Multiple sequence alignment - TraesCS5B01G316200

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G316200 chr5B 100.000 3176 0 0 1 3176 498513415 498516590 0.000000e+00 5866
1 TraesCS5B01G316200 chr5B 89.655 2349 154 25 557 2825 708182153 708179814 0.000000e+00 2909
2 TraesCS5B01G316200 chr5B 86.693 511 43 9 1 502 498706777 498707271 7.750000e-151 544
3 TraesCS5B01G316200 chr5B 91.810 232 18 1 557 788 498525328 498525098 3.950000e-84 322
4 TraesCS5B01G316200 chr5B 90.610 213 20 0 569 781 710949457 710949245 1.860000e-72 283
5 TraesCS5B01G316200 chr5B 85.597 243 29 5 557 798 621299421 621299658 1.890000e-62 250
6 TraesCS5B01G316200 chr1D 88.330 2168 120 53 557 2628 828939 831069 0.000000e+00 2479
7 TraesCS5B01G316200 chr1D 91.040 1317 81 17 1531 2825 335413232 335414533 0.000000e+00 1744
8 TraesCS5B01G316200 chr1D 82.353 714 78 26 556 1251 444898364 444899047 7.640000e-161 577
9 TraesCS5B01G316200 chr1D 81.717 722 82 34 557 1252 30073891 30073194 9.950000e-155 556
10 TraesCS5B01G316200 chr1D 80.250 719 87 30 557 1251 335412171 335412858 1.020000e-134 490
11 TraesCS5B01G316200 chr1D 82.026 306 31 10 1250 1534 414450523 414450221 4.090000e-59 239
12 TraesCS5B01G316200 chr6D 88.133 1896 152 26 557 2410 63805765 63807629 0.000000e+00 2187
13 TraesCS5B01G316200 chr6D 80.312 1026 109 41 557 1534 24255702 24256682 0.000000e+00 689
14 TraesCS5B01G316200 chr6D 81.508 703 85 28 567 1251 137510171 137509496 1.300000e-148 536
15 TraesCS5B01G316200 chr6D 80.880 727 84 28 557 1252 438338928 438338226 3.630000e-144 521
16 TraesCS5B01G316200 chr6D 80.707 736 83 31 557 1252 175423683 175424399 4.700000e-143 518
17 TraesCS5B01G316200 chr6D 79.024 615 67 34 557 1143 61166208 61165628 6.470000e-97 364
18 TraesCS5B01G316200 chr6D 87.907 215 26 0 553 767 447818010 447818224 1.460000e-63 254
19 TraesCS5B01G316200 chr6D 85.306 245 29 5 557 800 24260311 24260073 2.450000e-61 246
20 TraesCS5B01G316200 chr6D 83.539 243 36 2 556 798 175430837 175430599 1.150000e-54 224
21 TraesCS5B01G316200 chr6D 83.539 243 34 4 557 798 438332193 438332430 4.120000e-54 222
22 TraesCS5B01G316200 chr1B 88.021 1895 132 35 557 2410 572992371 572990531 0.000000e+00 2154
23 TraesCS5B01G316200 chr1B 89.816 1522 102 16 918 2410 647923505 647922008 0.000000e+00 1903
24 TraesCS5B01G316200 chr1B 80.282 994 122 52 557 1521 529699715 529698767 0.000000e+00 682
25 TraesCS5B01G316200 chr1B 80.677 916 101 47 557 1415 569427324 569428220 2.670000e-180 641
26 TraesCS5B01G316200 chr1B 80.306 914 107 43 557 1415 544798310 544797415 9.670000e-175 623
27 TraesCS5B01G316200 chr1B 86.364 242 28 4 557 798 94929387 94929623 3.140000e-65 259
28 TraesCS5B01G316200 chr1B 85.772 246 30 4 555 800 364281365 364281605 4.070000e-64 255
29 TraesCS5B01G316200 chr1B 85.246 244 31 4 555 798 569434210 569433972 2.450000e-61 246
30 TraesCS5B01G316200 chr6B 87.795 1909 141 42 580 2410 12465851 12467745 0.000000e+00 2150
31 TraesCS5B01G316200 chr6B 89.960 1514 97 15 927 2410 61199437 61200925 0.000000e+00 1903
32 TraesCS5B01G316200 chr6B 80.656 915 103 43 557 1415 661538893 661539789 2.670000e-180 641
33 TraesCS5B01G316200 chr3B 87.467 1923 147 46 556 2410 638378126 638380022 0.000000e+00 2130
34 TraesCS5B01G316200 chr3B 92.733 1032 56 10 1811 2825 609965006 609966035 0.000000e+00 1472
35 TraesCS5B01G316200 chr3B 83.954 1047 94 24 557 1570 609896881 609897886 0.000000e+00 935
36 TraesCS5B01G316200 chr5D 87.231 1950 123 54 554 2410 274114123 274116039 0.000000e+00 2106
37 TraesCS5B01G316200 chr5D 87.369 1148 103 22 1705 2825 257416326 257415194 0.000000e+00 1279
38 TraesCS5B01G316200 chr5D 80.773 1035 114 42 556 1534 398263633 398262628 0.000000e+00 730
39 TraesCS5B01G316200 chr5D 83.218 721 82 23 556 1252 408555344 408554639 2.690000e-175 625
40 TraesCS5B01G316200 chr5D 88.610 518 44 6 1 504 413597055 413597571 1.620000e-172 616
41 TraesCS5B01G316200 chr5D 82.917 720 77 27 556 1251 545533143 545533840 9.740000e-170 606
42 TraesCS5B01G316200 chr5D 97.151 351 10 0 2826 3176 493069138 493069488 7.590000e-166 593
43 TraesCS5B01G316200 chr5D 85.743 498 50 8 32 514 413566432 413566923 1.020000e-139 507
44 TraesCS5B01G316200 chr5D 80.223 718 76 29 558 1253 382518084 382518757 2.220000e-131 479
45 TraesCS5B01G316200 chr5D 86.319 307 19 10 1250 1534 382518787 382519092 2.380000e-81 313
46 TraesCS5B01G316200 chr5D 84.444 315 18 12 1250 1534 459924738 459924425 6.710000e-72 281
47 TraesCS5B01G316200 chr5D 83.007 306 28 8 1250 1534 408554609 408554307 4.070000e-64 255
48 TraesCS5B01G316200 chr5D 85.081 248 28 5 554 798 398256108 398256349 8.800000e-61 244
49 TraesCS5B01G316200 chr5D 84.774 243 31 4 557 798 430976835 430977072 4.090000e-59 239
50 TraesCS5B01G316200 chr3D 86.396 1970 127 48 558 2413 502048028 502046086 0.000000e+00 2023
51 TraesCS5B01G316200 chr3D 80.272 1029 106 47 556 1534 216427915 216428896 0.000000e+00 686
52 TraesCS5B01G316200 chr3D 97.151 351 10 0 2826 3176 307291595 307291945 7.590000e-166 593
53 TraesCS5B01G316200 chr3D 95.355 366 15 2 2811 3176 280596086 280596449 5.910000e-162 580
54 TraesCS5B01G316200 chr3D 82.444 712 76 32 557 1251 19766671 19765992 7.640000e-161 577
55 TraesCS5B01G316200 chr3D 86.266 233 30 2 557 788 575237124 575237355 5.260000e-63 252
56 TraesCS5B01G316200 chr2B 93.490 1275 60 4 1551 2825 80094011 80092760 0.000000e+00 1873
57 TraesCS5B01G316200 chr2B 84.715 929 63 37 641 1534 80103472 80102588 0.000000e+00 856
58 TraesCS5B01G316200 chr2B 97.159 352 9 1 2826 3176 186832152 186832503 7.590000e-166 593
59 TraesCS5B01G316200 chr4D 90.146 1299 93 18 1531 2825 97480160 97478893 0.000000e+00 1657
60 TraesCS5B01G316200 chr4D 81.801 1033 104 41 557 1534 97481197 97480194 0.000000e+00 789
61 TraesCS5B01G316200 chr4D 81.497 735 80 29 557 1252 391455571 391456288 1.290000e-153 553
62 TraesCS5B01G316200 chr4D 81.335 734 83 32 556 1251 496936501 496935784 5.990000e-152 547
63 TraesCS5B01G316200 chr4D 81.103 725 89 28 557 1252 498718570 498717865 1.300000e-148 536
64 TraesCS5B01G316200 chr4D 84.028 288 33 8 1250 1534 496935287 496935010 6.750000e-67 265
65 TraesCS5B01G316200 chr4D 83.333 306 27 8 1250 1534 375070077 375070379 8.740000e-66 261
66 TraesCS5B01G316200 chr4D 91.228 171 15 0 555 725 97474059 97474229 1.900000e-57 233
67 TraesCS5B01G316200 chr4D 84.362 243 32 4 557 798 391462773 391462536 1.900000e-57 233
68 TraesCS5B01G316200 chr4A 86.533 1448 116 25 559 1953 708367214 708365793 0.000000e+00 1520
69 TraesCS5B01G316200 chr4A 94.326 282 16 0 2544 2825 708361668 708361387 1.750000e-117 433
70 TraesCS5B01G316200 chrUn 92.316 885 57 8 1531 2410 97175501 97176379 0.000000e+00 1247
71 TraesCS5B01G316200 chrUn 91.892 888 58 9 1531 2410 97255845 97256726 0.000000e+00 1229
72 TraesCS5B01G316200 chrUn 85.464 970 65 29 559 1466 97254877 97255832 0.000000e+00 941
73 TraesCS5B01G316200 chr4B 87.607 936 68 13 557 1455 37138129 37139053 0.000000e+00 1042
74 TraesCS5B01G316200 chr7A 79.297 1053 121 51 557 1534 637872562 637873592 0.000000e+00 647
75 TraesCS5B01G316200 chr7A 97.151 351 10 0 2826 3176 55749855 55750205 7.590000e-166 593
76 TraesCS5B01G316200 chr7A 80.000 740 86 36 557 1251 147920462 147919740 1.020000e-134 490
77 TraesCS5B01G316200 chr7D 82.917 720 77 26 556 1251 393113869 393113172 9.740000e-170 606
78 TraesCS5B01G316200 chr2A 97.159 352 10 0 2825 3176 207863995 207864346 2.110000e-166 595
79 TraesCS5B01G316200 chr2D 97.151 351 10 0 2826 3176 469152133 469151783 7.590000e-166 593
80 TraesCS5B01G316200 chr2D 96.884 353 11 0 2824 3176 441256 440904 2.730000e-165 592
81 TraesCS5B01G316200 chr2D 82.083 720 81 31 557 1251 547546097 547545401 3.550000e-159 571
82 TraesCS5B01G316200 chr2D 80.194 722 94 30 556 1252 7525690 7524993 2.200000e-136 496
83 TraesCS5B01G316200 chr2D 84.774 243 31 4 557 798 147374355 147374592 4.090000e-59 239
84 TraesCS5B01G316200 chr7B 95.135 370 15 3 2810 3176 523229390 523229021 5.910000e-162 580
85 TraesCS5B01G316200 chr6A 80.816 735 82 28 555 1251 56130144 56129431 3.630000e-144 521
86 TraesCS5B01G316200 chr6A 79.696 724 87 31 552 1251 536665902 536666589 4.800000e-128 468
87 TraesCS5B01G316200 chr6A 84.959 246 30 5 556 800 536761827 536761588 3.170000e-60 243
