Multiple sequence alignment - TraesCS5B01G315100

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G315100 chr5B 100.000 7632 0 0 1 7632 497220576 497212945 0.000000e+00 14094
1 TraesCS5B01G315100 chr5D 92.472 5526 192 99 2 5447 412745094 412739713 0.000000e+00 7694
2 TraesCS5B01G315100 chr5D 92.857 1526 57 21 5693 7188 412739478 412737975 0.000000e+00 2167
3 TraesCS5B01G315100 chr5D 95.833 240 8 2 5468 5707 412739729 412739492 3.340000e-103 387
4 TraesCS5B01G315100 chr5D 92.086 139 10 1 7461 7599 412737907 412737770 2.170000e-45 195
5 TraesCS5B01G315100 chr5A 91.367 5560 247 117 2 5447 524913413 524907973 0.000000e+00 7393
6 TraesCS5B01G315100 chr5A 89.374 1788 91 44 5470 7188 524907987 524906230 0.000000e+00 2158
7 TraesCS5B01G315100 chr7B 89.407 1501 121 26 1018 2506 323761216 323762690 0.000000e+00 1857
8 TraesCS5B01G315100 chr7B 85.880 602 56 21 2502 3100 323817001 323817576 1.410000e-171 614
9 TraesCS5B01G315100 chr2A 88.943 1022 84 15 1018 2024 160935341 160936348 0.000000e+00 1234
10 TraesCS5B01G315100 chr2A 86.007 586 54 10 2173 2758 161051203 161051760 3.050000e-168 603
11 TraesCS5B01G315100 chr2A 92.366 262 20 0 2827 3088 161060571 161060832 2.600000e-99 374
12 TraesCS5B01G315100 chr2A 93.671 158 10 0 2021 2178 161031312 161031469 3.560000e-58 237
13 TraesCS5B01G315100 chr6A 83.128 243 41 0 1881 2123 474333362 474333120 9.970000e-54 222
14 TraesCS5B01G315100 chr6A 79.882 169 16 12 1400 1552 474333820 474333654 2.910000e-19 108
15 TraesCS5B01G315100 chr6D 80.473 169 15 12 1400 1552 335068382 335068216 6.260000e-21 113
16 TraesCS5B01G315100 chr6B 80.473 169 15 12 1400 1552 485537400 485537566 6.260000e-21 113


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G315100 chr5B 497212945 497220576 7631 True 14094.00 14094 100.0000 1 7632 1 chr5B.!!$R1 7631
1 TraesCS5B01G315100 chr5D 412737770 412745094 7324 True 2610.75 7694 93.3120 2 7599 4 chr5D.!!$R1 7597
2 TraesCS5B01G315100 chr5A 524906230 524913413 7183 True 4775.50 7393 90.3705 2 7188 2 chr5A.!!$R1 7186
3 TraesCS5B01G315100 chr7B 323761216 323762690 1474 False 1857.00 1857 89.4070 1018 2506 1 chr7B.!!$F1 1488
4 TraesCS5B01G315100 chr7B 323817001 323817576 575 False 614.00 614 85.8800 2502 3100 1 chr7B.!!$F2 598
5 TraesCS5B01G315100 chr2A 160935341 160936348 1007 False 1234.00 1234 88.9430 1018 2024 1 chr2A.!!$F1 1006
6 TraesCS5B01G315100 chr2A 161051203 161051760 557 False 603.00 603 86.0070 2173 2758 1 chr2A.!!$F3 585

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
488 538 0.104725 ACCCCTCTCCTCCCATCATC 60.105 60.000 0.00 0.00 0.00 2.92 F
1301 1389 0.320073 TGCGTTCGATTTTCCTCGGT 60.320 50.000 0.00 0.00 39.13 4.69 F
1769 1866 0.389166 CGGACTGTCAGTCAGAAGCC 60.389 60.000 29.50 14.18 46.79 4.35 F
2821 2930 0.036010 GCCAGCCTAGTTTGAGCTCA 60.036 55.000 13.74 13.74 33.70 4.26 F
3327 3490 0.036294 GGCCCGGTATTCTATGCTCC 60.036 60.000 0.00 0.00 0.00 4.70 F
3539 3703 0.179084 TTCGATGCTTCCATCCGTCC 60.179 55.000 0.00 0.00 44.00 4.79 F
3572 3736 0.468226 CCCGAAATGCCTGGCTAGTA 59.532 55.000 21.03 0.00 0.00 1.82 F
5275 5466 0.040058 TGATGCAGGTTTCATGGCCT 59.960 50.000 3.32 0.00 35.04 5.19 F
5558 5749 1.509923 GATGCTCACCAAAGCCTGC 59.490 57.895 0.00 0.00 41.77 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1602 1697 0.743701 ACACACGTACGCACCCAAAA 60.744 50.000 16.72 0.00 0.00 2.44 R
2811 2920 1.070309 CGTCAGCAAGTGAGCTCAAAC 60.070 52.381 20.19 7.16 44.54 2.93 R
3470 3634 0.096976 AGCGAAAACAATGGCGATCG 59.903 50.000 11.69 11.69 0.00 3.69 R
4180 4356 0.242825 GCTGGTCACGCACAGTAGTA 59.757 55.000 0.00 0.00 37.07 1.82 R
4181 4357 1.006102 GCTGGTCACGCACAGTAGT 60.006 57.895 0.00 0.00 37.07 2.73 R
5275 5466 3.607741 CAACCCATGCATTTGCCAATAA 58.392 40.909 0.00 0.00 41.18 1.40 R
5540 5731 1.509923 GCAGGCTTTGGTGAGCATC 59.490 57.895 0.00 0.00 44.49 3.91 R
6169 6395 0.323999 ATGCATCAGCCAGCAGGAAA 60.324 50.000 0.00 0.00 44.94 3.13 R
7328 7599 0.253044 TGACCTGCTTCCTATGCCAC 59.747 55.000 0.00 0.00 0.00 5.01 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
19 20 3.670629 CTCCACCTCCCTCCGCTCT 62.671 68.421 0.00 0.00 0.00 4.09
26 27 2.904866 CCCTCCGCTCTCTCTCGG 60.905 72.222 0.00 0.00 46.52 4.63
33 42 2.640302 GCTCTCTCTCGGCACCACA 61.640 63.158 0.00 0.00 0.00 4.17
102 116 7.325660 TCTCAAGGTAAATACTACCAGTACG 57.674 40.000 3.88 0.00 39.99 3.67
133 149 1.327764 CTCGCTAAAAAGATCCGTGCC 59.672 52.381 0.00 0.00 0.00 5.01
167 184 3.790437 CCCAGATCCGTGCCTGCT 61.790 66.667 0.00 0.00 0.00 4.24
486 536 0.621571 CAACCCCTCTCCTCCCATCA 60.622 60.000 0.00 0.00 0.00 3.07
487 537 0.348370 AACCCCTCTCCTCCCATCAT 59.652 55.000 0.00 0.00 0.00 2.45
488 538 0.104725 ACCCCTCTCCTCCCATCATC 60.105 60.000 0.00 0.00 0.00 2.92
503 553 0.753479 TCATCTCGCACTCTCCTCCC 60.753 60.000 0.00 0.00 0.00 4.30
506 560 1.227664 CTCGCACTCTCCTCCCCTA 59.772 63.158 0.00 0.00 0.00 3.53
527 581 2.966516 ACTCTTCTTCCTCCACGAGTTT 59.033 45.455 0.00 0.00 0.00 2.66
529 583 2.299297 TCTTCTTCCTCCACGAGTTTCC 59.701 50.000 0.00 0.00 0.00 3.13
531 585 2.326428 TCTTCCTCCACGAGTTTCCTT 58.674 47.619 0.00 0.00 0.00 3.36
532 586 2.299297 TCTTCCTCCACGAGTTTCCTTC 59.701 50.000 0.00 0.00 0.00 3.46
533 587 2.011122 TCCTCCACGAGTTTCCTTCT 57.989 50.000 0.00 0.00 0.00 2.85
535 589 1.066787 CCTCCACGAGTTTCCTTCTCC 60.067 57.143 0.00 0.00 0.00 3.71
537 591 2.300437 CTCCACGAGTTTCCTTCTCCTT 59.700 50.000 0.00 0.00 0.00 3.36
538 592 2.037251 TCCACGAGTTTCCTTCTCCTTG 59.963 50.000 0.00 0.00 0.00 3.61
580 634 6.984740 TTGTTGTTATTCAGTTGAATTCGC 57.015 33.333 12.17 4.88 41.64 4.70
630 692 3.403558 GGGAGGGAGACTGGTGGC 61.404 72.222 0.00 0.00 0.00 5.01
631 693 3.775654 GGAGGGAGACTGGTGGCG 61.776 72.222 0.00 0.00 0.00 5.69
808 871 1.438469 TAATGCATGCCTAGCCCTCT 58.562 50.000 16.68 0.00 0.00 3.69
928 994 4.140900 TCTCGGGATAGAGGGAGAGATTTT 60.141 45.833 0.00 0.00 38.71 1.82
937 1003 5.584913 AGAGGGAGAGATTTTAGTCAGTCA 58.415 41.667 0.00 0.00 0.00 3.41
957 1026 8.210946 TCAGTCATCAGTCCTAGAAAAGAAAAA 58.789 33.333 0.00 0.00 0.00 1.94
958 1027 8.286097 CAGTCATCAGTCCTAGAAAAGAAAAAC 58.714 37.037 0.00 0.00 0.00 2.43
959 1028 7.993183 AGTCATCAGTCCTAGAAAAGAAAAACA 59.007 33.333 0.00 0.00 0.00 2.83
960 1029 8.621286 GTCATCAGTCCTAGAAAAGAAAAACAA 58.379 33.333 0.00 0.00 0.00 2.83
964 1033 6.972901 CAGTCCTAGAAAAGAAAAACAACACC 59.027 38.462 0.00 0.00 0.00 4.16
966 1035 5.066764 TCCTAGAAAAGAAAAACAACACCGG 59.933 40.000 0.00 0.00 0.00 5.28
970 1039 0.748729 AGAAAAACAACACCGGCGGA 60.749 50.000 35.78 0.00 0.00 5.54
990 1059 3.736759 GGAGAGTCTTTGTCTGTCGTTTC 59.263 47.826 0.00 0.00 0.00 2.78
991 1060 4.500035 GGAGAGTCTTTGTCTGTCGTTTCT 60.500 45.833 0.00 0.00 0.00 2.52
992 1061 5.278364 GGAGAGTCTTTGTCTGTCGTTTCTA 60.278 44.000 0.00 0.00 0.00 2.10
1183 1252 2.043248 TCTCCCTCGGCCTGGTAC 60.043 66.667 0.00 0.00 0.00 3.34
1187 1256 4.514577 CCTCGGCCTGGTACGCTG 62.515 72.222 0.00 0.00 0.00 5.18
1189 1258 3.989698 CTCGGCCTGGTACGCTGTG 62.990 68.421 0.00 0.00 34.10 3.66
1228 1301 0.659427 CATGCGCTCAATACCACTGG 59.341 55.000 9.73 0.00 0.00 4.00
1285 1373 2.656085 TCTTTGCCGTGTTTAATTGCG 58.344 42.857 0.00 0.00 0.00 4.85
1288 1376 2.039327 TGCCGTGTTTAATTGCGTTC 57.961 45.000 0.00 0.00 0.00 3.95
1295 1383 5.440971 CCGTGTTTAATTGCGTTCGATTTTC 60.441 40.000 0.00 0.00 0.00 2.29
1296 1384 5.440971 CGTGTTTAATTGCGTTCGATTTTCC 60.441 40.000 0.00 0.00 0.00 3.13
1301 1389 0.320073 TGCGTTCGATTTTCCTCGGT 60.320 50.000 0.00 0.00 39.13 4.69
1571 1662 1.274596 CAATTGCAATTCTCGCAGGC 58.725 50.000 21.70 0.00 41.18 4.85
1599 1694 7.266905 TGGTCTACTTTCTAGCCCTAAATTT 57.733 36.000 0.00 0.00 0.00 1.82
1602 1697 7.993758 GGTCTACTTTCTAGCCCTAAATTTCAT 59.006 37.037 0.00 0.00 0.00 2.57
1603 1698 9.397280 GTCTACTTTCTAGCCCTAAATTTCATT 57.603 33.333 0.00 0.00 0.00 2.57
1607 1702 8.314021 ACTTTCTAGCCCTAAATTTCATTTTGG 58.686 33.333 0.00 3.49 42.37 3.28
