Multiple sequence alignment - TraesCS5B01G313900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G313900 chr5B 100.000 2903 0 0 1 2903 496484120 496487022 0.000000e+00 5361.0
1 TraesCS5B01G313900 chr5D 94.671 1839 63 14 542 2365 412351635 412353453 0.000000e+00 2820.0
2 TraesCS5B01G313900 chr5D 89.247 372 24 13 2534 2901 412353564 412353923 4.410000e-123 451.0
3 TraesCS5B01G313900 chr5D 100.000 54 0 0 45 98 80077925 80077978 1.840000e-17 100.0
4 TraesCS5B01G313900 chr5D 100.000 54 0 0 45 98 80121333 80121280 1.840000e-17 100.0
5 TraesCS5B01G313900 chr5D 100.000 54 0 0 45 98 80142925 80142872 1.840000e-17 100.0
6 TraesCS5B01G313900 chr5A 92.600 1973 88 31 394 2341 524216896 524218835 0.000000e+00 2782.0
7 TraesCS5B01G313900 chr5A 90.685 365 28 6 2540 2903 524219287 524219646 5.630000e-132 481.0
8 TraesCS5B01G313900 chr5A 92.557 309 21 2 87 394 524008686 524008379 2.650000e-120 442.0
9 TraesCS5B01G313900 chr5A 100.000 44 0 0 1 44 524216857 524216900 6.670000e-12 82.4
10 TraesCS5B01G313900 chr7D 86.533 1151 92 38 798 1899 634412369 634411233 0.000000e+00 1208.0
11 TraesCS5B01G313900 chr7D 93.709 302 18 1 97 397 82851431 82851130 4.410000e-123 451.0
12 TraesCS5B01G313900 chr7D 92.308 312 22 2 93 403 548022687 548022377 2.650000e-120 442.0
13 TraesCS5B01G313900 chr7D 84.946 93 12 2 2451 2543 559454564 559454654 3.080000e-15 93.5
14 TraesCS5B01G313900 chr7A 91.000 900 73 5 1000 1895 731962430 731963325 0.000000e+00 1206.0
15 TraesCS5B01G313900 chr7B 85.101 1188 120 30 738 1898 741719522 741718365 0.000000e+00 1160.0
16 TraesCS5B01G313900 chr7B 93.333 300 19 1 97 395 728122413 728122712 2.650000e-120 442.0
17 TraesCS5B01G313900 chr7B 93.311 299 19 1 98 395 704665369 704665667 9.550000e-120 440.0
18 TraesCS5B01G313900 chr4A 94.000 300 17 1 97 395 714826213 714825914 1.230000e-123 453.0
19 TraesCS5B01G313900 chr2B 94.000 300 16 2 97 395 142654822 142654524 1.230000e-123 453.0
20 TraesCS5B01G313900 chr3B 93.667 300 18 1 97 395 449806550 449806849 5.710000e-122 448.0
21 TraesCS5B01G313900 chr3B 86.735 98 9 4 2445 2541 822221079 822221173 3.960000e-19 106.0
22 TraesCS5B01G313900 chr3B 86.735 98 9 4 2445 2541 822311435 822311529 3.960000e-19 106.0
23 TraesCS5B01G313900 chr2A 93.667 300 18 1 97 395 434580259 434579960 5.710000e-122 448.0
24 TraesCS5B01G313900 chr2A 79.348 92 15 4 1324 1413 737341462 737341373 8.690000e-06 62.1
25 TraesCS5B01G313900 chr4B 86.957 92 10 2 2455 2546 144785834 144785745 5.120000e-18 102.0
26 TraesCS5B01G313900 chrUn 100.000 54 0 0 45 98 45121058 45121111 1.840000e-17 100.0
27 TraesCS5B01G313900 chrUn 100.000 54 0 0 45 98 222663457 222663404 1.840000e-17 100.0
28 TraesCS5B01G313900 chrUn 83.333 90 11 4 2453 2541 168633254 168633340 2.400000e-11 80.5
29 TraesCS5B01G313900 chrUn 83.333 90 11 4 2453 2541 202831662 202831748 2.400000e-11 80.5
30 TraesCS5B01G313900 chr4D 100.000 54 0 0 45 98 123306483 123306430 1.840000e-17 100.0
31 TraesCS5B01G313900 chr4D 100.000 54 0 0 45 98 123461946 123461999 1.840000e-17 100.0
32 TraesCS5B01G313900 chr4D 100.000 54 0 0 45 98 123646915 123646862 1.840000e-17 100.0
33 TraesCS5B01G313900 chr2D 100.000 54 0 0 45 98 200898224 200898171 1.840000e-17 100.0
34 TraesCS5B01G313900 chr2D 85.870 92 9 3 2453 2543 298698890 298698978 8.560000e-16 95.3
35 TraesCS5B01G313900 chr3D 84.375 96 11 4 2452 2546 12525700 12525792 1.110000e-14 91.6
36 TraesCS5B01G313900 chr1B 83.908 87 13 1 2453 2539 352627639 352627724 6.670000e-12 82.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G313900 chr5B 496484120 496487022 2902 False 5361.000000 5361 100.000000 1 2903 1 chr5B.!!$F1 2902
1 TraesCS5B01G313900 chr5D 412351635 412353923 2288 False 1635.500000 2820 91.959000 542 2901 2 chr5D.!!$F2 2359
2 TraesCS5B01G313900 chr5A 524216857 524219646 2789 False 1115.133333 2782 94.428333 1 2903 3 chr5A.!!$F1 2902
3 TraesCS5B01G313900 chr7D 634411233 634412369 1136 True 1208.000000 1208 86.533000 798 1899 1 chr7D.!!$R3 1101
4 TraesCS5B01G313900 chr7A 731962430 731963325 895 False 1206.000000 1206 91.000000 1000 1895 1 chr7A.!!$F1 895
5 TraesCS5B01G313900 chr7B 741718365 741719522 1157 True 1160.000000 1160 85.101000 738 1898 1 chr7B.!!$R1 1160

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
343 344 0.036765 GTGTGCGTTCATAGGGGTGA 60.037 55.0 0.0 0.0 0.0 4.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1970 2030 1.076533 GCTTCAGCATGCATGTGTGC 61.077 55.0 26.79 22.69 45.57 4.57 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 5.817296 AGCTGTCAATAATAACATCGAGCAA 59.183 36.000 0.00 0.00 0.00 3.91
41 42 6.018425 AGCTGTCAATAATAACATCGAGCAAG 60.018 38.462 0.00 0.00 0.00 4.01
42 43 6.018751 GCTGTCAATAATAACATCGAGCAAGA 60.019 38.462 0.00 0.00 0.00 3.02
43 44 7.465916 GCTGTCAATAATAACATCGAGCAAGAA 60.466 37.037 0.00 0.00 0.00 2.52
44 45 7.909267 TGTCAATAATAACATCGAGCAAGAAG 58.091 34.615 0.00 0.00 0.00 2.85
45 46 7.549134 TGTCAATAATAACATCGAGCAAGAAGT 59.451 33.333 0.00 0.00 0.00 3.01
46 47 8.058915 GTCAATAATAACATCGAGCAAGAAGTC 58.941 37.037 0.00 0.00 0.00 3.01
47 48 7.224753 TCAATAATAACATCGAGCAAGAAGTCC 59.775 37.037 0.00 0.00 0.00 3.85
48 49 2.839486 AACATCGAGCAAGAAGTCCA 57.161 45.000 0.00 0.00 0.00 4.02
49 50 2.376808 ACATCGAGCAAGAAGTCCAG 57.623 50.000 0.00 0.00 0.00 3.86
50 51 1.066573 ACATCGAGCAAGAAGTCCAGG 60.067 52.381 0.00 0.00 0.00 4.45
51 52 0.539051 ATCGAGCAAGAAGTCCAGGG 59.461 55.000 0.00 0.00 0.00 4.45
52 53 0.541998 TCGAGCAAGAAGTCCAGGGA 60.542 55.000 0.00 0.00 0.00 4.20
53 54 0.108424 CGAGCAAGAAGTCCAGGGAG 60.108 60.000 0.00 0.00 0.00 4.30
54 55 1.270907 GAGCAAGAAGTCCAGGGAGA 58.729 55.000 0.00 0.00 0.00 3.71
55 56 1.206849 GAGCAAGAAGTCCAGGGAGAG 59.793 57.143 0.00 0.00 0.00 3.20
56 57 0.392327 GCAAGAAGTCCAGGGAGAGC 60.392 60.000 0.00 0.00 0.00 4.09
57 58 1.274712 CAAGAAGTCCAGGGAGAGCT 58.725 55.000 0.00 0.00 0.00 4.09
58 59 1.066286 CAAGAAGTCCAGGGAGAGCTG 60.066 57.143 0.00 0.00 0.00 4.24
59 60 1.220477 GAAGTCCAGGGAGAGCTGC 59.780 63.158 0.00 0.00 0.00 5.25
60 61 1.229464 AAGTCCAGGGAGAGCTGCT 60.229 57.895 0.00 0.00 0.00 4.24
61 62 1.551908 AAGTCCAGGGAGAGCTGCTG 61.552 60.000 7.01 0.00 0.00 4.41
62 63 1.986757 GTCCAGGGAGAGCTGCTGA 60.987 63.158 7.01 0.00 0.00 4.26
63 64 1.229304 TCCAGGGAGAGCTGCTGAA 60.229 57.895 7.01 0.00 0.00 3.02