88 TraesCS5B01G316200 chr6A 83.884 242 34 4 557 798 162661645 162661409 3.190000e-55 226
89 TraesCS5B01G316200 chr6A 90.964 166 15 0 1250 1415 428286333 428286498 1.150000e-54 224
90 TraesCS5B01G316200 chr6A 89.820 167 16 1 1250 1415 56129400 56129234 2.480000e-51 213
91 TraesCS5B01G316200 chr5A 86.392 485 57 6 1 476 525922112 525922596 3.630000e-144 521
92 TraesCS5B01G316200 chr5A 87.069 232 29 1 557 788 647573856 647573626 8.740000e-66 261
93 TraesCS5B01G316200 chr5A 90.526 95 9 0 277 371 525732948 525733042 3.330000e-25 126
94 TraesCS5B01G316200 chr3A 85.950 242 28 5 557 798 636526818 636527053 1.460000e-63 254


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G316200 chr5B 498513415 498516590 3175 False 5866 5866 100.0000 1 3176 1 chr5B.!!$F1 3175
1 TraesCS5B01G316200 chr5B 708179814 708182153 2339 True 2909 2909 89.6550 557 2825 1 chr5B.!!$R2 2268
2 TraesCS5B01G316200 chr1D 828939 831069 2130 False 2479 2479 88.3300 557 2628 1 chr1D.!!$F1 2071
3 TraesCS5B01G316200 chr1D 335412171 335414533 2362 False 1117 1744 85.6450 557 2825 2 chr1D.!!$F3 2268
4 TraesCS5B01G316200 chr1D 444898364 444899047 683 False 577 577 82.3530 556 1251 1 chr1D.!!$F2 695
5 TraesCS5B01G316200 chr1D 30073194 30073891 697 True 556 556 81.7170 557 1252 1 chr1D.!!$R1 695
6 TraesCS5B01G316200 chr6D 63805765 63807629 1864 False 2187 2187 88.1330 557 2410 1 chr6D.!!$F2 1853
7 TraesCS5B01G316200 chr6D 24255702 24256682 980 False 689 689 80.3120 557 1534 1 chr6D.!!$F1 977
8 TraesCS5B01G316200 chr6D 137509496 137510171 675 True 536 536 81.5080 567 1251 1 chr6D.!!$R3 684
9 TraesCS5B01G316200 chr6D 438338226 438338928 702 True 521 521 80.8800 557 1252 1 chr6D.!!$R5 695
10 TraesCS5B01G316200 chr6D 175423683 175424399 716 False 518 518 80.7070 557 1252 1 chr6D.!!$F3 695
11 TraesCS5B01G316200 chr6D 61165628 61166208 580 True 364 364 79.0240 557 1143 1 chr6D.!!$R2 586
12 TraesCS5B01G316200 chr1B 572990531 572992371 1840 True 2154 2154 88.0210 557 2410 1 chr1B.!!$R4 1853
13 TraesCS5B01G316200 chr1B 647922008 647923505 1497 True 1903 1903 89.8160 918 2410 1 chr1B.!!$R5 1492
14 TraesCS5B01G316200 chr1B 529698767 529699715 948 True 682 682 80.2820 557 1521 1 chr1B.!!$R1 964
15 TraesCS5B01G316200 chr1B 569427324 569428220 896 False 641 641 80.6770 557 1415 1 chr1B.!!$F3 858
16 TraesCS5B01G316200 chr1B 544797415 544798310 895 True 623 623 80.3060 557 1415 1 chr1B.!!$R2 858
17 TraesCS5B01G316200 chr6B 12465851 12467745 1894 False 2150 2150 87.7950 580 2410 1 chr6B.!!$F1 1830
18 TraesCS5B01G316200 chr6B 61199437 61200925 1488 False 1903 1903 89.9600 927 2410 1 chr6B.!!$F2 1483
19 TraesCS5B01G316200 chr6B 661538893 661539789 896 False 641 641 80.6560 557 1415 1 chr6B.!!$F3 858
20 TraesCS5B01G316200 chr3B 638378126 638380022 1896 False 2130 2130 87.4670 556 2410 1 chr3B.!!$F3 1854
21 TraesCS5B01G316200 chr3B 609965006 609966035 1029 False 1472 1472 92.7330 1811 2825 1 chr3B.!!$F2 1014
22 TraesCS5B01G316200 chr3B 609896881 609897886 1005 False 935 935 83.9540 557 1570 1 chr3B.!!$F1 1013
23 TraesCS5B01G316200 chr5D 274114123 274116039 1916 False 2106 2106 87.2310 554 2410 1 chr5D.!!$F1 1856
24 TraesCS5B01G316200 chr5D 257415194 257416326 1132 True 1279 1279 87.3690 1705 2825 1 chr5D.!!$R1 1120
25 TraesCS5B01G316200 chr5D 398262628 398263633 1005 True 730 730 80.7730 556 1534 1 chr5D.!!$R2 978
26 TraesCS5B01G316200 chr5D 413597055 413597571 516 False 616 616 88.6100 1 504 1 chr5D.!!$F4 503
27 TraesCS5B01G316200 chr5D 545533143 545533840 697 False 606 606 82.9170 556 1251 1 chr5D.!!$F7 695
28 TraesCS5B01G316200 chr5D 408554307 408555344 1037 True 440 625 83.1125 556 1534 2 chr5D.!!$R4 978
29 TraesCS5B01G316200 chr5D 382518084 382519092 1008 False 396 479 83.2710 558 1534 2 chr5D.!!$F8 976
30 TraesCS5B01G316200 chr3D 502046086 502048028 1942 True 2023 2023 86.3960 558 2413 1 chr3D.!!$R2 1855
31 TraesCS5B01G316200 chr3D 216427915 216428896 981 False 686 686 80.2720 556 1534 1 chr3D.!!$F1 978
32 TraesCS5B01G316200 chr3D 19765992 19766671 679 True 577 577 82.4440 557 1251 1 chr3D.!!$R1 694
33 TraesCS5B01G316200 chr2B 80092760 80094011 1251 True 1873 1873 93.4900 1551 2825 1 chr2B.!!$R1 1274
34 TraesCS5B01G316200 chr2B 80102588 80103472 884 True 856 856 84.7150 641 1534 1 chr2B.!!$R2 893
35 TraesCS5B01G316200 chr4D 97478893 97481197 2304 True 1223 1657 85.9735 557 2825 2 chr4D.!!$R3 2268
36 TraesCS5B01G316200 chr4D 391455571 391456288 717 False 553 553 81.4970 557 1252 1 chr4D.!!$F3 695
37 TraesCS5B01G316200 chr4D 498717865 498718570 705 True 536 536 81.1030 557 1252 1 chr4D.!!$R2 695
38 TraesCS5B01G316200 chr4D 496935010 496936501 1491 True 406 547 82.6815 556 1534 2 chr4D.!!$R4 978
39 TraesCS5B01G316200 chr4A 708365793 708367214 1421 True 1520 1520 86.5330 559 1953 1 chr4A.!!$R2 1394
40 TraesCS5B01G316200 chrUn 97175501 97176379 878 False 1247 1247 92.3160 1531 2410 1 chrUn.!!$F1 879
41 TraesCS5B01G316200 chrUn 97254877 97256726 1849 False 1085 1229 88.6780 559 2410 2 chrUn.!!$F2 1851
42 TraesCS5B01G316200 chr4B 37138129 37139053 924 False 1042 1042 87.6070 557 1455 1 chr4B.!!$F1 898
43 TraesCS5B01G316200 chr7A 637872562 637873592 1030 False 647 647 79.2970 557 1534 1 chr7A.!!$F2 977
44 TraesCS5B01G316200 chr7A 147919740 147920462 722 True 490 490 80.0000 557 1251 1 chr7A.!!$R1 694
45 TraesCS5B01G316200 chr7D 393113172 393113869 697 True 606 606 82.9170 556 1251 1 chr7D.!!$R1 695
46 TraesCS5B01G316200 chr2D 547545401 547546097 696 True 571 571 82.0830 557 1251 1 chr2D.!!$R4 694
47 TraesCS5B01G316200 chr2D 7524993 7525690 697 True 496 496 80.1940 556 1252 1 chr2D.!!$R2 696
48 TraesCS5B01G316200 chr6A 536665902 536666589 687 False 468 468 79.6960 552 1251 1 chr6A.!!$F2 699
49 TraesCS5B01G316200 chr6A 56129234 56130144 910 True 367 521 85.3180 555 1415 2 chr6A.!!$R3 860

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
90 93 0.036164 TGCGGTAGCCATGTTCTTGT 59.964 50.0 0.00 0.0 44.33 3.16 F
143 146 0.527565 GCACCAGTCGCCAAATGAAT 59.472 50.0 0.00 0.0 0.00 2.57 F
1288 2030 0.681243 GACCATTGTGGAGCCCCTTC 60.681 60.0 2.45 0.0 40.96 3.46 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1727 2670 0.032615 AACCTTGGCCAACTCCAACA 60.033 50.000 16.05 0.0 40.92 3.33 R
1730 2673 1.777878 TCTTAACCTTGGCCAACTCCA 59.222 47.619 16.05 0.0 0.00 3.86 R
3117 4120 0.038455 CCCATTGGTCGGGGTTGTTA 59.962 55.000 1.20 0.0 40.35 2.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 1.281419 TACAACGGGACATGGGTCAT 58.719 50.000 0.00 0.00 46.17 3.06
22 23 0.991920 AACGGGACATGGGTCATCTT 59.008 50.000 0.00 0.00 46.17 2.40
26 27 3.009695 ACGGGACATGGGTCATCTTAAAA 59.990 43.478 0.00 0.00 46.17 1.52
27 28 4.207165 CGGGACATGGGTCATCTTAAAAT 58.793 43.478 0.00 0.00 46.17 1.82
29 30 5.470098 CGGGACATGGGTCATCTTAAAATAG 59.530 44.000 0.00 0.00 46.17 1.73
54 55 2.831770 CCAGGTATCATGCGCCCT 59.168 61.111 4.18 0.00 0.00 5.19
70 71 1.376812 CCTGCACAGAGCTCATGCA 60.377 57.895 31.78 31.78 46.73 3.96
87 90 1.097547 GCATGCGGTAGCCATGTTCT 61.098 55.000 18.42 0.00 44.33 3.01
90 93 0.036164 TGCGGTAGCCATGTTCTTGT 59.964 50.000 0.00 0.00 44.33 3.16
93 96 2.632377 CGGTAGCCATGTTCTTGTGAT 58.368 47.619 0.00 0.00 0.00 3.06
121 124 6.265196 AGCACTTCACCAAATGAAATTGAGTA 59.735 34.615 0.00 0.00 46.80 2.59
122 125 7.039504 AGCACTTCACCAAATGAAATTGAGTAT 60.040 33.333 0.00 0.00 46.80 2.12
125 128 7.599998 ACTTCACCAAATGAAATTGAGTATTGC 59.400 33.333 0.00 0.00 46.80 3.56
126 129 6.990798 TCACCAAATGAAATTGAGTATTGCA 58.009 32.000 0.00 0.00 36.10 4.08
128 131 6.091169 CACCAAATGAAATTGAGTATTGCACC 59.909 38.462 0.00 0.00 34.53 5.01
143 146 0.527565 GCACCAGTCGCCAAATGAAT 59.472 50.000 0.00 0.00 0.00 2.57
152 155 5.122239 CAGTCGCCAAATGAATACTTGAAGA 59.878 40.000 0.00 0.00 0.00 2.87
174 177 3.981071 TCGATGGAACCTGAACATTCT 57.019 42.857 0.00 0.00 0.00 2.40
192 195 8.511604 AACATTCTAAATCGAATTCCACTCAT 57.488 30.769 0.00 0.00 31.52 2.90
198 201 4.889832 ATCGAATTCCACTCATTGCTTC 57.110 40.909 0.00 0.00 0.00 3.86
199 202 3.942829 TCGAATTCCACTCATTGCTTCT 58.057 40.909 0.00 0.00 0.00 2.85
200 203 3.686241 TCGAATTCCACTCATTGCTTCTG 59.314 43.478 0.00 0.00 0.00 3.02
201 204 3.686241 CGAATTCCACTCATTGCTTCTGA 59.314 43.478 0.00 0.00 0.00 3.27
203 206 5.638783 GAATTCCACTCATTGCTTCTGAAG 58.361 41.667 13.02 13.02 0.00 3.02