1615 1710 5.575218 CCTAAATTTCATTTTGGGTGCGTAC 59.425 40.000 0.00 0.00 40.13 3.67
1616 1711 2.690173 TTTCATTTTGGGTGCGTACG 57.310 45.000 11.84 11.84 0.00 3.67
1618 1713 0.869068 TCATTTTGGGTGCGTACGTG 59.131 50.000 17.90 3.74 0.00 4.49
1619 1714 0.589223 CATTTTGGGTGCGTACGTGT 59.411 50.000 17.90 0.00 0.00 4.49
1620 1715 0.589223 ATTTTGGGTGCGTACGTGTG 59.411 50.000 17.90 0.00 0.00 3.82
1737 1834 2.813474 TTCCAGAATCGCCGCACG 60.813 61.111 0.00 0.00 45.62 5.34
1769 1866 0.389166 CGGACTGTCAGTCAGAAGCC 60.389 60.000 29.50 14.18 46.79 4.35
1779 1876 3.326006 TCAGTCAGAAGCCAGAACAATCT 59.674 43.478 0.00 0.00 35.88 2.40
1781 1878 5.012046 TCAGTCAGAAGCCAGAACAATCTAA 59.988 40.000 0.00 0.00 33.50 2.10
1782 1879 5.350914 CAGTCAGAAGCCAGAACAATCTAAG 59.649 44.000 0.00 0.00 33.50 2.18
1796 1900 6.992063 ACAATCTAAGTATCTTTGGTGCAG 57.008 37.500 0.00 0.00 0.00 4.41
2589 2698 2.103538 GGTGCGCATTGCCATCAG 59.896 61.111 15.91 0.00 45.60 2.90
2769 2878 1.594833 GTGACCATGCACTCCCGTA 59.405 57.895 0.00 0.00 35.91 4.02
2771 2880 0.902984 TGACCATGCACTCCCGTAGT 60.903 55.000 0.00 0.00 39.81 2.73
2783 2892 2.959707 CTCCCGTAGTTTCATCCTAGCT 59.040 50.000 0.00 0.00 0.00 3.32
2784 2893 2.957006 TCCCGTAGTTTCATCCTAGCTC 59.043 50.000 0.00 0.00 0.00 4.09
2785 2894 2.036089 CCCGTAGTTTCATCCTAGCTCC 59.964 54.545 0.00 0.00 0.00 4.70
2787 2896 3.491104 CCGTAGTTTCATCCTAGCTCCAC 60.491 52.174 0.00 0.00 0.00 4.02
2788 2897 2.969628 AGTTTCATCCTAGCTCCACG 57.030 50.000 0.00 0.00 0.00 4.94
2789 2898 1.134670 AGTTTCATCCTAGCTCCACGC 60.135 52.381 0.00 0.00 39.57 5.34
2821 2930 0.036010 GCCAGCCTAGTTTGAGCTCA 60.036 55.000 13.74 13.74 33.70 4.26
2824 2933 2.289945 CCAGCCTAGTTTGAGCTCACTT 60.290 50.000 18.03 7.48 33.70 3.16
2825 2934 2.740981 CAGCCTAGTTTGAGCTCACTTG 59.259 50.000 18.03 11.98 33.70 3.16
2840 2969 1.130613 CTTGCTGACGTTACGCTGC 59.869 57.895 17.91 17.91 0.00 5.25
2841 2970 1.284982 CTTGCTGACGTTACGCTGCT 61.285 55.000 22.12 0.00 32.80 4.24
2882 3011 4.735132 GTGCTGTCGCCGCTGGTA 62.735 66.667 0.00 0.00 34.43 3.25
3168 3312 4.944372 CTCCATCGGCCGGCGTAC 62.944 72.222 27.83 5.60 0.00 3.67
3171 3315 3.598715 CATCGGCCGGCGTACCTA 61.599 66.667 27.83 2.60 0.00 3.08
3178 3322 4.197498 CGGCGTACCTACCCACGG 62.197 72.222 0.00 0.00 38.57 4.94
3180 3324 4.519437 GCGTACCTACCCACGGCC 62.519 72.222 0.00 0.00 38.57 6.13
3208 3368 1.676746 CAGCCCATGATCAGTCCTTG 58.323 55.000 0.09 0.00 0.00 3.61
3216 3376 1.271543 TGATCAGTCCTTGTGCCTTGG 60.272 52.381 0.00 0.00 0.00 3.61
3257 3417 2.359107 CATGTGGCGGCAGTCAGT 60.359 61.111 13.91 0.00 29.49 3.41
3327 3490 0.036294 GGCCCGGTATTCTATGCTCC 60.036 60.000 0.00 0.00 0.00 4.70
3328 3491 0.389948 GCCCGGTATTCTATGCTCCG 60.390 60.000 0.00 0.00 40.72 4.63
3363 3527 1.467920 GAAGGTGAATCCAAGGCCAG 58.532 55.000 5.01 0.00 39.02 4.85
3365 3529 2.054453 GGTGAATCCAAGGCCAGCC 61.054 63.158 5.01 0.00 35.97 4.85
3366 3530 2.045045 TGAATCCAAGGCCAGCCG 60.045 61.111 5.01 0.00 41.95 5.52
3367 3531 2.830370 GAATCCAAGGCCAGCCGG 60.830 66.667 5.01 0.00 41.95 6.13
3397 3561 3.583806 CTCAAGTCAATGCTCTCGTCTT 58.416 45.455 0.00 0.00 0.00 3.01
3449 3613 2.483013 GCGTGCATAGGATCAGTTGGTA 60.483 50.000 0.00 0.00 0.00 3.25
3494 3658 0.389817 GCCATTGTTTTCGCTTCCCC 60.390 55.000 0.00 0.00 0.00 4.81
3495 3659 0.965439 CCATTGTTTTCGCTTCCCCA 59.035 50.000 0.00 0.00 0.00 4.96
3505 3669 2.677875 CTTCCCCAAGCAGGCACC 60.678 66.667 0.00 0.00 35.39 5.01
3538 3702 1.327764 GTTTCGATGCTTCCATCCGTC 59.672 52.381 0.00 0.00 44.00 4.79
3539 3703 0.179084 TTCGATGCTTCCATCCGTCC 60.179 55.000 0.00 0.00 44.00 4.79
3540 3704 1.951130 CGATGCTTCCATCCGTCCG 60.951 63.158 0.00 0.00 44.00 4.79
3541 3705 2.203070 ATGCTTCCATCCGTCCGC 60.203 61.111 0.00 0.00 0.00 5.54
3542 3706 3.757248 ATGCTTCCATCCGTCCGCC 62.757 63.158 0.00 0.00 0.00 6.13
3544 3708 4.891727 CTTCCATCCGTCCGCCCG 62.892 72.222 0.00 0.00 0.00 6.13
3572 3736 0.468226 CCCGAAATGCCTGGCTAGTA 59.532 55.000 21.03 0.00 0.00 1.82
3617 3781 5.429681 TCCTTGGCTGCTTATACAACTAA 57.570 39.130 0.00 0.00 0.00 2.24
3618 3782 5.428253 TCCTTGGCTGCTTATACAACTAAG 58.572 41.667 0.00 0.00 32.84 2.18
3619 3783 5.045869 TCCTTGGCTGCTTATACAACTAAGT 60.046 40.000 0.00 0.00 32.39 2.24
3621 3785 6.480320 CCTTGGCTGCTTATACAACTAAGTAG 59.520 42.308 0.00 5.04 41.58 2.57
3622 3786 6.785337 TGGCTGCTTATACAACTAAGTAGA 57.215 37.500 11.52 0.00 41.34 2.59
3623 3787 6.570692 TGGCTGCTTATACAACTAAGTAGAC 58.429 40.000 11.52 9.58 44.92 2.59
3625 3789 6.406624 GGCTGCTTATACAACTAAGTAGACCA 60.407 42.308 11.52 0.00 41.20 4.02
3626 3790 6.476053 GCTGCTTATACAACTAAGTAGACCAC 59.524 42.308 11.52 0.00 41.34 4.16
3627 3791 7.630944 GCTGCTTATACAACTAAGTAGACCACT 60.631 40.741 11.52 0.00 41.34 4.00
3635 3799 4.379221 GTAGACCACTACGCGCTG 57.621 61.111 5.73 0.62 39.36 5.18
3636 3800 1.505353 GTAGACCACTACGCGCTGT 59.495 57.895 5.73 8.05 39.36 4.40
3637 3801 0.729116 GTAGACCACTACGCGCTGTA 59.271 55.000 5.73 8.86 39.36 2.74
3638 3802 0.729116 TAGACCACTACGCGCTGTAC 59.271 55.000 5.73 0.89 0.00 2.90
3639 3803 1.210931 GACCACTACGCGCTGTACA 59.789 57.895 5.73 0.00 0.00 2.90
3642 3806 1.349259 CCACTACGCGCTGTACAACC 61.349 60.000 5.73 0.00 0.00 3.77
3655 3819 2.038033 TGTACAACCCAACTAGTCCAGC 59.962 50.000 0.00 0.00 0.00 4.85
3719 3888 5.059161 TCCATGCTGCTAATGAGTAATGAC 58.941 41.667 0.00 0.00 0.00 3.06
3720 3889 4.084171 CCATGCTGCTAATGAGTAATGACG 60.084 45.833 0.00 0.00 0.00 4.35
3721 3890 4.385358 TGCTGCTAATGAGTAATGACGA 57.615 40.909 0.00 0.00 0.00 4.20
3722 3891 4.363138 TGCTGCTAATGAGTAATGACGAG 58.637 43.478 0.00 0.00 0.00 4.18
3757 3926 4.324991 GACACCCCACGTGACCCC 62.325 72.222 19.30 0.00 46.20 4.95
3823 3992 2.091277 GTCGCAGATTATGTCTATGCGC 59.909 50.000 12.56 0.00 44.48 6.09
3826 3995 1.058270 CAGATTATGTCTATGCGCGCG 59.942 52.381 28.44 28.44 34.69 6.86
3848 4017 4.827087 CTGATCGCCAGCCGCTGT 62.827 66.667 18.98 0.00 35.89 4.40
3849 4018 3.430565 CTGATCGCCAGCCGCTGTA 62.431 63.158 18.98 4.82 35.89 2.74
3850 4019 2.962253 GATCGCCAGCCGCTGTAC 60.962 66.667 18.98 9.76 36.73 2.90
3851 4020 3.432051 GATCGCCAGCCGCTGTACT 62.432 63.158 18.98 0.95 36.73 2.73
3852 4021 3.723235 ATCGCCAGCCGCTGTACTG 62.723 63.158 18.98 4.90 36.73 2.74
3855 4024 3.121030 CCAGCCGCTGTACTGCAC 61.121 66.667 22.49 14.39 32.37 4.57
3893 4062 1.093972 CGACCATTTGCATGCCTGTA 58.906 50.000 16.68 0.00 0.00 2.74
4045 4220 2.510613 TCATGGCCGATCAGATACGTA 58.489 47.619 0.00 0.00 0.00 3.57
4046 4221 2.488153 TCATGGCCGATCAGATACGTAG 59.512 50.000 0.08 0.00 0.00 3.51
4047 4222 0.596577 TGGCCGATCAGATACGTAGC 59.403 55.000 1.72 1.72 0.00 3.58
4048 4223 0.596577 GGCCGATCAGATACGTAGCA 59.403 55.000 14.09 0.00 0.00 3.49
4049 4224 1.000607 GGCCGATCAGATACGTAGCAA 60.001 52.381 14.09 0.71 0.00 3.91
4087 4262 2.356313 CTGTCGTTGCTCGTGGCT 60.356 61.111 5.00 0.00 42.39 4.75
4122 4298 1.544314 GGCTTGTCCTCTTGCTTCAGT 60.544 52.381 0.00 0.00 0.00 3.41
4123 4299 1.534595 GCTTGTCCTCTTGCTTCAGTG 59.465 52.381 0.00 0.00 0.00 3.66
4129 4305 2.902486 TCCTCTTGCTTCAGTGAGTGAT 59.098 45.455 0.00 0.00 34.17 3.06
4130 4306 3.001414 CCTCTTGCTTCAGTGAGTGATG 58.999 50.000 0.00 0.00 34.17 3.07
4136 4312 2.081462 CTTCAGTGAGTGATGCATGCA 58.919 47.619 25.04 25.04 34.17 3.96
4157 4333 4.588854 TGTTACACGCACGCCGGT 62.589 61.111 1.90 0.00 42.52 5.28
4165 4341 1.284297 ACGCACGCCGGTTTTACTAC 61.284 55.000 1.90 0.00 42.52 2.73
4170 4346 3.174375 CACGCCGGTTTTACTACTACTC 58.826 50.000 1.90 0.00 0.00 2.59
4171 4347 2.164422 ACGCCGGTTTTACTACTACTCC 59.836 50.000 1.90 0.00 0.00 3.85
4172 4348 2.424956 CGCCGGTTTTACTACTACTCCT 59.575 50.000 1.90 0.00 0.00 3.69
4173 4349 3.627577 CGCCGGTTTTACTACTACTCCTA 59.372 47.826 1.90 0.00 0.00 2.94
4174 4350 4.496507 CGCCGGTTTTACTACTACTCCTAC 60.497 50.000 1.90 0.00 0.00 3.18
4175 4351 4.642437 GCCGGTTTTACTACTACTCCTACT 59.358 45.833 1.90 0.00 0.00 2.57
4176 4352 5.126222 GCCGGTTTTACTACTACTCCTACTT 59.874 44.000 1.90 0.00 0.00 2.24