64 65 1.221293 CCAGGGAGAGCTGCTGAAG 59.779 63.158 7.01 0.00 0.00 3.02
65 66 1.221293 CAGGGAGAGCTGCTGAAGG 59.779 63.158 7.01 0.00 0.00 3.46
66 67 1.994507 AGGGAGAGCTGCTGAAGGG 60.995 63.158 7.01 0.00 0.00 3.95
67 68 1.992277 GGGAGAGCTGCTGAAGGGA 60.992 63.158 7.01 0.00 0.00 4.20
68 69 1.557269 GGGAGAGCTGCTGAAGGGAA 61.557 60.000 7.01 0.00 0.00 3.97
69 70 0.107752 GGAGAGCTGCTGAAGGGAAG 60.108 60.000 7.01 0.00 0.00 3.46
70 71 0.107752 GAGAGCTGCTGAAGGGAAGG 60.108 60.000 7.01 0.00 0.00 3.46
71 72 0.839853 AGAGCTGCTGAAGGGAAGGT 60.840 55.000 7.01 0.00 0.00 3.50
72 73 0.676151 GAGCTGCTGAAGGGAAGGTG 60.676 60.000 7.01 0.00 0.00 4.00
73 74 1.676967 GCTGCTGAAGGGAAGGTGG 60.677 63.158 0.00 0.00 0.00 4.61
74 75 1.001641 CTGCTGAAGGGAAGGTGGG 60.002 63.158 0.00 0.00 0.00 4.61
75 76 2.361737 GCTGAAGGGAAGGTGGGC 60.362 66.667 0.00 0.00 0.00 5.36
76 77 2.045926 CTGAAGGGAAGGTGGGCG 60.046 66.667 0.00 0.00 0.00 6.13
77 78 2.528127 TGAAGGGAAGGTGGGCGA 60.528 61.111 0.00 0.00 0.00 5.54
78 79 2.124507 CTGAAGGGAAGGTGGGCGAA 62.125 60.000 0.00 0.00 0.00 4.70
79 80 1.674651 GAAGGGAAGGTGGGCGAAC 60.675 63.158 0.00 0.00 0.00 3.95
80 81 3.205851 AAGGGAAGGTGGGCGAACC 62.206 63.158 0.00 0.00 40.85 3.62
90 91 3.041940 GGCGAACCCACACGAGTG 61.042 66.667 5.96 5.96 45.47 3.51
102 103 3.208747 ACACGAGTGAAAACCCAATCT 57.791 42.857 10.50 0.00 0.00 2.40
103 104 2.878406 ACACGAGTGAAAACCCAATCTG 59.122 45.455 10.50 0.00 0.00 2.90
104 105 2.878406 CACGAGTGAAAACCCAATCTGT 59.122 45.455 0.00 0.00 0.00 3.41
105 106 4.062293 CACGAGTGAAAACCCAATCTGTA 58.938 43.478 0.00 0.00 0.00 2.74
106 107 4.152402 CACGAGTGAAAACCCAATCTGTAG 59.848 45.833 0.00 0.00 0.00 2.74
107 108 4.202326 ACGAGTGAAAACCCAATCTGTAGT 60.202 41.667 0.00 0.00 0.00 2.73
108 109 4.755123 CGAGTGAAAACCCAATCTGTAGTT 59.245 41.667 0.00 0.00 0.00 2.24
109 110 5.334105 CGAGTGAAAACCCAATCTGTAGTTG 60.334 44.000 0.00 0.00 0.00 3.16
110 111 4.827284 AGTGAAAACCCAATCTGTAGTTGG 59.173 41.667 0.00 0.00 44.54 3.77
121 122 5.878406 ATCTGTAGTTGGATGGTTAGAGG 57.122 43.478 0.00 0.00 0.00 3.69
122 123 4.030913 TCTGTAGTTGGATGGTTAGAGGG 58.969 47.826 0.00 0.00 0.00 4.30
123 124 4.030913 CTGTAGTTGGATGGTTAGAGGGA 58.969 47.826 0.00 0.00 0.00 4.20
124 125 3.773119 TGTAGTTGGATGGTTAGAGGGAC 59.227 47.826 0.00 0.00 0.00 4.46
126 127 2.840651 AGTTGGATGGTTAGAGGGACTG 59.159 50.000 0.00 0.00 41.55 3.51
127 128 2.572104 GTTGGATGGTTAGAGGGACTGT 59.428 50.000 0.00 0.00 41.55 3.55
128 129 2.187958 TGGATGGTTAGAGGGACTGTG 58.812 52.381 0.00 0.00 41.55 3.66
129 130 2.225522 TGGATGGTTAGAGGGACTGTGA 60.226 50.000 0.00 0.00 41.55 3.58
130 131 3.041946 GGATGGTTAGAGGGACTGTGAT 58.958 50.000 0.00 0.00 41.55 3.06
131 132 4.223953 GGATGGTTAGAGGGACTGTGATA 58.776 47.826 0.00 0.00 41.55 2.15
132 133 4.841246 GGATGGTTAGAGGGACTGTGATAT 59.159 45.833 0.00 0.00 41.55 1.63
133 134 5.046950 GGATGGTTAGAGGGACTGTGATATC 60.047 48.000 0.00 0.00 41.55 1.63
134 135 4.223953 TGGTTAGAGGGACTGTGATATCC 58.776 47.826 0.00 0.00 41.55 2.59
140 141 0.398318 GGACTGTGATATCCCCAGCC 59.602 60.000 15.72 14.01 0.00 4.85
141 142 0.398318 GACTGTGATATCCCCAGCCC 59.602 60.000 15.72 7.60 0.00 5.19
142 143 0.327480 ACTGTGATATCCCCAGCCCA 60.327 55.000 15.72 0.00 0.00 5.36
143 144 0.109342 CTGTGATATCCCCAGCCCAC 59.891 60.000 0.00 0.00 0.00 4.61
144 145 1.352622 TGTGATATCCCCAGCCCACC 61.353 60.000 0.00 0.00 0.00 4.61
145 146 1.005423 TGATATCCCCAGCCCACCA 59.995 57.895 0.00 0.00 0.00 4.17
146 147 1.061905 TGATATCCCCAGCCCACCAG 61.062 60.000 0.00 0.00 0.00 4.00
147 148 1.775877 ATATCCCCAGCCCACCAGG 60.776 63.158 0.00 0.00 39.47 4.45
148 149 2.284211 ATATCCCCAGCCCACCAGGA 62.284 60.000 0.00 0.00 38.24 3.86
149 150 2.284211 TATCCCCAGCCCACCAGGAT 62.284 60.000 0.00 0.00 40.43 3.24
150 151 3.350163 CCCCAGCCCACCAGGATT 61.350 66.667 0.00 0.00 38.24 3.01
151 152 2.276740 CCCAGCCCACCAGGATTC 59.723 66.667 0.00 0.00 38.24 2.52
152 153 2.615465 CCCAGCCCACCAGGATTCA 61.615 63.158 0.00 0.00 38.24 2.57
153 154 1.383799 CCAGCCCACCAGGATTCAA 59.616 57.895 0.00 0.00 38.24 2.69
154 155 0.251742 CCAGCCCACCAGGATTCAAA 60.252 55.000 0.00 0.00 38.24 2.69
155 156 1.620524 CCAGCCCACCAGGATTCAAAT 60.621 52.381 0.00 0.00 38.24 2.32
156 157 1.753073 CAGCCCACCAGGATTCAAATC 59.247 52.381 0.00 0.00 38.24 2.17
170 171 6.551385 GATTCAAATCCTGATACTCGCATT 57.449 37.500 0.00 0.00 32.78 3.56
171 172 6.949352 ATTCAAATCCTGATACTCGCATTT 57.051 33.333 0.00 0.00 32.78 2.32
172 173 8.087982 GATTCAAATCCTGATACTCGCATTTA 57.912 34.615 0.00 0.00 32.78 1.40
173 174 8.627208 ATTCAAATCCTGATACTCGCATTTAT 57.373 30.769 0.00 0.00 32.78 1.40
174 175 8.450578 TTCAAATCCTGATACTCGCATTTATT 57.549 30.769 0.00 0.00 32.78 1.40
175 176 8.087982 TCAAATCCTGATACTCGCATTTATTC 57.912 34.615 0.00 0.00 0.00 1.75
176 177 7.173218 TCAAATCCTGATACTCGCATTTATTCC 59.827 37.037 0.00 0.00 0.00 3.01
177 178 5.808366 TCCTGATACTCGCATTTATTCCT 57.192 39.130 0.00 0.00 0.00 3.36
178 179 5.541845 TCCTGATACTCGCATTTATTCCTG 58.458 41.667 0.00 0.00 0.00 3.86
179 180 4.692625 CCTGATACTCGCATTTATTCCTGG 59.307 45.833 0.00 0.00 0.00 4.45
180 181 5.511373 CCTGATACTCGCATTTATTCCTGGA 60.511 44.000 0.00 0.00 0.00 3.86
181 182 6.114187 TGATACTCGCATTTATTCCTGGAT 57.886 37.500 0.00 0.00 0.00 3.41
182 183 6.533730 TGATACTCGCATTTATTCCTGGATT 58.466 36.000 0.00 0.00 0.00 3.01
183 184 6.998074 TGATACTCGCATTTATTCCTGGATTT 59.002 34.615 0.00 0.00 0.00 2.17
184 185 8.154203 TGATACTCGCATTTATTCCTGGATTTA 58.846 33.333 0.00 0.00 0.00 1.40
185 186 9.167311 GATACTCGCATTTATTCCTGGATTTAT 57.833 33.333 0.00 0.00 0.00 1.40
186 187 7.823745 ACTCGCATTTATTCCTGGATTTATT 57.176 32.000 0.00 0.00 0.00 1.40
187 188 8.237811 ACTCGCATTTATTCCTGGATTTATTT 57.762 30.769 0.00 0.00 0.00 1.40
188 189 8.352942 ACTCGCATTTATTCCTGGATTTATTTC 58.647 33.333 0.00 0.00 0.00 2.17
189 190 8.231692 TCGCATTTATTCCTGGATTTATTTCA 57.768 30.769 0.00 0.00 0.00 2.69
190 191 8.352201 TCGCATTTATTCCTGGATTTATTTCAG 58.648 33.333 0.00 0.00 0.00 3.02
191 192 7.596248 CGCATTTATTCCTGGATTTATTTCAGG 59.404 37.037 0.00 0.00 46.91 3.86
199 200 6.076981 CTGGATTTATTTCAGGATTTCCGG 57.923 41.667 0.00 0.00 42.08 5.14
200 201 4.340950 TGGATTTATTTCAGGATTTCCGGC 59.659 41.667 0.00 0.00 42.08 6.13
201 202 4.537015 GATTTATTTCAGGATTTCCGGCG 58.463 43.478 0.00 0.00 42.08 6.46
202 203 2.992124 TATTTCAGGATTTCCGGCGA 57.008 45.000 9.30 0.00 42.08 5.54
203 204 2.348411 ATTTCAGGATTTCCGGCGAT 57.652 45.000 9.30 0.00 42.08 4.58
