50 4.79
200 201 2.228582 TCGACAAGTATTTTCGGACGGA 59.771 45.455 0.00 0.00 33.50 4.69
201 202 2.597305 CGACAAGTATTTTCGGACGGAG 59.403 50.000 0.00 0.00 0.00 4.63
202 203 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
203 204 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
204 205 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
205 206 1.755380 AGTATTTTCGGACGGAGGGAG 59.245 52.381 0.00 0.00 0.00 4.30
206 207 1.479730 GTATTTTCGGACGGAGGGAGT 59.520 52.381 0.00 0.00 0.00 3.85
207 208 1.856629 ATTTTCGGACGGAGGGAGTA 58.143 50.000 0.00 0.00 0.00 2.59
208 209 1.856629 TTTTCGGACGGAGGGAGTAT 58.143 50.000 0.00 0.00 0.00 2.12
209 210 1.856629 TTTCGGACGGAGGGAGTATT 58.143 50.000 0.00 0.00 0.00 1.89
210 211 1.856629 TTCGGACGGAGGGAGTATTT 58.143 50.000 0.00 0.00 0.00 1.40
211 212 2.734755 TCGGACGGAGGGAGTATTTA 57.265 50.000 0.00 0.00 0.00 1.40
212 213 2.579873 TCGGACGGAGGGAGTATTTAG 58.420 52.381 0.00 0.00 0.00 1.85
213 214 2.092212 TCGGACGGAGGGAGTATTTAGT 60.092 50.000 0.00 0.00 0.00 2.24
214 215 3.136443 TCGGACGGAGGGAGTATTTAGTA 59.864 47.826 0.00 0.00 0.00 1.82
215 216 4.077822 CGGACGGAGGGAGTATTTAGTAT 58.922 47.826 0.00 0.00 0.00 2.12
216 217 5.013079 TCGGACGGAGGGAGTATTTAGTATA 59.987 44.000 0.00 0.00 0.00 1.47
217 218 5.123027 CGGACGGAGGGAGTATTTAGTATAC 59.877 48.000 0.00 0.00 0.00 1.47
218 219 6.006449 GGACGGAGGGAGTATTTAGTATACA 58.994 44.000 5.50 0.00 0.00 2.29
219 220 6.662663 GGACGGAGGGAGTATTTAGTATACAT 59.337 42.308 5.50 0.00 0.00 2.29
220 221 7.362747 GGACGGAGGGAGTATTTAGTATACATG 60.363 44.444 5.50 0.00 0.00 3.21
221 222 7.236529 ACGGAGGGAGTATTTAGTATACATGA 58.763 38.462 5.50 0.00 0.00 3.07
222 223 7.894364 ACGGAGGGAGTATTTAGTATACATGAT 59.106 37.037 5.50 0.00 0.00 2.45
223 224 8.407064 CGGAGGGAGTATTTAGTATACATGATC 58.593 40.741 5.50 0.00 0.00 2.92
224 225 9.482175 GGAGGGAGTATTTAGTATACATGATCT 57.518 37.037 5.50 0.00 0.00 2.75
227 228 9.877178 GGGAGTATTTAGTATACATGATCTTGG 57.123 37.037 12.76 0.00 0.00 3.61
234 235 8.662781 TTAGTATACATGATCTTGGTTCTTGC 57.337 34.615 12.76 0.00 0.00 4.01
235 236 5.755375 AGTATACATGATCTTGGTTCTTGCG 59.245 40.000 12.76 0.00 0.00 4.85
236 237 1.470098 ACATGATCTTGGTTCTTGCGC 59.530 47.619 12.76 0.00 0.00 6.09
237 238 1.469703 CATGATCTTGGTTCTTGCGCA 59.530 47.619 5.66 5.66 0.00 6.09
238 239 1.603456 TGATCTTGGTTCTTGCGCAA 58.397 45.000 23.48 23.48 0.00 4.85
239 240 1.266718 TGATCTTGGTTCTTGCGCAAC 59.733 47.619 21.02 10.85 0.00 4.17
240 241 1.537202 GATCTTGGTTCTTGCGCAACT 59.463 47.619 21.02 0.00 0.00 3.16
241 242 1.388547 TCTTGGTTCTTGCGCAACTT 58.611 45.000 21.02 0.00 0.00 2.66
242 243 1.333619 TCTTGGTTCTTGCGCAACTTC 59.666 47.619 21.02 11.58 0.00 3.01
243 244 1.065401 CTTGGTTCTTGCGCAACTTCA 59.935 47.619 21.02 12.23 0.00 3.02
244 245 0.662619 TGGTTCTTGCGCAACTTCAG 59.337 50.000 21.02 9.50 0.00 3.02
245 246 0.663153 GGTTCTTGCGCAACTTCAGT 59.337 50.000 21.02 0.00 0.00 3.41
246 247 1.065551 GGTTCTTGCGCAACTTCAGTT 59.934 47.619 21.02 0.00 39.12 3.16
294 295 7.730364 TTGAAAGATACAAGACACTCTTTCC 57.270 36.000 16.81 4.78 46.69 3.13
295 296 7.067496 TGAAAGATACAAGACACTCTTTCCT 57.933 36.000 16.81 0.00 46.69 3.36
296 297 8.190326 TGAAAGATACAAGACACTCTTTCCTA 57.810 34.615 16.81 2.16 46.69 2.94
297 298 8.307483 TGAAAGATACAAGACACTCTTTCCTAG 58.693 37.037 16.81 0.00 46.69 3.02
298 299 6.215495 AGATACAAGACACTCTTTCCTAGC 57.785 41.667 0.00 0.00 33.78 3.42
299 300 3.305398 ACAAGACACTCTTTCCTAGCG 57.695 47.619 0.00 0.00 33.78 4.26
300 301 1.996191 CAAGACACTCTTTCCTAGCGC 59.004 52.381 0.00 0.00 33.78 5.92
301 302 1.257743 AGACACTCTTTCCTAGCGCA 58.742 50.000 11.47 0.00 0.00 6.09
302 303 1.827969 AGACACTCTTTCCTAGCGCAT 59.172 47.619 11.47 0.00 0.00 4.73
303 304 3.024547 AGACACTCTTTCCTAGCGCATA 58.975 45.455 11.47 0.00 0.00 3.14
304 305 3.447586 AGACACTCTTTCCTAGCGCATAA 59.552 43.478 11.47 0.00 0.00 1.90
305 306 4.100189 AGACACTCTTTCCTAGCGCATAAT 59.900 41.667 11.47 0.00 0.00 1.28
306 307 4.770795 ACACTCTTTCCTAGCGCATAATT 58.229 39.130 11.47 0.00 0.00 1.40
307 308 5.186198 ACACTCTTTCCTAGCGCATAATTT 58.814 37.500 11.47 0.00 0.00 1.82
308 309 6.346096 ACACTCTTTCCTAGCGCATAATTTA 58.654 36.000 11.47 0.00 0.00 1.40
309 310 6.480320 ACACTCTTTCCTAGCGCATAATTTAG 59.520 38.462 11.47 0.41 0.00 1.85
310 311 6.701841 CACTCTTTCCTAGCGCATAATTTAGA 59.298 38.462 11.47 3.01 0.00 2.10
311 312 7.386299 CACTCTTTCCTAGCGCATAATTTAGAT 59.614 37.037 11.47 0.00 0.00 1.98
312 313 8.585881 ACTCTTTCCTAGCGCATAATTTAGATA 58.414 33.333 11.47 0.00 0.00 1.98
313 314 8.988064 TCTTTCCTAGCGCATAATTTAGATAG 57.012 34.615 11.47 0.00 0.00 2.08
314 315 8.803235 TCTTTCCTAGCGCATAATTTAGATAGA 58.197 33.333 11.47 2.13 0.00 1.98
315 316 8.988064 TTTCCTAGCGCATAATTTAGATAGAG 57.012 34.615 11.47 0.00 0.00 2.43
316 317 7.704578 TCCTAGCGCATAATTTAGATAGAGT 57.295 36.000 11.47 0.00 0.00 3.24
317 318 8.123639 TCCTAGCGCATAATTTAGATAGAGTT 57.876 34.615 11.47 0.00 0.00 3.01
318 319 9.239551 TCCTAGCGCATAATTTAGATAGAGTTA 57.760 33.333 11.47 0.00 0.00 2.24
319 320 9.856488 CCTAGCGCATAATTTAGATAGAGTTAA 57.144 33.333 11.47 0.00 0.00 2.01
323 324 9.267096 GCGCATAATTTAGATAGAGTTAAATGC 57.733 33.333 0.30 0.00 31.69 3.56
344 345 8.496707 AATGCATTGTCATTTAGAAAAATCCC 57.503 30.769 12.09 0.00 33.18 3.85
345 346 6.405538 TGCATTGTCATTTAGAAAAATCCCC 58.594 36.000 0.00 0.00 32.87 4.81