4177 4353 6.679146 GCCGGTTTTACTACTACTCCTACTTC 60.679 46.154 1.90 0.00 0.00 3.01
4178 4354 6.601217 CCGGTTTTACTACTACTCCTACTTCT 59.399 42.308 0.00 0.00 0.00 2.85
4179 4355 7.121907 CCGGTTTTACTACTACTCCTACTTCTT 59.878 40.741 0.00 0.00 0.00 2.52
4180 4356 8.518702 CGGTTTTACTACTACTCCTACTTCTTT 58.481 37.037 0.00 0.00 0.00 2.52
4285 4461 4.722700 GAGCCAGCGGGGAAAGCA 62.723 66.667 4.64 0.00 40.01 3.91
4774 4951 2.262915 GTGCTCAGCGCTACCACT 59.737 61.111 10.99 0.00 40.11 4.00
4831 5008 2.708255 GACTACCTCCGCGACGAG 59.292 66.667 8.23 6.53 0.00 4.18
4939 5116 2.359404 GTCTCCCTCCTCCGTCCA 59.641 66.667 0.00 0.00 0.00 4.02
4985 5162 6.259123 ACCTTCCATCATTTCTCATTTCCTT 58.741 36.000 0.00 0.00 0.00 3.36
5039 5227 8.668510 TTCTGTTCCTCATAATTAATCTCAGC 57.331 34.615 0.00 0.00 0.00 4.26
5057 5245 3.067601 TCAGCGTCTTCTGACACTTGTTA 59.932 43.478 0.00 0.00 43.06 2.41
5153 5344 4.778534 AACTTCTGCAACCAGATCAATG 57.221 40.909 0.00 0.00 46.84 2.82
5275 5466 0.040058 TGATGCAGGTTTCATGGCCT 59.960 50.000 3.32 0.00 35.04 5.19
5425 5616 6.668541 TGACATTTGTGATAGAAAGCTAGC 57.331 37.500 6.62 6.62 33.67 3.42
5426 5617 6.409704 TGACATTTGTGATAGAAAGCTAGCT 58.590 36.000 12.68 12.68 34.18 3.32
5428 5619 6.176183 ACATTTGTGATAGAAAGCTAGCTGT 58.824 36.000 20.16 14.01 34.18 4.40
5430 5621 7.824289 ACATTTGTGATAGAAAGCTAGCTGTTA 59.176 33.333 20.16 11.47 34.18 2.41
5431 5622 8.668353 CATTTGTGATAGAAAGCTAGCTGTTAA 58.332 33.333 20.16 5.23 34.18 2.01
5432 5623 7.596749 TTGTGATAGAAAGCTAGCTGTTAAC 57.403 36.000 20.16 11.00 34.18 2.01
5433 5624 6.936279 TGTGATAGAAAGCTAGCTGTTAACT 58.064 36.000 20.16 14.77 34.18 2.24
5434 5625 7.386851 TGTGATAGAAAGCTAGCTGTTAACTT 58.613 34.615 20.16 7.48 34.18 2.66
5435 5626 7.878127 TGTGATAGAAAGCTAGCTGTTAACTTT 59.122 33.333 20.16 6.64 34.18 2.66
5436 5627 8.722394 GTGATAGAAAGCTAGCTGTTAACTTTT 58.278 33.333 20.16 5.80 34.18 2.27
5437 5628 8.936864 TGATAGAAAGCTAGCTGTTAACTTTTC 58.063 33.333 20.16 15.04 34.18 2.29
5438 5629 6.561737 AGAAAGCTAGCTGTTAACTTTTCC 57.438 37.500 20.16 0.00 29.94 3.13
5439 5630 5.473846 AGAAAGCTAGCTGTTAACTTTTCCC 59.526 40.000 20.16 0.00 29.94 3.97
5440 5631 4.642466 AGCTAGCTGTTAACTTTTCCCT 57.358 40.909 18.57 0.00 0.00 4.20
5441 5632 4.580868 AGCTAGCTGTTAACTTTTCCCTC 58.419 43.478 18.57 0.00 0.00 4.30
5442 5633 3.690139 GCTAGCTGTTAACTTTTCCCTCC 59.310 47.826 7.70 0.00 0.00 4.30
5443 5634 4.565861 GCTAGCTGTTAACTTTTCCCTCCT 60.566 45.833 7.70 0.00 0.00 3.69
5444 5635 4.455070 AGCTGTTAACTTTTCCCTCCTT 57.545 40.909 7.22 0.00 0.00 3.36
5445 5636 4.804597 AGCTGTTAACTTTTCCCTCCTTT 58.195 39.130 7.22 0.00 0.00 3.11
5446 5637 5.208890 AGCTGTTAACTTTTCCCTCCTTTT 58.791 37.500 7.22 0.00 0.00 2.27
5447 5638 5.661312 AGCTGTTAACTTTTCCCTCCTTTTT 59.339 36.000 7.22 0.00 0.00 1.94
5448 5639 5.753438 GCTGTTAACTTTTCCCTCCTTTTTG 59.247 40.000 7.22 0.00 0.00 2.44
5449 5640 6.406512 GCTGTTAACTTTTCCCTCCTTTTTGA 60.407 38.462 7.22 0.00 0.00 2.69
5450 5641 7.107639 TGTTAACTTTTCCCTCCTTTTTGAG 57.892 36.000 7.22 0.00 0.00 3.02
5451 5642 6.666113 TGTTAACTTTTCCCTCCTTTTTGAGT 59.334 34.615 7.22 0.00 0.00 3.41
5452 5643 7.179516 TGTTAACTTTTCCCTCCTTTTTGAGTT 59.820 33.333 7.22 0.00 0.00 3.01
5453 5644 6.620877 AACTTTTCCCTCCTTTTTGAGTTT 57.379 33.333 0.00 0.00 0.00 2.66
5454 5645 6.222038 ACTTTTCCCTCCTTTTTGAGTTTC 57.778 37.500 0.00 0.00 0.00 2.78
5455 5646 5.719563 ACTTTTCCCTCCTTTTTGAGTTTCA 59.280 36.000 0.00 0.00 0.00 2.69
5456 5647 6.212589 ACTTTTCCCTCCTTTTTGAGTTTCAA 59.787 34.615 0.00 0.00 34.03 2.69
5457 5648 6.613153 TTTCCCTCCTTTTTGAGTTTCAAA 57.387 33.333 0.36 0.36 43.84 2.69
5540 5731 1.651240 CCTTGTCCTCGCTTGCATGG 61.651 60.000 1.34 0.00 0.00 3.66
5558 5749 1.509923 GATGCTCACCAAAGCCTGC 59.490 57.895 0.00 0.00 41.77 4.85
5671 5862 2.378038 GCTTGGCAATATCCTGGTTCA 58.622 47.619 0.00 0.00 0.00 3.18
5672 5863 2.099756 GCTTGGCAATATCCTGGTTCAC 59.900 50.000 0.00 0.00 0.00 3.18
5723 5944 5.367937 ACCAGGATTCTACTAGCATGATTGT 59.632 40.000 3.14 3.14 0.00 2.71
5889 6114 7.959175 ACTACCTCCGTGCAATAATATAAGAA 58.041 34.615 0.00 0.00 0.00 2.52
5930 6155 1.720852 GCTGCAAAAACGCCTTACATG 59.279 47.619 0.00 0.00 0.00 3.21
5937 6162 5.619086 GCAAAAACGCCTTACATGAGTGTAT 60.619 40.000 0.00 0.00 40.35 2.29
5946 6171 6.307776 CCTTACATGAGTGTATAGAGGGAGA 58.692 44.000 0.00 0.00 40.35 3.71
5952 6177 9.386122 ACATGAGTGTATAGAGGGAGAAATATT 57.614 33.333 0.00 0.00 36.63 1.28
5988 6213 7.515684 GCAAGCAAATTTAACACAGTGAAAGAG 60.516 37.037 7.81 0.00 0.00 2.85
6001 6226 4.857588 CAGTGAAAGAGAGCAATTGAATGC 59.142 41.667 10.34 0.00 46.78 3.56
6131 6357 5.759273 AGCTGACAATTTAAATGCTTGCAAA 59.241 32.000 0.00 0.00 0.00 3.68
6199 6425 2.547211 GGCTGATGCATGTCACTGATAC 59.453 50.000 2.46 0.00 41.91 2.24
6358 6584 2.104859 CGACTCGGCCTACGTCTCA 61.105 63.158 0.00 0.00 44.69 3.27
6456 6682 2.410469 GTCGCCCAATGCTCATGC 59.590 61.111 0.00 0.00 38.05 4.06
6474 6700 2.412525 CGGCAGCAGCAACAACAA 59.587 55.556 2.65 0.00 44.61 2.83
6511 6737 0.105039 CCGTGGCCTTCCAGATACTC 59.895 60.000 3.32 0.00 44.48 2.59
6604 6830 1.561643 TCCAGAAGATCAAGTCCGCT 58.438 50.000 0.00 0.00 0.00 5.52
6676 6902 1.303317 GGATTCCGGCCAACACACT 60.303 57.895 2.24 0.00 0.00 3.55
6754 6986 6.039616 GTGTAAGATCACAAAGCTAGAGGAG 58.960 44.000 0.00 0.00 38.12 3.69
6763 7004 4.841246 ACAAAGCTAGAGGAGGAAGAAGAA 59.159 41.667 0.00 0.00 0.00 2.52
6764 7005 5.046663 ACAAAGCTAGAGGAGGAAGAAGAAG 60.047 44.000 0.00 0.00 0.00 2.85
6765 7006 4.601406 AGCTAGAGGAGGAAGAAGAAGA 57.399 45.455 0.00 0.00 0.00 2.87
6766 7007 5.142806 AGCTAGAGGAGGAAGAAGAAGAT 57.857 43.478 0.00 0.00 0.00 2.40
6767 7008 5.528337 AGCTAGAGGAGGAAGAAGAAGATT 58.472 41.667 0.00 0.00 0.00 2.40
6768 7009 5.963865 AGCTAGAGGAGGAAGAAGAAGATTT 59.036 40.000 0.00 0.00 0.00 2.17
6769 7010 6.098266 AGCTAGAGGAGGAAGAAGAAGATTTC 59.902 42.308 0.00 0.00 0.00 2.17
6770 7011 6.127196 GCTAGAGGAGGAAGAAGAAGATTTCA 60.127 42.308 0.00 0.00 0.00 2.69
6773 7014 6.048732 AGGAGGAAGAAGAAGATTTCAGAC 57.951 41.667 0.00 0.00 0.00 3.51
6774 7015 4.867608 GGAGGAAGAAGAAGATTTCAGACG 59.132 45.833 0.00 0.00 0.00 4.18
6776 7017 5.719173 AGGAAGAAGAAGATTTCAGACGAG 58.281 41.667 0.00 0.00 0.00 4.18
6777 7018 5.245075 AGGAAGAAGAAGATTTCAGACGAGT 59.755 40.000 0.00 0.00 0.00 4.18
6793 7034 3.643763 ACGAGTTTCGGATCATCATAGC 58.356 45.455 3.37 0.00 45.59 2.97
6845 7086 6.090483 AGTGTGGAGATGGAATTAGTATCG 57.910 41.667 0.00 0.00 0.00 2.92
6918 7159 3.034923 CTCGCGCTAGGCATGCTC 61.035 66.667 18.92 7.89 43.84 4.26
7065 7311 9.369904 CTAGTGCTTTGGTTTAATTAATGCATT 57.630 29.630 17.56 17.56 37.01 3.56
7179 7450 5.197451 TGTTGGAATGGGTTCATATACACC 58.803 41.667 0.00 0.00 36.01 4.16
7188 7459 8.238189 AATGGGTTCATATACACCATGTTGTGT 61.238 37.037 6.09 9.37 40.84 3.72
7197 7468 4.414999 CACCATGTTGTGTTCTGATCTG 57.585 45.455 0.00 0.00 0.00 2.90
7198 7469 3.817084 CACCATGTTGTGTTCTGATCTGT 59.183 43.478 0.00 0.00 0.00 3.41
7199 7470 3.817084 ACCATGTTGTGTTCTGATCTGTG 59.183 43.478 0.00 0.00 0.00 3.66
7200 7471 3.189910 CCATGTTGTGTTCTGATCTGTGG 59.810 47.826 0.00 0.00 0.00 4.17
7202 7473 3.205338 TGTTGTGTTCTGATCTGTGGTG 58.795 45.455 0.00 0.00 0.00 4.17
7203 7474 2.549064 TGTGTTCTGATCTGTGGTGG 57.451 50.000 0.00 0.00 0.00 4.61
7205 7476 2.172505 TGTGTTCTGATCTGTGGTGGTT 59.827 45.455 0.00 0.00 0.00 3.67
7206 7477 3.214328 GTGTTCTGATCTGTGGTGGTTT 58.786 45.455 0.00 0.00 0.00 3.27
7209 7480 4.102524 TGTTCTGATCTGTGGTGGTTTAGT 59.897 41.667 0.00 0.00 0.00 2.24
7210 7481 4.537135 TCTGATCTGTGGTGGTTTAGTC 57.463 45.455 0.00 0.00 0.00 2.59
7212 7483 4.532126 TCTGATCTGTGGTGGTTTAGTCAT 59.468 41.667 0.00 0.00 0.00 3.06
7214 7485 5.977635 TGATCTGTGGTGGTTTAGTCATAG 58.022 41.667 0.00 0.00 0.00 2.23
7215 7486 4.819105 TCTGTGGTGGTTTAGTCATAGG 57.181 45.455 0.00 0.00 0.00 2.57
7216 7487 3.055385 TCTGTGGTGGTTTAGTCATAGGC 60.055 47.826 0.00 0.00 0.00 3.93
7219 7490 4.532916 TGTGGTGGTTTAGTCATAGGCTTA 59.467 41.667 0.00 0.00 0.00 3.09