204 205 1.378531 TTTCAGGATTTCCGGCGATG 58.621 50.000 9.30 0.00 42.08 3.84
205 206 1.095228 TTCAGGATTTCCGGCGATGC 61.095 55.000 9.30 0.00 42.08 3.91
206 207 2.588877 AGGATTTCCGGCGATGCG 60.589 61.111 9.30 0.00 42.08 4.73
217 218 2.711311 CGATGCGCATTCAGTGGG 59.289 61.111 26.12 4.47 43.21 4.61
218 219 1.815003 CGATGCGCATTCAGTGGGA 60.815 57.895 26.12 0.00 43.02 4.37
219 220 1.769098 CGATGCGCATTCAGTGGGAG 61.769 60.000 26.12 4.12 43.02 4.30
220 221 1.442526 GATGCGCATTCAGTGGGAGG 61.443 60.000 26.12 0.00 43.02 4.30
221 222 1.913951 ATGCGCATTCAGTGGGAGGA 61.914 55.000 19.28 0.00 43.02 3.71
222 223 1.817099 GCGCATTCAGTGGGAGGAG 60.817 63.158 0.30 0.00 43.02 3.69
223 224 1.900351 CGCATTCAGTGGGAGGAGA 59.100 57.895 0.00 0.00 43.02 3.71
224 225 0.460987 CGCATTCAGTGGGAGGAGAC 60.461 60.000 0.00 0.00 43.02 3.36
225 226 0.460987 GCATTCAGTGGGAGGAGACG 60.461 60.000 0.00 0.00 0.00 4.18
226 227 0.898320 CATTCAGTGGGAGGAGACGT 59.102 55.000 0.00 0.00 0.00 4.34
227 228 1.276421 CATTCAGTGGGAGGAGACGTT 59.724 52.381 0.00 0.00 0.00 3.99
228 229 0.966920 TTCAGTGGGAGGAGACGTTC 59.033 55.000 0.00 0.00 0.00 3.95
251 252 4.883300 GACGACGAGGCGCCTACG 62.883 72.222 32.91 32.91 44.07 3.51
253 254 3.950254 CGACGAGGCGCCTACGAT 61.950 66.667 37.37 26.68 43.93 3.73
254 255 2.353607 GACGAGGCGCCTACGATG 60.354 66.667 37.37 24.97 43.93 3.84
255 256 2.827190 ACGAGGCGCCTACGATGA 60.827 61.111 37.37 0.00 43.93 2.92
256 257 2.353607 CGAGGCGCCTACGATGAC 60.354 66.667 32.97 14.51 43.93 3.06
257 258 2.835705 CGAGGCGCCTACGATGACT 61.836 63.158 32.97 3.02 43.93 3.41
258 259 1.437986 GAGGCGCCTACGATGACTT 59.562 57.895 32.97 2.04 43.93 3.01
259 260 0.595310 GAGGCGCCTACGATGACTTC 60.595 60.000 32.97 9.38 43.93 3.01
274 275 6.861158 CGATGACTTCGTAAATCTCAAGATG 58.139 40.000 2.72 0.00 43.01 2.90
275 276 6.693113 CGATGACTTCGTAAATCTCAAGATGA 59.307 38.462 2.72 0.00 43.01 2.92
276 277 7.380870 CGATGACTTCGTAAATCTCAAGATGAT 59.619 37.037 2.72 0.00 43.01 2.45
277 278 9.684448 GATGACTTCGTAAATCTCAAGATGATA 57.316 33.333 0.00 0.00 34.49 2.15
279 280 9.468532 TGACTTCGTAAATCTCAAGATGATATG 57.531 33.333 0.00 0.00 34.49 1.78
280 281 8.304202 ACTTCGTAAATCTCAAGATGATATGC 57.696 34.615 0.00 0.00 34.49 3.14
281 282 7.386299 ACTTCGTAAATCTCAAGATGATATGCC 59.614 37.037 0.00 0.00 34.49 4.40
282 283 5.863935 TCGTAAATCTCAAGATGATATGCCG 59.136 40.000 0.00 0.00 34.49 5.69
283 284 5.062683 CGTAAATCTCAAGATGATATGCCGG 59.937 44.000 0.00 0.00 34.49 6.13
284 285 2.462456 TCTCAAGATGATATGCCGGC 57.538 50.000 22.73 22.73 0.00 6.13
285 286 1.973515 TCTCAAGATGATATGCCGGCT 59.026 47.619 29.70 15.76 0.00 5.52
286 287 2.028658 TCTCAAGATGATATGCCGGCTC 60.029 50.000 29.70 17.89 0.00 4.70
287 288 1.693606 TCAAGATGATATGCCGGCTCA 59.306 47.619 29.70 23.34 0.00 4.26
288 289 2.074576 CAAGATGATATGCCGGCTCAG 58.925 52.381 29.70 7.35 0.00 3.35
289 290 1.346062 AGATGATATGCCGGCTCAGT 58.654 50.000 29.70 13.44 0.00 3.41
290 291 1.274728 AGATGATATGCCGGCTCAGTC 59.725 52.381 29.70 19.55 0.00 3.51
291 292 1.274728 GATGATATGCCGGCTCAGTCT 59.725 52.381 29.70 8.26 0.00 3.24
292 293 1.123077 TGATATGCCGGCTCAGTCTT 58.877 50.000 29.70 5.10 0.00 3.01
293 294 1.486310 TGATATGCCGGCTCAGTCTTT 59.514 47.619 29.70 3.35 0.00 2.52
294 295 2.139118 GATATGCCGGCTCAGTCTTTC 58.861 52.381 29.70 9.22 0.00 2.62
295 296 0.179111 TATGCCGGCTCAGTCTTTCG 60.179 55.000 29.70 0.00 0.00 3.46
296 297 2.815647 GCCGGCTCAGTCTTTCGG 60.816 66.667 22.15 0.00 43.13 4.30
297 298 2.970639 CCGGCTCAGTCTTTCGGA 59.029 61.111 0.00 0.00 42.94 4.55
298 299 1.153745 CCGGCTCAGTCTTTCGGAG 60.154 63.158 0.00 0.00 42.94 4.63
299 300 1.153745 CGGCTCAGTCTTTCGGAGG 60.154 63.158 0.00 0.00 38.48 4.30
300 301 4.193653 GCTCAGTCTTTCGGAGGC 57.806 61.111 0.00 0.00 38.48 4.70
301 302 1.807573 GCTCAGTCTTTCGGAGGCG 60.808 63.158 0.00 0.00 38.48 5.52
302 303 1.807573 CTCAGTCTTTCGGAGGCGC 60.808 63.158 0.00 0.00 35.32 6.53
303 304 2.219325 CTCAGTCTTTCGGAGGCGCT 62.219 60.000 7.64 0.00 35.32 5.92
304 305 1.807573 CAGTCTTTCGGAGGCGCTC 60.808 63.158 7.64 2.45 34.31 5.03
305 306 2.881352 GTCTTTCGGAGGCGCTCG 60.881 66.667 7.64 9.72 0.00 5.03
306 307 3.371063 TCTTTCGGAGGCGCTCGT 61.371 61.111 7.64 0.00 0.00 4.18
307 308 2.042259 TCTTTCGGAGGCGCTCGTA 61.042 57.895 7.64 0.19 0.00 3.43
308 309 1.586564 CTTTCGGAGGCGCTCGTAG 60.587 63.158 7.64 7.84 0.00 3.51
309 310 1.989966 CTTTCGGAGGCGCTCGTAGA 61.990 60.000 7.64 0.00 0.00 2.59
322 323 1.306148 TCGTAGAGATAGGGTGTGCG 58.694 55.000 0.00 0.00 0.00 5.34
323 324 1.022735 CGTAGAGATAGGGTGTGCGT 58.977 55.000 0.00 0.00 0.00 5.24
324 325 1.268589 CGTAGAGATAGGGTGTGCGTG 60.269 57.143 0.00 0.00 0.00 5.34
325 326 1.749634 GTAGAGATAGGGTGTGCGTGT 59.250 52.381 0.00 0.00 0.00 4.49
326 327 0.532573 AGAGATAGGGTGTGCGTGTG 59.467 55.000 0.00 0.00 0.00 3.82
327 328 0.246635 GAGATAGGGTGTGCGTGTGT 59.753 55.000 0.00 0.00 0.00 3.72
328 329 0.037326 AGATAGGGTGTGCGTGTGTG 60.037 55.000 0.00 0.00 0.00 3.82
329 330 1.635663 GATAGGGTGTGCGTGTGTGC 61.636 60.000 0.00 0.00 0.00 4.57
332 333 3.871574 GGTGTGCGTGTGTGCGTT 61.872 61.111 0.00 0.00 37.81 4.84
333 334 2.350760 GTGTGCGTGTGTGCGTTC 60.351 61.111 0.00 0.00 37.81 3.95
334 335 2.815647 TGTGCGTGTGTGCGTTCA 60.816 55.556 0.00 0.00 37.81 3.18
335 336 2.176926 TGTGCGTGTGTGCGTTCAT 61.177 52.632 0.00 0.00 37.81 2.57
336 337 0.876342 TGTGCGTGTGTGCGTTCATA 60.876 50.000 0.00 0.00 37.81 2.15
337 338 0.179250 GTGCGTGTGTGCGTTCATAG 60.179 55.000 0.00 0.00 37.81 2.23
338 339 1.288419 TGCGTGTGTGCGTTCATAGG 61.288 55.000 0.00 0.00 37.81 2.57
339 340 1.966493 GCGTGTGTGCGTTCATAGGG 61.966 60.000 0.00 0.00 0.00 3.53
340 341 1.358725 CGTGTGTGCGTTCATAGGGG 61.359 60.000 0.00 0.00 0.00 4.79
341 342 0.321298 GTGTGTGCGTTCATAGGGGT 60.321 55.000 0.00 0.00 0.00 4.95
342 343 0.321210 TGTGTGCGTTCATAGGGGTG 60.321 55.000 0.00 0.00 0.00 4.61
343 344 0.036765 GTGTGCGTTCATAGGGGTGA 60.037 55.000 0.00 0.00 0.00 4.02
344 345 0.249120 TGTGCGTTCATAGGGGTGAG 59.751 55.000 0.00 0.00 0.00 3.51
345 346 0.249398 GTGCGTTCATAGGGGTGAGT 59.751 55.000 0.00 0.00 0.00 3.41
346 347 0.249120 TGCGTTCATAGGGGTGAGTG 59.751 55.000 0.00 0.00 0.00 3.51
347 348 0.249398 GCGTTCATAGGGGTGAGTGT 59.751 55.000 0.00 0.00 0.00 3.55
348 349 2.007049 GCGTTCATAGGGGTGAGTGTG 61.007 57.143 0.00 0.00 0.00 3.82
349 350 1.275291 CGTTCATAGGGGTGAGTGTGT 59.725 52.381 0.00 0.00 0.00 3.72