204 207 3.777106 TCCACTCATTGCTTCTGAAGT 57.223 42.857 17.97 0.00 0.00 3.01
205 208 4.890158 TCCACTCATTGCTTCTGAAGTA 57.110 40.909 17.97 11.52 0.00 2.24
222 226 4.284490 TGAAGTAGTGTGAGATGAGCCTTT 59.716 41.667 0.00 0.00 0.00 3.11
247 251 5.338708 CCTTTCTTCAAGCCATCCTTCTCTA 60.339 44.000 0.00 0.00 0.00 2.43
256 261 9.479549 TCAAGCCATCCTTCTCTATTAATTTTT 57.520 29.630 0.00 0.00 0.00 1.94
282 287 3.132111 TCATAGTCATGCAGTAAGCCGAA 59.868 43.478 0.00 0.00 44.83 4.30
284 289 1.001974 AGTCATGCAGTAAGCCGAACA 59.998 47.619 0.00 0.00 44.83 3.18
295 300 5.408604 CAGTAAGCCGAACAGACTGTAAATT 59.591 40.000 8.91 3.03 34.20 1.82
305 310 5.730550 ACAGACTGTAAATTTGCCTCGATA 58.269 37.500 6.24 0.00 0.00 2.92
314 319 5.505173 AATTTGCCTCGATATTCCTTGTG 57.495 39.130 0.00 0.00 0.00 3.33
320 325 1.279840 GATATTCCTTGTGCCGCGC 59.720 57.895 0.00 0.00 0.00 6.86
421 426 1.909302 ACAAGTTCGTCCCTCCATGAT 59.091 47.619 0.00 0.00 0.00 2.45
422 427 3.104512 ACAAGTTCGTCCCTCCATGATA 58.895 45.455 0.00 0.00 0.00 2.15
424 429 2.040178 AGTTCGTCCCTCCATGATACC 58.960 52.381 0.00 0.00 0.00 2.73
435 440 3.296854 TCCATGATACCGTAGCACTCTT 58.703 45.455 0.00 0.00 0.00 2.85
436 441 3.068165 TCCATGATACCGTAGCACTCTTG 59.932 47.826 0.00 0.00 0.00 3.02
447 452 1.427592 GCACTCTTGATGAGCTCCGC 61.428 60.000 12.15 3.43 46.41 5.54
476 481 1.826487 GGCGGGTTTTGGACAGTGT 60.826 57.895 0.00 0.00 0.00 3.55
477 482 1.388837 GGCGGGTTTTGGACAGTGTT 61.389 55.000 0.00 0.00 0.00 3.32
481 486 3.429135 GCGGGTTTTGGACAGTGTTTTTA 60.429 43.478 0.00 0.00 0.00 1.52
482 487 4.356289 CGGGTTTTGGACAGTGTTTTTAG 58.644 43.478 0.00 0.00 0.00 1.85
483 488 4.689071 GGGTTTTGGACAGTGTTTTTAGG 58.311 43.478 0.00 0.00 0.00 2.69
484 489 4.442332 GGGTTTTGGACAGTGTTTTTAGGG 60.442 45.833 0.00 0.00 0.00 3.53
485 490 4.442332 GGTTTTGGACAGTGTTTTTAGGGG 60.442 45.833 0.00 0.00 0.00 4.79
486 491 3.673543 TTGGACAGTGTTTTTAGGGGT 57.326 42.857 0.00 0.00 0.00 4.95
487 492 3.673543 TGGACAGTGTTTTTAGGGGTT 57.326 42.857 0.00 0.00 0.00 4.11
488 493 3.983821 TGGACAGTGTTTTTAGGGGTTT 58.016 40.909 0.00 0.00 0.00 3.27
489 494 4.354662 TGGACAGTGTTTTTAGGGGTTTT 58.645 39.130 0.00 0.00 0.00 2.43
490 495 4.778427 TGGACAGTGTTTTTAGGGGTTTTT 59.222 37.500 0.00 0.00 0.00 1.94
491 496 5.113383 GGACAGTGTTTTTAGGGGTTTTTG 58.887 41.667 0.00 0.00 0.00 2.44
492 497 5.092554 ACAGTGTTTTTAGGGGTTTTTGG 57.907 39.130 0.00 0.00 0.00 3.28
493 498 4.778427 ACAGTGTTTTTAGGGGTTTTTGGA 59.222 37.500 0.00 0.00 0.00 3.53
494 499 5.113383 CAGTGTTTTTAGGGGTTTTTGGAC 58.887 41.667 0.00 0.00 0.00 4.02
495 500 4.778427 AGTGTTTTTAGGGGTTTTTGGACA 59.222 37.500 0.00 0.00 0.00 4.02
496 501 5.105106 AGTGTTTTTAGGGGTTTTTGGACAG 60.105 40.000 0.00 0.00 0.00 3.51
497 502 4.778427 TGTTTTTAGGGGTTTTTGGACAGT 59.222 37.500 0.00 0.00 0.00 3.55
498 503 5.113383 GTTTTTAGGGGTTTTTGGACAGTG 58.887 41.667 0.00 0.00 0.00 3.66
499 504 2.668144 TAGGGGTTTTTGGACAGTGG 57.332 50.000 0.00 0.00 0.00 4.00
500 505 0.930726 AGGGGTTTTTGGACAGTGGA 59.069 50.000 0.00 0.00 0.00 4.02
501 506 1.503347 AGGGGTTTTTGGACAGTGGAT 59.497 47.619 0.00 0.00 0.00 3.41
529 534 1.618343 GGGGTTTTTGGACAGTGGATG 59.382 52.381 0.00 0.00 0.00 3.51
530 535 1.000843 GGGTTTTTGGACAGTGGATGC 59.999 52.381 0.00 0.00 0.00 3.91
531 536 1.686052 GGTTTTTGGACAGTGGATGCA 59.314 47.619 0.00 0.00 0.00 3.96
532 537 2.102252 GGTTTTTGGACAGTGGATGCAA 59.898 45.455 0.00 0.00 0.00 4.08
533 538 3.244181 GGTTTTTGGACAGTGGATGCAAT 60.244 43.478 0.00 0.00 0.00 3.56
534 539 4.379652 GTTTTTGGACAGTGGATGCAATT 58.620 39.130 0.00 0.00 0.00 2.32
535 540 3.663995 TTTGGACAGTGGATGCAATTG 57.336 42.857 0.00 0.00 0.00 2.32
536 541 1.548081 TGGACAGTGGATGCAATTGG 58.452 50.000 7.72 0.00 0.00 3.16
537 542 1.075212 TGGACAGTGGATGCAATTGGA 59.925 47.619 7.72 4.46 0.00 3.53
538 543 1.474077 GGACAGTGGATGCAATTGGAC 59.526 52.381 7.72 0.00 0.00 4.02
539 544 1.131126 GACAGTGGATGCAATTGGACG 59.869 52.381 7.72 0.00 0.00 4.79
540 545 1.167851 CAGTGGATGCAATTGGACGT 58.832 50.000 7.72 0.00 0.00 4.34
541 546 1.541147 CAGTGGATGCAATTGGACGTT 59.459 47.619 7.72 0.00 0.00 3.99
542 547 2.030007 CAGTGGATGCAATTGGACGTTT 60.030 45.455 7.72 0.00 0.00 3.60
543 548 2.030007 AGTGGATGCAATTGGACGTTTG 60.030 45.455 7.72 0.00 0.00 2.93
544 549 1.959985 TGGATGCAATTGGACGTTTGT 59.040 42.857 7.72 0.00 0.00 2.83
545 550 3.057876 GTGGATGCAATTGGACGTTTGTA 60.058 43.478 7.72 0.00 0.00 2.41
546 551 3.190327 TGGATGCAATTGGACGTTTGTAG 59.810 43.478 7.72 0.00 0.00 2.74
547 552 2.697431 TGCAATTGGACGTTTGTAGC 57.303 45.000 7.72 0.00 0.00 3.58
548 553 2.226330 TGCAATTGGACGTTTGTAGCT 58.774 42.857 7.72 0.00 0.00 3.32
549 554 2.031245 TGCAATTGGACGTTTGTAGCTG 60.031 45.455 7.72 0.00 0.00 4.24
550 555 2.031157 GCAATTGGACGTTTGTAGCTGT 60.031 45.455 7.72 0.00 0.00 4.40
589 594 5.049198 GCATAAAACTACCGGTTTATAGGCC 60.049 44.000 15.04 0.00 46.18 5.19
870 942 1.037030 CCTGCTCGCTCTCTCTCCTT 61.037 60.000 0.00 0.00 0.00 3.36
874 946 2.016604 GCTCGCTCTCTCTCCTTCTCA 61.017 57.143 0.00 0.00 0.00 3.27
944 1082 4.697756 CGACCTCCTTGCCGCCAA 62.698 66.667 0.00 0.00 0.00 4.52
967 1105 1.267121 TTCCTGGAACGAGGAGGAAG 58.733 55.000 4.68 0.00 43.26 3.46
1075 1258 2.241430 TGCTAGTAGACCTAGGCACTGA 59.759 50.000 9.30 0.00 43.00 3.41
1288 2030 0.681243 GACCATTGTGGAGCCCCTTC 60.681 60.000 2.45 0.00 40.96 3.46
1354 2134 3.367292 CCAAATGAGGCATGTTAAGCGTT 60.367 43.478 0.00 0.00 0.00 4.84
1395 2180 1.906574 ACAGGAAGGCGTTTCTATGGA 59.093 47.619 0.00 0.00 36.03 3.41
1425 2230 7.419518 CCAGTCCAGGTTAGATATTGATGTTCT 60.420 40.741 0.00 0.00 0.00 3.01
1428 2233 7.870445 GTCCAGGTTAGATATTGATGTTCTCTC 59.130 40.741 0.00 0.00 0.00 3.20
1472 2300 9.209175 AGTTTGTTACTGATATGAAAGTCACTC 57.791 33.333 0.00 0.00 35.19 3.51
1511 2342 7.385267 ACTTTGCAAACTTAATCATGGCATTA 58.615 30.769 8.05 0.00 0.00 1.90
1825 2789 4.499696 GCATTGAGTACACCAAGCTTGTTT 60.500 41.667 24.35 8.78 0.00 2.83
2026 2993 4.319333 GCCAAGCTGATATCATCAAGAACG 60.319 45.833 5.72 0.00 39.11 3.95
2089 3056 6.942576 TGTTCTTATGAAGGAGAAGGAAAAGG 59.057 38.462 0.00 0.00 32.91 3.11
2115 3082 2.149578 CTAGTTGTTGCTGAGCTGCTT 58.850 47.619 5.83 0.00 0.00 3.91
2239 3212 0.329596 AGGATGTGGCCTTTCTGTCC 59.670 55.000 3.32 3.18 33.46 4.02
2333 3307 8.828688 ACTTTAGTGTCTTATGTAAGAACCAC 57.171 34.615 12.22 12.22 43.30 4.16
2348 3322 5.886960 AGAACCACATTTGCTATGTTCTC 57.113 39.130 2.78 1.60 38.33 2.87
2417 3392 2.744202 GGATCTTATATGCTGTTGGCCG 59.256 50.000 0.00 0.00 40.92 6.13
2425 3400 0.107831 TGCTGTTGGCCGTAAGTCTT 59.892 50.000 0.00 0.00 40.92 3.01
2427 3402 1.069227 GCTGTTGGCCGTAAGTCTTTG 60.069 52.381 0.00 0.00 34.27 2.77
2479 3471 3.390175 AGTGGGCTAGTAGTCTGTGAT 57.610 47.619 1.01 0.00 0.00 3.06
2512 3504 6.705302 ACTTACTTAGGCCTACTAAAACCAC 58.295 40.000 13.46 0.00 40.97 4.16
2534 3528 1.073199 CCCCTCCACCACTGTGAAC 59.927 63.158 9.86 0.00 45.76 3.18
2628 3631 0.179034 GACATGGACCTGGGAGATGC 60.179 60.000 0.00 0.00 0.00 3.91
2651 3654 2.623431 AGGAGGAGGGAGAGGCCT 60.623 66.667 3.86 3.86 36.66 5.19
2653 3656 1.307430 GGAGGAGGGAGAGGCCTTT 60.307 63.158 6.77 0.00 36.66 3.11
2825 3828 2.674220 CCTGGTGGGAGGAGAAGGC 61.674 68.421 0.00 0.00 34.69 4.35
2826 3829 1.920325 CTGGTGGGAGGAGAAGGCA 60.920 63.158 0.00 0.00 0.00 4.75
2827 3830 2.190488 CTGGTGGGAGGAGAAGGCAC 62.190 65.000 0.00 0.00 0.00 5.01
2829 3832 0.617820 GGTGGGAGGAGAAGGCACTA 60.618 60.000 0.00 0.00 38.49 2.74
2830 3833 0.537653 GTGGGAGGAGAAGGCACTAC 59.462 60.000 0.00 0.00 38.49 2.73
2831 3834 0.116342 TGGGAGGAGAAGGCACTACA 59.884 55.000 0.00 0.00 38.49 2.74
2832 3835 1.276622 GGGAGGAGAAGGCACTACAA 58.723 55.000 0.00 0.00 38.49 2.41
2833 3836 1.628846 GGGAGGAGAAGGCACTACAAA 59.371 52.381 0.00 0.00 38.49 2.83
2834 3837 2.039879 GGGAGGAGAAGGCACTACAAAA 59.960 50.000 0.00 0.00 38.49 2.44
2835 3838 3.497942 GGGAGGAGAAGGCACTACAAAAA 60.498 47.826 0.00 0.00 38.49 1.94
2858 3861 7.591006 AAAATACACTTTCGTGATGATACGT 57.409 32.000 0.00 0.00 43.97 3.57
2859 3862 6.569228 AATACACTTTCGTGATGATACGTG 57.431 37.500 0.00 0.00 43.97 4.49
2860 3863 3.909430 ACACTTTCGTGATGATACGTGT 58.091 40.909 0.00 0.00 43.97 4.49
2861 3864 4.304110 ACACTTTCGTGATGATACGTGTT 58.696 39.130 0.00 0.00 43.97 3.32
2862 3865 4.748102 ACACTTTCGTGATGATACGTGTTT 59.252 37.500 0.00 0.00 43.97 2.83
2863 3866 5.072823 CACTTTCGTGATGATACGTGTTTG 58.927 41.667 0.00 0.00 43.97 2.93