7220 7491 4.874396 GTGGTGGTTTAGTCATAGGCTTAC 59.126 45.833 0.00 0.00 0.00 2.34
7221 7492 4.781087 TGGTGGTTTAGTCATAGGCTTACT 59.219 41.667 0.00 0.00 0.00 2.24
7222 7493 5.105064 TGGTGGTTTAGTCATAGGCTTACTC 60.105 44.000 0.00 0.00 0.00 2.59
7224 7495 5.811100 GTGGTTTAGTCATAGGCTTACTCAC 59.189 44.000 0.00 0.00 0.00 3.51
7225 7496 5.482526 TGGTTTAGTCATAGGCTTACTCACA 59.517 40.000 0.00 0.00 0.00 3.58
7226 7497 6.156256 TGGTTTAGTCATAGGCTTACTCACAT 59.844 38.462 0.00 0.00 0.00 3.21
7227 7498 6.702282 GGTTTAGTCATAGGCTTACTCACATC 59.298 42.308 0.00 0.00 0.00 3.06
7228 7499 7.418025 GGTTTAGTCATAGGCTTACTCACATCT 60.418 40.741 0.00 0.00 0.00 2.90
7229 7500 7.661536 TTAGTCATAGGCTTACTCACATCTT 57.338 36.000 0.00 0.00 0.00 2.40
7230 7501 6.155475 AGTCATAGGCTTACTCACATCTTC 57.845 41.667 0.00 0.00 0.00 2.87
7232 7503 6.382570 AGTCATAGGCTTACTCACATCTTCTT 59.617 38.462 0.00 0.00 0.00 2.52
7233 7504 6.478344 GTCATAGGCTTACTCACATCTTCTTG 59.522 42.308 0.00 0.00 0.00 3.02
7234 7505 6.381133 TCATAGGCTTACTCACATCTTCTTGA 59.619 38.462 0.00 0.00 0.00 3.02
7235 7506 5.489792 AGGCTTACTCACATCTTCTTGAA 57.510 39.130 0.00 0.00 0.00 2.69
7237 7508 5.012561 AGGCTTACTCACATCTTCTTGAACT 59.987 40.000 0.00 0.00 0.00 3.01
7238 7509 5.703130 GGCTTACTCACATCTTCTTGAACTT 59.297 40.000 0.00 0.00 0.00 2.66
7239 7510 6.874134 GGCTTACTCACATCTTCTTGAACTTA 59.126 38.462 0.00 0.00 0.00 2.24
7283 7554 3.902881 AAAACAGGTCAAATTGCACCA 57.097 38.095 14.01 0.00 34.80 4.17
7284 7555 4.420522 AAAACAGGTCAAATTGCACCAT 57.579 36.364 14.01 3.00 34.80 3.55
7285 7556 3.389925 AACAGGTCAAATTGCACCATG 57.610 42.857 14.01 11.63 34.80 3.66
7286 7557 2.318908 ACAGGTCAAATTGCACCATGT 58.681 42.857 14.01 12.05 34.80 3.21
7287 7558 2.036217 ACAGGTCAAATTGCACCATGTG 59.964 45.455 14.01 8.22 34.80 3.21
7288 7559 1.619827 AGGTCAAATTGCACCATGTGG 59.380 47.619 14.01 0.00 42.17 4.17
7289 7560 1.617850 GGTCAAATTGCACCATGTGGA 59.382 47.619 5.96 0.00 38.94 4.02
7290 7561 2.610232 GGTCAAATTGCACCATGTGGAC 60.610 50.000 5.96 0.00 32.77 4.02
7291 7562 2.297033 GTCAAATTGCACCATGTGGACT 59.703 45.455 5.96 0.00 32.77 3.85
7292 7563 2.964464 TCAAATTGCACCATGTGGACTT 59.036 40.909 5.96 0.00 32.77 3.01
7293 7564 3.387374 TCAAATTGCACCATGTGGACTTT 59.613 39.130 5.96 0.00 37.26 2.66
7294 7565 3.389925 AATTGCACCATGTGGACTTTG 57.610 42.857 5.96 0.00 32.77 2.77
7295 7566 1.774110 TTGCACCATGTGGACTTTGT 58.226 45.000 5.96 0.00 32.77 2.83
7296 7567 1.317613 TGCACCATGTGGACTTTGTC 58.682 50.000 5.96 0.00 38.94 3.18
7297 7568 1.133823 TGCACCATGTGGACTTTGTCT 60.134 47.619 5.96 0.00 38.94 3.41
7298 7569 2.105649 TGCACCATGTGGACTTTGTCTA 59.894 45.455 5.96 0.00 38.94 2.59
7299 7570 3.244875 TGCACCATGTGGACTTTGTCTAT 60.245 43.478 5.96 0.00 38.94 1.98
7300 7571 3.127548 GCACCATGTGGACTTTGTCTATG 59.872 47.826 5.96 0.00 38.94 2.23
7301 7572 3.127548 CACCATGTGGACTTTGTCTATGC 59.872 47.826 5.96 0.00 38.94 3.14
7302 7573 3.244875 ACCATGTGGACTTTGTCTATGCA 60.245 43.478 5.96 0.00 38.94 3.96
7303 7574 3.949754 CCATGTGGACTTTGTCTATGCAT 59.050 43.478 3.79 3.79 37.39 3.96
7304 7575 5.125356 CCATGTGGACTTTGTCTATGCATA 58.875 41.667 6.20 6.20 37.39 3.14
7305 7576 5.766670 CCATGTGGACTTTGTCTATGCATAT 59.233 40.000 6.92 0.00 37.39 1.78
7306 7577 6.936335 CCATGTGGACTTTGTCTATGCATATA 59.064 38.462 6.92 0.00 37.39 0.86
7307 7578 7.609146 CCATGTGGACTTTGTCTATGCATATAT 59.391 37.037 6.92 0.00 37.39 0.86
7308 7579 7.967890 TGTGGACTTTGTCTATGCATATATG 57.032 36.000 6.92 8.45 32.47 1.78
7309 7580 7.734942 TGTGGACTTTGTCTATGCATATATGA 58.265 34.615 17.10 0.00 32.47 2.15
7310 7581 7.657354 TGTGGACTTTGTCTATGCATATATGAC 59.343 37.037 17.10 11.68 32.47 3.06
7311 7582 7.875041 GTGGACTTTGTCTATGCATATATGACT 59.125 37.037 17.10 4.94 32.47 3.41
7312 7583 8.432013 TGGACTTTGTCTATGCATATATGACTT 58.568 33.333 17.10 8.41 32.47 3.01
7313 7584 9.929180 GGACTTTGTCTATGCATATATGACTTA 57.071 33.333 17.10 9.02 32.47 2.24
7341 7612 7.568199 TTTCTTATTTAGTGGCATAGGAAGC 57.432 36.000 0.00 0.00 0.00 3.86
7342 7613 6.247229 TCTTATTTAGTGGCATAGGAAGCA 57.753 37.500 0.00 0.00 0.00 3.91
7343 7614 6.291377 TCTTATTTAGTGGCATAGGAAGCAG 58.709 40.000 0.00 0.00 0.00 4.24
7344 7615 3.281727 TTTAGTGGCATAGGAAGCAGG 57.718 47.619 0.00 0.00 0.00 4.85
7345 7616 1.879575 TAGTGGCATAGGAAGCAGGT 58.120 50.000 0.00 0.00 0.00 4.00
7346 7617 0.543749 AGTGGCATAGGAAGCAGGTC 59.456 55.000 0.00 0.00 0.00 3.85
7347 7618 0.253044 GTGGCATAGGAAGCAGGTCA 59.747 55.000 0.00 0.00 0.00 4.02
7348 7619 0.991146 TGGCATAGGAAGCAGGTCAA 59.009 50.000 0.00 0.00 0.00 3.18
7349 7620 1.354031 TGGCATAGGAAGCAGGTCAAA 59.646 47.619 0.00 0.00 0.00 2.69
7350 7621 2.224992 TGGCATAGGAAGCAGGTCAAAA 60.225 45.455 0.00 0.00 0.00 2.44
7351 7622 3.026694 GGCATAGGAAGCAGGTCAAAAT 58.973 45.455 0.00 0.00 0.00 1.82
7352 7623 3.448660 GGCATAGGAAGCAGGTCAAAATT 59.551 43.478 0.00 0.00 0.00 1.82
7353 7624 4.427312 GCATAGGAAGCAGGTCAAAATTG 58.573 43.478 0.00 0.00 0.00 2.32
7354 7625 4.082026 GCATAGGAAGCAGGTCAAAATTGT 60.082 41.667 0.00 0.00 0.00 2.71
7355 7626 5.125417 GCATAGGAAGCAGGTCAAAATTGTA 59.875 40.000 0.00 0.00 0.00 2.41
7356 7627 6.555315 CATAGGAAGCAGGTCAAAATTGTAC 58.445 40.000 0.00 0.00 0.00 2.90
7357 7628 4.469657 AGGAAGCAGGTCAAAATTGTACA 58.530 39.130 0.00 0.00 0.00 2.90
7358 7629 5.079643 AGGAAGCAGGTCAAAATTGTACAT 58.920 37.500 0.00 0.00 0.00 2.29
7359 7630 5.539955 AGGAAGCAGGTCAAAATTGTACATT 59.460 36.000 0.00 0.00 0.00 2.71
7360 7631 6.041979 AGGAAGCAGGTCAAAATTGTACATTT 59.958 34.615 0.00 0.00 0.00 2.32
7361 7632 6.366061 GGAAGCAGGTCAAAATTGTACATTTC 59.634 38.462 0.00 0.00 0.00 2.17
7362 7633 6.655078 AGCAGGTCAAAATTGTACATTTCT 57.345 33.333 0.00 0.00 0.00 2.52
7363 7634 7.054491 AGCAGGTCAAAATTGTACATTTCTT 57.946 32.000 0.00 0.00 0.00 2.52
7364 7635 8.177119 AGCAGGTCAAAATTGTACATTTCTTA 57.823 30.769 0.00 0.00 0.00 2.10
7365 7636 8.806146 AGCAGGTCAAAATTGTACATTTCTTAT 58.194 29.630 0.00 0.00 0.00 1.73
7366 7637 9.423061 GCAGGTCAAAATTGTACATTTCTTATT 57.577 29.630 0.00 0.00 0.00 1.40
7371 7642 9.638239 TCAAAATTGTACATTTCTTATTCAGGC 57.362 29.630 0.00 0.00 0.00 4.85
7372 7643 8.872845 CAAAATTGTACATTTCTTATTCAGGCC 58.127 33.333 0.00 0.00 0.00 5.19
7373 7644 7.961326 AATTGTACATTTCTTATTCAGGCCT 57.039 32.000 0.00 0.00 0.00 5.19
7374 7645 9.474313 AAATTGTACATTTCTTATTCAGGCCTA 57.526 29.630 3.98 0.00 0.00 3.93
7375 7646 8.682936 ATTGTACATTTCTTATTCAGGCCTAG 57.317 34.615 3.98 0.00 0.00 3.02
7376 7647 6.591935 TGTACATTTCTTATTCAGGCCTAGG 58.408 40.000 3.98 3.67 0.00 3.02
7377 7648 5.717119 ACATTTCTTATTCAGGCCTAGGT 57.283 39.130 3.98 0.00 0.00 3.08
7378 7649 5.440610 ACATTTCTTATTCAGGCCTAGGTG 58.559 41.667 3.98 1.32 0.00 4.00
7379 7650 5.191722 ACATTTCTTATTCAGGCCTAGGTGA 59.808 40.000 3.98 4.12 0.00 4.02
7380 7651 5.772393 TTTCTTATTCAGGCCTAGGTGAA 57.228 39.130 15.17 15.17 37.10 3.18
7381 7652 5.975988 TTCTTATTCAGGCCTAGGTGAAT 57.024 39.130 23.76 23.76 44.00 2.57
7382 7653 5.296151 TCTTATTCAGGCCTAGGTGAATG 57.704 43.478 26.65 16.54 42.19 2.67
7383 7654 4.968719 TCTTATTCAGGCCTAGGTGAATGA 59.031 41.667 26.65 20.84 42.19 2.57
7384 7655 3.853355 ATTCAGGCCTAGGTGAATGAG 57.147 47.619 21.14 2.93 40.98 2.90
7385 7656 0.833287 TCAGGCCTAGGTGAATGAGC 59.167 55.000 3.98 0.00 0.00 4.26
7386 7657 0.835941 CAGGCCTAGGTGAATGAGCT 59.164 55.000 3.98 0.00 36.09 4.09
7387 7658 1.211457 CAGGCCTAGGTGAATGAGCTT 59.789 52.381 3.98 0.00 33.31 3.74
7388 7659 2.435805 CAGGCCTAGGTGAATGAGCTTA 59.564 50.000 3.98 0.00 33.31 3.09
7389 7660 3.115390 AGGCCTAGGTGAATGAGCTTAA 58.885 45.455 1.29 0.00 33.31 1.85
7390 7661 3.718956 AGGCCTAGGTGAATGAGCTTAAT 59.281 43.478 1.29 0.00 33.31 1.40
7391 7662 4.166919 AGGCCTAGGTGAATGAGCTTAATT 59.833 41.667 1.29 0.00 33.31 1.40
7392 7663 4.889995 GGCCTAGGTGAATGAGCTTAATTT 59.110 41.667 11.31 0.00 33.31 1.82
7393 7664 5.221126 GGCCTAGGTGAATGAGCTTAATTTG 60.221 44.000 11.31 0.00 33.31 2.32
7394 7665 5.358160 GCCTAGGTGAATGAGCTTAATTTGT 59.642 40.000 11.31 0.00 33.31 2.83