350 351 2.699954 GTTCATAGGGGTGAGTGTGTG 58.300 52.381 0.00 0.00 0.00 3.82
351 352 0.613260 TCATAGGGGTGAGTGTGTGC 59.387 55.000 0.00 0.00 0.00 4.57
352 353 0.740868 CATAGGGGTGAGTGTGTGCG 60.741 60.000 0.00 0.00 0.00 5.34
353 354 2.521958 ATAGGGGTGAGTGTGTGCGC 62.522 60.000 0.00 0.00 0.00 6.09
356 357 4.000557 GGTGAGTGTGTGCGCGTG 62.001 66.667 8.43 0.00 0.00 5.34
357 358 3.261951 GTGAGTGTGTGCGCGTGT 61.262 61.111 8.43 0.00 0.00 4.49
358 359 1.947146 GTGAGTGTGTGCGCGTGTA 60.947 57.895 8.43 0.00 0.00 2.90
359 360 1.006688 TGAGTGTGTGCGCGTGTAT 60.007 52.632 8.43 0.00 0.00 2.29
360 361 0.241481 TGAGTGTGTGCGCGTGTATA 59.759 50.000 8.43 0.00 0.00 1.47
361 362 1.135228 TGAGTGTGTGCGCGTGTATAT 60.135 47.619 8.43 0.00 0.00 0.86
362 363 1.255342 GAGTGTGTGCGCGTGTATATG 59.745 52.381 8.43 0.00 0.00 1.78
363 364 1.135228 AGTGTGTGCGCGTGTATATGA 60.135 47.619 8.43 0.00 0.00 2.15
364 365 1.255342 GTGTGTGCGCGTGTATATGAG 59.745 52.381 8.43 0.00 0.00 2.90
365 366 0.229753 GTGTGCGCGTGTATATGAGC 59.770 55.000 8.43 0.41 38.85 4.26
368 369 4.228451 CGCGTGTATATGAGCGCT 57.772 55.556 11.27 11.27 46.56 5.92
369 370 2.506544 CGCGTGTATATGAGCGCTT 58.493 52.632 13.26 0.00 46.56 4.68
370 371 0.159554 CGCGTGTATATGAGCGCTTG 59.840 55.000 13.26 0.00 46.56 4.01
371 372 1.209128 GCGTGTATATGAGCGCTTGT 58.791 50.000 13.26 5.98 45.48 3.16
372 373 1.071239 GCGTGTATATGAGCGCTTGTG 60.071 52.381 13.26 0.00 45.48 3.33
373 374 2.193447 CGTGTATATGAGCGCTTGTGT 58.807 47.619 13.26 4.27 0.00 3.72
374 375 2.603110 CGTGTATATGAGCGCTTGTGTT 59.397 45.455 13.26 0.00 0.00 3.32
375 376 3.062099 CGTGTATATGAGCGCTTGTGTTT 59.938 43.478 13.26 0.00 0.00 2.83
376 377 4.334443 GTGTATATGAGCGCTTGTGTTTG 58.666 43.478 13.26 0.00 0.00 2.93
377 378 2.549633 ATATGAGCGCTTGTGTTTGC 57.450 45.000 13.26 0.00 0.00 3.68
378 379 0.521291 TATGAGCGCTTGTGTTTGCC 59.479 50.000 13.26 0.00 0.00 4.52
379 380 1.174712 ATGAGCGCTTGTGTTTGCCT 61.175 50.000 13.26 0.00 0.00 4.75
380 381 0.533978 TGAGCGCTTGTGTTTGCCTA 60.534 50.000 13.26 0.00 0.00 3.93
381 382 0.591170 GAGCGCTTGTGTTTGCCTAA 59.409 50.000 13.26 0.00 0.00 2.69
382 383 1.200020 GAGCGCTTGTGTTTGCCTAAT 59.800 47.619 13.26 0.00 0.00 1.73
383 384 1.068333 AGCGCTTGTGTTTGCCTAATG 60.068 47.619 2.64 0.00 0.00 1.90
384 385 1.335872 GCGCTTGTGTTTGCCTAATGT 60.336 47.619 0.00 0.00 0.00 2.71
385 386 2.862140 GCGCTTGTGTTTGCCTAATGTT 60.862 45.455 0.00 0.00 0.00 2.71
386 387 2.979813 CGCTTGTGTTTGCCTAATGTTC 59.020 45.455 0.00 0.00 0.00 3.18
387 388 3.549827 CGCTTGTGTTTGCCTAATGTTCA 60.550 43.478 0.00 0.00 0.00 3.18
388 389 4.367450 GCTTGTGTTTGCCTAATGTTCAA 58.633 39.130 0.00 0.00 0.00 2.69
389 390 4.808364 GCTTGTGTTTGCCTAATGTTCAAA 59.192 37.500 0.00 0.00 0.00 2.69
390 391 5.293079 GCTTGTGTTTGCCTAATGTTCAAAA 59.707 36.000 0.00 0.00 32.36 2.44
391 392 6.183360 GCTTGTGTTTGCCTAATGTTCAAAAA 60.183 34.615 0.00 0.00 32.36 1.94
419 420 0.102481 GTCACCGAGTGTCACACTGT 59.898 55.000 17.33 4.95 45.44 3.55
430 431 3.684788 GTGTCACACTGTGTCTTTGTTCT 59.315 43.478 11.12 0.00 34.79 3.01
450 451 1.691196 TTTCCTGCAGACAACCAAGG 58.309 50.000 17.39 0.00 0.00 3.61
451 452 0.843309 TTCCTGCAGACAACCAAGGA 59.157 50.000 17.39 0.00 0.00 3.36
452 453 1.067295 TCCTGCAGACAACCAAGGAT 58.933 50.000 17.39 0.00 0.00 3.24
453 454 1.171308 CCTGCAGACAACCAAGGATG 58.829 55.000 17.39 0.00 0.00 3.51
454 455 1.546323 CCTGCAGACAACCAAGGATGT 60.546 52.381 17.39 1.27 33.82 3.06
455 456 2.233271 CTGCAGACAACCAAGGATGTT 58.767 47.619 8.42 0.00 31.28 2.71
456 457 1.955778 TGCAGACAACCAAGGATGTTG 59.044 47.619 3.42 5.66 46.60 3.33
457 458 1.336240 GCAGACAACCAAGGATGTTGC 60.336 52.381 15.15 15.15 45.42 4.17
458 459 1.955778 CAGACAACCAAGGATGTTGCA 59.044 47.619 3.42 0.00 45.42 4.08
459 460 2.030540 CAGACAACCAAGGATGTTGCAG 60.031 50.000 3.42 0.00 45.42 4.41
460 461 1.270550 GACAACCAAGGATGTTGCAGG 59.729 52.381 3.42 0.00 45.42 4.85
461 462 0.604578 CAACCAAGGATGTTGCAGGG 59.395 55.000 0.00 0.00 36.95 4.45
462 463 1.187567 AACCAAGGATGTTGCAGGGC 61.188 55.000 0.00 0.00 0.00 5.19
463 464 1.607178 CCAAGGATGTTGCAGGGCA 60.607 57.895 0.00 0.00 36.47 5.36
464 465 1.601419 CCAAGGATGTTGCAGGGCAG 61.601 60.000 0.00 0.00 40.61 4.85
465 466 0.609957 CAAGGATGTTGCAGGGCAGA 60.610 55.000 0.00 0.00 40.61 4.26
466 467 0.112995 AAGGATGTTGCAGGGCAGAA 59.887 50.000 0.00 0.00 40.61 3.02
467 468 0.610232 AGGATGTTGCAGGGCAGAAC 60.610 55.000 0.00 0.00 40.61 3.01
468 469 0.610232 GGATGTTGCAGGGCAGAACT 60.610 55.000 0.00 0.00 40.61 3.01
500 502 2.501723 GTGTCTTCTATGGGCCTTCTCA 59.498 50.000 4.53 0.00 0.00 3.27
506 508 3.889815 TCTATGGGCCTTCTCACAAATG 58.110 45.455 4.53 0.00 0.00 2.32
508 510 1.243342 TGGGCCTTCTCACAAATGCG 61.243 55.000 4.53 0.00 0.00 4.73
511 513 0.179215 GCCTTCTCACAAATGCGTCG 60.179 55.000 0.00 0.00 0.00 5.12
528 530 2.794981 CGTCGAGACAACGATAAGCCAT 60.795 50.000 4.02 0.00 43.93 4.40
610 612 1.481363 TGATAATACCGTGGCCGACAA 59.519 47.619 0.00 0.00 35.63 3.18
693 699 2.913777 AAAAAGAGGAAATACGCGGC 57.086 45.000 12.47 0.00 0.00 6.53
694 700 0.725117 AAAAGAGGAAATACGCGGCG 59.275 50.000 22.36 22.36 0.00 6.46
717 723 0.108585 TCGGCCCATTCCTTAGCATC 59.891 55.000 0.00 0.00 0.00 3.91
868 874 0.877649 CACAATCTCATCCGCCCTCG 60.878 60.000 0.00 0.00 0.00 4.63
943 961 3.383825 TCTTCGCCTATAAACCTCTCACC 59.616 47.826 0.00 0.00 0.00 4.02
1097 1142 3.141488 CCTCCTCCTCGTCACCGG 61.141 72.222 0.00 0.00 33.95 5.28
1119 1164 2.444140 GCCGCCTTCCTCCTCCTA 60.444 66.667 0.00 0.00 0.00 2.94
1473 1533 1.211969 CCTGGAGTCGTACCACGTG 59.788 63.158 9.08 9.08 43.14 4.49
1476 1536 0.535780 TGGAGTCGTACCACGTGACT 60.536 55.000 19.30 12.14 45.18 3.41
2064 2128 2.386501 GAGCGTTCACGATCGAGTAT 57.613 50.000 24.34 0.00 44.84 2.12
2259 2327 6.514048 GCCTTTCTATTGTGTGGCTCATAATC 60.514 42.308 13.61 0.00 38.48 1.75
2271 2339 6.779539 TGTGGCTCATAATCAGAGAGATCTAA 59.220 38.462 0.00 0.00 35.39 2.10
2311 2379 7.042791 GCGGATAATGTGGGATTTATTTGTTTG 60.043 37.037 0.00 0.00 0.00 2.93
2312 2380 8.194104 CGGATAATGTGGGATTTATTTGTTTGA 58.806 33.333 0.00 0.00 0.00 2.69
2320 2389 7.387397 GTGGGATTTATTTGTTTGATTGAAGCA 59.613 33.333 0.00 0.00 0.00 3.91
2322 2391 8.229811 GGGATTTATTTGTTTGATTGAAGCAAC 58.770 33.333 0.00 0.00 34.79 4.17
2341 2410 7.268199 AGCAACAATACCAGTGATGAATATG 57.732 36.000 0.00 0.00 0.00 1.78
2366 2483 4.972440 GCACTAGCTACTTGCATATTTTGC 59.028 41.667 15.00 0.00 45.94 3.68