2864 3867 4.748102 ACTTTCGTGATGATACGTGTTTGT 59.252 37.500 0.00 0.00 44.06 2.83
2865 3868 4.896562 TTCGTGATGATACGTGTTTGTC 57.103 40.909 0.00 0.00 44.06 3.18
2866 3869 3.903360 TCGTGATGATACGTGTTTGTCA 58.097 40.909 0.00 0.00 44.06 3.58
2867 3870 3.671459 TCGTGATGATACGTGTTTGTCAC 59.329 43.478 0.00 6.93 44.06 3.67
2868 3871 3.427193 CGTGATGATACGTGTTTGTCACA 59.573 43.478 18.33 0.60 46.44 3.58
2869 3872 4.432892 CGTGATGATACGTGTTTGTCACAG 60.433 45.833 18.33 11.29 46.44 3.66
2870 3873 4.447724 GTGATGATACGTGTTTGTCACAGT 59.552 41.667 15.50 0.00 46.44 3.55
2871 3874 5.631929 GTGATGATACGTGTTTGTCACAGTA 59.368 40.000 15.50 0.00 46.44 2.74
2872 3875 5.861787 TGATGATACGTGTTTGTCACAGTAG 59.138 40.000 0.00 0.00 46.44 2.57
2873 3876 4.552355 TGATACGTGTTTGTCACAGTAGG 58.448 43.478 0.00 0.00 46.44 3.18
2874 3877 2.973694 ACGTGTTTGTCACAGTAGGT 57.026 45.000 0.00 0.00 46.44 3.08
2875 3878 2.817901 ACGTGTTTGTCACAGTAGGTC 58.182 47.619 0.00 0.00 46.44 3.85
2876 3879 1.784856 CGTGTTTGTCACAGTAGGTCG 59.215 52.381 0.00 0.00 46.44 4.79
2877 3880 1.525619 GTGTTTGTCACAGTAGGTCGC 59.474 52.381 0.00 0.00 45.51 5.19
2878 3881 1.137282 TGTTTGTCACAGTAGGTCGCA 59.863 47.619 0.00 0.00 0.00 5.10
2879 3882 2.224185 TGTTTGTCACAGTAGGTCGCAT 60.224 45.455 0.00 0.00 0.00 4.73
2880 3883 2.806244 GTTTGTCACAGTAGGTCGCATT 59.194 45.455 0.00 0.00 0.00 3.56
2881 3884 2.831685 TGTCACAGTAGGTCGCATTT 57.168 45.000 0.00 0.00 0.00 2.32
2882 3885 3.120321 TGTCACAGTAGGTCGCATTTT 57.880 42.857 0.00 0.00 0.00 1.82
2883 3886 3.472652 TGTCACAGTAGGTCGCATTTTT 58.527 40.909 0.00 0.00 0.00 1.94
2902 3905 5.718724 TTTTTGTCATGCATGTACATCCA 57.281 34.783 25.43 2.99 0.00 3.41
2903 3906 5.918426 TTTTGTCATGCATGTACATCCAT 57.082 34.783 25.43 6.44 0.00 3.41
2904 3907 4.904253 TTGTCATGCATGTACATCCATG 57.096 40.909 27.23 27.23 44.07 3.66
2905 3908 4.153673 TGTCATGCATGTACATCCATGA 57.846 40.909 30.25 30.25 43.99 3.07
2907 3910 3.132925 TCATGCATGTACATCCATGACG 58.867 45.455 30.25 12.42 43.99 4.35
2908 3911 2.977772 TGCATGTACATCCATGACGA 57.022 45.000 5.07 0.00 43.99 4.20
2909 3912 3.473923 TGCATGTACATCCATGACGAT 57.526 42.857 5.07 0.00 43.99 3.73
2910 3913 3.807553 TGCATGTACATCCATGACGATT 58.192 40.909 5.07 0.00 43.99 3.34
2911 3914 4.198530 TGCATGTACATCCATGACGATTT 58.801 39.130 5.07 0.00 43.99 2.17
2912 3915 4.639755 TGCATGTACATCCATGACGATTTT 59.360 37.500 5.07 0.00 43.99 1.82
2913 3916 5.819901 TGCATGTACATCCATGACGATTTTA 59.180 36.000 5.07 0.00 43.99 1.52
2914 3917 6.486320 TGCATGTACATCCATGACGATTTTAT 59.514 34.615 5.07 0.00 43.99 1.40
2915 3918 6.798476 GCATGTACATCCATGACGATTTTATG 59.202 38.462 5.07 0.00 43.99 1.90
2916 3919 7.307930 GCATGTACATCCATGACGATTTTATGA 60.308 37.037 5.07 0.00 43.99 2.15
2917 3920 7.477144 TGTACATCCATGACGATTTTATGAC 57.523 36.000 0.00 0.00 0.00 3.06
2918 3921 7.044798 TGTACATCCATGACGATTTTATGACA 58.955 34.615 0.00 0.00 0.00 3.58
2919 3922 6.609237 ACATCCATGACGATTTTATGACAG 57.391 37.500 0.00 0.00 0.00 3.51
2920 3923 6.348498 ACATCCATGACGATTTTATGACAGA 58.652 36.000 0.00 0.00 0.00 3.41
2921 3924 6.823182 ACATCCATGACGATTTTATGACAGAA 59.177 34.615 0.00 0.00 0.00 3.02
2922 3925 7.500227 ACATCCATGACGATTTTATGACAGAAT 59.500 33.333 0.00 0.00 0.00 2.40
2923 3926 7.482654 TCCATGACGATTTTATGACAGAATC 57.517 36.000 0.00 0.00 0.00 2.52
2924 3927 7.047271 TCCATGACGATTTTATGACAGAATCA 58.953 34.615 0.00 0.00 43.13 2.57
2925 3928 7.552330 TCCATGACGATTTTATGACAGAATCAA 59.448 33.333 0.00 0.00 41.93 2.57
2926 3929 7.854422 CCATGACGATTTTATGACAGAATCAAG 59.146 37.037 0.00 0.00 41.93 3.02
2927 3930 8.606602 CATGACGATTTTATGACAGAATCAAGA 58.393 33.333 0.00 0.00 41.93 3.02
2928 3931 8.722480 TGACGATTTTATGACAGAATCAAGAT 57.278 30.769 0.00 0.00 41.93 2.40
2929 3932 9.816354 TGACGATTTTATGACAGAATCAAGATA 57.184 29.630 0.00 0.00 41.93 1.98
2931 3934 9.823647 ACGATTTTATGACAGAATCAAGATAGT 57.176 29.630 0.00 0.00 41.93 2.12
2938 3941 7.904558 TGACAGAATCAAGATAGTCATACCT 57.095 36.000 8.09 0.00 33.02 3.08
2939 3942 7.720442 TGACAGAATCAAGATAGTCATACCTG 58.280 38.462 8.09 0.00 33.02 4.00
2940 3943 7.343057 TGACAGAATCAAGATAGTCATACCTGT 59.657 37.037 0.00 0.00 33.02 4.00
2941 3944 7.495901 ACAGAATCAAGATAGTCATACCTGTG 58.504 38.462 0.00 0.00 0.00 3.66
2942 3945 7.343057 ACAGAATCAAGATAGTCATACCTGTGA 59.657 37.037 0.00 0.00 0.00 3.58
2943 3946 8.366401 CAGAATCAAGATAGTCATACCTGTGAT 58.634 37.037 0.00 0.00 0.00 3.06
2944 3947 8.366401 AGAATCAAGATAGTCATACCTGTGATG 58.634 37.037 0.00 0.00 0.00 3.07
2945 3948 7.609097 ATCAAGATAGTCATACCTGTGATGT 57.391 36.000 0.00 0.00 0.00 3.06
2946 3949 7.043961 TCAAGATAGTCATACCTGTGATGTC 57.956 40.000 0.00 0.00 0.00 3.06
2947 3950 5.697473 AGATAGTCATACCTGTGATGTCG 57.303 43.478 0.00 0.00 0.00 4.35
2948 3951 5.133941 AGATAGTCATACCTGTGATGTCGT 58.866 41.667 0.00 0.00 0.00 4.34
2949 3952 6.296803 AGATAGTCATACCTGTGATGTCGTA 58.703 40.000 0.00 0.00 0.00 3.43
2950 3953 4.902443 AGTCATACCTGTGATGTCGTAG 57.098 45.455 0.00 0.00 0.00 3.51
2951 3954 4.524053 AGTCATACCTGTGATGTCGTAGA 58.476 43.478 0.00 0.00 0.00 2.59
2952 3955 4.948004 AGTCATACCTGTGATGTCGTAGAA 59.052 41.667 0.00 0.00 39.69 2.10
2953 3956 5.066634 AGTCATACCTGTGATGTCGTAGAAG 59.933 44.000 0.00 0.00 39.69 2.85
2954 3957 4.948004 TCATACCTGTGATGTCGTAGAAGT 59.052 41.667 0.00 0.00 39.69 3.01
2955 3958 3.577649 ACCTGTGATGTCGTAGAAGTG 57.422 47.619 0.00 0.00 39.69 3.16
2956 3959 2.891580 ACCTGTGATGTCGTAGAAGTGT 59.108 45.455 0.00 0.00 39.69 3.55
2957 3960 3.321111 ACCTGTGATGTCGTAGAAGTGTT 59.679 43.478 0.00 0.00 39.69 3.32
2958 3961 3.921021 CCTGTGATGTCGTAGAAGTGTTC 59.079 47.826 0.00 0.00 39.69 3.18
2959 3962 3.909430 TGTGATGTCGTAGAAGTGTTCC 58.091 45.455 0.00 0.00 39.69 3.62
2960 3963 3.319689 TGTGATGTCGTAGAAGTGTTCCA 59.680 43.478 0.00 0.00 39.69 3.53
2961 3964 4.021456 TGTGATGTCGTAGAAGTGTTCCAT 60.021 41.667 0.00 0.00 39.69 3.41
2962 3965 4.327357 GTGATGTCGTAGAAGTGTTCCATG 59.673 45.833 0.00 0.00 39.69 3.66
2963 3966 4.219725 TGATGTCGTAGAAGTGTTCCATGA 59.780 41.667 0.00 0.00 39.69 3.07
2964 3967 3.909430 TGTCGTAGAAGTGTTCCATGAC 58.091 45.455 0.00 1.80 39.69 3.06
2965 3968 3.319689 TGTCGTAGAAGTGTTCCATGACA 59.680 43.478 6.17 6.17 42.33 3.58
2966 3969 4.021456 TGTCGTAGAAGTGTTCCATGACAT 60.021 41.667 6.17 0.00 40.63 3.06
2967 3970 4.929808 GTCGTAGAAGTGTTCCATGACATT 59.070 41.667 0.00 0.00 39.69 2.71
2968 3971 6.097356 GTCGTAGAAGTGTTCCATGACATTA 58.903 40.000 0.00 0.00 39.69 1.90
2969 3972 6.034683 GTCGTAGAAGTGTTCCATGACATTAC 59.965 42.308 0.00 0.00 39.69 1.89
2970 3973 5.291128 CGTAGAAGTGTTCCATGACATTACC 59.709 44.000 0.00 0.00 0.00 2.85
2971 3974 5.241403 AGAAGTGTTCCATGACATTACCA 57.759 39.130 0.00 0.00 0.00 3.25
2972 3975 5.630121 AGAAGTGTTCCATGACATTACCAA 58.370 37.500 0.00 0.00 0.00 3.67
2973 3976 6.068010 AGAAGTGTTCCATGACATTACCAAA 58.932 36.000 0.00 0.00 0.00 3.28
2974 3977 6.549364 AGAAGTGTTCCATGACATTACCAAAA 59.451 34.615 0.00 0.00 0.00 2.44
2975 3978 6.916360 AGTGTTCCATGACATTACCAAAAT 57.084 33.333 0.00 0.00 0.00 1.82
2976 3979 7.301868 AGTGTTCCATGACATTACCAAAATT 57.698 32.000 0.00 0.00 0.00 1.82
2977 3980 8.415950 AGTGTTCCATGACATTACCAAAATTA 57.584 30.769 0.00 0.00 0.00 1.40
2978 3981 9.034800 AGTGTTCCATGACATTACCAAAATTAT 57.965 29.630 0.00 0.00 0.00 1.28
2979 3982 9.301153 GTGTTCCATGACATTACCAAAATTATC 57.699 33.333 0.00 0.00 0.00 1.75
2980 3983 9.029368 TGTTCCATGACATTACCAAAATTATCA 57.971 29.630 0.00 0.00 0.00 2.15
2983 3986 9.418839 TCCATGACATTACCAAAATTATCATCA 57.581 29.630 0.00 0.00 0.00 3.07
2984 3987 9.467258 CCATGACATTACCAAAATTATCATCAC 57.533 33.333 0.00 0.00 0.00 3.06
2985 3988 9.172820 CATGACATTACCAAAATTATCATCACG 57.827 33.333 0.00 0.00 0.00 4.35
2986 3989 7.702386 TGACATTACCAAAATTATCATCACGG 58.298 34.615 0.00 0.00 0.00 4.94
2987 3990 7.554476 TGACATTACCAAAATTATCATCACGGA 59.446 33.333 0.00 0.00 0.00 4.69
2988 3991 8.287439 ACATTACCAAAATTATCATCACGGAA 57.713 30.769 0.00 0.00 0.00 4.30
2989 3992 8.405531 ACATTACCAAAATTATCATCACGGAAG 58.594 33.333 0.00 0.00 0.00 3.46
3006 4009 3.914984 AGTGTCCACTTCCATGACG 57.085 52.632 0.00 0.00 38.83 4.35
3007 4010 1.338107 AGTGTCCACTTCCATGACGA 58.662 50.000 0.00 0.00 38.83 4.20
3008 4011 1.902508 AGTGTCCACTTCCATGACGAT 59.097 47.619 0.00 0.00 38.83 3.73
3009 4012 3.096852 AGTGTCCACTTCCATGACGATA 58.903 45.455 0.00 0.00 38.83 2.92
3010 4013 3.513912 AGTGTCCACTTCCATGACGATAA 59.486 43.478 0.00 0.00 38.83 1.75