346 347 5.519927 GCATTGTCATTTAGAAAAATCCCCG 59.480 40.000 0.00 0.00 32.87 5.73
347 348 5.652994 TTGTCATTTAGAAAAATCCCCGG 57.347 39.130 0.00 0.00 32.87 5.73
348 349 3.445805 TGTCATTTAGAAAAATCCCCGGC 59.554 43.478 0.00 0.00 32.87 6.13
349 350 2.685897 TCATTTAGAAAAATCCCCGGCG 59.314 45.455 0.00 0.00 32.87 6.46
350 351 0.812549 TTTAGAAAAATCCCCGGCGC 59.187 50.000 0.00 0.00 0.00 6.53
351 352 1.033202 TTAGAAAAATCCCCGGCGCC 61.033 55.000 19.07 19.07 0.00 6.53
352 353 4.187810 GAAAAATCCCCGGCGCCG 62.188 66.667 41.00 41.00 39.44 6.46
370 371 3.554232 CGAAGCGCGCATATCCAT 58.446 55.556 35.10 7.55 0.00 3.41
371 372 1.417592 CGAAGCGCGCATATCCATC 59.582 57.895 35.10 16.84 0.00 3.51
372 373 1.010935 CGAAGCGCGCATATCCATCT 61.011 55.000 35.10 5.73 0.00 2.90
373 374 1.732405 CGAAGCGCGCATATCCATCTA 60.732 52.381 35.10 0.00 0.00 1.98
374 375 1.923204 GAAGCGCGCATATCCATCTAG 59.077 52.381 35.10 0.00 0.00 2.43
375 376 0.891373 AGCGCGCATATCCATCTAGT 59.109 50.000 35.10 3.94 0.00 2.57
376 377 2.092323 AGCGCGCATATCCATCTAGTA 58.908 47.619 35.10 0.00 0.00 1.82
377 378 2.690497 AGCGCGCATATCCATCTAGTAT 59.310 45.455 35.10 2.61 0.00 2.12
378 379 2.791560 GCGCGCATATCCATCTAGTATG 59.208 50.000 29.10 0.00 0.00 2.39
379 380 2.791560 CGCGCATATCCATCTAGTATGC 59.208 50.000 8.75 10.71 44.39 3.14
380 381 3.489908 CGCGCATATCCATCTAGTATGCT 60.490 47.826 8.75 0.00 45.20 3.79
381 382 4.437239 GCGCATATCCATCTAGTATGCTT 58.563 43.478 16.05 2.53 45.20 3.91
382 383 4.505922 GCGCATATCCATCTAGTATGCTTC 59.494 45.833 16.05 7.64 45.20 3.86
383 384 5.680922 GCGCATATCCATCTAGTATGCTTCT 60.681 44.000 16.05 0.00 45.20 2.85
384 385 6.460261 GCGCATATCCATCTAGTATGCTTCTA 60.460 42.308 16.05 0.00 45.20 2.10
385 386 7.138081 CGCATATCCATCTAGTATGCTTCTAG 58.862 42.308 16.05 0.00 45.20 2.43
386 387 7.201776 CGCATATCCATCTAGTATGCTTCTAGT 60.202 40.741 16.05 0.00 45.20 2.57
387 388 8.134895 GCATATCCATCTAGTATGCTTCTAGTC 58.865 40.741 12.65 0.00 44.43 2.59
388 389 9.407380 CATATCCATCTAGTATGCTTCTAGTCT 57.593 37.037 0.00 0.00 36.99 3.24
389 390 7.938140 ATCCATCTAGTATGCTTCTAGTCTC 57.062 40.000 0.00 0.00 36.99 3.36
390 391 6.842676 TCCATCTAGTATGCTTCTAGTCTCA 58.157 40.000 0.00 0.00 36.99 3.27
427 428 1.526041 GATGATGAGCTAGCGCAACTG 59.474 52.381 25.14 0.00 39.10 3.16
428 429 1.086067 TGATGAGCTAGCGCAACTGC 61.086 55.000 25.14 14.51 39.10 4.40
473 475 0.586256 CTCGTTTGCACACACACACG 60.586 55.000 3.55 0.00 0.00 4.49
516 532 8.607459 AGCTGAATAGTTGATTATTCTCAAACG 58.393 33.333 7.48 0.00 39.61 3.60
555 2791 8.890718 GGTTAATACTACCAAAATCAGACCTTC 58.109 37.037 0.00 0.00 35.67 3.46
579 2815 2.614829 AGCAAAACTGACCACGTACT 57.385 45.000 0.00 0.00 0.00 2.73
595 2831 2.094649 CGTACTTGGACTGGACCTCTTC 60.095 54.545 0.00 0.00 0.00 2.87
605 2841 3.966026 GACCTCTTCGGCGTGGACG 62.966 68.421 6.85 3.36 43.27 4.79
629 2865 1.002087 CCCTAGTTCGCTGGAAAGTGT 59.998 52.381 0.00 0.00 33.05 3.55
630 2866 2.069273 CCTAGTTCGCTGGAAAGTGTG 58.931 52.381 0.00 0.00 33.05 3.82
652 2917 2.664081 CCTCCGGCTGCCTTCTTCT 61.664 63.158 17.92 0.00 0.00 2.85
672 2937 4.953667 TCTACTGCTTCTTGCTGGATATG 58.046 43.478 0.00 0.00 43.66 1.78
673 2938 2.928334 ACTGCTTCTTGCTGGATATGG 58.072 47.619 0.00 0.00 43.66 2.74
679 2944 0.538977 CTTGCTGGATATGGCAGGGG 60.539 60.000 0.00 0.00 39.68 4.79
698 2963 3.840831 CGGAGCAGGTTGAATCTCA 57.159 52.632 0.00 0.00 0.00 3.27
701 2966 1.280421 GGAGCAGGTTGAATCTCAGGT 59.720 52.381 0.00 0.00 0.00 4.00
702 2967 2.626840 GAGCAGGTTGAATCTCAGGTC 58.373 52.381 0.00 0.00 0.00 3.85
703 2968 1.980765 AGCAGGTTGAATCTCAGGTCA 59.019 47.619 0.00 0.00 0.00 4.02
704 2969 2.027377 AGCAGGTTGAATCTCAGGTCAG 60.027 50.000 0.00 0.00 0.00 3.51
705 2970 2.938756 GCAGGTTGAATCTCAGGTCAGG 60.939 54.545 0.00 0.00 0.00 3.86
790 3055 3.498676 GGTATCCGATCAAGCCGAG 57.501 57.895 0.00 0.00 0.00 4.63
794 3059 1.762522 ATCCGATCAAGCCGAGCCAT 61.763 55.000 0.00 0.00 0.00 4.40
795 3060 1.958205 CCGATCAAGCCGAGCCATC 60.958 63.158 0.00 0.00 0.00 3.51
796 3061 1.068753 CGATCAAGCCGAGCCATCT 59.931 57.895 0.00 0.00 0.00 2.90
797 3062 0.943359 CGATCAAGCCGAGCCATCTC 60.943 60.000 0.00 0.00 35.99 2.75
805 3070 3.133946 GAGCCATCTCGGAGGACC 58.866 66.667 4.96 0.00 36.56 4.46
807 3072 1.306141 AGCCATCTCGGAGGACCAA 60.306 57.895 4.96 0.00 36.56 3.67
951 3337 0.179100 CGCTCCACATCCAACGAGAT 60.179 55.000 0.00 0.00 0.00 2.75
954 3340 3.733337 GCTCCACATCCAACGAGATTAT 58.267 45.455 0.00 0.00 0.00 1.28
955 3341 4.558697 CGCTCCACATCCAACGAGATTATA 60.559 45.833 0.00 0.00 0.00 0.98
957 3343 5.934625 GCTCCACATCCAACGAGATTATAAT 59.065 40.000 0.00 0.00 0.00 1.28
962 3350 7.117812 CCACATCCAACGAGATTATAATACACC 59.882 40.741 0.00 0.00 0.00 4.16
999 3396 1.531578 GACCAAAGAGAGTTGAACGCC 59.468 52.381 0.00 0.00 0.00 5.68
1374 3774 1.201647 CTCTTCGACGCCTACCTCAAA 59.798 52.381 0.00 0.00 0.00 2.69
1470 3870 3.054875 TGGAGTTCAAGGTCATGGAGATG 60.055 47.826 0.00 0.00 0.00 2.90
1548 3948 2.066999 GCCGGTCAAGAGGGAGGAT 61.067 63.158 1.90 0.00 0.00 3.24
1977 4377 1.750018 CATGGACGGCATGAAGGCA 60.750 57.895 0.00 0.00 44.47 4.75
2390 4791 2.280524 CGAGGTGCCCAACGTCAA 60.281 61.111 0.00 0.00 42.63 3.18
2416 4817 2.910479 ATATCGGCGGCCTCGACA 60.910 61.111 18.34 9.21 46.65 4.35
2445 4846 1.605058 GGGAGCTGCAAGAGACCGTA 61.605 60.000 7.79 0.00 34.07 4.02
2475 4876 2.427506 GTCGAGCACCCAGAGAAATTT 58.572 47.619 0.00 0.00 0.00 1.82