2389 2807 5.348997 GCAAGGTGACTCATACAAGTTACTC 59.651 44.000 0.00 0.00 42.68 2.59
2390 2808 5.662674 AGGTGACTCATACAAGTTACTCC 57.337 43.478 0.00 0.00 36.36 3.85
2391 2809 4.466726 AGGTGACTCATACAAGTTACTCCC 59.533 45.833 0.00 0.00 36.36 4.30
2393 2811 5.104900 GGTGACTCATACAAGTTACTCCCAT 60.105 44.000 0.00 0.00 36.36 4.00
2394 2812 6.407202 GTGACTCATACAAGTTACTCCCATT 58.593 40.000 0.00 0.00 34.05 3.16
2395 2813 6.535508 GTGACTCATACAAGTTACTCCCATTC 59.464 42.308 0.00 0.00 34.05 2.67
2396 2814 6.440647 TGACTCATACAAGTTACTCCCATTCT 59.559 38.462 0.00 0.00 0.00 2.40
2405 2823 5.701224 AGTTACTCCCATTCTGTTGGAAAA 58.299 37.500 0.00 0.00 39.25 2.29
2418 2836 7.531857 TCTGTTGGAAAATGCAGGTTAATTA 57.468 32.000 0.00 0.00 0.00 1.40
2419 2837 7.957002 TCTGTTGGAAAATGCAGGTTAATTAA 58.043 30.769 0.00 0.00 0.00 1.40
2420 2838 8.592809 TCTGTTGGAAAATGCAGGTTAATTAAT 58.407 29.630 0.31 0.00 0.00 1.40
2421 2839 9.218440 CTGTTGGAAAATGCAGGTTAATTAATT 57.782 29.630 5.89 5.89 0.00 1.40
2422 2840 9.213799 TGTTGGAAAATGCAGGTTAATTAATTC 57.786 29.630 3.39 0.00 0.00 2.17
2429 2847 4.100808 TGCAGGTTAATTAATTCCATGGCC 59.899 41.667 6.96 0.00 0.00 5.36
2446 2864 0.808755 GCCGGTGAGTGTAATTTGGG 59.191 55.000 1.90 0.00 0.00 4.12
2450 2868 4.073549 CCGGTGAGTGTAATTTGGGTAAA 58.926 43.478 0.00 0.00 0.00 2.01
2451 2869 4.703093 CCGGTGAGTGTAATTTGGGTAAAT 59.297 41.667 0.00 0.00 38.11 1.40
2452 2870 5.881443 CCGGTGAGTGTAATTTGGGTAAATA 59.119 40.000 0.00 0.00 35.50 1.40
2453 2871 6.183360 CCGGTGAGTGTAATTTGGGTAAATAC 60.183 42.308 0.00 0.00 35.50 1.89
2454 2872 6.596497 CGGTGAGTGTAATTTGGGTAAATACT 59.404 38.462 0.00 0.00 35.50 2.12
2455 2873 7.765360 CGGTGAGTGTAATTTGGGTAAATACTA 59.235 37.037 0.00 0.00 35.50 1.82
2456 2874 8.886719 GGTGAGTGTAATTTGGGTAAATACTAC 58.113 37.037 0.00 0.00 35.50 2.73
2457 2875 9.662947 GTGAGTGTAATTTGGGTAAATACTACT 57.337 33.333 0.00 0.00 35.50 2.57
2458 2876 9.880157 TGAGTGTAATTTGGGTAAATACTACTC 57.120 33.333 0.00 0.00 35.50 2.59
2459 2877 9.322773 GAGTGTAATTTGGGTAAATACTACTCC 57.677 37.037 0.00 0.00 35.50 3.85
2460 2878 8.270030 AGTGTAATTTGGGTAAATACTACTCCC 58.730 37.037 0.00 0.00 35.50 4.30
2461 2879 8.270030 GTGTAATTTGGGTAAATACTACTCCCT 58.730 37.037 0.00 0.00 35.50 4.20
2462 2880 8.488668 TGTAATTTGGGTAAATACTACTCCCTC 58.511 37.037 0.00 0.00 35.50 4.30
2463 2881 5.603170 TTTGGGTAAATACTACTCCCTCG 57.397 43.478 0.00 0.00 38.95 4.63
2464 2882 3.569491 TGGGTAAATACTACTCCCTCGG 58.431 50.000 0.00 0.00 38.95 4.63
2465 2883 3.052642 TGGGTAAATACTACTCCCTCGGT 60.053 47.826 0.00 0.00 38.95 4.69
2466 2884 3.571828 GGGTAAATACTACTCCCTCGGTC 59.428 52.174 0.00 0.00 35.63 4.79
2467 2885 3.571828 GGTAAATACTACTCCCTCGGTCC 59.428 52.174 0.00 0.00 0.00 4.46
2468 2886 2.378378 AATACTACTCCCTCGGTCCC 57.622 55.000 0.00 0.00 0.00 4.46
2469 2887 1.229131 ATACTACTCCCTCGGTCCCA 58.771 55.000 0.00 0.00 0.00 4.37
2470 2888 1.229131 TACTACTCCCTCGGTCCCAT 58.771 55.000 0.00 0.00 0.00 4.00
2471 2889 1.229131 ACTACTCCCTCGGTCCCATA 58.771 55.000 0.00 0.00 0.00 2.74
2472 2890 1.572415 ACTACTCCCTCGGTCCCATAA 59.428 52.381 0.00 0.00 0.00 1.90
2473 2891 2.179424 ACTACTCCCTCGGTCCCATAAT 59.821 50.000 0.00 0.00 0.00 1.28
2474 2892 1.424638 ACTCCCTCGGTCCCATAATG 58.575 55.000 0.00 0.00 0.00 1.90
2475 2893 1.344087 ACTCCCTCGGTCCCATAATGT 60.344 52.381 0.00 0.00 0.00 2.71
2476 2894 2.090943 ACTCCCTCGGTCCCATAATGTA 60.091 50.000 0.00 0.00 0.00 2.29
2477 2895 2.969950 CTCCCTCGGTCCCATAATGTAA 59.030 50.000 0.00 0.00 0.00 2.41
2478 2896 2.969950 TCCCTCGGTCCCATAATGTAAG 59.030 50.000 0.00 0.00 0.00 2.34
2479 2897 2.969950 CCCTCGGTCCCATAATGTAAGA 59.030 50.000 0.00 0.00 0.00 2.10
2480 2898 3.244112 CCCTCGGTCCCATAATGTAAGAC 60.244 52.174 0.00 0.00 0.00 3.01
2481 2899 3.552273 CCTCGGTCCCATAATGTAAGACG 60.552 52.174 0.00 0.00 0.00 4.18
2482 2900 3.025978 TCGGTCCCATAATGTAAGACGT 58.974 45.455 0.00 0.00 0.00 4.34
2483 2901 3.448301 TCGGTCCCATAATGTAAGACGTT 59.552 43.478 0.00 0.00 0.00 3.99
2484 2902 4.081531 TCGGTCCCATAATGTAAGACGTTT 60.082 41.667 0.00 0.00 0.00 3.60
2485 2903 4.632688 CGGTCCCATAATGTAAGACGTTTT 59.367 41.667 0.00 0.00 0.00 2.43
2486 2904 5.122711 CGGTCCCATAATGTAAGACGTTTTT 59.877 40.000 0.00 0.00 0.00 1.94
2559 2977 7.048512 GGGAGTAGTACAGTGCATTATTCTTT 58.951 38.462 2.52 0.00 0.00 2.52
2560 2978 8.202137 GGGAGTAGTACAGTGCATTATTCTTTA 58.798 37.037 2.52 0.00 0.00 1.85
2561 2979 9.250624 GGAGTAGTACAGTGCATTATTCTTTAG 57.749 37.037 2.52 0.00 0.00 1.85
2580 2998 1.268899 AGTACCACTGAAAGGACGTCG 59.731 52.381 9.92 0.00 39.30 5.12
2584 3002 1.067846 CCACTGAAAGGACGTCGATCA 60.068 52.381 9.92 12.20 39.30 2.92
2594 3012 1.387084 GACGTCGATCAGCTTCAACAC 59.613 52.381 0.00 0.00 0.00 3.32
2603 3021 5.349817 CGATCAGCTTCAACACTAATCAGTT 59.650 40.000 0.00 0.00 30.46 3.16
2611 3029 7.148722 GCTTCAACACTAATCAGTTCAGTACTC 60.149 40.741 0.00 0.00 33.85 2.59
2612 3030 6.688578 TCAACACTAATCAGTTCAGTACTCC 58.311 40.000 0.00 0.00 33.85 3.85
2622 3040 4.221703 CAGTTCAGTACTCCTCCATGTTCT 59.778 45.833 0.00 0.00 33.85 3.01
2639 3057 8.694540 TCCATGTTCTTTTCTTTGATTGAAAGA 58.305 29.630 0.00 0.00 46.93 2.52
2672 3090 1.267806 CTTGTCCATGTGTGTTCTGCC 59.732 52.381 0.00 0.00 0.00 4.85
2693 3111 4.363999 CCGTTTCTATCTGGCTAACTGAG 58.636 47.826 0.00 0.00 0.00 3.35
2708 3126 1.824224 CTGAGGCTGACACTGGCAGA 61.824 60.000 23.66 0.00 35.39 4.26
2801 3219 2.161855 CTGCCATTTTGTAGACAGCCA 58.838 47.619 0.00 0.00 0.00 4.75
2873 3292 3.829728 ACTGTACCTTGGACTAGGAGT 57.170 47.619 6.81 0.00 38.73 3.85
2878 3297 1.903183 ACCTTGGACTAGGAGTTGAGC 59.097 52.381 6.81 0.00 38.73 4.26
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
40 41 1.264045 GCAGCTCTCCCTGGACTTCT 61.264 60.000 0.00 0.00 33.44 2.85
41 42 1.220477 GCAGCTCTCCCTGGACTTC 59.780 63.158 0.00 0.00 33.44 3.01
42 43 1.229464 AGCAGCTCTCCCTGGACTT 60.229 57.895 0.00 0.00 33.44 3.01
43 44 1.988956 CAGCAGCTCTCCCTGGACT 60.989 63.158 0.00 0.00 33.44 3.85
44 45 1.548357 TTCAGCAGCTCTCCCTGGAC 61.548 60.000 0.00 0.00 33.44 4.02
45 46 1.229304 TTCAGCAGCTCTCCCTGGA 60.229 57.895 0.00 0.00 33.44 3.86
46 47 1.221293 CTTCAGCAGCTCTCCCTGG 59.779 63.158 0.00 0.00 33.44 4.45
47 48 1.221293 CCTTCAGCAGCTCTCCCTG 59.779 63.158 0.00 0.00 35.93 4.45
48 49 1.994507 CCCTTCAGCAGCTCTCCCT 60.995 63.158 0.00 0.00 0.00 4.20
49 50 1.557269 TTCCCTTCAGCAGCTCTCCC 61.557 60.000 0.00 0.00 0.00 4.30
50 51 0.107752 CTTCCCTTCAGCAGCTCTCC 60.108 60.000 0.00 0.00 0.00 3.71