3011 4014 4.020573 AGTGTCCACTTCCATGACGATAAA 60.021 41.667 0.00 0.00 38.83 1.40
3012 4015 4.876107 GTGTCCACTTCCATGACGATAAAT 59.124 41.667 0.00 0.00 0.00 1.40
3013 4016 5.354234 GTGTCCACTTCCATGACGATAAATT 59.646 40.000 0.00 0.00 0.00 1.82
3014 4017 5.353956 TGTCCACTTCCATGACGATAAATTG 59.646 40.000 0.00 0.00 0.00 2.32
3015 4018 4.335315 TCCACTTCCATGACGATAAATTGC 59.665 41.667 0.00 0.00 0.00 3.56
3016 4019 4.274069 CACTTCCATGACGATAAATTGCG 58.726 43.478 0.00 0.00 0.00 4.85
3017 4020 3.242739 ACTTCCATGACGATAAATTGCGC 60.243 43.478 0.00 0.00 0.00 6.09
3018 4021 2.284190 TCCATGACGATAAATTGCGCA 58.716 42.857 5.66 5.66 0.00 6.09
3019 4022 2.877786 TCCATGACGATAAATTGCGCAT 59.122 40.909 12.75 0.00 0.00 4.73
3020 4023 3.058983 TCCATGACGATAAATTGCGCATC 60.059 43.478 12.75 3.98 0.00 3.91
3021 4024 3.303924 CCATGACGATAAATTGCGCATCA 60.304 43.478 12.75 10.07 0.00 3.07
3022 4025 3.317744 TGACGATAAATTGCGCATCAC 57.682 42.857 12.75 3.12 0.00 3.06
3023 4026 2.675348 TGACGATAAATTGCGCATCACA 59.325 40.909 12.75 5.85 0.00 3.58
3024 4027 3.242381 TGACGATAAATTGCGCATCACAG 60.242 43.478 12.75 2.39 0.00 3.66
3025 4028 2.935849 ACGATAAATTGCGCATCACAGA 59.064 40.909 12.75 0.00 0.00 3.41
3026 4029 3.373748 ACGATAAATTGCGCATCACAGAA 59.626 39.130 12.75 0.00 0.00 3.02
3027 4030 3.964347 CGATAAATTGCGCATCACAGAAG 59.036 43.478 12.75 0.00 0.00 2.85
3028 4031 4.494690 CGATAAATTGCGCATCACAGAAGT 60.495 41.667 12.75 0.00 0.00 3.01
3030 4033 0.169672 ATTGCGCATCACAGAAGTGC 59.830 50.000 12.75 1.31 45.49 4.40
3031 4034 0.886043 TTGCGCATCACAGAAGTGCT 60.886 50.000 12.75 0.00 45.49 4.40
3032 4035 0.886043 TGCGCATCACAGAAGTGCTT 60.886 50.000 5.66 0.00 45.49 3.91
3033 4036 0.239347 GCGCATCACAGAAGTGCTTT 59.761 50.000 0.30 0.00 45.49 3.51
3034 4037 1.727213 GCGCATCACAGAAGTGCTTTC 60.727 52.381 0.30 0.00 45.49 2.62
3035 4038 1.463034 CGCATCACAGAAGTGCTTTCG 60.463 52.381 0.00 0.00 45.49 3.46
3036 4039 1.532868 GCATCACAGAAGTGCTTTCGT 59.467 47.619 0.00 0.00 45.49 3.85
3037 4040 2.412065 GCATCACAGAAGTGCTTTCGTC 60.412 50.000 0.00 0.00 45.49 4.20
3038 4041 2.595124 TCACAGAAGTGCTTTCGTCA 57.405 45.000 0.00 0.00 45.49 4.35
3039 4042 2.899976 TCACAGAAGTGCTTTCGTCAA 58.100 42.857 0.00 0.00 45.49 3.18
3040 4043 2.866156 TCACAGAAGTGCTTTCGTCAAG 59.134 45.455 0.00 0.00 45.49 3.02
3041 4044 2.032549 CACAGAAGTGCTTTCGTCAAGG 60.033 50.000 0.00 0.00 40.86 3.61
3042 4045 1.532868 CAGAAGTGCTTTCGTCAAGGG 59.467 52.381 0.00 0.00 40.86 3.95
3043 4046 1.141053 AGAAGTGCTTTCGTCAAGGGT 59.859 47.619 0.00 0.00 40.86 4.34
3044 4047 1.264288 GAAGTGCTTTCGTCAAGGGTG 59.736 52.381 0.00 0.00 32.37 4.61
3045 4048 0.468226 AGTGCTTTCGTCAAGGGTGA 59.532 50.000 0.00 0.00 32.37 4.02
3059 4062 2.357034 GTGACCGACACGTGGCAT 60.357 61.111 23.63 8.84 39.78 4.40
3060 4063 2.048597 TGACCGACACGTGGCATC 60.049 61.111 23.63 18.45 0.00 3.91
3061 4064 2.813908 GACCGACACGTGGCATCC 60.814 66.667 23.63 5.09 0.00 3.51
3062 4065 3.583276 GACCGACACGTGGCATCCA 62.583 63.158 23.63 0.00 0.00 3.41
3072 4075 2.367529 TGGCATCCACTGTAACGGA 58.632 52.632 0.00 0.00 35.27 4.69
3073 4076 0.687920 TGGCATCCACTGTAACGGAA 59.312 50.000 0.00 0.00 34.22 4.30
3074 4077 1.084289 GGCATCCACTGTAACGGAAC 58.916 55.000 0.00 0.00 34.22 3.62
3090 4093 2.114825 GGAACGTCGTTAAGCTATCGG 58.885 52.381 11.26 0.00 0.00 4.18
3091 4094 1.516042 GAACGTCGTTAAGCTATCGGC 59.484 52.381 11.26 0.00 42.19 5.54
3100 4103 4.657952 GCTATCGGCTGGGGTTTT 57.342 55.556 0.00 0.00 38.06 2.43
3101 4104 2.106844 GCTATCGGCTGGGGTTTTG 58.893 57.895 0.00 0.00 38.06 2.44
3102 4105 1.384222 GCTATCGGCTGGGGTTTTGG 61.384 60.000 0.00 0.00 38.06 3.28
3103 4106 0.254747 CTATCGGCTGGGGTTTTGGA 59.745 55.000 0.00 0.00 0.00 3.53
3104 4107 0.923358 TATCGGCTGGGGTTTTGGAT 59.077 50.000 0.00 0.00 0.00 3.41
3105 4108 0.395724 ATCGGCTGGGGTTTTGGATC 60.396 55.000 0.00 0.00 0.00 3.36
3106 4109 2.052104 CGGCTGGGGTTTTGGATCC 61.052 63.158 4.20 4.20 0.00 3.36
3107 4110 2.052104 GGCTGGGGTTTTGGATCCG 61.052 63.158 7.39 0.00 0.00 4.18
3108 4111 1.001393 GCTGGGGTTTTGGATCCGA 60.001 57.895 7.39 1.27 0.00 4.55
3109 4112 0.395724 GCTGGGGTTTTGGATCCGAT 60.396 55.000 7.39 0.00 0.00 4.18
3110 4113 1.133915 GCTGGGGTTTTGGATCCGATA 60.134 52.381 7.39 0.00 0.00 2.92
3111 4114 2.685522 GCTGGGGTTTTGGATCCGATAA 60.686 50.000 7.39 0.00 0.00 1.75
3112 4115 2.949644 CTGGGGTTTTGGATCCGATAAC 59.050 50.000 7.39 10.62 0.00 1.89
3113 4116 2.304092 GGGGTTTTGGATCCGATAACC 58.696 52.381 24.06 24.06 37.98 2.85
3115 4118 1.944709 GGTTTTGGATCCGATAACCCG 59.055 52.381 22.63 0.00 33.72 5.28
3116 4119 2.635714 GTTTTGGATCCGATAACCCGT 58.364 47.619 7.39 0.00 0.00 5.28
3117 4120 3.011818 GTTTTGGATCCGATAACCCGTT 58.988 45.455 7.39 0.00 0.00 4.44
3118 4121 4.190772 GTTTTGGATCCGATAACCCGTTA 58.809 43.478 7.39 0.00 0.00 3.18
3119 4122 4.484537 TTTGGATCCGATAACCCGTTAA 57.515 40.909 7.39 0.00 0.00 2.01
3120 4123 3.457610 TGGATCCGATAACCCGTTAAC 57.542 47.619 7.39 0.00 0.00 2.01
3121 4124 2.765135 TGGATCCGATAACCCGTTAACA 59.235 45.455 7.39 0.00 0.00 2.41
3122 4125 3.197333 TGGATCCGATAACCCGTTAACAA 59.803 43.478 7.39 0.00 0.00 2.83
3123 4126 3.557185 GGATCCGATAACCCGTTAACAAC 59.443 47.826 6.39 0.00 0.00 3.32
3124 4127 2.971307 TCCGATAACCCGTTAACAACC 58.029 47.619 6.39 0.00 0.00 3.77
3125 4128 2.009051 CCGATAACCCGTTAACAACCC 58.991 52.381 6.39 0.00 0.00 4.11
3126 4129 2.009051 CGATAACCCGTTAACAACCCC 58.991 52.381 6.39 0.00 0.00 4.95
3127 4130 2.009051 GATAACCCGTTAACAACCCCG 58.991 52.381 6.39 0.00 0.00 5.73
3128 4131 1.051812 TAACCCGTTAACAACCCCGA 58.948 50.000 6.39 0.00 0.00 5.14
3129 4132 0.534877 AACCCGTTAACAACCCCGAC 60.535 55.000 6.39 0.00 0.00 4.79
3130 4133 1.672030 CCCGTTAACAACCCCGACC 60.672 63.158 6.39 0.00 0.00 4.79
3131 4134 1.071128 CCGTTAACAACCCCGACCA 59.929 57.895 6.39 0.00 0.00 4.02
3132 4135 0.534652 CCGTTAACAACCCCGACCAA 60.535 55.000 6.39 0.00 0.00 3.67
3133 4136 1.525941 CGTTAACAACCCCGACCAAT 58.474 50.000 6.39 0.00 0.00 3.16
3134 4137 1.198178 CGTTAACAACCCCGACCAATG 59.802 52.381 6.39 0.00 0.00 2.82
3135 4138 1.542472 GTTAACAACCCCGACCAATGG 59.458 52.381 0.00 0.00 0.00 3.16
3142 4145 3.298320 CCCGACCAATGGGGATTTT 57.702 52.632 3.55 0.00 46.95 1.82
3143 4146 1.111277 CCCGACCAATGGGGATTTTC 58.889 55.000 3.55 0.00 46.95 2.29
3144 4147 1.111277 CCGACCAATGGGGATTTTCC 58.889 55.000 3.55 0.00 41.15 3.13
3145 4148 1.618345 CCGACCAATGGGGATTTTCCA 60.618 52.381 3.55 0.00 38.64 3.53
3146 4149 1.476488 CGACCAATGGGGATTTTCCAC 59.524 52.381 3.55 0.00 41.45 4.02
3147 4150 1.476488 GACCAATGGGGATTTTCCACG 59.524 52.381 3.55 0.00 45.00 4.94
3148 4151 1.203125 ACCAATGGGGATTTTCCACGT 60.203 47.619 3.55 0.00 45.00 4.49
3149 4152 1.204467 CCAATGGGGATTTTCCACGTG 59.796 52.381 9.08 9.08 45.00 4.49
3150 4153 1.892474 CAATGGGGATTTTCCACGTGT 59.108 47.619 15.65 0.00 45.00 4.49
3151 4154 3.085533 CAATGGGGATTTTCCACGTGTA 58.914 45.455 15.65 0.00 45.00 2.90
3152 4155 2.953284 TGGGGATTTTCCACGTGTAA 57.047 45.000 15.65 1.07 45.00 2.41
3153 4156 3.225177 TGGGGATTTTCCACGTGTAAA 57.775 42.857 15.65 14.28 45.00 2.01
3154 4157 3.563223 TGGGGATTTTCCACGTGTAAAA 58.437 40.909 19.43 19.43 45.00 1.52
3155 4158 4.153411 TGGGGATTTTCCACGTGTAAAAT 58.847 39.130 25.95 25.95 45.00 1.82
3156 4159 4.218852 TGGGGATTTTCCACGTGTAAAATC 59.781 41.667 33.88 33.88 45.00 2.17
3157 4160 4.218852 GGGGATTTTCCACGTGTAAAATCA 59.781 41.667 37.89 16.74 46.62 2.57
3158 4161 5.105513 GGGGATTTTCCACGTGTAAAATCAT 60.106 40.000 37.89 20.35 46.62 2.45
3159 4162 6.033966 GGGATTTTCCACGTGTAAAATCATC 58.966 40.000 37.89 30.08 46.62 2.92
3160 4163 6.349777 GGGATTTTCCACGTGTAAAATCATCA 60.350 38.462 37.89 15.58 46.62 3.07
3161 4164 7.257722 GGATTTTCCACGTGTAAAATCATCAT 58.742 34.615 37.89 19.23 46.62 2.45
3162 4165 7.759433 GGATTTTCCACGTGTAAAATCATCATT 59.241 33.333 37.89 18.67 46.62 2.57
3163 4166 7.865875 TTTTCCACGTGTAAAATCATCATTG 57.134 32.000 14.20 0.00 0.00 2.82
3164 4167 5.559427 TCCACGTGTAAAATCATCATTGG 57.441 39.130 15.65 0.00 0.00 3.16
3165 4168 4.104776 CCACGTGTAAAATCATCATTGGC 58.895 43.478 15.65 0.00 0.00 4.52
3166 4169 4.142403 CCACGTGTAAAATCATCATTGGCT 60.142 41.667 15.65 0.00 0.00 4.75
3167 4170 4.794762 CACGTGTAAAATCATCATTGGCTG 59.205 41.667 7.58 0.00 0.00 4.85
3168 4171 4.142403 ACGTGTAAAATCATCATTGGCTGG 60.142 41.667 0.00 0.00 0.00 4.85
3169 4172 4.096231 CGTGTAAAATCATCATTGGCTGGA 59.904 41.667 0.00 0.00 0.00 3.86