2624 5050 1.227793 TGCTCACCATGTGCGTGAA 60.228 52.632 5.05 0.00 39.66 3.18
2804 5230 1.475403 AGACGGTCTTCATCATCGGT 58.525 50.000 4.45 0.00 0.00 4.69
2816 5242 1.199615 TCATCGGTGCCACCAATAGA 58.800 50.000 15.45 2.94 38.47 1.98
2950 5376 4.329545 TCCTGTGGCCAAGGACGC 62.330 66.667 24.49 7.13 0.00 5.19
3096 5522 3.874383 TGGAAAAAGACACCATGGAGA 57.126 42.857 21.47 0.00 0.00 3.71
3125 5554 0.032017 GGCAGGAAGAGGAGGAGGTA 60.032 60.000 0.00 0.00 0.00 3.08
3141 5573 2.623889 GAGGTAGCAGAGATTAAGGCGA 59.376 50.000 0.00 0.00 0.00 5.54
3155 5587 0.894184 AGGCGACTCACTTCGAGGAA 60.894 55.000 0.00 0.00 46.98 3.36
3212 5644 0.911769 CCATCAGGAAGTACCAGGCA 59.088 55.000 0.00 0.00 42.04 4.75
3343 5781 5.886474 AGGATGAAGACGATCTGTACAAGTA 59.114 40.000 0.00 0.00 0.00 2.24
3353 5791 9.477484 GACGATCTGTACAAGTAATCCAATAAT 57.523 33.333 0.00 0.00 0.00 1.28
3436 5931 9.692749 GTTTTCTCTCATCGGTCATGTATATTA 57.307 33.333 0.00 0.00 33.66 0.98
3573 6116 3.806316 AAGCGTTAACTGAATTGTCGG 57.194 42.857 3.71 0.00 36.09 4.79
3634 6177 4.673968 TCCTAGACTCTGAAAACTAGCCA 58.326 43.478 0.00 0.00 33.31 4.75
3649 6192 4.131596 ACTAGCCAAAGCGTTAACTGAAA 58.868 39.130 3.71 0.00 46.67 2.69
3663 6206 8.823818 GCGTTAACTGAAATAATAAGCTCCTTA 58.176 33.333 3.71 0.00 0.00 2.69
3692 6236 9.820229 GAGATTGTACTATTATCGTTCTCTGAG 57.180 37.037 0.00 0.00 0.00 3.35
3693 6237 8.788806 AGATTGTACTATTATCGTTCTCTGAGG 58.211 37.037 4.59 0.00 0.00 3.86
3694 6238 6.315091 TGTACTATTATCGTTCTCTGAGGC 57.685 41.667 4.59 0.00 0.00 4.70
3695 6239 4.857509 ACTATTATCGTTCTCTGAGGCC 57.142 45.455 4.59 0.00 0.00 5.19
3696 6240 4.215908 ACTATTATCGTTCTCTGAGGCCA 58.784 43.478 5.01 0.00 0.00 5.36
3697 6241 4.649674 ACTATTATCGTTCTCTGAGGCCAA 59.350 41.667 5.01 0.00 0.00 4.52
3698 6242 2.961526 TATCGTTCTCTGAGGCCAAC 57.038 50.000 5.01 0.00 0.00 3.77
3699 6243 1.270907 ATCGTTCTCTGAGGCCAACT 58.729 50.000 5.01 0.00 0.00 3.16
3700 6244 0.603569 TCGTTCTCTGAGGCCAACTC 59.396 55.000 5.01 0.00 46.78 3.01
3701 6245 0.390472 CGTTCTCTGAGGCCAACTCC 60.390 60.000 5.01 0.00 46.01 3.85
3702 6246 0.687354 GTTCTCTGAGGCCAACTCCA 59.313 55.000 5.01 0.00 46.01 3.86
3703 6247 1.072331 GTTCTCTGAGGCCAACTCCAA 59.928 52.381 5.01 0.00 46.01 3.53
3704 6248 0.687354 TCTCTGAGGCCAACTCCAAC 59.313 55.000 5.01 0.00 46.01 3.77
3705 6249 0.671781 CTCTGAGGCCAACTCCAACG 60.672 60.000 5.01 0.00 46.01 4.10
3706 6250 2.281484 TGAGGCCAACTCCAACGC 60.281 61.111 5.01 0.00 46.01 4.84
3707 6251 3.423154 GAGGCCAACTCCAACGCG 61.423 66.667 5.01 3.53 40.49 6.01
3711 6255 4.072088 CCAACTCCAACGCGCGAC 62.072 66.667 39.36 0.00 0.00 5.19
3712 6256 4.072088 CAACTCCAACGCGCGACC 62.072 66.667 39.36 0.00 0.00 4.79
3719 6263 4.814294 AACGCGCGACCCATCCTC 62.814 66.667 39.36 0.00 0.00 3.71
3721 6265 4.933064 CGCGCGACCCATCCTCTC 62.933 72.222 28.94 0.00 0.00 3.20
3722 6266 4.593864 GCGCGACCCATCCTCTCC 62.594 72.222 12.10 0.00 0.00 3.71
3723 6267 2.835431 CGCGACCCATCCTCTCCT 60.835 66.667 0.00 0.00 0.00 3.69
3724 6268 2.427245 CGCGACCCATCCTCTCCTT 61.427 63.158 0.00 0.00 0.00 3.36
3725 6269 1.908483 GCGACCCATCCTCTCCTTT 59.092 57.895 0.00 0.00 0.00 3.11
3726 6270 0.179070 GCGACCCATCCTCTCCTTTC 60.179 60.000 0.00 0.00 0.00 2.62
3727 6271 1.195115 CGACCCATCCTCTCCTTTCA 58.805 55.000 0.00 0.00 0.00 2.69
3728 6272 1.765314 CGACCCATCCTCTCCTTTCAT 59.235 52.381 0.00 0.00 0.00 2.57
3729 6273 2.484417 CGACCCATCCTCTCCTTTCATG 60.484 54.545 0.00 0.00 0.00 3.07
3730 6274 2.507471 GACCCATCCTCTCCTTTCATGT 59.493 50.000 0.00 0.00 0.00 3.21
3731 6275 2.507471 ACCCATCCTCTCCTTTCATGTC 59.493 50.000 0.00 0.00 0.00 3.06
3732 6276 2.158696 CCCATCCTCTCCTTTCATGTCC 60.159 54.545 0.00 0.00 0.00 4.02
3733 6277 2.484417 CCATCCTCTCCTTTCATGTCCG 60.484 54.545 0.00 0.00 0.00 4.79
3734 6278 1.938585 TCCTCTCCTTTCATGTCCGT 58.061 50.000 0.00 0.00 0.00 4.69
3735 6279 2.257207 TCCTCTCCTTTCATGTCCGTT 58.743 47.619 0.00 0.00 0.00 4.44
3736 6280 2.637872 TCCTCTCCTTTCATGTCCGTTT 59.362 45.455 0.00 0.00 0.00 3.60
3737 6281 2.744202 CCTCTCCTTTCATGTCCGTTTG 59.256 50.000 0.00 0.00 0.00 2.93
3738 6282 2.744202 CTCTCCTTTCATGTCCGTTTGG 59.256 50.000 0.00 0.00 0.00 3.28
3739 6283 1.812571 CTCCTTTCATGTCCGTTTGGG 59.187 52.381 0.00 0.00 35.24 4.12
3740 6284 0.243636 CCTTTCATGTCCGTTTGGGC 59.756 55.000 0.00 0.00 41.64 5.36
3741 6285 1.247567 CTTTCATGTCCGTTTGGGCT 58.752 50.000 0.00 0.00 41.88 5.19
3742 6286 2.432444 CTTTCATGTCCGTTTGGGCTA 58.568 47.619 0.00 0.00 41.88 3.93
3743 6287 2.570415 TTCATGTCCGTTTGGGCTAA 57.430 45.000 0.00 0.00 41.88 3.09
3744 6288 2.570415 TCATGTCCGTTTGGGCTAAA 57.430 45.000 0.00 0.00 41.88 1.85
3745 6289 2.865079 TCATGTCCGTTTGGGCTAAAA 58.135 42.857 0.00 0.00 41.88 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
1 2 5.046735 CAGTGGGAGATTCAAGGATATCGAT 60.047 44.000 2.16 2.16 0.00 3.59
2 3 4.281941 CAGTGGGAGATTCAAGGATATCGA 59.718 45.833 0.00 0.00 0.00 3.59
4 5 5.559148 ACAGTGGGAGATTCAAGGATATC 57.441 43.478 0.00 0.00 0.00 1.63
5 6 5.905331 TGTACAGTGGGAGATTCAAGGATAT 59.095 40.000 0.00 0.00 0.00 1.63
6 7 5.128827 GTGTACAGTGGGAGATTCAAGGATA 59.871 44.000 0.00 0.00 0.00 2.59
7 8 4.080863 GTGTACAGTGGGAGATTCAAGGAT 60.081 45.833 0.00 0.00 0.00 3.24
8 9 3.260884 GTGTACAGTGGGAGATTCAAGGA 59.739 47.826 0.00 0.00 0.00 3.36
9 10 3.600388 GTGTACAGTGGGAGATTCAAGG 58.400 50.000 0.00 0.00 0.00 3.61
10 11 3.007940 TGGTGTACAGTGGGAGATTCAAG 59.992 47.826 0.00 0.00 0.00 3.02