51 52 0.107752 CCTTCCCTTCAGCAGCTCTC 60.108 60.000 0.00 0.00 0.00 3.20
52 53 0.839853 ACCTTCCCTTCAGCAGCTCT 60.840 55.000 0.00 0.00 0.00 4.09
53 54 0.676151 CACCTTCCCTTCAGCAGCTC 60.676 60.000 0.00 0.00 0.00 4.09
54 55 1.377994 CACCTTCCCTTCAGCAGCT 59.622 57.895 0.00 0.00 0.00 4.24
55 56 1.676967 CCACCTTCCCTTCAGCAGC 60.677 63.158 0.00 0.00 0.00 5.25
56 57 1.001641 CCCACCTTCCCTTCAGCAG 60.002 63.158 0.00 0.00 0.00 4.24
57 58 3.170362 CCCACCTTCCCTTCAGCA 58.830 61.111 0.00 0.00 0.00 4.41
58 59 2.361737 GCCCACCTTCCCTTCAGC 60.362 66.667 0.00 0.00 0.00 4.26
59 60 2.045926 CGCCCACCTTCCCTTCAG 60.046 66.667 0.00 0.00 0.00 3.02
60 61 2.150719 TTCGCCCACCTTCCCTTCA 61.151 57.895 0.00 0.00 0.00 3.02
61 62 1.674651 GTTCGCCCACCTTCCCTTC 60.675 63.158 0.00 0.00 0.00 3.46
62 63 2.434774 GTTCGCCCACCTTCCCTT 59.565 61.111 0.00 0.00 0.00 3.95
63 64 3.647771 GGTTCGCCCACCTTCCCT 61.648 66.667 0.00 0.00 33.50 4.20
73 74 2.981977 TTCACTCGTGTGGGTTCGCC 62.982 60.000 16.88 0.00 43.94 5.54
74 75 1.155424 TTTCACTCGTGTGGGTTCGC 61.155 55.000 16.88 0.00 43.94 4.70
75 76 1.004292 GTTTTCACTCGTGTGGGTTCG 60.004 52.381 16.88 0.00 43.94 3.95
76 77 1.332686 GGTTTTCACTCGTGTGGGTTC 59.667 52.381 16.88 6.53 43.94 3.62
77 78 1.385528 GGTTTTCACTCGTGTGGGTT 58.614 50.000 16.88 0.00 43.94 4.11
78 79 0.464916 GGGTTTTCACTCGTGTGGGT 60.465 55.000 16.88 0.00 43.94 4.51
79 80 0.464735 TGGGTTTTCACTCGTGTGGG 60.465 55.000 16.88 0.00 43.94 4.61
80 81 1.384525 TTGGGTTTTCACTCGTGTGG 58.615 50.000 16.88 0.00 43.94 4.17
81 82 2.878406 AGATTGGGTTTTCACTCGTGTG 59.122 45.455 11.32 11.32 45.07 3.82
82 83 2.878406 CAGATTGGGTTTTCACTCGTGT 59.122 45.455 0.00 0.00 0.00 4.49
83 84 2.878406 ACAGATTGGGTTTTCACTCGTG 59.122 45.455 0.00 0.00 0.00 4.35
84 85 3.208747 ACAGATTGGGTTTTCACTCGT 57.791 42.857 0.00 0.00 0.00 4.18
85 86 4.315803 ACTACAGATTGGGTTTTCACTCG 58.684 43.478 0.00 0.00 0.00 4.18
86 87 5.048713 CCAACTACAGATTGGGTTTTCACTC 60.049 44.000 0.00 0.00 42.57 3.51
87 88 4.827284 CCAACTACAGATTGGGTTTTCACT 59.173 41.667 0.00 0.00 42.57 3.41
88 89 4.825085 TCCAACTACAGATTGGGTTTTCAC 59.175 41.667 4.03 0.00 45.73 3.18
89 90 5.055265 TCCAACTACAGATTGGGTTTTCA 57.945 39.130 4.03 0.00 45.73 2.69
90 91 5.105756 CCATCCAACTACAGATTGGGTTTTC 60.106 44.000 4.03 0.00 45.73 2.29
91 92 4.772100 CCATCCAACTACAGATTGGGTTTT 59.228 41.667 4.03 0.00 45.73 2.43
92 93 4.202673 ACCATCCAACTACAGATTGGGTTT 60.203 41.667 4.03 0.00 45.73 3.27
93 94 3.333680 ACCATCCAACTACAGATTGGGTT 59.666 43.478 4.03 0.00 45.73 4.11
94 95 2.919602 ACCATCCAACTACAGATTGGGT 59.080 45.455 4.03 0.00 45.73 4.51
95 96 3.652057 ACCATCCAACTACAGATTGGG 57.348 47.619 4.03 0.00 45.73 4.12
96 97 5.989477 TCTAACCATCCAACTACAGATTGG 58.011 41.667 0.00 0.00 46.86 3.16
97 98 6.051717 CCTCTAACCATCCAACTACAGATTG 58.948 44.000 0.00 0.00 0.00 2.67
98 99 5.131142 CCCTCTAACCATCCAACTACAGATT 59.869 44.000 0.00 0.00 0.00 2.40
99 100 4.656112 CCCTCTAACCATCCAACTACAGAT 59.344 45.833 0.00 0.00 0.00 2.90
100 101 4.030913 CCCTCTAACCATCCAACTACAGA 58.969 47.826 0.00 0.00 0.00 3.41
101 102 4.030913 TCCCTCTAACCATCCAACTACAG 58.969 47.826 0.00 0.00 0.00 2.74
102 103 3.773119 GTCCCTCTAACCATCCAACTACA 59.227 47.826 0.00 0.00 0.00 2.74
103 104 4.031611 AGTCCCTCTAACCATCCAACTAC 58.968 47.826 0.00 0.00 0.00 2.73
104 105 4.030913 CAGTCCCTCTAACCATCCAACTA 58.969 47.826 0.00 0.00 0.00 2.24
105 106 2.840651 CAGTCCCTCTAACCATCCAACT 59.159 50.000 0.00 0.00 0.00 3.16
106 107 2.572104 ACAGTCCCTCTAACCATCCAAC 59.428 50.000 0.00 0.00 0.00 3.77
107 108 2.571653 CACAGTCCCTCTAACCATCCAA 59.428 50.000 0.00 0.00 0.00 3.53
108 109 2.187958 CACAGTCCCTCTAACCATCCA 58.812 52.381 0.00 0.00 0.00 3.41
109 110 2.467880 TCACAGTCCCTCTAACCATCC 58.532 52.381 0.00 0.00 0.00 3.51
110 111 5.046950 GGATATCACAGTCCCTCTAACCATC 60.047 48.000 4.83 0.00 0.00 3.51
111 112 4.841246 GGATATCACAGTCCCTCTAACCAT 59.159 45.833 4.83 0.00 0.00 3.55
112 113 4.223953 GGATATCACAGTCCCTCTAACCA 58.776 47.826 4.83 0.00 0.00 3.67
113 114 4.875561 GGATATCACAGTCCCTCTAACC 57.124 50.000 4.83 0.00 0.00 2.85
121 122 0.398318 GGCTGGGGATATCACAGTCC 59.602 60.000 20.90 18.51 34.79 3.85
122 123 0.398318 GGGCTGGGGATATCACAGTC 59.602 60.000 20.90 19.49 36.17 3.51
123 124 0.327480 TGGGCTGGGGATATCACAGT 60.327 55.000 20.90 0.00 34.79 3.55
124 125 0.109342 GTGGGCTGGGGATATCACAG 59.891 60.000 17.64 17.64 35.40 3.66
125 126 1.352622 GGTGGGCTGGGGATATCACA 61.353 60.000 7.40 3.31 0.00 3.58
126 127 1.352622 TGGTGGGCTGGGGATATCAC 61.353 60.000 4.83 0.00 0.00 3.06
127 128 1.005423 TGGTGGGCTGGGGATATCA 59.995 57.895 4.83 0.00 0.00 2.15
128 129 1.763770 CTGGTGGGCTGGGGATATC 59.236 63.158 0.00 0.00 0.00 1.63
129 130 1.775877 CCTGGTGGGCTGGGGATAT 60.776 63.158 0.00 0.00 0.00 1.63
130 131 2.284211 ATCCTGGTGGGCTGGGGATA 62.284 60.000 0.00 0.00 35.34 2.59
131 132 3.683017 ATCCTGGTGGGCTGGGGAT 62.683 63.158 0.00 0.00 34.39 3.85
132 133 3.908712 AATCCTGGTGGGCTGGGGA 62.909 63.158 0.00 0.00 34.39 4.81
133 134 3.350163 AATCCTGGTGGGCTGGGG 61.350 66.667 0.00 0.00 34.39 4.96
134 135 2.153898 TTGAATCCTGGTGGGCTGGG 62.154 60.000 0.00 0.00 34.39 4.45
135 136 0.251742 TTTGAATCCTGGTGGGCTGG 60.252 55.000 0.00 0.00 34.39 4.85
136 137 1.753073 GATTTGAATCCTGGTGGGCTG 59.247 52.381 0.00 0.00 34.39 4.85
137 138 2.149973 GATTTGAATCCTGGTGGGCT 57.850 50.000 0.00 0.00 34.39 5.19
147 148 6.551385 AATGCGAGTATCAGGATTTGAATC 57.449 37.500 0.00 0.00 39.77 2.52
148 149 6.949352 AAATGCGAGTATCAGGATTTGAAT 57.051 33.333 0.00 0.00 37.87 2.57
149 150 8.450578 AATAAATGCGAGTATCAGGATTTGAA 57.549 30.769 5.43 0.00 38.89 2.69
150 151 7.173218 GGAATAAATGCGAGTATCAGGATTTGA 59.827 37.037 5.43 0.00 38.89 2.69
151 152 7.173907 AGGAATAAATGCGAGTATCAGGATTTG 59.826 37.037 5.43 0.00 38.89 2.32
152 153 7.173907 CAGGAATAAATGCGAGTATCAGGATTT 59.826 37.037 0.00 1.12 40.41 2.17
153 154 6.652481 CAGGAATAAATGCGAGTATCAGGATT 59.348 38.462 0.00 0.00 33.12 3.01
154 155 6.169094 CAGGAATAAATGCGAGTATCAGGAT 58.831 40.000 0.00 0.00 33.17 3.24
155 156 5.511373 CCAGGAATAAATGCGAGTATCAGGA 60.511 44.000 0.00 0.00 33.17 3.86
156 157 4.692625 CCAGGAATAAATGCGAGTATCAGG 59.307 45.833 0.00 0.00 33.17 3.86
157 158 5.541845 TCCAGGAATAAATGCGAGTATCAG 58.458 41.667 0.00 0.00 33.17 2.90
158 159 5.545063 TCCAGGAATAAATGCGAGTATCA 57.455 39.130 0.00 0.00 33.17 2.15
159 160 7.440523 AAATCCAGGAATAAATGCGAGTATC 57.559 36.000 0.00 0.00 0.00 2.24