3170 4173 5.585390 GTGTAAAATCATCATTGGCTGGAG 58.415 41.667 0.00 0.00 0.00 3.86
3171 4174 4.646040 TGTAAAATCATCATTGGCTGGAGG 59.354 41.667 0.00 0.00 0.00 4.30
3172 4175 3.675348 AAATCATCATTGGCTGGAGGA 57.325 42.857 0.00 0.00 0.00 3.71
3173 4176 3.675348 AATCATCATTGGCTGGAGGAA 57.325 42.857 0.00 0.00 0.00 3.36
3174 4177 3.675348 ATCATCATTGGCTGGAGGAAA 57.325 42.857 0.00 0.00 0.00 3.13
3175 4178 2.726821 TCATCATTGGCTGGAGGAAAC 58.273 47.619 0.00 0.00 0.00 2.78
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
16 17 3.253188 GGCGGCATGCTATTTTAAGATGA 59.747 43.478 18.92 0.00 45.43 2.92
19 20 2.618241 CTGGCGGCATGCTATTTTAAGA 59.382 45.455 18.92 0.00 45.43 2.10
22 23 1.317613 CCTGGCGGCATGCTATTTTA 58.682 50.000 18.92 0.00 45.43 1.52
26 27 0.036010 GATACCTGGCGGCATGCTAT 60.036 55.000 18.92 10.15 45.43 2.97
27 28 1.371183 GATACCTGGCGGCATGCTA 59.629 57.895 18.92 5.63 45.43 3.49
29 30 1.601759 ATGATACCTGGCGGCATGC 60.602 57.895 13.85 9.90 45.38 4.06
63 64 0.887836 ATGGCTACCGCATGCATGAG 60.888 55.000 30.64 26.18 38.10 2.90
70 71 1.340017 ACAAGAACATGGCTACCGCAT 60.340 47.619 0.00 0.00 38.10 4.73
93 96 4.998671 TTTCATTTGGTGAAGTGCTTCA 57.001 36.364 10.26 10.26 46.85 3.02
105 108 6.164876 TGGTGCAATACTCAATTTCATTTGG 58.835 36.000 0.00 0.00 0.00 3.28
108 111 6.594788 ACTGGTGCAATACTCAATTTCATT 57.405 33.333 0.00 0.00 0.00 2.57
112 115 3.119849 GCGACTGGTGCAATACTCAATTT 60.120 43.478 0.00 0.00 0.00 1.82
121 124 0.244450 CATTTGGCGACTGGTGCAAT 59.756 50.000 0.00 0.00 0.00 3.56
122 125 0.821301 TCATTTGGCGACTGGTGCAA 60.821 50.000 0.00 0.00 0.00 4.08
125 128 3.009723 AGTATTCATTTGGCGACTGGTG 58.990 45.455 0.00 0.00 0.00 4.17
126 129 3.350219 AGTATTCATTTGGCGACTGGT 57.650 42.857 0.00 0.00 0.00 4.00
128 131 4.944962 TCAAGTATTCATTTGGCGACTG 57.055 40.909 0.00 0.00 0.00 3.51
143 146 5.186992 TCAGGTTCCATCGAATCTTCAAGTA 59.813 40.000 0.00 0.00 37.35 2.24
152 155 4.848357 AGAATGTTCAGGTTCCATCGAAT 58.152 39.130 0.00 0.00 0.00 3.34
174 177 6.599244 AGAAGCAATGAGTGGAATTCGATTTA 59.401 34.615 0.00 0.00 0.00 1.40
192 195 4.937201 TCTCACACTACTTCAGAAGCAA 57.063 40.909 10.33 0.00 0.00 3.91
198 201 3.446873 AGGCTCATCTCACACTACTTCAG 59.553 47.826 0.00 0.00 0.00 3.02
199 202 3.435275 AGGCTCATCTCACACTACTTCA 58.565 45.455 0.00 0.00 0.00 3.02
200 203 4.464069 AAGGCTCATCTCACACTACTTC 57.536 45.455 0.00 0.00 0.00 3.01
201 204 4.323104 GGAAAGGCTCATCTCACACTACTT 60.323 45.833 0.00 0.00 0.00 2.24
203 206 3.196685 AGGAAAGGCTCATCTCACACTAC 59.803 47.826 0.00 0.00 0.00 2.73
204 207 3.445008 AGGAAAGGCTCATCTCACACTA 58.555 45.455 0.00 0.00 0.00 2.74
205 208 2.264455 AGGAAAGGCTCATCTCACACT 58.736 47.619 0.00 0.00 0.00 3.55
222 226 3.331889 AGAAGGATGGCTTGAAGAAAGGA 59.668 43.478 0.00 0.00 36.30 3.36
256 261 5.118990 GGCTTACTGCATGACTATGAGAAA 58.881 41.667 0.00 0.00 45.15 2.52
263 268 2.232696 TGTTCGGCTTACTGCATGACTA 59.767 45.455 0.00 0.00 45.15 2.59
264 269 1.001974 TGTTCGGCTTACTGCATGACT 59.998 47.619 0.00 0.00 45.15 3.41
272 277 4.595762 TTTACAGTCTGTTCGGCTTACT 57.404 40.909 11.54 0.00 0.00 2.24
276 281 3.058224 GCAAATTTACAGTCTGTTCGGCT 60.058 43.478 11.54 0.00 0.00 5.52
282 287 4.002906 TCGAGGCAAATTTACAGTCTGT 57.997 40.909 10.99 10.99 0.00 3.41
284 289 6.483640 GGAATATCGAGGCAAATTTACAGTCT 59.516 38.462 0.00 0.00 0.00 3.24
295 300 2.288666 GCACAAGGAATATCGAGGCAA 58.711 47.619 0.00 0.00 0.00 4.52
314 319 4.404654 CAGACTTTTGGGCGCGGC 62.405 66.667 26.39 26.39 0.00 6.53
320 325 7.038659 CACTAGTAGAATCTCAGACTTTTGGG 58.961 42.308 3.59 0.00 0.00 4.12
409 414 1.272769 GCTACGGTATCATGGAGGGAC 59.727 57.143 0.00 0.00 0.00 4.46
421 426 2.099263 GCTCATCAAGAGTGCTACGGTA 59.901 50.000 0.00 0.00 46.47 4.02
422 427 1.134965 GCTCATCAAGAGTGCTACGGT 60.135 52.381 0.00 0.00 46.47 4.83
424 429 2.458951 GAGCTCATCAAGAGTGCTACG 58.541 52.381 9.40 0.00 46.47 3.51
476 481 4.162509 CCACTGTCCAAAAACCCCTAAAAA 59.837 41.667 0.00 0.00 0.00 1.94
477 482 3.707102 CCACTGTCCAAAAACCCCTAAAA 59.293 43.478 0.00 0.00 0.00 1.52
481 486 0.930726 TCCACTGTCCAAAAACCCCT 59.069 50.000 0.00 0.00 0.00 4.79
482 487 2.009681 ATCCACTGTCCAAAAACCCC 57.990 50.000 0.00 0.00 0.00 4.95
483 488 4.415881 AAAATCCACTGTCCAAAAACCC 57.584 40.909 0.00 0.00 0.00 4.11
529 534 2.031157 ACAGCTACAAACGTCCAATTGC 60.031 45.455 0.00 0.00 0.00 3.56
530 535 3.249799 TGACAGCTACAAACGTCCAATTG 59.750 43.478 0.00 0.00 0.00 2.32
531 536 3.250040 GTGACAGCTACAAACGTCCAATT 59.750 43.478 0.00 0.00 0.00 2.32
532 537 2.806244 GTGACAGCTACAAACGTCCAAT 59.194 45.455 0.00 0.00 0.00 3.16
533 538 2.159014 AGTGACAGCTACAAACGTCCAA 60.159 45.455 0.00 0.00 0.00 3.53
534 539 1.411246 AGTGACAGCTACAAACGTCCA 59.589 47.619 0.00 0.00 0.00 4.02
535 540 1.792949 CAGTGACAGCTACAAACGTCC 59.207 52.381 0.00 0.00 0.00 4.79
536 541 1.792949 CCAGTGACAGCTACAAACGTC 59.207 52.381 0.00 0.00 0.00 4.34
537 542 1.411246 TCCAGTGACAGCTACAAACGT 59.589 47.619 0.00 0.00 0.00 3.99
538 543 2.061773 CTCCAGTGACAGCTACAAACG 58.938 52.381 0.00 0.00 0.00 3.60
539 544 3.113260 ACTCCAGTGACAGCTACAAAC 57.887 47.619 0.00 0.00 0.00 2.93
540 545 4.948341 TTACTCCAGTGACAGCTACAAA 57.052 40.909 0.00 0.00 0.00 2.83
541 546 4.948341 TTTACTCCAGTGACAGCTACAA 57.052 40.909 0.00 0.00 0.00 2.41
542 547 5.394224 GCTATTTACTCCAGTGACAGCTACA 60.394 44.000 0.00 0.00 0.00 2.74
543 548 5.044558 GCTATTTACTCCAGTGACAGCTAC 58.955 45.833 0.00 0.00 0.00 3.58
544 549 4.709886 TGCTATTTACTCCAGTGACAGCTA 59.290 41.667 0.00 0.00 0.00 3.32
545 550 3.515502 TGCTATTTACTCCAGTGACAGCT 59.484 43.478 0.00 0.00 0.00 4.24
546 551 3.861840 TGCTATTTACTCCAGTGACAGC 58.138 45.455 0.00 0.00 0.00 4.40
547 552 8.391106 GTTTTATGCTATTTACTCCAGTGACAG 58.609 37.037 0.00 0.00 0.00 3.51
548 553 8.100791 AGTTTTATGCTATTTACTCCAGTGACA 58.899 33.333 0.00 0.00 0.00 3.58
549 554 8.494016 AGTTTTATGCTATTTACTCCAGTGAC 57.506 34.615 0.00 0.00 0.00 3.67
550 555 9.595823 GTAGTTTTATGCTATTTACTCCAGTGA 57.404 33.333 0.00 0.00 0.00 3.41
665 672 1.005394 CTAGTCACCGCGGGTTTGT 60.005 57.895 31.76 12.31 31.02 2.83
801 825 2.356432 GGTGGGTGGGGTATTTACTCAC 60.356 54.545 0.00 0.00 43.36 3.51
802 826 1.917568 GGTGGGTGGGGTATTTACTCA 59.082 52.381 0.00 0.00 0.00 3.41
803 827 1.213678 GGGTGGGTGGGGTATTTACTC 59.786 57.143 0.00 0.00 0.00 2.59
804 828 1.203648 AGGGTGGGTGGGGTATTTACT 60.204 52.381 0.00 0.00 0.00 2.24
870 942 0.397941 CAAAGCAGGGGAGTGTGAGA 59.602 55.000 0.00 0.00 0.00 3.27
874 946 1.073897 GAGCAAAGCAGGGGAGTGT 59.926 57.895 0.00 0.00 0.00 3.55
944 1082 1.229209 TCCTCGTTCCAGGAAGGCT 60.229 57.895 16.00 0.00 39.83 4.58
1075 1258 7.568199 ACAACAACACTAACTAAGCAAGATT 57.432 32.000 0.00 0.00 0.00 2.40
1288 2030 2.681848 CAAGCTCAAGTTGGCCATAGAG 59.318 50.000 6.09 12.79 0.00 2.43
1354 2134 6.398234 TGTTATAGTGCCTTCAAAAGCAAA 57.602 33.333 0.00 0.00 41.48 3.68
1395 2180 1.898863 ATCTAACCTGGACTGGGCAT 58.101 50.000 0.00 0.00 0.00 4.40
1425 2230 4.842292 GCATCATGTGAGGCGAGA 57.158 55.556 3.78 0.00 42.08 4.04
1511 2342 9.964354 TGCCATGAAGATATGCTAAGTTATTAT 57.036 29.630 0.00 0.00 0.00 1.28
1643 2586 5.684704 TGGACAAACATCTCTGAAGAACTT 58.315 37.500 0.00 0.00 34.49 2.66
1727 2670 0.032615 AACCTTGGCCAACTCCAACA 60.033 50.000 16.05 0.00 40.92 3.33
1729 2672 2.175931 TCTTAACCTTGGCCAACTCCAA 59.824 45.455 16.05 5.89 43.36 3.53
1730 2673 1.777878 TCTTAACCTTGGCCAACTCCA 59.222 47.619 16.05 0.00 0.00 3.86
2089 3056 2.096019 GCTCAGCAACAACTAGCTCAAC 60.096 50.000 0.00 0.00 39.50 3.18
2115 3082 3.554934 CTTGCTGCCATACCCATCTTTA 58.445 45.455 0.00 0.00 0.00 1.85
2239 3212 8.463930 AAATGTACACCCATATAATCACTTGG 57.536 34.615 0.00 0.00 0.00 3.61
2333 3307 8.239314 ACAACATACTTGAGAACATAGCAAATG 58.761 33.333 0.00 0.00 0.00 2.32
2348 3322 7.864108 TTGGAGATCCATTACAACATACTTG 57.136 36.000 1.61 0.00 46.97 3.16
2479 3471 7.686434 AGTAGGCCTAAGTAAGTTTCATTTGA 58.314 34.615 15.83 0.00 0.00 2.69
2531 3525 1.341679 GGTGGGGAGGGGTTTATGTTC 60.342 57.143 0.00 0.00 0.00 3.18
2534 3528 1.218439 TGGGTGGGGAGGGGTTTATG 61.218 60.000 0.00 0.00 0.00 1.90
2628 3631 1.484038 CTCTCCCTCCTCCTCTGTTG 58.516 60.000 0.00 0.00 0.00 3.33
2669 3672 0.683973 CTCCTCCTCTGTTGTGCTGT 59.316 55.000 0.00 0.00 0.00 4.40
2841 3844 9.344884 GTGACAAACACGTATCATCACGAAAGT 62.345 40.741 2.26 0.00 44.69 2.66
2842 3845 5.107645 TGACAAACACGTATCATCACGAAAG 60.108 40.000 2.26 0.00 44.69 2.62