7395 7666 6.678900 GCCTAGGTGAATGAGCTTAATTTGTG 60.679 42.308 11.31 0.00 33.31 3.33
7396 7667 6.599244 CCTAGGTGAATGAGCTTAATTTGTGA 59.401 38.462 0.00 0.00 33.31 3.58
7397 7668 6.899393 AGGTGAATGAGCTTAATTTGTGAA 57.101 33.333 0.00 0.00 0.00 3.18
7398 7669 7.288810 AGGTGAATGAGCTTAATTTGTGAAA 57.711 32.000 0.00 0.00 0.00 2.69
7399 7670 7.725251 AGGTGAATGAGCTTAATTTGTGAAAA 58.275 30.769 0.00 0.00 0.00 2.29
7400 7671 8.203485 AGGTGAATGAGCTTAATTTGTGAAAAA 58.797 29.630 0.00 0.00 0.00 1.94
7430 7701 8.836268 TGTTAAGTAGGTTTTATATATGCCGG 57.164 34.615 0.00 0.00 0.00 6.13
7431 7702 8.431222 TGTTAAGTAGGTTTTATATATGCCGGT 58.569 33.333 1.90 0.00 0.00 5.28
7432 7703 9.276590 GTTAAGTAGGTTTTATATATGCCGGTT 57.723 33.333 1.90 0.00 0.00 4.44
7435 7706 9.850198 AAGTAGGTTTTATATATGCCGGTTAAA 57.150 29.630 1.90 0.00 0.00 1.52
7436 7707 9.850198 AGTAGGTTTTATATATGCCGGTTAAAA 57.150 29.630 1.90 2.41 0.00 1.52
7438 7709 8.983702 AGGTTTTATATATGCCGGTTAAAAGA 57.016 30.769 1.90 0.00 0.00 2.52
7439 7710 9.582648 AGGTTTTATATATGCCGGTTAAAAGAT 57.417 29.630 1.90 0.00 0.00 2.40
7448 7719 7.633193 ATGCCGGTTAAAAGATATGTTTACA 57.367 32.000 1.90 0.00 0.00 2.41
7449 7720 7.450124 TGCCGGTTAAAAGATATGTTTACAA 57.550 32.000 1.90 0.00 0.00 2.41
7450 7721 7.306953 TGCCGGTTAAAAGATATGTTTACAAC 58.693 34.615 1.90 11.41 0.00 3.32
7451 7722 7.175293 TGCCGGTTAAAAGATATGTTTACAACT 59.825 33.333 1.90 0.00 0.00 3.16
7452 7723 8.024865 GCCGGTTAAAAGATATGTTTACAACTT 58.975 33.333 1.90 0.00 0.00 2.66
7529 7800 9.581099 ACTTAGAACTTGTTTATTTGGTGTTTG 57.419 29.630 0.00 0.00 0.00 2.93
7559 7830 0.251698 TTCCCAGTTGATGCATGGCA 60.252 50.000 2.46 0.00 44.86 4.92
7599 7870 4.133078 GTGAGCAATCTTATCCCTCTTGG 58.867 47.826 0.00 0.00 0.00 3.61
7600 7871 3.145286 GAGCAATCTTATCCCTCTTGGC 58.855 50.000 0.00 0.00 0.00 4.52
7601 7872 2.782341 AGCAATCTTATCCCTCTTGGCT 59.218 45.455 0.00 0.00 0.00 4.75
7602 7873 3.145286 GCAATCTTATCCCTCTTGGCTC 58.855 50.000 0.00 0.00 0.00 4.70
7603 7874 3.181446 GCAATCTTATCCCTCTTGGCTCT 60.181 47.826 0.00 0.00 0.00 4.09
7604 7875 4.688321 GCAATCTTATCCCTCTTGGCTCTT 60.688 45.833 0.00 0.00 0.00 2.85
7605 7876 4.703379 ATCTTATCCCTCTTGGCTCTTG 57.297 45.455 0.00 0.00 0.00 3.02
7606 7877 2.171448 TCTTATCCCTCTTGGCTCTTGC 59.829 50.000 0.00 0.00 38.76 4.01
7616 7887 2.359230 GCTCTTGCCCTCACGCTT 60.359 61.111 0.00 0.00 0.00 4.68
7617 7888 1.079127 GCTCTTGCCCTCACGCTTA 60.079 57.895 0.00 0.00 0.00 3.09
7618 7889 0.673644 GCTCTTGCCCTCACGCTTAA 60.674 55.000 0.00 0.00 0.00 1.85
7619 7890 1.808411 CTCTTGCCCTCACGCTTAAA 58.192 50.000 0.00 0.00 0.00 1.52
7620 7891 2.359900 CTCTTGCCCTCACGCTTAAAT 58.640 47.619 0.00 0.00 0.00 1.40
7621 7892 3.531538 CTCTTGCCCTCACGCTTAAATA 58.468 45.455 0.00 0.00 0.00 1.40
7622 7893 3.531538 TCTTGCCCTCACGCTTAAATAG 58.468 45.455 0.00 0.00 0.00 1.73
7623 7894 3.055385 TCTTGCCCTCACGCTTAAATAGT 60.055 43.478 0.00 0.00 0.00 2.12
7624 7895 4.160814 TCTTGCCCTCACGCTTAAATAGTA 59.839 41.667 0.00 0.00 0.00 1.82
7625 7896 4.054780 TGCCCTCACGCTTAAATAGTAG 57.945 45.455 0.00 0.00 0.00 2.57
7626 7897 2.801111 GCCCTCACGCTTAAATAGTAGC 59.199 50.000 0.00 0.00 0.00 3.58
7627 7898 3.391049 CCCTCACGCTTAAATAGTAGCC 58.609 50.000 0.00 0.00 33.86 3.93
7628 7899 3.050619 CCTCACGCTTAAATAGTAGCCG 58.949 50.000 0.00 0.00 33.86 5.52
7629 7900 3.490419 CCTCACGCTTAAATAGTAGCCGT 60.490 47.826 0.00 0.00 33.86 5.68
7630 7901 4.110482 CTCACGCTTAAATAGTAGCCGTT 58.890 43.478 0.00 0.00 33.86 4.44
7631 7902 4.107622 TCACGCTTAAATAGTAGCCGTTC 58.892 43.478 0.00 0.00 33.86 3.95
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.663815 GAGCGGAGGGAGGTGGAGA 62.664 68.421 0.00 0.00 0.00 3.71
2 3 3.663815 GAGAGCGGAGGGAGGTGGA 62.664 68.421 0.00 0.00 0.00 4.02
5 6 2.277404 GAGAGAGCGGAGGGAGGT 59.723 66.667 0.00 0.00 0.00 3.85
8 9 2.190843 CGAGAGAGAGCGGAGGGA 59.809 66.667 0.00 0.00 0.00 4.20
19 20 2.601666 AGCTGTGGTGCCGAGAGA 60.602 61.111 0.00 0.00 0.00 3.10
26 27 3.720193 CGCTGTCAGCTGTGGTGC 61.720 66.667 22.13 12.70 39.60 5.01
33 42 4.792648 GCTCGCTCGCTGTCAGCT 62.793 66.667 22.13 0.00 39.60 4.24
102 116 0.179119 TTTAGCGAGGAGTTAGCGGC 60.179 55.000 0.00 0.00 35.78 6.53
486 536 1.456705 GGGGAGGAGAGTGCGAGAT 60.457 63.158 0.00 0.00 0.00 2.75
487 537 1.279749 TAGGGGAGGAGAGTGCGAGA 61.280 60.000 0.00 0.00 0.00 4.04
488 538 1.104577 GTAGGGGAGGAGAGTGCGAG 61.105 65.000 0.00 0.00 0.00 5.03
503 553 2.685897 CTCGTGGAGGAAGAAGAGTAGG 59.314 54.545 0.00 0.00 0.00 3.18
506 560 2.296073 ACTCGTGGAGGAAGAAGAGT 57.704 50.000 0.00 0.00 33.35 3.24
527 581 0.614979 CCTCGGTCCAAGGAGAAGGA 60.615 60.000 0.00 0.00 35.83 3.36
529 583 1.617947 CCCCTCGGTCCAAGGAGAAG 61.618 65.000 0.00 0.00 35.83 2.85
531 585 2.038975 CCCCTCGGTCCAAGGAGA 59.961 66.667 0.00 0.00 35.83 3.71
532 586 3.787001 GCCCCTCGGTCCAAGGAG 61.787 72.222 0.00 0.00 35.83 3.69
563 617 4.688879 ACGACTGCGAATTCAACTGAATAA 59.311 37.500 6.22 0.00 41.25 1.40
630 692 3.292936 CCGACCCCCGAGATACCG 61.293 72.222 0.00 0.00 41.76 4.02
631 693 2.916181 CCCGACCCCCGAGATACC 60.916 72.222 0.00 0.00 41.76 2.73
808 871 6.137794 TGCGTTGTTTTTATGAGGAAAGAA 57.862 33.333 0.00 0.00 0.00 2.52
928 994 7.175797 TCTTTTCTAGGACTGATGACTGACTA 58.824 38.462 0.00 0.00 0.00 2.59
937 1003 8.406297 GTGTTGTTTTTCTTTTCTAGGACTGAT 58.594 33.333 0.00 0.00 0.00 2.90
957 1026 3.222354 GACTCTCCGCCGGTGTTGT 62.222 63.158 15.14 6.69 0.00 3.32
958 1027 2.432628 GACTCTCCGCCGGTGTTG 60.433 66.667 15.14 6.20 0.00 3.33
959 1028 1.755393 AAAGACTCTCCGCCGGTGTT 61.755 55.000 15.14 0.00 0.00 3.32
960 1029 2.207924 AAAGACTCTCCGCCGGTGT 61.208 57.895 15.14 0.43 0.00 4.16
964 1033 0.734253 CAGACAAAGACTCTCCGCCG 60.734 60.000 0.00 0.00 0.00 6.46
966 1035 1.704070 GACAGACAAAGACTCTCCGC 58.296 55.000 0.00 0.00 0.00 5.54
970 1039 4.657436 AGAAACGACAGACAAAGACTCT 57.343 40.909 0.00 0.00 0.00 3.24
990 1059 2.350007 GCCGAAGCTCATCTACGACTAG 60.350 54.545 0.00 0.00 35.50 2.57
991 1060 1.602851 GCCGAAGCTCATCTACGACTA 59.397 52.381 0.00 0.00 35.50 2.59
992 1061 0.382515 GCCGAAGCTCATCTACGACT 59.617 55.000 0.00 0.00 35.50 4.18
1155 1224 4.095400 AGGGAGAGGCCGGTGGAT 62.095 66.667 1.90 0.00 37.63 3.41
1183 1252 0.248907 CGGGTGGTAGTATCACAGCG 60.249 60.000 15.36 0.00 36.90 5.18
1187 1256 1.444672 GGCCGGGTGGTAGTATCAC 59.555 63.158 2.18 4.87 37.67 3.06
1189 1258 1.679559 AACGGCCGGGTGGTAGTATC 61.680 60.000 31.76 0.00 37.67 2.24
1228 1301 6.921307 CCGATTAATTAAGGCCAATAAACACC 59.079 38.462 5.01 0.00 0.00 4.16
1285 1373 7.217636 GCTAATTAAAACCGAGGAAAATCGAAC 59.782 37.037 0.00 0.00 45.56 3.95
1288 1376 6.548171 TGCTAATTAAAACCGAGGAAAATCG 58.452 36.000 0.00 0.00 42.36 3.34
1295 1383 4.178540 TCGTCTGCTAATTAAAACCGAGG 58.821 43.478 0.00 0.00 0.00 4.63
1296 1384 5.119588 TGTTCGTCTGCTAATTAAAACCGAG 59.880 40.000 0.00 0.00 0.00 4.63
1301 1389 6.093495 CCTCCATGTTCGTCTGCTAATTAAAA 59.907 38.462 0.00 0.00 0.00 1.52
1343 1431 2.045045 CTCCCCATGAAAGCGCCA 60.045 61.111 2.29 0.00 0.00 5.69
1571 1662 4.027437 AGGGCTAGAAAGTAGACCAAGAG 58.973 47.826 6.70 0.00 45.29 2.85
1599 1694 0.869068 CACGTACGCACCCAAAATGA 59.131 50.000 16.72 0.00 0.00 2.57
1602 1697 0.743701 ACACACGTACGCACCCAAAA 60.744 50.000 16.72 0.00 0.00 2.44
1603 1698 1.153409 ACACACGTACGCACCCAAA 60.153 52.632 16.72 0.00 0.00 3.28
1607 1702 3.708734 GCCACACACGTACGCACC 61.709 66.667 16.72 0.00 0.00 5.01
1608 1703 4.054455 CGCCACACACGTACGCAC 62.054 66.667 16.72 0.00 0.00 5.34
1611 1706 3.762992 CTGCGCCACACACGTACG 61.763 66.667 15.01 15.01 0.00 3.67
1612 1707 4.072088 GCTGCGCCACACACGTAC 62.072 66.667 4.18 0.00 0.00 3.67
1618 1713 4.666532 GAACACGCTGCGCCACAC 62.667 66.667 23.51 6.52 0.00 3.82
1620 1715 3.862063 CTTGAACACGCTGCGCCAC 62.862 63.158 23.51 11.62 0.00 5.01
1695 1792 3.997064 CTTGACCTGGCGGCTCTCG 62.997 68.421 11.43 0.00 42.76 4.04
1737 1834 1.338200 ACAGTCCGAACCTTCATCTGC 60.338 52.381 0.00 0.00 0.00 4.26