160 161 9.520515 AATAAATCCAGGAATAAATGCGAGTAT 57.479 29.630 0.00 0.00 0.00 2.12
161 162 8.918202 AATAAATCCAGGAATAAATGCGAGTA 57.082 30.769 0.00 0.00 0.00 2.59
162 163 7.823745 AATAAATCCAGGAATAAATGCGAGT 57.176 32.000 0.00 0.00 0.00 4.18
163 164 8.352201 TGAAATAAATCCAGGAATAAATGCGAG 58.648 33.333 0.00 0.00 0.00 5.03
164 165 8.231692 TGAAATAAATCCAGGAATAAATGCGA 57.768 30.769 0.00 0.00 0.00 5.10
165 166 8.511465 CTGAAATAAATCCAGGAATAAATGCG 57.489 34.615 0.00 0.00 0.00 4.73
175 176 5.010012 CCGGAAATCCTGAAATAAATCCAGG 59.990 44.000 0.00 0.00 46.64 4.45
176 177 5.507985 GCCGGAAATCCTGAAATAAATCCAG 60.508 44.000 5.05 0.00 0.00 3.86
177 178 4.340950 GCCGGAAATCCTGAAATAAATCCA 59.659 41.667 5.05 0.00 0.00 3.41
178 179 4.556699 CGCCGGAAATCCTGAAATAAATCC 60.557 45.833 5.05 0.00 0.00 3.01
179 180 4.274950 TCGCCGGAAATCCTGAAATAAATC 59.725 41.667 5.05 0.00 0.00 2.17
180 181 4.204012 TCGCCGGAAATCCTGAAATAAAT 58.796 39.130 5.05 0.00 0.00 1.40
181 182 3.611970 TCGCCGGAAATCCTGAAATAAA 58.388 40.909 5.05 0.00 0.00 1.40
182 183 3.269538 TCGCCGGAAATCCTGAAATAA 57.730 42.857 5.05 0.00 0.00 1.40
183 184 2.992124 TCGCCGGAAATCCTGAAATA 57.008 45.000 5.05 0.00 0.00 1.40
184 185 1.949525 CATCGCCGGAAATCCTGAAAT 59.050 47.619 5.05 0.00 0.00 2.17
185 186 1.378531 CATCGCCGGAAATCCTGAAA 58.621 50.000 5.05 0.00 0.00 2.69
186 187 1.095228 GCATCGCCGGAAATCCTGAA 61.095 55.000 5.05 0.00 0.00 3.02
187 188 1.523711 GCATCGCCGGAAATCCTGA 60.524 57.895 5.05 0.00 0.00 3.86
188 189 2.885676 CGCATCGCCGGAAATCCTG 61.886 63.158 5.05 0.00 0.00 3.86
189 190 2.588877 CGCATCGCCGGAAATCCT 60.589 61.111 5.05 0.00 0.00 3.24
200 201 1.769098 CTCCCACTGAATGCGCATCG 61.769 60.000 25.53 17.09 0.00 3.84
201 202 1.442526 CCTCCCACTGAATGCGCATC 61.443 60.000 25.53 17.12 0.00 3.91
202 203 1.452651 CCTCCCACTGAATGCGCAT 60.453 57.895 19.28 19.28 0.00 4.73
203 204 2.046023 CCTCCCACTGAATGCGCA 60.046 61.111 14.96 14.96 0.00 6.09
204 205 1.817099 CTCCTCCCACTGAATGCGC 60.817 63.158 0.00 0.00 0.00 6.09
205 206 0.460987 GTCTCCTCCCACTGAATGCG 60.461 60.000 0.00 0.00 0.00 4.73
206 207 0.460987 CGTCTCCTCCCACTGAATGC 60.461 60.000 0.00 0.00 0.00 3.56
207 208 0.898320 ACGTCTCCTCCCACTGAATG 59.102 55.000 0.00 0.00 0.00 2.67
208 209 1.550976 GAACGTCTCCTCCCACTGAAT 59.449 52.381 0.00 0.00 0.00 2.57
209 210 0.966920 GAACGTCTCCTCCCACTGAA 59.033 55.000 0.00 0.00 0.00 3.02
210 211 0.898789 GGAACGTCTCCTCCCACTGA 60.899 60.000 8.87 0.00 41.61 3.41
211 212 1.592223 GGAACGTCTCCTCCCACTG 59.408 63.158 8.87 0.00 41.61 3.66
212 213 4.115270 GGAACGTCTCCTCCCACT 57.885 61.111 8.87 0.00 41.61 4.00
233 234 4.883300 GTAGGCGCCTCGTCGTCG 62.883 72.222 36.73 0.00 39.34 5.12
234 235 4.883300 CGTAGGCGCCTCGTCGTC 62.883 72.222 36.73 15.88 36.23 4.20
236 237 3.950254 ATCGTAGGCGCCTCGTCG 61.950 66.667 36.73 32.16 36.23 5.12
237 238 2.353607 CATCGTAGGCGCCTCGTC 60.354 66.667 36.73 22.80 38.14 4.20
238 239 2.827190 TCATCGTAGGCGCCTCGT 60.827 61.111 36.73 21.23 38.14 4.18
239 240 2.337749 AAGTCATCGTAGGCGCCTCG 62.338 60.000 36.73 32.58 38.14 4.63
240 241 0.595310 GAAGTCATCGTAGGCGCCTC 60.595 60.000 36.73 23.04 38.14 4.70
241 242 1.437986 GAAGTCATCGTAGGCGCCT 59.562 57.895 34.85 34.85 38.14 5.52
242 243 1.944676 CGAAGTCATCGTAGGCGCC 60.945 63.158 21.89 21.89 46.52 6.53
243 244 3.601981 CGAAGTCATCGTAGGCGC 58.398 61.111 0.00 0.00 46.52 6.53
250 251 6.693113 TCATCTTGAGATTTACGAAGTCATCG 59.307 38.462 0.00 0.00 44.39 3.84
251 252 7.993821 TCATCTTGAGATTTACGAAGTCATC 57.006 36.000 0.00 0.00 35.39 2.92
253 254 9.468532 CATATCATCTTGAGATTTACGAAGTCA 57.531 33.333 0.00 0.00 35.39 3.41
254 255 8.431593 GCATATCATCTTGAGATTTACGAAGTC 58.568 37.037 0.00 0.00 35.39 3.01
255 256 7.386299 GGCATATCATCTTGAGATTTACGAAGT 59.614 37.037 0.00 0.00 37.29 3.01
256 257 7.411264 CGGCATATCATCTTGAGATTTACGAAG 60.411 40.741 0.00 0.00 31.21 3.79
257 258 6.366061 CGGCATATCATCTTGAGATTTACGAA 59.634 38.462 0.00 0.00 31.21 3.85
258 259 5.863935 CGGCATATCATCTTGAGATTTACGA 59.136 40.000 0.00 0.00 31.21 3.43
259 260 5.062683 CCGGCATATCATCTTGAGATTTACG 59.937 44.000 0.00 0.00 31.21 3.18
260 261 5.163814 GCCGGCATATCATCTTGAGATTTAC 60.164 44.000 24.80 0.00 31.21 2.01
261 262 4.937620 GCCGGCATATCATCTTGAGATTTA 59.062 41.667 24.80 0.00 31.21 1.40
262 263 3.755378 GCCGGCATATCATCTTGAGATTT 59.245 43.478 24.80 0.00 31.21 2.17
263 264 3.008813 AGCCGGCATATCATCTTGAGATT 59.991 43.478 31.54 0.00 31.21 2.40
264 265 2.570752 AGCCGGCATATCATCTTGAGAT 59.429 45.455 31.54 0.00 34.56 2.75
265 266 1.973515 AGCCGGCATATCATCTTGAGA 59.026 47.619 31.54 0.00 0.00 3.27
266 267 2.289257 TGAGCCGGCATATCATCTTGAG 60.289 50.000 31.54 0.00 0.00 3.02
267 268 1.693606 TGAGCCGGCATATCATCTTGA 59.306 47.619 31.54 0.00 0.00 3.02
268 269 2.074576 CTGAGCCGGCATATCATCTTG 58.925 52.381 31.54 7.95 0.00 3.02
269 270 1.696336 ACTGAGCCGGCATATCATCTT 59.304 47.619 31.54 3.33 0.00 2.40
270 271 1.274728 GACTGAGCCGGCATATCATCT 59.725 52.381 31.54 11.40 0.00 2.90
271 272 1.274728 AGACTGAGCCGGCATATCATC 59.725 52.381 31.54 19.98 0.00 2.92
272 273 1.346062 AGACTGAGCCGGCATATCAT 58.654 50.000 31.54 13.17 0.00 2.45
273 274 1.123077 AAGACTGAGCCGGCATATCA 58.877 50.000 31.54 22.44 0.00 2.15
274 275 2.139118 GAAAGACTGAGCCGGCATATC 58.861 52.381 31.54 18.63 0.00 1.63
275 276 1.539065 CGAAAGACTGAGCCGGCATAT 60.539 52.381 31.54 8.11 0.00 1.78
276 277 0.179111 CGAAAGACTGAGCCGGCATA 60.179 55.000 31.54 16.21 0.00 3.14
277 278 1.448540 CGAAAGACTGAGCCGGCAT 60.449 57.895 31.54 14.28 0.00 4.40
278 279 2.048222 CGAAAGACTGAGCCGGCA 60.048 61.111 31.54 7.98 0.00 5.69
279 280 2.815647 CCGAAAGACTGAGCCGGC 60.816 66.667 21.89 21.89 33.47 6.13
280 281 1.153745 CTCCGAAAGACTGAGCCGG 60.154 63.158 0.00 0.00 41.36 6.13
281 282 1.153745 CCTCCGAAAGACTGAGCCG 60.154 63.158 0.00 0.00 0.00 5.52
282 283 1.448717 GCCTCCGAAAGACTGAGCC 60.449 63.158 0.00 0.00 0.00 4.70
283 284 1.807573 CGCCTCCGAAAGACTGAGC 60.808 63.158 0.00 0.00 36.29 4.26
284 285 1.807573 GCGCCTCCGAAAGACTGAG 60.808 63.158 0.00 0.00 36.29 3.35
285 286 2.214181 GAGCGCCTCCGAAAGACTGA 62.214 60.000 2.29 0.00 36.29 3.41
286 287 1.807573 GAGCGCCTCCGAAAGACTG 60.808 63.158 2.29 0.00 36.29 3.51
287 288 2.574399 GAGCGCCTCCGAAAGACT 59.426 61.111 2.29 0.00 36.29 3.24
288 289 2.262471 TACGAGCGCCTCCGAAAGAC 62.262 60.000 18.88 0.00 36.29 3.01
289 290 1.989966 CTACGAGCGCCTCCGAAAGA 61.990 60.000 18.88 3.29 36.29 2.52