2843 3846 4.745620 TGACAAACACGTATCATCACGAAA 59.254 37.500 2.26 0.00 44.69 3.46
2844 3847 4.149221 GTGACAAACACGTATCATCACGAA 59.851 41.667 2.26 0.00 44.69 3.85
2845 3848 3.671459 GTGACAAACACGTATCATCACGA 59.329 43.478 2.26 0.00 44.69 4.35
2858 3861 1.137282 TGCGACCTACTGTGACAAACA 59.863 47.619 0.00 0.00 37.22 2.83
2859 3862 1.860676 TGCGACCTACTGTGACAAAC 58.139 50.000 0.00 0.00 0.00 2.93
2860 3863 2.831685 ATGCGACCTACTGTGACAAA 57.168 45.000 0.00 0.00 0.00 2.83
2861 3864 2.831685 AATGCGACCTACTGTGACAA 57.168 45.000 0.00 0.00 0.00 3.18
2862 3865 2.831685 AAATGCGACCTACTGTGACA 57.168 45.000 0.00 0.00 0.00 3.58
2880 3883 5.718724 TGGATGTACATGCATGACAAAAA 57.281 34.783 32.75 16.53 34.14 1.94
2881 3884 5.918426 ATGGATGTACATGCATGACAAAA 57.082 34.783 33.87 18.90 46.05 2.44
2889 3892 2.977772 TCGTCATGGATGTACATGCA 57.022 45.000 29.03 29.03 46.02 3.96
2890 3893 4.818534 AAATCGTCATGGATGTACATGC 57.181 40.909 19.53 19.53 46.02 4.06
2892 3895 7.714813 TGTCATAAAATCGTCATGGATGTACAT 59.285 33.333 8.43 8.43 0.00 2.29
2893 3896 7.044798 TGTCATAAAATCGTCATGGATGTACA 58.955 34.615 0.00 0.00 0.00 2.90
2894 3897 7.438160 TCTGTCATAAAATCGTCATGGATGTAC 59.562 37.037 0.00 0.00 0.00 2.90
2895 3898 7.496747 TCTGTCATAAAATCGTCATGGATGTA 58.503 34.615 0.00 0.00 0.00 2.29
2896 3899 6.348498 TCTGTCATAAAATCGTCATGGATGT 58.652 36.000 0.00 0.00 0.00 3.06
2897 3900 6.849588 TCTGTCATAAAATCGTCATGGATG 57.150 37.500 0.00 0.00 0.00 3.51
2898 3901 7.716560 TGATTCTGTCATAAAATCGTCATGGAT 59.283 33.333 0.00 0.00 33.13 3.41
2899 3902 7.047271 TGATTCTGTCATAAAATCGTCATGGA 58.953 34.615 0.00 0.00 33.13 3.41
2900 3903 7.250445 TGATTCTGTCATAAAATCGTCATGG 57.750 36.000 0.00 0.00 33.13 3.66
2901 3904 8.606602 TCTTGATTCTGTCATAAAATCGTCATG 58.393 33.333 0.00 0.00 36.54 3.07
2902 3905 8.722480 TCTTGATTCTGTCATAAAATCGTCAT 57.278 30.769 0.00 0.00 36.54 3.06
2903 3906 8.722480 ATCTTGATTCTGTCATAAAATCGTCA 57.278 30.769 0.00 0.00 36.54 4.35
2905 3908 9.823647 ACTATCTTGATTCTGTCATAAAATCGT 57.176 29.630 0.00 0.00 36.54 3.73
2912 3915 9.593565 AGGTATGACTATCTTGATTCTGTCATA 57.406 33.333 18.29 18.29 42.64 2.15
2913 3916 8.366401 CAGGTATGACTATCTTGATTCTGTCAT 58.634 37.037 19.47 19.47 44.19 3.06
2914 3917 7.343057 ACAGGTATGACTATCTTGATTCTGTCA 59.657 37.037 12.36 12.36 38.52 3.58
2915 3918 7.651304 CACAGGTATGACTATCTTGATTCTGTC 59.349 40.741 0.00 0.00 0.00 3.51
2916 3919 7.343057 TCACAGGTATGACTATCTTGATTCTGT 59.657 37.037 0.00 0.00 0.00 3.41
2917 3920 7.720442 TCACAGGTATGACTATCTTGATTCTG 58.280 38.462 0.00 0.00 0.00 3.02
2918 3921 7.904558 TCACAGGTATGACTATCTTGATTCT 57.095 36.000 0.00 0.00 0.00 2.40
2919 3922 8.147058 ACATCACAGGTATGACTATCTTGATTC 58.853 37.037 0.00 0.00 0.00 2.52
2920 3923 8.027524 ACATCACAGGTATGACTATCTTGATT 57.972 34.615 0.00 0.00 0.00 2.57
2921 3924 7.522889 CGACATCACAGGTATGACTATCTTGAT 60.523 40.741 0.00 0.00 0.00 2.57
2922 3925 6.238759 CGACATCACAGGTATGACTATCTTGA 60.239 42.308 0.00 0.00 0.00 3.02
2923 3926 5.917447 CGACATCACAGGTATGACTATCTTG 59.083 44.000 0.00 0.00 0.00 3.02
2924 3927 5.594725 ACGACATCACAGGTATGACTATCTT 59.405 40.000 0.00 0.00 0.00 2.40
2925 3928 5.133941 ACGACATCACAGGTATGACTATCT 58.866 41.667 0.00 0.00 0.00 1.98
2926 3929 5.440234 ACGACATCACAGGTATGACTATC 57.560 43.478 0.00 0.00 0.00 2.08
2927 3930 6.296803 TCTACGACATCACAGGTATGACTAT 58.703 40.000 0.00 0.00 0.00 2.12
2928 3931 5.677567 TCTACGACATCACAGGTATGACTA 58.322 41.667 0.00 0.00 0.00 2.59
2929 3932 4.524053 TCTACGACATCACAGGTATGACT 58.476 43.478 0.00 0.00 0.00 3.41
2930 3933 4.895224 TCTACGACATCACAGGTATGAC 57.105 45.455 0.00 0.00 0.00 3.06
2931 3934 4.948004 ACTTCTACGACATCACAGGTATGA 59.052 41.667 0.00 0.00 0.00 2.15
2932 3935 5.037385 CACTTCTACGACATCACAGGTATG 58.963 45.833 0.00 0.00 0.00 2.39
2933 3936 4.705507 ACACTTCTACGACATCACAGGTAT 59.294 41.667 0.00 0.00 0.00 2.73
2934 3937 4.077108 ACACTTCTACGACATCACAGGTA 58.923 43.478 0.00 0.00 0.00 3.08
2935 3938 2.891580 ACACTTCTACGACATCACAGGT 59.108 45.455 0.00 0.00 0.00 4.00
2936 3939 3.577649 ACACTTCTACGACATCACAGG 57.422 47.619 0.00 0.00 0.00 4.00
2937 3940 3.921021 GGAACACTTCTACGACATCACAG 59.079 47.826 0.00 0.00 0.00 3.66
2938 3941 3.319689 TGGAACACTTCTACGACATCACA 59.680 43.478 0.00 0.00 0.00 3.58
2939 3942 3.909430 TGGAACACTTCTACGACATCAC 58.091 45.455 0.00 0.00 0.00 3.06
2957 3960 9.418839 TGATGATAATTTTGGTAATGTCATGGA 57.581 29.630 0.00 0.00 0.00 3.41
2958 3961 9.467258 GTGATGATAATTTTGGTAATGTCATGG 57.533 33.333 0.00 0.00 0.00 3.66
2959 3962 9.172820 CGTGATGATAATTTTGGTAATGTCATG 57.827 33.333 0.00 0.00 0.00 3.07
2960 3963 8.352201 CCGTGATGATAATTTTGGTAATGTCAT 58.648 33.333 0.00 0.00 0.00 3.06
2961 3964 7.554476 TCCGTGATGATAATTTTGGTAATGTCA 59.446 33.333 0.00 0.00 0.00 3.58
2962 3965 7.925993 TCCGTGATGATAATTTTGGTAATGTC 58.074 34.615 0.00 0.00 0.00 3.06
2963 3966 7.873719 TCCGTGATGATAATTTTGGTAATGT 57.126 32.000 0.00 0.00 0.00 2.71
2964 3967 8.405531 ACTTCCGTGATGATAATTTTGGTAATG 58.594 33.333 0.00 0.00 0.00 1.90
2965 3968 8.405531 CACTTCCGTGATGATAATTTTGGTAAT 58.594 33.333 0.00 0.00 43.97 1.89
2966 3969 7.392113 ACACTTCCGTGATGATAATTTTGGTAA 59.608 33.333 0.00 0.00 43.97 2.85
2967 3970 6.882140 ACACTTCCGTGATGATAATTTTGGTA 59.118 34.615 0.00 0.00 43.97 3.25
2968 3971 5.710099 ACACTTCCGTGATGATAATTTTGGT 59.290 36.000 0.00 0.00 43.97 3.67
2969 3972 6.194796 ACACTTCCGTGATGATAATTTTGG 57.805 37.500 0.00 0.00 43.97 3.28
2970 3973 6.128035 TGGACACTTCCGTGATGATAATTTTG 60.128 38.462 0.00 0.00 46.37 2.44
2971 3974 5.943416 TGGACACTTCCGTGATGATAATTTT 59.057 36.000 0.00 0.00 46.37 1.82
2972 3975 5.354234 GTGGACACTTCCGTGATGATAATTT 59.646 40.000 0.00 0.00 46.37 1.82
2973 3976 4.876107 GTGGACACTTCCGTGATGATAATT 59.124 41.667 0.00 0.00 46.37 1.40
2974 3977 4.162320 AGTGGACACTTCCGTGATGATAAT 59.838 41.667 0.00 0.00 46.37 1.28
2975 3978 3.513912 AGTGGACACTTCCGTGATGATAA 59.486 43.478 0.00 0.00 46.37 1.75
2976 3979 3.096852 AGTGGACACTTCCGTGATGATA 58.903 45.455 0.00 0.00 46.37 2.15
2977 3980 1.902508 AGTGGACACTTCCGTGATGAT 59.097 47.619 0.00 0.00 46.37 2.45
2978 3981 1.338107 AGTGGACACTTCCGTGATGA 58.662 50.000 0.00 0.00 46.37 2.92
2979 3982 3.914984 AGTGGACACTTCCGTGATG 57.085 52.632 0.00 0.00 46.37 3.07
2988 3991 1.338107 TCGTCATGGAAGTGGACACT 58.662 50.000 0.00 0.00 44.94 3.55
2989 3992 2.386661 ATCGTCATGGAAGTGGACAC 57.613 50.000 0.00 0.00 0.00 3.67
2990 3993 4.545208 TTTATCGTCATGGAAGTGGACA 57.455 40.909 0.00 0.00 0.00 4.02
2991 3994 5.730568 GCAATTTATCGTCATGGAAGTGGAC 60.731 44.000 0.00 0.00 0.00 4.02
2992 3995 4.335315 GCAATTTATCGTCATGGAAGTGGA 59.665 41.667 0.00 0.00 0.00 4.02
2993 3996 4.601019 GCAATTTATCGTCATGGAAGTGG 58.399 43.478 0.00 0.00 0.00 4.00
2994 3997 4.274069 CGCAATTTATCGTCATGGAAGTG 58.726 43.478 0.00 0.00 0.00 3.16
2995 3998 3.242739 GCGCAATTTATCGTCATGGAAGT 60.243 43.478 0.30 0.00 0.00 3.01
2996 3999 3.242706 TGCGCAATTTATCGTCATGGAAG 60.243 43.478 8.16 0.00 0.00 3.46
2997 4000 2.680339 TGCGCAATTTATCGTCATGGAA 59.320 40.909 8.16 0.00 0.00 3.53
2998 4001 2.284190 TGCGCAATTTATCGTCATGGA 58.716 42.857 8.16 0.00 0.00 3.41
2999 4002 2.753989 TGCGCAATTTATCGTCATGG 57.246 45.000 8.16 0.00 0.00 3.66
3000 4003 3.660813 GTGATGCGCAATTTATCGTCATG 59.339 43.478 17.11 0.00 0.00 3.07
3001 4004 3.312146 TGTGATGCGCAATTTATCGTCAT 59.688 39.130 17.11 0.00 0.00 3.06
3002 4005 2.675348 TGTGATGCGCAATTTATCGTCA 59.325 40.909 17.11 8.28 0.00 4.35
3003 4006 3.001228 TCTGTGATGCGCAATTTATCGTC 59.999 43.478 17.11 5.10 0.00 4.20
3004 4007 2.935849 TCTGTGATGCGCAATTTATCGT 59.064 40.909 17.11 0.00 0.00 3.73
3005 4008 3.590720 TCTGTGATGCGCAATTTATCG 57.409 42.857 17.11 0.00 0.00 2.92
3006 4009 4.731961 CACTTCTGTGATGCGCAATTTATC 59.268 41.667 17.11 7.75 46.55 1.75
3007 4010 4.665212 CACTTCTGTGATGCGCAATTTAT 58.335 39.130 17.11 0.00 46.55 1.40
3008 4011 3.670359 GCACTTCTGTGATGCGCAATTTA 60.670 43.478 17.11 0.15 46.55 1.40
3009 4012 2.923605 GCACTTCTGTGATGCGCAATTT 60.924 45.455 17.11 0.00 46.55 1.82
3010 4013 1.401931 GCACTTCTGTGATGCGCAATT 60.402 47.619 17.11 0.00 46.55 2.32
3011 4014 0.169672 GCACTTCTGTGATGCGCAAT 59.830 50.000 17.11 2.42 46.55 3.56
3012 4015 0.886043 AGCACTTCTGTGATGCGCAA 60.886 50.000 17.11 0.00 46.55 4.85
3013 4016 0.886043 AAGCACTTCTGTGATGCGCA 60.886 50.000 14.96 14.96 46.55 6.09
3014 4017 0.239347 AAAGCACTTCTGTGATGCGC 59.761 50.000 0.00 0.00 46.55 6.09