1767 1864 6.599638 ACCAAAGATACTTAGATTGTTCTGGC 59.400 38.462 0.00 0.00 33.17 4.85
1769 1866 7.119699 TGCACCAAAGATACTTAGATTGTTCTG 59.880 37.037 0.00 0.00 33.17 3.02
1779 1876 3.000041 CACGCTGCACCAAAGATACTTA 59.000 45.455 0.00 0.00 0.00 2.24
1781 1878 1.270839 ACACGCTGCACCAAAGATACT 60.271 47.619 0.00 0.00 0.00 2.12
1782 1879 1.128692 GACACGCTGCACCAAAGATAC 59.871 52.381 0.00 0.00 0.00 2.24
1796 1900 1.218875 TGTCACATCAACCGACACGC 61.219 55.000 0.00 0.00 34.83 5.34
1863 1967 2.203480 GCAACCAACCCAGCCAGA 60.203 61.111 0.00 0.00 0.00 3.86
1864 1968 2.521465 TGCAACCAACCCAGCCAG 60.521 61.111 0.00 0.00 0.00 4.85
1865 1969 2.521465 CTGCAACCAACCCAGCCA 60.521 61.111 0.00 0.00 0.00 4.75
1866 1970 2.203480 TCTGCAACCAACCCAGCC 60.203 61.111 0.00 0.00 0.00 4.85
1867 1971 2.908073 CGTCTGCAACCAACCCAGC 61.908 63.158 0.00 0.00 0.00 4.85
2353 2462 4.845580 AGCTCCTCCATTGCCGCG 62.846 66.667 0.00 0.00 0.00 6.46
2769 2878 1.134670 GCGTGGAGCTAGGATGAAACT 60.135 52.381 0.00 0.00 44.04 2.66
2771 2880 3.760693 GCGTGGAGCTAGGATGAAA 57.239 52.632 0.00 0.00 44.04 2.69
2811 2920 1.070309 CGTCAGCAAGTGAGCTCAAAC 60.070 52.381 20.19 7.16 44.54 2.93
2812 2921 1.220529 CGTCAGCAAGTGAGCTCAAA 58.779 50.000 20.19 0.00 44.54 2.69
2821 2930 1.557443 GCAGCGTAACGTCAGCAAGT 61.557 55.000 11.46 0.00 0.00 3.16
2824 2933 1.300620 AAGCAGCGTAACGTCAGCA 60.301 52.632 11.46 0.00 0.00 4.41
2825 2934 1.130613 CAAGCAGCGTAACGTCAGC 59.869 57.895 0.00 0.00 0.00 4.26
2882 3011 2.052690 CGTCACCTCCCTGATCGGT 61.053 63.158 0.00 0.00 0.00 4.69
3143 3287 4.899239 GCCGATGGAGCAGGACGG 62.899 72.222 0.00 0.00 45.26 4.79
3155 3299 3.599704 GTAGGTACGCCGGCCGAT 61.600 66.667 30.73 14.61 41.02 4.18
3232 3392 4.889856 CCGCCACATGCCGATCGA 62.890 66.667 18.66 0.00 36.24 3.59
3306 3466 0.830444 AGCATAGAATACCGGGCCGA 60.830 55.000 30.79 9.12 0.00 5.54
3327 3490 2.742710 TTCGTCCACGTCCTTCTGCG 62.743 60.000 0.00 0.00 40.80 5.18
3328 3491 1.006571 TTCGTCCACGTCCTTCTGC 60.007 57.895 0.00 0.00 40.80 4.26
3365 3529 3.708220 GACTTGAGCGAGGAGGCCG 62.708 68.421 0.00 0.00 0.00 6.13
3366 3530 2.172483 TTGACTTGAGCGAGGAGGCC 62.172 60.000 0.00 0.00 0.00 5.19
3367 3531 0.107945 ATTGACTTGAGCGAGGAGGC 60.108 55.000 0.00 0.00 0.00 4.70
3369 3533 1.005340 GCATTGACTTGAGCGAGGAG 58.995 55.000 0.00 0.00 0.00 3.69
3370 3534 0.610174 AGCATTGACTTGAGCGAGGA 59.390 50.000 0.00 0.00 0.00 3.71
3371 3535 1.005340 GAGCATTGACTTGAGCGAGG 58.995 55.000 0.00 0.00 0.00 4.63
3372 3536 1.925847 GAGAGCATTGACTTGAGCGAG 59.074 52.381 0.00 0.00 0.00 5.03
3373 3537 1.733718 CGAGAGCATTGACTTGAGCGA 60.734 52.381 0.00 0.00 0.00 4.93
3374 3538 0.644331 CGAGAGCATTGACTTGAGCG 59.356 55.000 0.00 0.00 0.00 5.03
3375 3539 1.658095 GACGAGAGCATTGACTTGAGC 59.342 52.381 0.00 0.00 0.00 4.26
3376 3540 3.229276 AGACGAGAGCATTGACTTGAG 57.771 47.619 0.00 0.00 0.00 3.02
3377 3541 3.243873 ACAAGACGAGAGCATTGACTTGA 60.244 43.478 20.23 0.00 43.64 3.02
3420 3584 4.851114 CTATGCACGCACGCACGC 62.851 66.667 0.00 0.00 46.56 5.34
3421 3585 4.208948 CCTATGCACGCACGCACG 62.209 66.667 0.00 0.00 46.56 5.34
3467 3631 1.135803 CGAAAACAATGGCGATCGGTT 60.136 47.619 18.30 9.02 0.00 4.44
3470 3634 0.096976 AGCGAAAACAATGGCGATCG 59.903 50.000 11.69 11.69 0.00 3.69
3494 3658 1.070445 TGAAAATTGGGTGCCTGCTTG 59.930 47.619 0.00 0.00 0.00 4.01
3495 3659 1.422531 TGAAAATTGGGTGCCTGCTT 58.577 45.000 0.00 0.00 0.00 3.91
3500 3664 2.908688 ACAGTTGAAAATTGGGTGCC 57.091 45.000 0.00 0.00 37.94 5.01
3501 3665 3.245048 CGAAACAGTTGAAAATTGGGTGC 59.755 43.478 0.00 0.00 37.94 5.01
3502 3666 4.677584 TCGAAACAGTTGAAAATTGGGTG 58.322 39.130 0.00 0.00 37.94 4.61
3503 3667 4.993029 TCGAAACAGTTGAAAATTGGGT 57.007 36.364 0.00 0.00 37.94 4.51
3504 3668 4.150451 GCATCGAAACAGTTGAAAATTGGG 59.850 41.667 0.00 0.00 37.94 4.12
3505 3669 4.984161 AGCATCGAAACAGTTGAAAATTGG 59.016 37.500 0.00 0.00 37.94 3.16
3544 3708 4.160635 CATTTCGGGCGCACGGAC 62.161 66.667 34.16 1.10 0.00 4.79
3548 3712 4.481112 CAGGCATTTCGGGCGCAC 62.481 66.667 10.83 3.71 38.57 5.34
3554 3718 1.412710 TCTACTAGCCAGGCATTTCGG 59.587 52.381 15.80 0.00 0.00 4.30
3572 3736 6.126739 GGAACCCTAAAATACTGGATCTGTCT 60.127 42.308 0.00 0.00 0.00 3.41
3623 3787 1.349259 GGTTGTACAGCGCGTAGTGG 61.349 60.000 8.43 0.00 39.19 4.00
3625 3789 1.080298 GGGTTGTACAGCGCGTAGT 60.080 57.895 8.43 9.53 0.00 2.73
3626 3790 0.668096 TTGGGTTGTACAGCGCGTAG 60.668 55.000 19.25 2.68 0.00 3.51
3627 3791 0.945265 GTTGGGTTGTACAGCGCGTA 60.945 55.000 19.25 4.75 0.00 4.42
3630 3794 1.076332 CTAGTTGGGTTGTACAGCGC 58.924 55.000 18.08 18.08 0.00 5.92
3631 3795 2.334838 GACTAGTTGGGTTGTACAGCG 58.665 52.381 3.46 0.00 0.00 5.18
3632 3796 2.038033 TGGACTAGTTGGGTTGTACAGC 59.962 50.000 0.27 0.27 0.00 4.40
3633 3797 3.864921 GCTGGACTAGTTGGGTTGTACAG 60.865 52.174 0.00 0.00 42.51 2.74
3634 3798 2.038033 GCTGGACTAGTTGGGTTGTACA 59.962 50.000 0.00 0.00 0.00 2.90
3635 3799 2.302157 AGCTGGACTAGTTGGGTTGTAC 59.698 50.000 0.00 0.00 0.00 2.90
3636 3800 2.616524 AGCTGGACTAGTTGGGTTGTA 58.383 47.619 0.00 0.00 0.00 2.41
3637 3801 1.435256 AGCTGGACTAGTTGGGTTGT 58.565 50.000 0.00 0.00 0.00 3.32
3638 3802 2.568623 AAGCTGGACTAGTTGGGTTG 57.431 50.000 0.00 0.00 0.00 3.77
3639 3803 4.288626 TGATTAAGCTGGACTAGTTGGGTT 59.711 41.667 0.00 5.24 0.00 4.11
3642 3806 5.235186 CGATTGATTAAGCTGGACTAGTTGG 59.765 44.000 0.00 0.00 0.00 3.77
3655 3819 5.368145 TGAATCCTCCCACGATTGATTAAG 58.632 41.667 0.00 0.00 30.08 1.85
3705 3874 5.344066 ACTGTGCTCGTCATTACTCATTAG 58.656 41.667 0.00 0.00 0.00 1.73
3853 4022 2.146519 CACGAGACGCGCAGTAGTG 61.147 63.158 5.73 12.94 46.04 2.74
3854 4023 2.126417 AACACGAGACGCGCAGTAGT 62.126 55.000 5.73 0.00 46.04 2.73
3855 4024 1.396543 GAACACGAGACGCGCAGTAG 61.397 60.000 5.73 4.56 46.04 2.57
3909 4078 1.034292 GCAACCAGAGGGAGATTGGC 61.034 60.000 0.00 0.00 38.05 4.52
3911 4080 0.250234 TCGCAACCAGAGGGAGATTG 59.750 55.000 0.00 0.00 38.05 2.67
4122 4298 3.945981 ACAAATTGCATGCATCACTCA 57.054 38.095 23.37 5.43 0.00 3.41
4123 4299 5.061311 GTGTAACAAATTGCATGCATCACTC 59.939 40.000 23.37 8.21 36.32 3.51
4131 4307 2.088816 CGTGCGTGTAACAAATTGCATG 59.911 45.455 0.00 0.00 39.64 4.06
4133 4309 1.747956 CGTGCGTGTAACAAATTGCA 58.252 45.000 0.00 0.00 35.74 4.08
4136 4312 0.384974 CGGCGTGCGTGTAACAAATT 60.385 50.000 0.00 0.00 35.74 1.82
4165 4341 7.474190 GCACAGTAGTAAAGAAGTAGGAGTAG 58.526 42.308 0.00 0.00 0.00 2.57
4170 4346 4.857588 CACGCACAGTAGTAAAGAAGTAGG 59.142 45.833 0.00 0.00 0.00 3.18
4171 4347 5.568296 GTCACGCACAGTAGTAAAGAAGTAG 59.432 44.000 0.00 0.00 0.00 2.57
4172 4348 5.455392 GTCACGCACAGTAGTAAAGAAGTA 58.545 41.667 0.00 0.00 0.00 2.24
4173 4349 4.296690 GTCACGCACAGTAGTAAAGAAGT 58.703 43.478 0.00 0.00 0.00 3.01
4174 4350 3.673809 GGTCACGCACAGTAGTAAAGAAG 59.326 47.826 0.00 0.00 0.00 2.85
4175 4351 3.068448 TGGTCACGCACAGTAGTAAAGAA 59.932 43.478 0.00 0.00 0.00 2.52
4176 4352 2.624364 TGGTCACGCACAGTAGTAAAGA 59.376 45.455 0.00 0.00 0.00 2.52
4177 4353 2.987149 CTGGTCACGCACAGTAGTAAAG 59.013 50.000 0.00 0.00 0.00 1.85
4178 4354 2.864882 GCTGGTCACGCACAGTAGTAAA 60.865 50.000 0.00 0.00 37.07 2.01
4179 4355 1.336517 GCTGGTCACGCACAGTAGTAA 60.337 52.381 0.00 0.00 37.07 2.24
4180 4356 0.242825 GCTGGTCACGCACAGTAGTA 59.757 55.000 0.00 0.00 37.07 1.82
4181 4357 1.006102 GCTGGTCACGCACAGTAGT 60.006 57.895 0.00 0.00 37.07 2.73
4285 4461 2.286872 CCTCTCATCGAATGCAGCTTT 58.713 47.619 0.00 0.00 0.00 3.51
4561 4738 3.823330 GCCAGCCTGAGCATGCAC 61.823 66.667 21.98 15.08 43.56 4.57
4939 5116 8.059798 AGGTATGATGTACTGTACTTACGTTT 57.940 34.615 17.98 1.35 0.00 3.60
4985 5162 3.648067 AGAAGGAACTGAGATGTGTGGAA 59.352 43.478 0.00 0.00 40.86 3.53
5233 5424 6.546034 TCATGCTAGTTCATGCTAGTACAGTA 59.454 38.462 8.58 0.00 42.58 2.74
5275 5466 3.607741 CAACCCATGCATTTGCCAATAA 58.392 40.909 0.00 0.00 41.18 1.40
5389 5580 8.732746 ATCACAAATGTCAACCCTACTAATAC 57.267 34.615 0.00 0.00 0.00 1.89
5392 5583 8.141298 TCTATCACAAATGTCAACCCTACTAA 57.859 34.615 0.00 0.00 0.00 2.24