11 12 2.976185 TGGTGTACAGTGGGAGATTCAA 59.024 45.455 0.00 0.00 0.00 2.69
12 13 2.301870 GTGGTGTACAGTGGGAGATTCA 59.698 50.000 0.00 0.00 0.00 2.57
13 14 2.301870 TGTGGTGTACAGTGGGAGATTC 59.698 50.000 0.00 0.00 33.42 2.52
14 15 2.334977 TGTGGTGTACAGTGGGAGATT 58.665 47.619 0.00 0.00 33.42 2.40
15 16 2.024176 TGTGGTGTACAGTGGGAGAT 57.976 50.000 0.00 0.00 33.42 2.75
16 17 2.024176 ATGTGGTGTACAGTGGGAGA 57.976 50.000 0.00 0.00 43.80 3.71
17 18 3.450817 TCATATGTGGTGTACAGTGGGAG 59.549 47.826 0.00 0.00 43.80 4.30
18 19 3.445987 TCATATGTGGTGTACAGTGGGA 58.554 45.455 0.00 0.00 43.80 4.37
19 20 3.904800 TCATATGTGGTGTACAGTGGG 57.095 47.619 0.00 0.00 43.80 4.61
20 21 4.832248 ACTTCATATGTGGTGTACAGTGG 58.168 43.478 0.00 0.00 43.80 4.00
21 22 5.478407 TGACTTCATATGTGGTGTACAGTG 58.522 41.667 0.00 0.00 43.80 3.66
22 23 5.738619 TGACTTCATATGTGGTGTACAGT 57.261 39.130 0.00 0.00 43.80 3.55
23 24 8.893219 ATTATGACTTCATATGTGGTGTACAG 57.107 34.615 0.00 0.00 39.05 2.74
27 28 9.507329 GGATAATTATGACTTCATATGTGGTGT 57.493 33.333 1.78 0.00 38.49 4.16
28 29 8.950210 GGGATAATTATGACTTCATATGTGGTG 58.050 37.037 1.78 0.00 38.49 4.17
29 30 8.894592 AGGGATAATTATGACTTCATATGTGGT 58.105 33.333 1.78 2.98 38.49 4.16
30 31 9.745018 AAGGGATAATTATGACTTCATATGTGG 57.255 33.333 1.78 0.00 38.49 4.17
42 43 8.999431 GCTCGTGAATAAAAGGGATAATTATGA 58.001 33.333 1.78 0.00 0.00 2.15
43 44 9.003658 AGCTCGTGAATAAAAGGGATAATTATG 57.996 33.333 1.78 0.00 0.00 1.90
44 45 9.003658 CAGCTCGTGAATAAAAGGGATAATTAT 57.996 33.333 0.00 0.00 0.00 1.28
45 46 7.041372 GCAGCTCGTGAATAAAAGGGATAATTA 60.041 37.037 0.00 0.00 0.00 1.40
46 47 6.238759 GCAGCTCGTGAATAAAAGGGATAATT 60.239 38.462 0.00 0.00 0.00 1.40
47 48 5.239525 GCAGCTCGTGAATAAAAGGGATAAT 59.760 40.000 0.00 0.00 0.00 1.28
48 49 4.574828 GCAGCTCGTGAATAAAAGGGATAA 59.425 41.667 0.00 0.00 0.00 1.75
49 50 4.127171 GCAGCTCGTGAATAAAAGGGATA 58.873 43.478 0.00 0.00 0.00 2.59
50 51 2.945668 GCAGCTCGTGAATAAAAGGGAT 59.054 45.455 0.00 0.00 0.00 3.85
51 52 2.356135 GCAGCTCGTGAATAAAAGGGA 58.644 47.619 0.00 0.00 0.00 4.20
52 53 1.401905 GGCAGCTCGTGAATAAAAGGG 59.598 52.381 0.00 0.00 0.00 3.95
53 54 2.096496 CAGGCAGCTCGTGAATAAAAGG 59.904 50.000 0.00 0.00 32.56 3.11
54 55 2.744202 ACAGGCAGCTCGTGAATAAAAG 59.256 45.455 11.20 0.00 34.80 2.27
55 56 2.778299 ACAGGCAGCTCGTGAATAAAA 58.222 42.857 11.20 0.00 34.80 1.52
56 57 2.472695 ACAGGCAGCTCGTGAATAAA 57.527 45.000 11.20 0.00 34.80 1.40
57 58 2.472695 AACAGGCAGCTCGTGAATAA 57.527 45.000 11.20 0.00 34.80 1.40
58 59 2.346803 GAAACAGGCAGCTCGTGAATA 58.653 47.619 11.20 0.00 34.80 1.75
59 60 1.160137 GAAACAGGCAGCTCGTGAAT 58.840 50.000 11.20 2.24 34.80 2.57
60 61 1.221466 CGAAACAGGCAGCTCGTGAA 61.221 55.000 11.20 0.00 34.80 3.18
61 62 1.664649 CGAAACAGGCAGCTCGTGA 60.665 57.895 11.20 0.00 34.80 4.35
62 63 1.956170 ACGAAACAGGCAGCTCGTG 60.956 57.895 5.89 0.00 42.54 4.35
63 64 1.956170 CACGAAACAGGCAGCTCGT 60.956 57.895 1.00 1.00 44.85 4.18
64 65 2.856032 CACGAAACAGGCAGCTCG 59.144 61.111 0.00 0.00 37.33 5.03
65 66 1.510480 AAGCACGAAACAGGCAGCTC 61.510 55.000 0.00 0.00 0.00 4.09
66 67 0.250295 TAAGCACGAAACAGGCAGCT 60.250 50.000 0.00 0.00 0.00 4.24
67 68 0.591170 TTAAGCACGAAACAGGCAGC 59.409 50.000 0.00 0.00 0.00 5.25
68 69 1.601903 TGTTAAGCACGAAACAGGCAG 59.398 47.619 0.00 0.00 32.11 4.85
69 70 1.669604 TGTTAAGCACGAAACAGGCA 58.330 45.000 0.00 0.00 32.11 4.75
70 71 2.484264 AGATGTTAAGCACGAAACAGGC 59.516 45.455 0.00 0.00 38.87 4.85
71 72 4.929808 AGTAGATGTTAAGCACGAAACAGG 59.070 41.667 0.00 0.00 38.87 4.00
72 73 5.062308 GGAGTAGATGTTAAGCACGAAACAG 59.938 44.000 0.00 0.00 38.87 3.16
73 74 4.927425 GGAGTAGATGTTAAGCACGAAACA 59.073 41.667 0.00 0.00 39.73 2.83
74 75 4.329256 GGGAGTAGATGTTAAGCACGAAAC 59.671 45.833 0.00 0.00 0.00 2.78
75 76 4.222145 AGGGAGTAGATGTTAAGCACGAAA 59.778 41.667 0.00 0.00 0.00 3.46
76 77 3.767673 AGGGAGTAGATGTTAAGCACGAA 59.232 43.478 0.00 0.00 0.00 3.85
77 78 3.362706 AGGGAGTAGATGTTAAGCACGA 58.637 45.455 0.00 0.00 0.00 4.35
78 79 3.491104 GGAGGGAGTAGATGTTAAGCACG 60.491 52.174 0.00 0.00 0.00 5.34
79 80 3.491104 CGGAGGGAGTAGATGTTAAGCAC 60.491 52.174 0.00 0.00 0.00 4.40
80 81 2.693591 CGGAGGGAGTAGATGTTAAGCA 59.306 50.000 0.00 0.00 0.00 3.91
81 82 2.694109 ACGGAGGGAGTAGATGTTAAGC 59.306 50.000 0.00 0.00 0.00 3.09
82 83 4.036971 CAGACGGAGGGAGTAGATGTTAAG 59.963 50.000 0.00 0.00 0.00 1.85
83 84 3.952323 CAGACGGAGGGAGTAGATGTTAA 59.048 47.826 0.00 0.00 0.00 2.01
84 85 3.552875 CAGACGGAGGGAGTAGATGTTA 58.447 50.000 0.00 0.00 0.00 2.41
85 86 2.379972 CAGACGGAGGGAGTAGATGTT 58.620 52.381 0.00 0.00 0.00 2.71
86 87 1.410365 CCAGACGGAGGGAGTAGATGT 60.410 57.143 0.00 0.00 0.00 3.06
87 88 1.133761 TCCAGACGGAGGGAGTAGATG 60.134 57.143 0.00 0.00 35.91 2.90
88 89 1.223501 TCCAGACGGAGGGAGTAGAT 58.776 55.000 0.00 0.00 35.91 1.98
89 90 0.997363 TTCCAGACGGAGGGAGTAGA 59.003 55.000 0.00 0.00 44.10 2.59
90 91 1.848652 TTTCCAGACGGAGGGAGTAG 58.151 55.000 0.00 0.00 44.10 2.57
91 92 2.544844 ATTTCCAGACGGAGGGAGTA 57.455 50.000 0.00 0.00 44.10 2.59
92 93 2.108970 GTATTTCCAGACGGAGGGAGT 58.891 52.381 0.00 0.00 44.10 3.85
93 94 2.389715 AGTATTTCCAGACGGAGGGAG 58.610 52.381 0.00 0.00 44.10 4.30
94 95 2.500098 CAAGTATTTCCAGACGGAGGGA 59.500 50.000 0.00 0.00 44.10 4.20
95 96 2.236395 ACAAGTATTTCCAGACGGAGGG 59.764 50.000 0.00 0.00 44.10 4.30