3015 4018 1.463034 CGAAAGCACTTCTGTGATGCG 60.463 52.381 0.00 0.00 46.55 4.73
3016 4019 1.532868 ACGAAAGCACTTCTGTGATGC 59.467 47.619 0.00 0.00 46.55 3.91
3017 4020 2.802247 TGACGAAAGCACTTCTGTGATG 59.198 45.455 0.00 0.00 46.55 3.07
3018 4021 3.111853 TGACGAAAGCACTTCTGTGAT 57.888 42.857 0.00 0.00 46.55 3.06
3019 4022 2.595124 TGACGAAAGCACTTCTGTGA 57.405 45.000 0.00 0.00 46.55 3.58
3020 4023 2.032549 CCTTGACGAAAGCACTTCTGTG 60.033 50.000 0.00 0.00 46.37 3.66
3021 4024 2.213499 CCTTGACGAAAGCACTTCTGT 58.787 47.619 0.00 0.00 34.24 3.41
3022 4025 1.532868 CCCTTGACGAAAGCACTTCTG 59.467 52.381 0.00 0.00 34.24 3.02
3023 4026 1.141053 ACCCTTGACGAAAGCACTTCT 59.859 47.619 0.00 0.00 34.24 2.85
3024 4027 1.264288 CACCCTTGACGAAAGCACTTC 59.736 52.381 0.00 0.00 34.24 3.01
3025 4028 1.134220 TCACCCTTGACGAAAGCACTT 60.134 47.619 0.00 0.00 34.24 3.16
3026 4029 0.468226 TCACCCTTGACGAAAGCACT 59.532 50.000 0.00 0.00 34.24 4.40
3027 4030 0.586802 GTCACCCTTGACGAAAGCAC 59.413 55.000 0.00 0.00 42.86 4.40
3028 4031 3.000815 GTCACCCTTGACGAAAGCA 57.999 52.632 0.00 0.00 42.86 3.91
3036 4039 2.129146 ACGTGTCGGTCACCCTTGA 61.129 57.895 0.00 0.00 43.51 3.02
3037 4040 1.954146 CACGTGTCGGTCACCCTTG 60.954 63.158 7.58 0.00 43.51 3.61
3038 4041 2.420043 CACGTGTCGGTCACCCTT 59.580 61.111 7.58 0.00 43.51 3.95
3039 4042 3.612681 CCACGTGTCGGTCACCCT 61.613 66.667 15.65 0.00 43.51 4.34
3041 4044 3.876589 ATGCCACGTGTCGGTCACC 62.877 63.158 15.65 0.00 43.51 4.02
3042 4045 2.357034 ATGCCACGTGTCGGTCAC 60.357 61.111 15.65 0.00 43.03 3.67
3043 4046 2.048597 GATGCCACGTGTCGGTCA 60.049 61.111 15.65 4.62 0.00 4.02
3044 4047 2.813908 GGATGCCACGTGTCGGTC 60.814 66.667 15.65 4.01 0.00 4.79
3045 4048 3.621805 TGGATGCCACGTGTCGGT 61.622 61.111 15.65 0.00 0.00 4.69
3046 4049 3.118454 GTGGATGCCACGTGTCGG 61.118 66.667 15.65 0.00 44.95 4.79
3054 4057 0.687920 TTCCGTTACAGTGGATGCCA 59.312 50.000 0.00 0.00 33.42 4.92
3055 4058 1.084289 GTTCCGTTACAGTGGATGCC 58.916 55.000 0.00 0.00 33.42 4.40
3056 4059 0.719465 CGTTCCGTTACAGTGGATGC 59.281 55.000 0.00 0.00 33.42 3.91
3057 4060 1.990563 GACGTTCCGTTACAGTGGATG 59.009 52.381 0.00 0.00 41.37 3.51
3058 4061 1.401931 CGACGTTCCGTTACAGTGGAT 60.402 52.381 0.00 0.00 41.37 3.41
3059 4062 0.040157 CGACGTTCCGTTACAGTGGA 60.040 55.000 0.00 0.00 41.37 4.02
3060 4063 0.318107 ACGACGTTCCGTTACAGTGG 60.318 55.000 0.00 0.00 41.37 4.00
3061 4064 3.168628 ACGACGTTCCGTTACAGTG 57.831 52.632 0.00 0.00 41.37 3.66
3068 4071 2.789092 CGATAGCTTAACGACGTTCCGT 60.789 50.000 17.94 3.40 45.10 4.69
3069 4072 1.771848 CGATAGCTTAACGACGTTCCG 59.228 52.381 17.94 10.42 0.00 4.30
3070 4073 2.114825 CCGATAGCTTAACGACGTTCC 58.885 52.381 17.94 7.15 0.00 3.62
3071 4074 1.516042 GCCGATAGCTTAACGACGTTC 59.484 52.381 17.94 2.93 38.99 3.95
3072 4075 1.553308 GCCGATAGCTTAACGACGTT 58.447 50.000 18.47 18.47 38.99 3.99
3073 4076 3.247033 GCCGATAGCTTAACGACGT 57.753 52.632 0.00 0.00 38.99 4.34
3083 4086 1.384222 CCAAAACCCCAGCCGATAGC 61.384 60.000 0.00 0.00 44.25 2.97
3084 4087 0.254747 TCCAAAACCCCAGCCGATAG 59.745 55.000 0.00 0.00 0.00 2.08
3085 4088 0.923358 ATCCAAAACCCCAGCCGATA 59.077 50.000 0.00 0.00 0.00 2.92
3086 4089 0.395724 GATCCAAAACCCCAGCCGAT 60.396 55.000 0.00 0.00 0.00 4.18
3087 4090 1.001393 GATCCAAAACCCCAGCCGA 60.001 57.895 0.00 0.00 0.00 5.54
3088 4091 2.052104 GGATCCAAAACCCCAGCCG 61.052 63.158 6.95 0.00 0.00 5.52
3089 4092 2.052104 CGGATCCAAAACCCCAGCC 61.052 63.158 13.41 0.00 0.00 4.85
3090 4093 0.395724 ATCGGATCCAAAACCCCAGC 60.396 55.000 13.41 0.00 0.00 4.85
3091 4094 2.949644 GTTATCGGATCCAAAACCCCAG 59.050 50.000 13.41 0.00 0.00 4.45
3092 4095 2.357361 GGTTATCGGATCCAAAACCCCA 60.357 50.000 21.41 0.00 34.75 4.96
3093 4096 2.304092 GGTTATCGGATCCAAAACCCC 58.696 52.381 21.41 7.78 34.75 4.95
3095 4098 1.944709 CGGGTTATCGGATCCAAAACC 59.055 52.381 22.91 22.91 39.09 3.27
3096 4099 2.635714 ACGGGTTATCGGATCCAAAAC 58.364 47.619 13.41 11.86 0.00 2.43
3097 4100 3.353370 AACGGGTTATCGGATCCAAAA 57.647 42.857 13.41 0.00 0.00 2.44
3098 4101 4.190772 GTTAACGGGTTATCGGATCCAAA 58.809 43.478 13.41 0.00 0.00 3.28
3099 4102 3.197333 TGTTAACGGGTTATCGGATCCAA 59.803 43.478 13.41 0.00 0.00 3.53
3100 4103 2.765135 TGTTAACGGGTTATCGGATCCA 59.235 45.455 13.41 0.00 0.00 3.41
3101 4104 3.457610 TGTTAACGGGTTATCGGATCC 57.542 47.619 0.00 0.00 0.00 3.36
3102 4105 3.557185 GGTTGTTAACGGGTTATCGGATC 59.443 47.826 0.26 0.00 0.00 3.36
3103 4106 3.534554 GGTTGTTAACGGGTTATCGGAT 58.465 45.455 0.26 0.00 0.00 4.18
3104 4107 2.354604 GGGTTGTTAACGGGTTATCGGA 60.355 50.000 0.26 0.00 0.00 4.55
3105 4108 2.009051 GGGTTGTTAACGGGTTATCGG 58.991 52.381 0.26 0.00 0.00 4.18
3106 4109 2.009051 GGGGTTGTTAACGGGTTATCG 58.991 52.381 0.26 0.00 0.00 2.92
3107 4110 2.009051 CGGGGTTGTTAACGGGTTATC 58.991 52.381 0.26 0.00 0.00 1.75
3108 4111 1.627834 TCGGGGTTGTTAACGGGTTAT 59.372 47.619 0.26 0.00 0.00 1.89
3109 4112 1.051812 TCGGGGTTGTTAACGGGTTA 58.948 50.000 0.26 0.00 0.00 2.85
3110 4113 0.534877 GTCGGGGTTGTTAACGGGTT 60.535 55.000 0.26 0.00 0.00 4.11
3111 4114 1.071299 GTCGGGGTTGTTAACGGGT 59.929 57.895 0.26 0.00 0.00 5.28
3112 4115 1.672030 GGTCGGGGTTGTTAACGGG 60.672 63.158 0.26 0.00 0.00 5.28
3113 4116 0.534652 TTGGTCGGGGTTGTTAACGG 60.535 55.000 0.26 0.00 0.00 4.44
3114 4117 1.198178 CATTGGTCGGGGTTGTTAACG 59.802 52.381 0.26 0.00 0.00 3.18
3115 4118 1.542472 CCATTGGTCGGGGTTGTTAAC 59.458 52.381 0.00 0.00 0.00 2.01
3116 4119 1.548128 CCCATTGGTCGGGGTTGTTAA 60.548 52.381 1.20 0.00 40.35 2.01
3117 4120 0.038455 CCCATTGGTCGGGGTTGTTA 59.962 55.000 1.20 0.00 40.35 2.41
3118 4121 1.228737 CCCATTGGTCGGGGTTGTT 60.229 57.895 1.20 0.00 40.35 2.83
3119 4122 2.438795 CCCATTGGTCGGGGTTGT 59.561 61.111 1.20 0.00 40.35 3.32
3124 4127 1.111277 GAAAATCCCCATTGGTCGGG 58.889 55.000 1.20 0.00 44.07 5.14
3125 4128 1.111277 GGAAAATCCCCATTGGTCGG 58.889 55.000 1.20 0.00 34.77 4.79
3126 4129 1.476488 GTGGAAAATCCCCATTGGTCG 59.524 52.381 1.20 0.00 35.03 4.79
3127 4130 1.476488 CGTGGAAAATCCCCATTGGTC 59.524 52.381 1.20 0.00 35.03 4.02
3128 4131 1.203125 ACGTGGAAAATCCCCATTGGT 60.203 47.619 1.20 0.00 35.03 3.67
3129 4132 1.204467 CACGTGGAAAATCCCCATTGG 59.796 52.381 7.95 0.00 35.03 3.16
3130 4133 1.892474 ACACGTGGAAAATCCCCATTG 59.108 47.619 21.57 0.00 35.03 2.82
3131 4134 2.302587 ACACGTGGAAAATCCCCATT 57.697 45.000 21.57 0.00 35.03 3.16
3132 4135 3.443145 TTACACGTGGAAAATCCCCAT 57.557 42.857 21.57 0.00 35.03 4.00
3133 4136 2.953284 TTACACGTGGAAAATCCCCA 57.047 45.000 21.57 0.00 35.03 4.96
3134 4137 4.218852 TGATTTTACACGTGGAAAATCCCC 59.781 41.667 45.56 34.10 45.35 4.81
3135 4138 5.379732 TGATTTTACACGTGGAAAATCCC 57.620 39.130 45.56 34.60 45.35 3.85
3136 4139 6.616947 TGATGATTTTACACGTGGAAAATCC 58.383 36.000 45.56 37.51 45.35 3.01
3137 4140 8.586273 CAATGATGATTTTACACGTGGAAAATC 58.414 33.333 44.38 44.38 45.80 2.17
3138 4141 7.545265 CCAATGATGATTTTACACGTGGAAAAT 59.455 33.333 39.00 39.00 37.83 1.82
3139 4142 6.865726 CCAATGATGATTTTACACGTGGAAAA 59.134 34.615 34.26 34.26 0.00 2.29
3140 4143 6.385843 CCAATGATGATTTTACACGTGGAAA 58.614 36.000 21.99 21.99 0.00 3.13
3141 4144 5.621104 GCCAATGATGATTTTACACGTGGAA 60.621 40.000 21.57 16.11 0.00 3.53
3142 4145 4.142491 GCCAATGATGATTTTACACGTGGA 60.142 41.667 21.57 9.00 0.00 4.02
3143 4146 4.104776 GCCAATGATGATTTTACACGTGG 58.895 43.478 21.57 1.66 0.00 4.94
3144 4147 4.794762 CAGCCAATGATGATTTTACACGTG 59.205 41.667 15.48 15.48 0.00 4.49
3145 4148 4.142403 CCAGCCAATGATGATTTTACACGT 60.142 41.667 0.00 0.00 0.00 4.49
3146 4149 4.096231 TCCAGCCAATGATGATTTTACACG 59.904 41.667 0.00 0.00 0.00 4.49
3147 4150 5.450965 CCTCCAGCCAATGATGATTTTACAC 60.451 44.000 0.00 0.00 0.00 2.90
3148 4151 4.646040 CCTCCAGCCAATGATGATTTTACA 59.354 41.667 0.00 0.00 0.00 2.41
3149 4152 4.889409 TCCTCCAGCCAATGATGATTTTAC 59.111 41.667 0.00 0.00 0.00 2.01
3150 4153 5.128033 TCCTCCAGCCAATGATGATTTTA 57.872 39.130 0.00 0.00 0.00 1.52
3151 4154 3.985127 TCCTCCAGCCAATGATGATTTT 58.015 40.909 0.00 0.00 0.00 1.82
3152 4155 3.675348 TCCTCCAGCCAATGATGATTT 57.325 42.857 0.00 0.00 0.00 2.17
3153 4156 3.675348 TTCCTCCAGCCAATGATGATT 57.325 42.857 0.00 0.00 0.00 2.57
3154 4157 3.294214 GTTTCCTCCAGCCAATGATGAT 58.706 45.455 0.00 0.00 0.00 2.45
3155 4158 2.726821 GTTTCCTCCAGCCAATGATGA 58.273 47.619 0.00 0.00 0.00 2.92


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.