5425 5616 7.107639 TCAAAAAGGAGGGAAAAGTTAACAG 57.892 36.000 8.61 0.00 0.00 3.16
5426 5617 6.666113 ACTCAAAAAGGAGGGAAAAGTTAACA 59.334 34.615 8.61 0.00 39.27 2.41
5428 5619 7.727578 AACTCAAAAAGGAGGGAAAAGTTAA 57.272 32.000 0.00 0.00 39.27 2.01
5430 5621 6.212589 TGAAACTCAAAAAGGAGGGAAAAGTT 59.787 34.615 0.00 0.00 39.27 2.66
5431 5622 5.719563 TGAAACTCAAAAAGGAGGGAAAAGT 59.280 36.000 0.00 0.00 39.27 2.66
5432 5623 6.220726 TGAAACTCAAAAAGGAGGGAAAAG 57.779 37.500 0.00 0.00 39.27 2.27
5433 5624 6.613153 TTGAAACTCAAAAAGGAGGGAAAA 57.387 33.333 0.00 0.00 39.27 2.29
5434 5625 6.613153 TTTGAAACTCAAAAAGGAGGGAAA 57.387 33.333 0.00 0.00 42.72 3.13
5540 5731 1.509923 GCAGGCTTTGGTGAGCATC 59.490 57.895 0.00 0.00 44.49 3.91
5558 5749 8.286191 AGAAGAAAGAATAAAGCCAATACTGG 57.714 34.615 0.00 0.00 46.65 4.00
5588 5779 7.108847 ACTCCTCATGGATCTTTGAAAAGTAG 58.891 38.462 2.88 0.00 42.29 2.57
5609 5800 8.889717 TCAAATAACGGATGAAAAAGATACTCC 58.110 33.333 0.00 0.00 0.00 3.85
5794 6018 8.855110 TGTATTAGCAATTTTGGAGAAAACTGA 58.145 29.630 0.00 0.00 31.31 3.41
5827 6051 3.082548 GGAGGTCTTAAAAAGAGTGGCC 58.917 50.000 0.00 0.00 38.41 5.36
5889 6114 6.476706 GCAGCTCAAATTGAACTGTAAAAACT 59.523 34.615 22.51 0.00 41.34 2.66
5952 6177 6.312918 TGTTAAATTTGCTTGCGGTACAAAAA 59.687 30.769 0.00 0.00 37.96 1.94
5953 6178 5.810587 TGTTAAATTTGCTTGCGGTACAAAA 59.189 32.000 0.00 0.00 37.96 2.44
5966 6191 6.142958 GCTCTCTTTCACTGTGTTAAATTTGC 59.857 38.462 7.79 2.14 0.00 3.68
5988 6213 3.687572 AGATCGTGCATTCAATTGCTC 57.312 42.857 0.00 0.00 43.18 4.26
6010 6235 8.628280 GGAGTGGTTCGAATTATAACTAGTAGT 58.372 37.037 0.00 0.00 0.00 2.73
6011 6236 8.848182 AGGAGTGGTTCGAATTATAACTAGTAG 58.152 37.037 0.00 0.00 0.00 2.57
6155 6381 6.094881 GCCAGCAGGAAATTATACTTGTACAA 59.905 38.462 8.28 8.28 36.89 2.41
6156 6382 5.588648 GCCAGCAGGAAATTATACTTGTACA 59.411 40.000 0.00 0.00 36.89 2.90
6169 6395 0.323999 ATGCATCAGCCAGCAGGAAA 60.324 50.000 0.00 0.00 44.94 3.13
6410 6636 2.600769 AGAAGGGTCAGTCGCGGT 60.601 61.111 6.13 0.00 0.00 5.68
6415 6641 1.268283 CCTGGGGAGAAGGGTCAGTC 61.268 65.000 0.00 0.00 0.00 3.51
6456 6682 3.136345 TTGTTGTTGCTGCTGCCGG 62.136 57.895 13.47 0.00 38.71 6.13
6499 6725 3.927142 GGTTGTTGACGAGTATCTGGAAG 59.073 47.826 0.00 0.00 0.00 3.46
6604 6830 1.153025 GATGATGCTGGCCTGCAGA 60.153 57.895 35.89 26.69 46.71 4.26
6754 6986 5.474825 ACTCGTCTGAAATCTTCTTCTTCC 58.525 41.667 0.00 0.00 0.00 3.46
6763 7004 3.936372 TCCGAAACTCGTCTGAAATCT 57.064 42.857 0.00 0.00 38.40 2.40
6764 7005 4.174009 TGATCCGAAACTCGTCTGAAATC 58.826 43.478 0.00 0.00 38.40 2.17
6765 7006 4.188247 TGATCCGAAACTCGTCTGAAAT 57.812 40.909 0.00 0.00 38.40 2.17
6766 7007 3.653539 TGATCCGAAACTCGTCTGAAA 57.346 42.857 0.00 0.00 38.40 2.69
6767 7008 3.192633 TGATGATCCGAAACTCGTCTGAA 59.807 43.478 0.00 0.00 38.40 3.02
6768 7009 2.752903 TGATGATCCGAAACTCGTCTGA 59.247 45.455 0.00 0.00 38.40 3.27
6769 7010 3.150848 TGATGATCCGAAACTCGTCTG 57.849 47.619 0.00 0.00 38.40 3.51
6770 7011 4.557695 GCTATGATGATCCGAAACTCGTCT 60.558 45.833 0.00 0.00 38.40 4.18
6773 7014 2.658802 CGCTATGATGATCCGAAACTCG 59.341 50.000 0.00 0.00 40.07 4.18
6774 7015 2.989840 CCGCTATGATGATCCGAAACTC 59.010 50.000 0.00 0.00 0.00 3.01
6776 7017 1.461127 GCCGCTATGATGATCCGAAAC 59.539 52.381 0.00 0.00 0.00 2.78
6777 7018 1.344438 AGCCGCTATGATGATCCGAAA 59.656 47.619 0.00 0.00 0.00 3.46
6793 7034 5.828299 TTTATTTGTATCCCAAGAAGCCG 57.172 39.130 0.00 0.00 33.75 5.52
6821 7062 6.294564 GCGATACTAATTCCATCTCCACACTA 60.295 42.308 0.00 0.00 0.00 2.74
6822 7063 5.509840 GCGATACTAATTCCATCTCCACACT 60.510 44.000 0.00 0.00 0.00 3.55
6833 7074 8.035394 TCATTTCCTCTATGCGATACTAATTCC 58.965 37.037 0.00 0.00 0.00 3.01
6844 7085 1.867233 CCCGTTCATTTCCTCTATGCG 59.133 52.381 0.00 0.00 0.00 4.73
6845 7086 2.222027 CCCCGTTCATTTCCTCTATGC 58.778 52.381 0.00 0.00 0.00 3.14
6878 7119 4.392138 GGTTCGTTCTTGACTTAATCCCTG 59.608 45.833 0.00 0.00 0.00 4.45
6918 7159 3.180189 CAGCGGCAAATAATAAACATGCG 59.820 43.478 1.45 0.00 37.88 4.73
6923 7164 6.530181 AGTTTAAGCAGCGGCAAATAATAAAC 59.470 34.615 12.44 14.34 44.61 2.01
6926 7167 5.828299 AGTTTAAGCAGCGGCAAATAATA 57.172 34.783 12.44 0.00 44.61 0.98
6927 7168 4.718940 AGTTTAAGCAGCGGCAAATAAT 57.281 36.364 12.44 0.00 44.61 1.28
6928 7169 4.438200 GCTAGTTTAAGCAGCGGCAAATAA 60.438 41.667 12.44 4.72 44.61 1.40
6929 7170 3.064820 GCTAGTTTAAGCAGCGGCAAATA 59.935 43.478 12.44 0.00 44.61 1.40
7054 7300 7.166691 AGCTTCACAGAAGAATGCATTAATT 57.833 32.000 12.97 10.44 0.00 1.40
7065 7311 3.324846 TGCCTAGAAAGCTTCACAGAAGA 59.675 43.478 10.72 0.00 0.00 2.87
7151 7422 8.256605 TGTATATGAACCCATTCCAACATTTTG 58.743 33.333 0.00 0.00 33.49 2.44
7179 7450 3.817084 ACCACAGATCAGAACACAACATG 59.183 43.478 0.00 0.00 0.00 3.21
7188 7459 4.346709 TGACTAAACCACCACAGATCAGAA 59.653 41.667 0.00 0.00 0.00 3.02
7190 7461 4.271696 TGACTAAACCACCACAGATCAG 57.728 45.455 0.00 0.00 0.00 2.90
7192 7463 5.360591 CCTATGACTAAACCACCACAGATC 58.639 45.833 0.00 0.00 0.00 2.75
7193 7464 4.384208 GCCTATGACTAAACCACCACAGAT 60.384 45.833 0.00 0.00 0.00 2.90
7196 7467 2.910319 AGCCTATGACTAAACCACCACA 59.090 45.455 0.00 0.00 0.00 4.17
7197 7468 3.629142 AGCCTATGACTAAACCACCAC 57.371 47.619 0.00 0.00 0.00 4.16
7198 7469 4.781087 AGTAAGCCTATGACTAAACCACCA 59.219 41.667 0.00 0.00 0.00 4.17
7199 7470 5.105064 TGAGTAAGCCTATGACTAAACCACC 60.105 44.000 0.00 0.00 0.00 4.61
7200 7471 5.811100 GTGAGTAAGCCTATGACTAAACCAC 59.189 44.000 0.00 0.00 0.00 4.16
7202 7473 5.974108 TGTGAGTAAGCCTATGACTAAACC 58.026 41.667 0.00 0.00 0.00 3.27
7203 7474 7.493367 AGATGTGAGTAAGCCTATGACTAAAC 58.507 38.462 0.00 0.00 0.00 2.01
7205 7476 7.561722 AGAAGATGTGAGTAAGCCTATGACTAA 59.438 37.037 0.00 0.00 0.00 2.24
7206 7477 7.063593 AGAAGATGTGAGTAAGCCTATGACTA 58.936 38.462 0.00 0.00 0.00 2.59
7209 7480 6.381133 TCAAGAAGATGTGAGTAAGCCTATGA 59.619 38.462 0.00 0.00 0.00 2.15
7210 7481 6.577103 TCAAGAAGATGTGAGTAAGCCTATG 58.423 40.000 0.00 0.00 0.00 2.23
7212 7483 6.211584 AGTTCAAGAAGATGTGAGTAAGCCTA 59.788 38.462 0.00 0.00 0.00 3.93
7214 7485 5.241662 AGTTCAAGAAGATGTGAGTAAGCC 58.758 41.667 0.00 0.00 0.00 4.35
7215 7486 6.793492 AAGTTCAAGAAGATGTGAGTAAGC 57.207 37.500 0.00 0.00 0.00 3.09
7262 7533 4.213564 TGGTGCAATTTGACCTGTTTTT 57.786 36.364 14.81 0.00 32.98 1.94
7263 7534 3.902881 TGGTGCAATTTGACCTGTTTT 57.097 38.095 14.81 0.00 32.98 2.43
7264 7535 3.134442 ACATGGTGCAATTTGACCTGTTT 59.866 39.130 14.81 1.32 32.98 2.83
7265 7536 2.699846 ACATGGTGCAATTTGACCTGTT 59.300 40.909 14.81 3.22 32.98 3.16
7266 7537 2.036217 CACATGGTGCAATTTGACCTGT 59.964 45.455 14.81 13.28 32.98 4.00
7267 7538 2.610976 CCACATGGTGCAATTTGACCTG 60.611 50.000 14.81 12.88 32.98 4.00
7268 7539 1.619827 CCACATGGTGCAATTTGACCT 59.380 47.619 14.81 3.60 32.98 3.85
7269 7540 1.617850 TCCACATGGTGCAATTTGACC 59.382 47.619 0.00 5.92 36.34 4.02
7270 7541 2.297033 AGTCCACATGGTGCAATTTGAC 59.703 45.455 0.00 0.00 36.34 3.18
7271 7542 2.596346 AGTCCACATGGTGCAATTTGA 58.404 42.857 0.00 0.00 36.34 2.69
7272 7543 3.389925 AAGTCCACATGGTGCAATTTG 57.610 42.857 0.00 0.00 36.34 2.32
7273 7544 3.134442 ACAAAGTCCACATGGTGCAATTT 59.866 39.130 0.00 0.00 36.34 1.82
7274 7545 2.699846 ACAAAGTCCACATGGTGCAATT 59.300 40.909 0.00 0.00 36.34 2.32
7275 7546 2.297033 GACAAAGTCCACATGGTGCAAT 59.703 45.455 0.00 0.00 36.34 3.56
7276 7547 1.680735 GACAAAGTCCACATGGTGCAA 59.319 47.619 0.00 0.00 36.34 4.08
7277 7548 1.133823 AGACAAAGTCCACATGGTGCA 60.134 47.619 0.00 0.00 36.34 4.57
7278 7549 1.609208 AGACAAAGTCCACATGGTGC 58.391 50.000 0.00 0.00 36.34 5.01
7279 7550 3.127548 GCATAGACAAAGTCCACATGGTG 59.872 47.826 0.00 0.00 36.34 4.17
7280 7551 3.244875 TGCATAGACAAAGTCCACATGGT 60.245 43.478 0.00 0.00 36.34 3.55
7281 7552 3.346315 TGCATAGACAAAGTCCACATGG 58.654 45.455 0.00 0.00 32.18 3.66
7282 7553 6.872628 ATATGCATAGACAAAGTCCACATG 57.127 37.500 12.79 0.00 32.18 3.21