96 97 3.522553 GACAAGTATTTCCAGACGGAGG 58.477 50.000 0.00 0.00 44.10 4.30
97 98 3.179830 CGACAAGTATTTCCAGACGGAG 58.820 50.000 0.00 0.00 44.10 4.63
98 99 2.094390 CCGACAAGTATTTCCAGACGGA 60.094 50.000 0.00 0.00 40.16 4.69
99 100 2.094390 TCCGACAAGTATTTCCAGACGG 60.094 50.000 0.00 0.00 39.30 4.79
100 101 3.119602 TCTCCGACAAGTATTTCCAGACG 60.120 47.826 0.00 0.00 0.00 4.18
101 102 4.451629 TCTCCGACAAGTATTTCCAGAC 57.548 45.455 0.00 0.00 0.00 3.51
102 103 5.477607 TTTCTCCGACAAGTATTTCCAGA 57.522 39.130 0.00 0.00 0.00 3.86
103 104 5.065218 CCATTTCTCCGACAAGTATTTCCAG 59.935 44.000 0.00 0.00 0.00 3.86
104 105 4.941263 CCATTTCTCCGACAAGTATTTCCA 59.059 41.667 0.00 0.00 0.00 3.53
105 106 5.183228 TCCATTTCTCCGACAAGTATTTCC 58.817 41.667 0.00 0.00 0.00 3.13
106 107 6.538742 TCATCCATTTCTCCGACAAGTATTTC 59.461 38.462 0.00 0.00 0.00 2.17
107 108 6.414732 TCATCCATTTCTCCGACAAGTATTT 58.585 36.000 0.00 0.00 0.00 1.40
108 109 5.989477 TCATCCATTTCTCCGACAAGTATT 58.011 37.500 0.00 0.00 0.00 1.89
109 110 5.614324 TCATCCATTTCTCCGACAAGTAT 57.386 39.130 0.00 0.00 0.00 2.12
110 111 5.414789 TTCATCCATTTCTCCGACAAGTA 57.585 39.130 0.00 0.00 0.00 2.24
111 112 3.981071 TCATCCATTTCTCCGACAAGT 57.019 42.857 0.00 0.00 0.00 3.16
112 113 5.627499 TTTTCATCCATTTCTCCGACAAG 57.373 39.130 0.00 0.00 0.00 3.16
113 114 5.105797 CCATTTTCATCCATTTCTCCGACAA 60.106 40.000 0.00 0.00 0.00 3.18
114 115 4.398988 CCATTTTCATCCATTTCTCCGACA 59.601 41.667 0.00 0.00 0.00 4.35
115 116 4.202050 CCCATTTTCATCCATTTCTCCGAC 60.202 45.833 0.00 0.00 0.00 4.79
116 117 3.953612 CCCATTTTCATCCATTTCTCCGA 59.046 43.478 0.00 0.00 0.00 4.55
117 118 3.701040 ACCCATTTTCATCCATTTCTCCG 59.299 43.478 0.00 0.00 0.00 4.63
118 119 4.467438 ACACCCATTTTCATCCATTTCTCC 59.533 41.667 0.00 0.00 0.00 3.71
119 120 5.665916 ACACCCATTTTCATCCATTTCTC 57.334 39.130 0.00 0.00 0.00 2.87
120 121 7.128077 AGATACACCCATTTTCATCCATTTCT 58.872 34.615 0.00 0.00 0.00 2.52
121 122 7.352079 AGATACACCCATTTTCATCCATTTC 57.648 36.000 0.00 0.00 0.00 2.17
122 123 8.837099 TTAGATACACCCATTTTCATCCATTT 57.163 30.769 0.00 0.00 0.00 2.32
123 124 8.837099 TTTAGATACACCCATTTTCATCCATT 57.163 30.769 0.00 0.00 0.00 3.16
124 125 8.695456 GTTTTAGATACACCCATTTTCATCCAT 58.305 33.333 0.00 0.00 0.00 3.41
125 126 7.893302 AGTTTTAGATACACCCATTTTCATCCA 59.107 33.333 0.00 0.00 0.00 3.41
126 127 8.293699 AGTTTTAGATACACCCATTTTCATCC 57.706 34.615 0.00 0.00 0.00 3.51
132 133 9.869757 GCAATTTAGTTTTAGATACACCCATTT 57.130 29.630 0.00 0.00 0.00 2.32
133 134 8.188139 CGCAATTTAGTTTTAGATACACCCATT 58.812 33.333 0.00 0.00 0.00 3.16
134 135 7.338449 ACGCAATTTAGTTTTAGATACACCCAT 59.662 33.333 0.00 0.00 0.00 4.00
135 136 6.655848 ACGCAATTTAGTTTTAGATACACCCA 59.344 34.615 0.00 0.00 0.00 4.51
136 137 7.065443 AGACGCAATTTAGTTTTAGATACACCC 59.935 37.037 0.00 0.00 0.00 4.61
137 138 7.971455 AGACGCAATTTAGTTTTAGATACACC 58.029 34.615 0.00 0.00 0.00 4.16
146 147 8.827677 GGATGTATCTAGACGCAATTTAGTTTT 58.172 33.333 0.00 0.00 0.00 2.43
147 148 7.985184 TGGATGTATCTAGACGCAATTTAGTTT 59.015 33.333 0.00 0.00 0.00 2.66
148 149 7.497595 TGGATGTATCTAGACGCAATTTAGTT 58.502 34.615 0.00 0.00 0.00 2.24
149 150 7.050970 TGGATGTATCTAGACGCAATTTAGT 57.949 36.000 0.00 0.00 0.00 2.24
150 151 8.539770 AATGGATGTATCTAGACGCAATTTAG 57.460 34.615 0.00 0.00 0.00 1.85
151 152 7.602644 GGAATGGATGTATCTAGACGCAATTTA 59.397 37.037 0.00 0.00 0.00 1.40
152 153 6.428159 GGAATGGATGTATCTAGACGCAATTT 59.572 38.462 0.00 0.00 0.00 1.82
153 154 5.934625 GGAATGGATGTATCTAGACGCAATT 59.065 40.000 0.00 0.00 0.00 2.32
154 155 5.247110 AGGAATGGATGTATCTAGACGCAAT 59.753 40.000 0.00 0.00 0.00 3.56
155 156 4.588951 AGGAATGGATGTATCTAGACGCAA 59.411 41.667 0.00 0.00 0.00 4.85
156 157 4.152647 AGGAATGGATGTATCTAGACGCA 58.847 43.478 0.00 0.00 0.00 5.24
157 158 4.792521 AGGAATGGATGTATCTAGACGC 57.207 45.455 0.00 0.00 0.00 5.19
158 159 5.181433 TCGAAGGAATGGATGTATCTAGACG 59.819 44.000 0.00 0.00 0.00 4.18
159 160 6.016192 TGTCGAAGGAATGGATGTATCTAGAC 60.016 42.308 0.00 0.00 0.00 2.59
160 161 6.068670 TGTCGAAGGAATGGATGTATCTAGA 58.931 40.000 0.00 0.00 0.00 2.43
161 162 6.332735 TGTCGAAGGAATGGATGTATCTAG 57.667 41.667 0.00 0.00 0.00 2.43
162 163 6.323996 ACTTGTCGAAGGAATGGATGTATCTA 59.676 38.462 0.00 0.00 32.95 1.98
163 164 5.129485 ACTTGTCGAAGGAATGGATGTATCT 59.871 40.000 0.00 0.00 32.95 1.98
164 165 5.360591 ACTTGTCGAAGGAATGGATGTATC 58.639 41.667 0.00 0.00 32.95 2.24
165 166 5.359194 ACTTGTCGAAGGAATGGATGTAT 57.641 39.130 0.00 0.00 32.95 2.29
166 167 4.819105 ACTTGTCGAAGGAATGGATGTA 57.181 40.909 0.00 0.00 32.95 2.29
167 168 3.703001 ACTTGTCGAAGGAATGGATGT 57.297 42.857 0.00 0.00 32.95 3.06
168 169 6.683974 AAATACTTGTCGAAGGAATGGATG 57.316 37.500 0.00 0.00 32.95 3.51
169 170 6.037172 CGAAAATACTTGTCGAAGGAATGGAT 59.963 38.462 0.00 0.00 36.92 3.41
170 171 5.350365 CGAAAATACTTGTCGAAGGAATGGA 59.650 40.000 0.00 0.00 36.92 3.41
171 172 5.447279 CCGAAAATACTTGTCGAAGGAATGG 60.447 44.000 1.13 0.00 36.92 3.16
172 173 5.350365 TCCGAAAATACTTGTCGAAGGAATG 59.650 40.000 1.13 0.00 36.92 2.67
173 174 5.350640 GTCCGAAAATACTTGTCGAAGGAAT 59.649 40.000 1.13 0.00 36.92 3.01
174 175 4.687483 GTCCGAAAATACTTGTCGAAGGAA 59.313 41.667 1.13 0.00 36.92 3.36
175 176 4.240096 GTCCGAAAATACTTGTCGAAGGA 58.760 43.478 1.13 0.00 36.92 3.36