7283 7554 8.377799 TCATATATGCATAGACAAAGTCCACAT 58.622 33.333 12.79 0.00 32.18 3.21
7284 7555 7.657354 GTCATATATGCATAGACAAAGTCCACA 59.343 37.037 12.79 0.00 32.18 4.17
7285 7556 7.875041 AGTCATATATGCATAGACAAAGTCCAC 59.125 37.037 20.52 5.34 32.18 4.02
7286 7557 7.966812 AGTCATATATGCATAGACAAAGTCCA 58.033 34.615 20.52 0.00 32.18 4.02
7287 7558 8.839310 AAGTCATATATGCATAGACAAAGTCC 57.161 34.615 20.52 2.39 32.18 3.85
7315 7586 8.633561 GCTTCCTATGCCACTAAATAAGAAAAT 58.366 33.333 0.00 0.00 0.00 1.82
7316 7587 7.613801 TGCTTCCTATGCCACTAAATAAGAAAA 59.386 33.333 0.00 0.00 0.00 2.29
7317 7588 7.116075 TGCTTCCTATGCCACTAAATAAGAAA 58.884 34.615 0.00 0.00 0.00 2.52
7318 7589 6.658849 TGCTTCCTATGCCACTAAATAAGAA 58.341 36.000 0.00 0.00 0.00 2.52
7319 7590 6.247229 TGCTTCCTATGCCACTAAATAAGA 57.753 37.500 0.00 0.00 0.00 2.10
7320 7591 5.471456 CCTGCTTCCTATGCCACTAAATAAG 59.529 44.000 0.00 0.00 0.00 1.73
7321 7592 5.104109 ACCTGCTTCCTATGCCACTAAATAA 60.104 40.000 0.00 0.00 0.00 1.40
7322 7593 4.412199 ACCTGCTTCCTATGCCACTAAATA 59.588 41.667 0.00 0.00 0.00 1.40
7323 7594 3.203040 ACCTGCTTCCTATGCCACTAAAT 59.797 43.478 0.00 0.00 0.00 1.40
7324 7595 2.576191 ACCTGCTTCCTATGCCACTAAA 59.424 45.455 0.00 0.00 0.00 1.85
7325 7596 2.170607 GACCTGCTTCCTATGCCACTAA 59.829 50.000 0.00 0.00 0.00 2.24
7326 7597 1.762957 GACCTGCTTCCTATGCCACTA 59.237 52.381 0.00 0.00 0.00 2.74
7327 7598 0.543749 GACCTGCTTCCTATGCCACT 59.456 55.000 0.00 0.00 0.00 4.00
7328 7599 0.253044 TGACCTGCTTCCTATGCCAC 59.747 55.000 0.00 0.00 0.00 5.01
7329 7600 0.991146 TTGACCTGCTTCCTATGCCA 59.009 50.000 0.00 0.00 0.00 4.92
7330 7601 2.128771 TTTGACCTGCTTCCTATGCC 57.871 50.000 0.00 0.00 0.00 4.40
7331 7602 4.082026 ACAATTTTGACCTGCTTCCTATGC 60.082 41.667 0.00 0.00 0.00 3.14
7332 7603 5.649782 ACAATTTTGACCTGCTTCCTATG 57.350 39.130 0.00 0.00 0.00 2.23
7333 7604 6.245408 TGTACAATTTTGACCTGCTTCCTAT 58.755 36.000 0.00 0.00 0.00 2.57
7334 7605 5.626142 TGTACAATTTTGACCTGCTTCCTA 58.374 37.500 0.00 0.00 0.00 2.94
7335 7606 4.469657 TGTACAATTTTGACCTGCTTCCT 58.530 39.130 0.00 0.00 0.00 3.36
7336 7607 4.846779 TGTACAATTTTGACCTGCTTCC 57.153 40.909 0.00 0.00 0.00 3.46
7337 7608 7.147976 AGAAATGTACAATTTTGACCTGCTTC 58.852 34.615 0.00 0.00 0.00 3.86
7338 7609 7.054491 AGAAATGTACAATTTTGACCTGCTT 57.946 32.000 0.00 0.00 0.00 3.91
7339 7610 6.655078 AGAAATGTACAATTTTGACCTGCT 57.345 33.333 0.00 0.00 0.00 4.24
7340 7611 8.986477 ATAAGAAATGTACAATTTTGACCTGC 57.014 30.769 0.00 0.00 0.00 4.85
7345 7616 9.638239 GCCTGAATAAGAAATGTACAATTTTGA 57.362 29.630 0.00 0.00 0.00 2.69
7346 7617 8.872845 GGCCTGAATAAGAAATGTACAATTTTG 58.127 33.333 0.00 0.00 0.00 2.44
7347 7618 8.815912 AGGCCTGAATAAGAAATGTACAATTTT 58.184 29.630 3.11 0.00 0.00 1.82
7348 7619 8.366359 AGGCCTGAATAAGAAATGTACAATTT 57.634 30.769 3.11 1.24 0.00 1.82
7349 7620 7.961326 AGGCCTGAATAAGAAATGTACAATT 57.039 32.000 3.11 0.00 0.00 2.32
7350 7621 7.721399 CCTAGGCCTGAATAAGAAATGTACAAT 59.279 37.037 17.99 0.00 0.00 2.71
7351 7622 7.054124 CCTAGGCCTGAATAAGAAATGTACAA 58.946 38.462 17.99 0.00 0.00 2.41
7352 7623 6.157994 ACCTAGGCCTGAATAAGAAATGTACA 59.842 38.462 17.99 0.00 0.00 2.90
7353 7624 6.483640 CACCTAGGCCTGAATAAGAAATGTAC 59.516 42.308 17.99 0.00 0.00 2.90
7354 7625 6.385759 TCACCTAGGCCTGAATAAGAAATGTA 59.614 38.462 17.99 0.00 0.00 2.29
7355 7626 5.191722 TCACCTAGGCCTGAATAAGAAATGT 59.808 40.000 17.99 0.00 0.00 2.71
7356 7627 5.684704 TCACCTAGGCCTGAATAAGAAATG 58.315 41.667 17.99 3.96 0.00 2.32
7357 7628 5.975988 TCACCTAGGCCTGAATAAGAAAT 57.024 39.130 17.99 0.00 0.00 2.17
7358 7629 5.772393 TTCACCTAGGCCTGAATAAGAAA 57.228 39.130 17.99 0.00 0.00 2.52
7359 7630 5.428457 TCATTCACCTAGGCCTGAATAAGAA 59.572 40.000 21.28 12.16 35.37 2.52
7360 7631 4.968719 TCATTCACCTAGGCCTGAATAAGA 59.031 41.667 21.28 15.01 35.37 2.10
7361 7632 5.296151 TCATTCACCTAGGCCTGAATAAG 57.704 43.478 21.28 13.46 35.37 1.73
7362 7633 4.444876 GCTCATTCACCTAGGCCTGAATAA 60.445 45.833 21.28 11.09 35.37 1.40
7363 7634 3.071602 GCTCATTCACCTAGGCCTGAATA 59.928 47.826 21.28 12.33 35.37 1.75
7364 7635 2.158696 GCTCATTCACCTAGGCCTGAAT 60.159 50.000 17.99 17.77 37.56 2.57
7365 7636 1.210478 GCTCATTCACCTAGGCCTGAA 59.790 52.381 17.99 15.17 0.00 3.02
7366 7637 0.833287 GCTCATTCACCTAGGCCTGA 59.167 55.000 17.99 0.78 0.00 3.86
7367 7638 0.835941 AGCTCATTCACCTAGGCCTG 59.164 55.000 17.99 0.87 0.00 4.85
7368 7639 1.589414 AAGCTCATTCACCTAGGCCT 58.411 50.000 11.78 11.78 0.00 5.19
7369 7640 3.560636 TTAAGCTCATTCACCTAGGCC 57.439 47.619 9.30 0.00 0.00 5.19
7370 7641 5.358160 ACAAATTAAGCTCATTCACCTAGGC 59.642 40.000 9.30 0.00 0.00 3.93
7371 7642 6.599244 TCACAAATTAAGCTCATTCACCTAGG 59.401 38.462 7.41 7.41 0.00 3.02
7372 7643 7.615582 TCACAAATTAAGCTCATTCACCTAG 57.384 36.000 0.00 0.00 0.00 3.02
7373 7644 7.994425 TTCACAAATTAAGCTCATTCACCTA 57.006 32.000 0.00 0.00 0.00 3.08
7374 7645 6.899393 TTCACAAATTAAGCTCATTCACCT 57.101 33.333 0.00 0.00 0.00 4.00
7375 7646 7.945033 TTTTCACAAATTAAGCTCATTCACC 57.055 32.000 0.00 0.00 0.00 4.02
7404 7675 9.444600 CCGGCATATATAAAACCTACTTAACAT 57.555 33.333 0.00 0.00 0.00 2.71
7405 7676 8.431222 ACCGGCATATATAAAACCTACTTAACA 58.569 33.333 0.00 0.00 0.00 2.41
7406 7677 8.837788 ACCGGCATATATAAAACCTACTTAAC 57.162 34.615 0.00 0.00 0.00 2.01
7409 7680 9.850198 TTTAACCGGCATATATAAAACCTACTT 57.150 29.630 0.00 0.00 0.00 2.24
7410 7681 9.850198 TTTTAACCGGCATATATAAAACCTACT 57.150 29.630 0.00 0.00 0.00 2.57
7413 7684 8.983702 TCTTTTAACCGGCATATATAAAACCT 57.016 30.769 0.00 0.00 0.00 3.50
7422 7693 9.344772 TGTAAACATATCTTTTAACCGGCATAT 57.655 29.630 0.00 0.00 0.00 1.78
7423 7694 8.734218 TGTAAACATATCTTTTAACCGGCATA 57.266 30.769 0.00 0.00 0.00 3.14
7424 7695 7.633193 TGTAAACATATCTTTTAACCGGCAT 57.367 32.000 0.00 0.00 0.00 4.40
7425 7696 7.450124 TTGTAAACATATCTTTTAACCGGCA 57.550 32.000 0.00 0.00 0.00 5.69
7446 7717 9.965824 CCTCAAAAATGTCACTAAATAAGTTGT 57.034 29.630 0.00 0.00 35.76 3.32
7455 7726 9.528018 GTTCAAATTCCTCAAAAATGTCACTAA 57.472 29.630 0.00 0.00 0.00 2.24
7456 7727 8.690884 TGTTCAAATTCCTCAAAAATGTCACTA 58.309 29.630 0.00 0.00 0.00 2.74
7457 7728 7.555087 TGTTCAAATTCCTCAAAAATGTCACT 58.445 30.769 0.00 0.00 0.00 3.41
7458 7729 7.769272 TGTTCAAATTCCTCAAAAATGTCAC 57.231 32.000 0.00 0.00 0.00 3.67
7499 7770 9.665264 CACCAAATAAACAAGTTCTAAGTTCTC 57.335 33.333 0.00 0.00 0.00 2.87
7503 7774 9.581099 CAAACACCAAATAAACAAGTTCTAAGT 57.419 29.630 0.00 0.00 0.00 2.24
7514 7785 7.820044 TGTTCAAGTCAAACACCAAATAAAC 57.180 32.000 0.00 0.00 31.90 2.01
7528 7799 4.531854 TCAACTGGGAATTGTTCAAGTCA 58.468 39.130 13.47 0.00 30.59 3.41
7529 7800 5.464168 CATCAACTGGGAATTGTTCAAGTC 58.536 41.667 4.70 4.70 30.59 3.01
7575 7846 5.188434 CAAGAGGGATAAGATTGCTCACAA 58.812 41.667 0.00 0.00 40.87 3.33
7581 7852 3.145286 GAGCCAAGAGGGATAAGATTGC 58.855 50.000 0.00 0.00 40.01 3.56
7599 7870 0.673644 TTAAGCGTGAGGGCAAGAGC 60.674 55.000 0.00 0.00 41.10 4.09
7600 7871 1.808411 TTTAAGCGTGAGGGCAAGAG 58.192 50.000 0.00 0.00 34.64 2.85
7601 7872 2.489938 ATTTAAGCGTGAGGGCAAGA 57.510 45.000 0.00 0.00 34.64 3.02
7602 7873 3.270877 ACTATTTAAGCGTGAGGGCAAG 58.729 45.455 0.00 0.00 34.64 4.01
7603 7874 3.343941 ACTATTTAAGCGTGAGGGCAA 57.656 42.857 0.00 0.00 34.64 4.52
7604 7875 3.740141 GCTACTATTTAAGCGTGAGGGCA 60.740 47.826 0.00 0.00 34.64 5.36
7605 7876 2.801111 GCTACTATTTAAGCGTGAGGGC 59.199 50.000 0.00 0.00 0.00 5.19
7606 7877 3.391049 GGCTACTATTTAAGCGTGAGGG 58.609 50.000 0.00 0.00 39.71 4.30
7607 7878 3.050619 CGGCTACTATTTAAGCGTGAGG 58.949 50.000 0.00 0.00 39.71 3.86
7608 7879 3.703420 ACGGCTACTATTTAAGCGTGAG 58.297 45.455 0.00 0.00 39.71 3.51
7609 7880 3.788333 ACGGCTACTATTTAAGCGTGA 57.212 42.857 0.00 0.00 39.71 4.35
7610 7881 4.433382 GAACGGCTACTATTTAAGCGTG 57.567 45.455 0.00 0.00 39.71 5.34


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.