176 177 3.060363 CGTCCGAAAATACTTGTCGAAGG 59.940 47.826 1.13 0.00 36.92 3.46
177 178 3.060363 CCGTCCGAAAATACTTGTCGAAG 59.940 47.826 1.13 0.00 36.92 3.79
178 179 2.988493 CCGTCCGAAAATACTTGTCGAA 59.012 45.455 1.13 0.00 36.92 3.71
179 180 2.228582 TCCGTCCGAAAATACTTGTCGA 59.771 45.455 1.13 0.00 36.92 4.20
180 181 2.597305 CTCCGTCCGAAAATACTTGTCG 59.403 50.000 0.00 0.00 34.58 4.35
181 182 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
182 183 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
183 184 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
184 185 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
185 186 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
186 187 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
187 188 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
188 189 1.856629 TACTCCCTCCGTCCGAAAAT 58.143 50.000 0.00 0.00 0.00 1.82
189 190 1.856629 ATACTCCCTCCGTCCGAAAA 58.143 50.000 0.00 0.00 0.00 2.29
190 191 1.856629 AATACTCCCTCCGTCCGAAA 58.143 50.000 0.00 0.00 0.00 3.46
191 192 1.856629 AAATACTCCCTCCGTCCGAA 58.143 50.000 0.00 0.00 0.00 4.30
192 193 2.092212 ACTAAATACTCCCTCCGTCCGA 60.092 50.000 0.00 0.00 0.00 4.55
193 194 2.305009 ACTAAATACTCCCTCCGTCCG 58.695 52.381 0.00 0.00 0.00 4.79
194 195 6.006449 TGTATACTAAATACTCCCTCCGTCC 58.994 44.000 4.17 0.00 0.00 4.79
195 196 7.392673 TCATGTATACTAAATACTCCCTCCGTC 59.607 40.741 4.17 0.00 0.00 4.79
196 197 7.236529 TCATGTATACTAAATACTCCCTCCGT 58.763 38.462 4.17 0.00 0.00 4.69
197 198 7.698506 TCATGTATACTAAATACTCCCTCCG 57.301 40.000 4.17 0.00 0.00 4.63
198 199 9.482175 AGATCATGTATACTAAATACTCCCTCC 57.518 37.037 4.17 0.00 0.00 4.30
201 202 9.877178 CCAAGATCATGTATACTAAATACTCCC 57.123 37.037 4.17 0.00 0.00 4.30
208 209 9.109393 GCAAGAACCAAGATCATGTATACTAAA 57.891 33.333 4.17 0.00 0.00 1.85
209 210 7.438160 CGCAAGAACCAAGATCATGTATACTAA 59.562 37.037 4.17 0.00 43.02 2.24
210 211 6.923508 CGCAAGAACCAAGATCATGTATACTA 59.076 38.462 4.17 0.00 43.02 1.82
211 212 5.755375 CGCAAGAACCAAGATCATGTATACT 59.245 40.000 4.17 0.00 43.02 2.12
212 213 5.559035 GCGCAAGAACCAAGATCATGTATAC 60.559 44.000 0.30 0.00 43.02 1.47
213 214 4.511454 GCGCAAGAACCAAGATCATGTATA 59.489 41.667 0.30 0.00 43.02 1.47
214 215 3.313526 GCGCAAGAACCAAGATCATGTAT 59.686 43.478 0.30 0.00 43.02 2.29
215 216 2.677836 GCGCAAGAACCAAGATCATGTA 59.322 45.455 0.30 0.00 43.02 2.29
216 217 1.470098 GCGCAAGAACCAAGATCATGT 59.530 47.619 0.30 0.00 43.02 3.21
217 218 1.469703 TGCGCAAGAACCAAGATCATG 59.530 47.619 8.16 0.00 43.02 3.07
218 219 1.825090 TGCGCAAGAACCAAGATCAT 58.175 45.000 8.16 0.00 43.02 2.45
219 220 1.266718 GTTGCGCAAGAACCAAGATCA 59.733 47.619 25.78 0.00 43.02 2.92
220 221 1.537202 AGTTGCGCAAGAACCAAGATC 59.463 47.619 25.78 7.55 43.02 2.75
221 222 1.609208 AGTTGCGCAAGAACCAAGAT 58.391 45.000 25.78 0.00 43.02 2.40
222 223 1.333619 GAAGTTGCGCAAGAACCAAGA 59.666 47.619 25.78 0.00 43.02 3.02
223 224 1.065401 TGAAGTTGCGCAAGAACCAAG 59.935 47.619 25.78 0.00 43.02 3.61
224 225 1.065401 CTGAAGTTGCGCAAGAACCAA 59.935 47.619 25.78 6.54 43.02 3.67
225 226 0.662619 CTGAAGTTGCGCAAGAACCA 59.337 50.000 25.78 17.18 43.02 3.67
226 227 0.663153 ACTGAAGTTGCGCAAGAACC 59.337 50.000 25.78 12.05 43.02 3.62
227 228 2.475200 AACTGAAGTTGCGCAAGAAC 57.525 45.000 25.78 13.46 36.65 3.01
273 274 7.100409 GCTAGGAAAGAGTGTCTTGTATCTTT 58.900 38.462 0.00 0.00 42.96 2.52
274 275 6.626181 CGCTAGGAAAGAGTGTCTTGTATCTT 60.626 42.308 0.00 0.00 36.71 2.40
275 276 5.163602 CGCTAGGAAAGAGTGTCTTGTATCT 60.164 44.000 0.00 0.00 36.71 1.98
276 277 5.038033 CGCTAGGAAAGAGTGTCTTGTATC 58.962 45.833 0.00 0.00 36.71 2.24
277 278 4.678309 GCGCTAGGAAAGAGTGTCTTGTAT 60.678 45.833 0.00 0.00 36.71 2.29
278 279 3.367087 GCGCTAGGAAAGAGTGTCTTGTA 60.367 47.826 0.00 0.00 36.71 2.41
279 280 2.610727 GCGCTAGGAAAGAGTGTCTTGT 60.611 50.000 0.00 0.00 36.71 3.16
280 281 1.996191 GCGCTAGGAAAGAGTGTCTTG 59.004 52.381 0.00 0.00 36.71 3.02
281 282 1.618837 TGCGCTAGGAAAGAGTGTCTT 59.381 47.619 9.73 0.00 38.59 3.01
282 283 1.257743 TGCGCTAGGAAAGAGTGTCT 58.742 50.000 9.73 0.00 0.00 3.41
283 284 2.301577 ATGCGCTAGGAAAGAGTGTC 57.698 50.000 9.73 0.00 0.00 3.67
284 285 3.887621 TTATGCGCTAGGAAAGAGTGT 57.112 42.857 9.73 0.00 0.00 3.55
285 286 5.741388 AAATTATGCGCTAGGAAAGAGTG 57.259 39.130 9.73 0.00 0.00 3.51
286 287 6.817184 TCTAAATTATGCGCTAGGAAAGAGT 58.183 36.000 9.73 0.00 0.00 3.24
287 288 7.897575 ATCTAAATTATGCGCTAGGAAAGAG 57.102 36.000 9.73 0.00 0.00 2.85
288 289 8.803235 TCTATCTAAATTATGCGCTAGGAAAGA 58.197 33.333 9.73 4.12 0.00 2.52
289 290 8.988064 TCTATCTAAATTATGCGCTAGGAAAG 57.012 34.615 9.73 0.00 0.00 2.62
290 291 8.585881 ACTCTATCTAAATTATGCGCTAGGAAA 58.414 33.333 9.73 0.00 0.00 3.13
291 292 8.123639 ACTCTATCTAAATTATGCGCTAGGAA 57.876 34.615 9.73 0.00 0.00 3.36
292 293 7.704578 ACTCTATCTAAATTATGCGCTAGGA 57.295 36.000 9.73 0.00 0.00 2.94
293 294 9.856488 TTAACTCTATCTAAATTATGCGCTAGG 57.144 33.333 9.73 0.00 0.00 3.02
297 298 9.267096 GCATTTAACTCTATCTAAATTATGCGC 57.733 33.333 0.00 0.00 0.00 6.09
318 319 8.949177 GGGATTTTTCTAAATGACAATGCATTT 58.051 29.630 9.83 15.75 46.79 2.32
319 320 7.553760 GGGGATTTTTCTAAATGACAATGCATT 59.446 33.333 5.99 5.99 40.04 3.56
320 321 7.049754 GGGGATTTTTCTAAATGACAATGCAT 58.950 34.615 0.00 0.00 34.16 3.96
321 322 6.405538 GGGGATTTTTCTAAATGACAATGCA 58.594 36.000 0.00 0.00 34.16 3.96
322 323 5.519927 CGGGGATTTTTCTAAATGACAATGC 59.480 40.000 0.00 0.00 34.16 3.56
323 324 6.042143 CCGGGGATTTTTCTAAATGACAATG 58.958 40.000 0.00 0.00 34.16 2.82
324 325 5.395214 GCCGGGGATTTTTCTAAATGACAAT 60.395 40.000 2.18 0.00 34.16 2.71
325 326 4.081917 GCCGGGGATTTTTCTAAATGACAA 60.082 41.667 2.18 0.00 34.16 3.18
326 327 3.445805 GCCGGGGATTTTTCTAAATGACA 59.554 43.478 2.18 0.00 34.16 3.58
327 328 3.488553 CGCCGGGGATTTTTCTAAATGAC 60.489 47.826 14.46 0.00 34.16 3.06
328 329 2.685897 CGCCGGGGATTTTTCTAAATGA 59.314 45.455 14.46 0.00 34.16 2.57
329 330 2.798145 GCGCCGGGGATTTTTCTAAATG 60.798 50.000 24.68 0.00 34.16 2.32
330 331 1.407618 GCGCCGGGGATTTTTCTAAAT 59.592 47.619 24.68 0.00 36.68 1.40
331 332 0.812549 GCGCCGGGGATTTTTCTAAA 59.187 50.000 24.68 0.00 0.00 1.85
332 333 1.033202 GGCGCCGGGGATTTTTCTAA 61.033 55.000 24.68 0.00 0.00 2.10
333 334 1.452470 GGCGCCGGGGATTTTTCTA 60.452 57.895 24.68 0.00 0.00 2.10
334 335 2.754254 GGCGCCGGGGATTTTTCT 60.754 61.111 24.68 0.00 0.00 2.52
335 336 4.187810 CGGCGCCGGGGATTTTTC 62.188 66.667 40.50 2.49 35.56 2.29
353 354 1.010935 AGATGGATATGCGCGCTTCG 61.011 55.000 33.29 0.00 42.12 3.79
354 355 1.923204 CTAGATGGATATGCGCGCTTC 59.077 52.381 33.29 23.97 0.00 3.86
355 356 1.273606 ACTAGATGGATATGCGCGCTT 59.726 47.619 33.29 28.14 0.00 4.68
356 357 0.891373 ACTAGATGGATATGCGCGCT 59.109 50.000 33.29 19.73 0.00 5.92
357 358 2.561733 TACTAGATGGATATGCGCGC 57.438 50.000 27.26 27.26 0.00 6.86
358 359 2.791560 GCATACTAGATGGATATGCGCG 59.208 50.000 0.00 0.00 41.16 6.86
362 363 9.407380 AGACTAGAAGCATACTAGATGGATATG 57.593 37.037 15.24 0.00 39.48 1.78
363 364 9.627123 GAGACTAGAAGCATACTAGATGGATAT 57.373 37.037 15.24 0.00 39.48 1.63
364 365 8.606830 TGAGACTAGAAGCATACTAGATGGATA 58.393 37.037 15.24 0.00 39.48 2.59
365 366 7.465960 TGAGACTAGAAGCATACTAGATGGAT 58.534 38.462 15.24 0.00 39.48 3.41
366 367 6.842676 TGAGACTAGAAGCATACTAGATGGA 58.157 40.000 15.24 0.00 39.48 3.41
367 368 7.517614 TTGAGACTAGAAGCATACTAGATGG 57.482 40.000 15.24 0.00 39.48 3.51
368 369 8.629158 ACTTTGAGACTAGAAGCATACTAGATG 58.371 37.037 15.24 0.00 39.48 2.90
369 370 8.760980 ACTTTGAGACTAGAAGCATACTAGAT 57.239 34.615 15.24 6.50 39.48 1.98
370 371 9.682465 TTACTTTGAGACTAGAAGCATACTAGA 57.318 33.333 15.24 0.00 39.48 2.43
373 374 9.593134 CATTTACTTTGAGACTAGAAGCATACT 57.407 33.333 0.00 0.00 0.00 2.12
374 375 9.372369 ACATTTACTTTGAGACTAGAAGCATAC 57.628 33.333 0.00 0.00 0.00 2.39
376 377 9.944376 TTACATTTACTTTGAGACTAGAAGCAT 57.056 29.630 0.00 0.00 0.00 3.79
377 378 9.424319 CTTACATTTACTTTGAGACTAGAAGCA 57.576 33.333 0.00 0.00 0.00 3.91
378 379 8.874816 CCTTACATTTACTTTGAGACTAGAAGC 58.125 37.037 0.00 0.00 0.00 3.86
379 380 9.930693 ACCTTACATTTACTTTGAGACTAGAAG 57.069 33.333 0.00 0.00 0.00 2.85
380 381 9.706691 CACCTTACATTTACTTTGAGACTAGAA 57.293 33.333 0.00 0.00 0.00 2.10
381 382 8.311836 CCACCTTACATTTACTTTGAGACTAGA 58.688 37.037 0.00 0.00 0.00 2.43
382 383 8.311836 TCCACCTTACATTTACTTTGAGACTAG 58.688 37.037 0.00 0.00 0.00 2.57
383 384 8.197592 TCCACCTTACATTTACTTTGAGACTA 57.802 34.615 0.00 0.00 0.00 2.59
384 385 7.074653 TCCACCTTACATTTACTTTGAGACT 57.925 36.000 0.00 0.00 0.00 3.24
385 386 7.606456 TCATCCACCTTACATTTACTTTGAGAC 59.394 37.037 0.00 0.00 0.00 3.36
386 387 7.685481 TCATCCACCTTACATTTACTTTGAGA 58.315 34.615 0.00 0.00 0.00 3.27
387 388 7.921786 TCATCCACCTTACATTTACTTTGAG 57.078 36.000 0.00 0.00 0.00 3.02
388 389 8.106462 TCATCATCCACCTTACATTTACTTTGA 58.894 33.333 0.00 0.00 0.00 2.69
389 390 8.279970 TCATCATCCACCTTACATTTACTTTG 57.720 34.615 0.00 0.00 0.00 2.77
390 391 7.067494 GCTCATCATCCACCTTACATTTACTTT 59.933 37.037 0.00 0.00 0.00 2.66
428 429 2.984471 TCGTACGCAAAGTGCTTTCTAG 59.016 45.455 11.24 0.00 42.25 2.43
527 2763 8.557450 AGGTCTGATTTTGGTAGTATTAACCAT 58.443 33.333 0.00 0.00 46.16 3.55
529 2765 8.803397 AAGGTCTGATTTTGGTAGTATTAACC 57.197 34.615 0.00 0.00 37.53 2.85
535 2771 5.570844 GCTGGAAGGTCTGATTTTGGTAGTA 60.571 44.000 0.00 0.00 0.00 1.82
536 2772 4.807643 GCTGGAAGGTCTGATTTTGGTAGT 60.808 45.833 0.00 0.00 0.00 2.73
537 2773 3.691609 GCTGGAAGGTCTGATTTTGGTAG 59.308 47.826 0.00 0.00 0.00 3.18
555 2791 0.031178 GTGGTCAGTTTTGCTGCTGG 59.969 55.000 0.00 0.00 44.66 4.85
571 2807 0.037605 GGTCCAGTCCAAGTACGTGG 60.038 60.000 20.56 20.56 40.33 4.94
572 2808 0.966920 AGGTCCAGTCCAAGTACGTG 59.033 55.000 0.00 1.33 0.00 4.49
579 2815 1.827399 GCCGAAGAGGTCCAGTCCAA 61.827 60.000 0.00 0.00 43.70 3.53
605 2841 2.202756 CCAGCGAACTAGGGCGAC 60.203 66.667 10.20 0.00 0.00 5.19
640 2876 2.006169 GAAGCAGTAGAAGAAGGCAGC 58.994 52.381 0.00 0.00 0.00 5.25
679 2944 0.391661 TGAGATTCAACCTGCTCCGC 60.392 55.000 0.00 0.00 0.00 5.54
686 2951 1.280421 GCCTGACCTGAGATTCAACCT 59.720 52.381 0.00 0.00 0.00 3.50
698 2963 0.615331 ACGATGATGTTGCCTGACCT 59.385 50.000 0.00 0.00 0.00 3.85
701 2966 1.026182 GCCACGATGATGTTGCCTGA 61.026 55.000 0.00 0.00 0.00 3.86
702 2967 1.430632 GCCACGATGATGTTGCCTG 59.569 57.895 0.00 0.00 0.00 4.85
703 2968 2.108514 CGCCACGATGATGTTGCCT 61.109 57.895 0.00 0.00 0.00 4.75
704 2969 2.309764 GACGCCACGATGATGTTGCC 62.310 60.000 0.00 0.00 0.00 4.52
705 2970 1.060937 GACGCCACGATGATGTTGC 59.939 57.895 0.00 0.00 0.00 4.17
789 3054 1.306141 TTGGTCCTCCGAGATGGCT 60.306 57.895 0.00 0.00 37.80 4.75
790 3055 1.144936 CTTGGTCCTCCGAGATGGC 59.855 63.158 0.00 0.00 45.72 4.40
794 3059 1.605451 TTCGCTTGGTCCTCCGAGA 60.605 57.895 5.77 0.00 45.72 4.04
795 3060 1.446272 GTTCGCTTGGTCCTCCGAG 60.446 63.158 0.00 0.00 45.64 4.63
796 3061 2.654877 GTTCGCTTGGTCCTCCGA 59.345 61.111 0.00 0.00 36.30 4.55
797 3062 2.758770 TTCGTTCGCTTGGTCCTCCG 62.759 60.000 0.00 0.00 36.30 4.63
800 3065 0.608640 ATCTTCGTTCGCTTGGTCCT 59.391 50.000 0.00 0.00 0.00 3.85
802 3067 1.656095 CAGATCTTCGTTCGCTTGGTC 59.344 52.381 0.00 0.00 0.00 4.02
804 3069 1.002366 CCAGATCTTCGTTCGCTTGG 58.998 55.000 0.00 0.00 0.00 3.61
805 3070 1.656095 GTCCAGATCTTCGTTCGCTTG 59.344 52.381 0.00 0.00 0.00 4.01
807 3072 1.133407 GAGTCCAGATCTTCGTTCGCT 59.867 52.381 0.00 0.00 0.00 4.93
899 3258 1.101049 GTGTTGTGGTGAGGTGGTGG 61.101 60.000 0.00 0.00 0.00 4.61
900 3259 1.101049 GGTGTTGTGGTGAGGTGGTG 61.101 60.000 0.00 0.00 0.00 4.17
901 3260 1.226262 GGTGTTGTGGTGAGGTGGT 59.774 57.895 0.00 0.00 0.00 4.16
951 3337 4.116961 GCTGCGTCTGTGGTGTATTATAA 58.883 43.478 0.00 0.00 0.00 0.98
954 3340 1.734377 CGCTGCGTCTGTGGTGTATTA 60.734 52.381 14.93 0.00 0.00 0.98
955 3341 1.014044 CGCTGCGTCTGTGGTGTATT 61.014 55.000 14.93 0.00 0.00 1.89
957 3343 2.049526 CGCTGCGTCTGTGGTGTA 60.050 61.111 14.93 0.00 0.00 2.90
962 3350 1.801512 TCGATTCGCTGCGTCTGTG 60.802 57.895 22.48 9.50 0.00 3.66
1107 3507 2.883386 GCCCTTGAATATGGAGAGCTTG 59.117 50.000 0.00 0.00 0.00 4.01
1185 3585 3.680786 CCCTCGCAGGTGTCGTCA 61.681 66.667 2.18 0.00 31.93 4.35
1203 3603 3.693085 CCTTGTTGATCCTCATCTTGTGG 59.307 47.826 0.00 0.00 32.56 4.17
1374 3774 2.643232 GGCGTCCACGAAGTAGGGT 61.643 63.158 2.58 0.00 41.61 4.34
1540 3940 1.235696 GCCTCTCCTCATCCTCCCT 59.764 63.158 0.00 0.00 0.00 4.20
1548 3948 1.745864 GTCGTCGAGCCTCTCCTCA 60.746 63.158 0.00 0.00 0.00 3.86
2224 4624 0.401356 TTCTCCCTGATGCACTGCAA 59.599 50.000 8.03 0.00 43.62 4.08
2390 4791 1.362717 CCGCCGATATCGTTCCAGT 59.637 57.895 22.81 0.00 37.74 4.00
2416 4817 2.977178 CAGCTCCCTCTTGACGCT 59.023 61.111 0.00 0.00 0.00 5.07
2445 4846 2.282674 TGCTCGACCGGGTACTGT 60.283 61.111 6.32 0.00 0.00 3.55
2475 4876 1.014044 GCGACATGCCGAACTTCTCA 61.014 55.000 5.30 0.00 37.76 3.27
2571 4972 0.401356 TGCTGATGAAGTTGGCCTGA 59.599 50.000 3.32 0.00 0.00 3.86
2624 5050 0.598065 GGCGTGCCTTGTCAAAGATT 59.402 50.000 2.98 0.00 35.19 2.40
2804 5230 1.195442 TGTCCGGTCTATTGGTGGCA 61.195 55.000 0.00 0.00 0.00 4.92
2816 5242 1.472728 GCCGAGTCAATTATGTCCGGT 60.473 52.381 0.00 0.00 36.75 5.28
3125 5554 2.103373 TGAGTCGCCTTAATCTCTGCT 58.897 47.619 0.00 0.00 0.00 4.24
3155 5587 0.317938 GCCTCGCGTACTTCATCGAT 60.318 55.000 5.77 0.00 0.00 3.59
3284 5716 0.179018 AGGTGTGGACAGCAACTTCC 60.179 55.000 11.32 0.00 46.03 3.46
3289 5721 1.148273 GTGGAGGTGTGGACAGCAA 59.852 57.895 11.32 0.00 46.03 3.91
3353 5791 7.907389 ACTCCTACTTCATGTTCTAACAATGA 58.093 34.615 0.00 2.52 43.03 2.57
3573 6116 7.971455 AGCTTATTATTTCAGTTCCGTGTAAC 58.029 34.615 0.00 0.00 0.00 2.50
3634 6177 8.182227 GGAGCTTATTATTTCAGTTAACGCTTT 58.818 33.333 0.00 0.00 0.00 3.51
3669 6213 7.371936 GCCTCAGAGAACGATAATAGTACAAT 58.628 38.462 0.00 0.00 0.00 2.71
3678 6222 2.832129 AGTTGGCCTCAGAGAACGATAA 59.168 45.455 3.32 0.00 0.00 1.75
3679 6223 2.427453 GAGTTGGCCTCAGAGAACGATA 59.573 50.000 3.32 0.00 40.17 2.92
3681 6225 0.603569 GAGTTGGCCTCAGAGAACGA 59.396 55.000 3.32 0.00 40.17 3.85
3694 6238 4.072088 GTCGCGCGTTGGAGTTGG 62.072 66.667 30.98 0.00 0.00 3.77
3695 6239 4.072088 GGTCGCGCGTTGGAGTTG 62.072 66.667 30.98 0.00 0.00 3.16
3702 6246 4.814294 GAGGATGGGTCGCGCGTT 62.814 66.667 30.98 10.60 0.00 4.84
3704 6248 4.933064 GAGAGGATGGGTCGCGCG 62.933 72.222 26.76 26.76 0.00 6.86
3705 6249 4.593864 GGAGAGGATGGGTCGCGC 62.594 72.222 0.00 0.00 0.00 6.86
3706 6250 1.961180 AAAGGAGAGGATGGGTCGCG 61.961 60.000 0.00 0.00 0.00 5.87
3707 6251 0.179070 GAAAGGAGAGGATGGGTCGC 60.179 60.000 0.00 0.00 0.00 5.19
3708 6252 1.195115 TGAAAGGAGAGGATGGGTCG 58.805 55.000 0.00 0.00 0.00 4.79
3709 6253 2.507471 ACATGAAAGGAGAGGATGGGTC 59.493 50.000 0.00 0.00 0.00 4.46
3710 6254 2.507471 GACATGAAAGGAGAGGATGGGT 59.493 50.000 0.00 0.00 0.00 4.51
3711 6255 2.158696 GGACATGAAAGGAGAGGATGGG 60.159 54.545 0.00 0.00 0.00 4.00
3712 6256 2.484417 CGGACATGAAAGGAGAGGATGG 60.484 54.545 0.00 0.00 0.00 3.51
3713 6257 2.169352 ACGGACATGAAAGGAGAGGATG 59.831 50.000 0.00 0.00 0.00 3.51
3714 6258 2.472029 ACGGACATGAAAGGAGAGGAT 58.528 47.619 0.00 0.00 0.00 3.24
3715 6259 1.938585 ACGGACATGAAAGGAGAGGA 58.061 50.000 0.00 0.00 0.00 3.71
3716 6260 2.744202 CAAACGGACATGAAAGGAGAGG 59.256 50.000 0.00 0.00 0.00 3.69
3717 6261 2.744202 CCAAACGGACATGAAAGGAGAG 59.256 50.000 0.00 0.00 0.00 3.20
3718 6262 2.552155 CCCAAACGGACATGAAAGGAGA 60.552 50.000 0.00 0.00 0.00 3.71
3719 6263 1.812571 CCCAAACGGACATGAAAGGAG 59.187 52.381 0.00 0.00 0.00 3.69
3720 6264 1.904287 CCCAAACGGACATGAAAGGA 58.096 50.000 0.00 0.00 0.00 3.36
3721 6265 0.243636 GCCCAAACGGACATGAAAGG 59.756 55.000 0.00 0.00 0.00 3.11
3722 6266 1.247567 AGCCCAAACGGACATGAAAG 58.752 50.000 0.00 0.00 0.00 2.62
3723 6267 2.570415 TAGCCCAAACGGACATGAAA 57.430 45.000 0.00 0.00 0.00 2.69
3724 6268 2.570415 TTAGCCCAAACGGACATGAA 57.430 45.000 0.00 0.00 0.00 2.57
3725 6269 2.570415 TTTAGCCCAAACGGACATGA 57.430 45.000 0.00 0.00 0.00 3.07


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.