290 291 1.586564 CTACGAGCGCCTCCGAAAG 60.587 63.158 18.88 12.17 36.29 2.62
291 292 1.989966 CTCTACGAGCGCCTCCGAAA 61.990 60.000 18.88 7.49 36.29 3.46
292 293 2.437180 TCTACGAGCGCCTCCGAA 60.437 61.111 18.88 3.90 36.29 4.30
293 294 2.661840 ATCTCTACGAGCGCCTCCGA 62.662 60.000 18.88 3.09 36.29 4.55
294 295 0.949588 TATCTCTACGAGCGCCTCCG 60.950 60.000 2.29 8.50 37.57 4.63
295 296 0.800012 CTATCTCTACGAGCGCCTCC 59.200 60.000 2.29 0.00 0.00 4.30
296 297 0.800012 CCTATCTCTACGAGCGCCTC 59.200 60.000 2.29 0.00 0.00 4.70
297 298 0.606944 CCCTATCTCTACGAGCGCCT 60.607 60.000 2.29 0.00 0.00 5.52
298 299 0.890090 ACCCTATCTCTACGAGCGCC 60.890 60.000 2.29 0.00 0.00 6.53
299 300 0.238817 CACCCTATCTCTACGAGCGC 59.761 60.000 0.00 0.00 0.00 5.92
300 301 1.264557 CACACCCTATCTCTACGAGCG 59.735 57.143 0.00 0.00 0.00 5.03
301 302 1.001158 GCACACCCTATCTCTACGAGC 60.001 57.143 0.00 0.00 0.00 5.03
302 303 1.264557 CGCACACCCTATCTCTACGAG 59.735 57.143 0.00 0.00 0.00 4.18
303 304 1.306148 CGCACACCCTATCTCTACGA 58.694 55.000 0.00 0.00 0.00 3.43
304 305 1.022735 ACGCACACCCTATCTCTACG 58.977 55.000 0.00 0.00 0.00 3.51
305 306 1.749634 ACACGCACACCCTATCTCTAC 59.250 52.381 0.00 0.00 0.00 2.59
306 307 1.749063 CACACGCACACCCTATCTCTA 59.251 52.381 0.00 0.00 0.00 2.43
307 308 0.532573 CACACGCACACCCTATCTCT 59.467 55.000 0.00 0.00 0.00 3.10
308 309 0.246635 ACACACGCACACCCTATCTC 59.753 55.000 0.00 0.00 0.00 2.75
309 310 0.037326 CACACACGCACACCCTATCT 60.037 55.000 0.00 0.00 0.00 1.98
310 311 1.635663 GCACACACGCACACCCTATC 61.636 60.000 0.00 0.00 0.00 2.08
311 312 1.671054 GCACACACGCACACCCTAT 60.671 57.895 0.00 0.00 0.00 2.57
312 313 2.280524 GCACACACGCACACCCTA 60.281 61.111 0.00 0.00 0.00 3.53
315 316 3.783588 GAACGCACACACGCACACC 62.784 63.158 0.00 0.00 36.19 4.16
316 317 2.350760 GAACGCACACACGCACAC 60.351 61.111 0.00 0.00 36.19 3.82
317 318 0.876342 TATGAACGCACACACGCACA 60.876 50.000 0.00 0.00 36.19 4.57
318 319 0.179250 CTATGAACGCACACACGCAC 60.179 55.000 0.00 0.00 36.19 5.34
319 320 1.288419 CCTATGAACGCACACACGCA 61.288 55.000 0.00 0.00 36.19 5.24
320 321 1.419922 CCTATGAACGCACACACGC 59.580 57.895 0.00 0.00 36.19 5.34
321 322 1.358725 CCCCTATGAACGCACACACG 61.359 60.000 0.00 0.00 39.50 4.49
322 323 0.321298 ACCCCTATGAACGCACACAC 60.321 55.000 0.00 0.00 0.00 3.82
323 324 0.321210 CACCCCTATGAACGCACACA 60.321 55.000 0.00 0.00 0.00 3.72
324 325 0.036765 TCACCCCTATGAACGCACAC 60.037 55.000 0.00 0.00 0.00 3.82
325 326 0.249120 CTCACCCCTATGAACGCACA 59.751 55.000 0.00 0.00 0.00 4.57
326 327 0.249398 ACTCACCCCTATGAACGCAC 59.751 55.000 0.00 0.00 0.00 5.34
327 328 0.249120 CACTCACCCCTATGAACGCA 59.751 55.000 0.00 0.00 0.00 5.24
328 329 0.249398 ACACTCACCCCTATGAACGC 59.751 55.000 0.00 0.00 0.00 4.84
329 330 1.275291 ACACACTCACCCCTATGAACG 59.725 52.381 0.00 0.00 0.00 3.95
330 331 2.699954 CACACACTCACCCCTATGAAC 58.300 52.381 0.00 0.00 0.00 3.18
331 332 1.003118 GCACACACTCACCCCTATGAA 59.997 52.381 0.00 0.00 0.00 2.57
332 333 0.613260 GCACACACTCACCCCTATGA 59.387 55.000 0.00 0.00 0.00 2.15
333 334 0.740868 CGCACACACTCACCCCTATG 60.741 60.000 0.00 0.00 0.00 2.23
334 335 1.596934 CGCACACACTCACCCCTAT 59.403 57.895 0.00 0.00 0.00 2.57
335 336 3.056458 CGCACACACTCACCCCTA 58.944 61.111 0.00 0.00 0.00 3.53
336 337 4.626081 GCGCACACACTCACCCCT 62.626 66.667 0.30 0.00 0.00 4.79
339 340 4.000557 CACGCGCACACACTCACC 62.001 66.667 5.73 0.00 0.00 4.02
340 341 1.282248 ATACACGCGCACACACTCAC 61.282 55.000 5.73 0.00 0.00 3.51
341 342 0.241481 TATACACGCGCACACACTCA 59.759 50.000 5.73 0.00 0.00 3.41
342 343 1.255342 CATATACACGCGCACACACTC 59.745 52.381 5.73 0.00 0.00 3.51
343 344 1.135228 TCATATACACGCGCACACACT 60.135 47.619 5.73 0.00 0.00 3.55
344 345 1.255342 CTCATATACACGCGCACACAC 59.745 52.381 5.73 0.00 0.00 3.82
345 346 1.555477 CTCATATACACGCGCACACA 58.445 50.000 5.73 0.00 0.00 3.72
346 347 0.229753 GCTCATATACACGCGCACAC 59.770 55.000 5.73 0.00 0.00 3.82
347 348 1.206115 CGCTCATATACACGCGCACA 61.206 55.000 5.73 0.00 39.11 4.57
348 349 1.482955 CGCTCATATACACGCGCAC 59.517 57.895 5.73 0.00 39.11 5.34
349 350 3.916439 CGCTCATATACACGCGCA 58.084 55.556 5.73 0.00 39.11 6.09
353 354 2.193447 ACACAAGCGCTCATATACACG 58.807 47.619 12.06 0.00 0.00 4.49
354 355 4.334443 CAAACACAAGCGCTCATATACAC 58.666 43.478 12.06 0.00 0.00 2.90
355 356 3.181511 GCAAACACAAGCGCTCATATACA 60.182 43.478 12.06 0.00 0.00 2.29
356 357 3.354397 GCAAACACAAGCGCTCATATAC 58.646 45.455 12.06 0.00 0.00 1.47
357 358 2.354510 GGCAAACACAAGCGCTCATATA 59.645 45.455 12.06 0.00 0.00 0.86
358 359 1.133025 GGCAAACACAAGCGCTCATAT 59.867 47.619 12.06 0.00 0.00 1.78
359 360 0.521291 GGCAAACACAAGCGCTCATA 59.479 50.000 12.06 0.00 0.00 2.15
360 361 1.174712 AGGCAAACACAAGCGCTCAT 61.175 50.000 12.06 0.00 0.00 2.90
361 362 0.533978 TAGGCAAACACAAGCGCTCA 60.534 50.000 12.06 0.00 0.00 4.26
362 363 0.591170 TTAGGCAAACACAAGCGCTC 59.409 50.000 12.06 0.00 0.00 5.03
363 364 1.068333 CATTAGGCAAACACAAGCGCT 60.068 47.619 2.64 2.64 0.00 5.92
364 365 1.335872 ACATTAGGCAAACACAAGCGC 60.336 47.619 0.00 0.00 0.00 5.92
365 366 2.704725 ACATTAGGCAAACACAAGCG 57.295 45.000 0.00 0.00 0.00 4.68
366 367 3.976169 TGAACATTAGGCAAACACAAGC 58.024 40.909 0.00 0.00 0.00 4.01
367 368 6.900568 TTTTGAACATTAGGCAAACACAAG 57.099 33.333 0.00 0.00 31.89 3.16
390 391 3.551846 ACACTCGGTGACCATTCTTTTT 58.448 40.909 1.11 0.00 36.96 1.94
391 392 3.139077 GACACTCGGTGACCATTCTTTT 58.861 45.455 1.11 0.00 36.96 2.27
392 393 2.104111 TGACACTCGGTGACCATTCTTT 59.896 45.455 1.11 0.00 36.96 2.52
393 394 1.691976 TGACACTCGGTGACCATTCTT 59.308 47.619 1.11 0.00 36.96 2.52
419 420 4.096382 GTCTGCAGGAAAAGAACAAAGACA 59.904 41.667 15.13 0.00 33.41 3.41
430 431 2.031120 CCTTGGTTGTCTGCAGGAAAA 58.969 47.619 15.13 3.14 0.00 2.29
450 451 1.200948 GAAGTTCTGCCCTGCAACATC 59.799 52.381 0.00 0.00 38.41 3.06
451 452 1.202976 AGAAGTTCTGCCCTGCAACAT 60.203 47.619 4.10 0.00 38.41 2.71
452 453 0.183492 AGAAGTTCTGCCCTGCAACA 59.817 50.000 4.10 0.00 38.41 3.33
453 454 0.877743 GAGAAGTTCTGCCCTGCAAC 59.122 55.000 10.90 0.00 38.41 4.17
454 455 0.603707 CGAGAAGTTCTGCCCTGCAA 60.604 55.000 10.90 0.00 38.41 4.08
455 456 1.004560 CGAGAAGTTCTGCCCTGCA 60.005 57.895 10.90 0.00 36.92 4.41
456 457 0.603975 AACGAGAAGTTCTGCCCTGC 60.604 55.000 10.90 0.00 39.16 4.85
457 458 1.884235 AAACGAGAAGTTCTGCCCTG 58.116 50.000 10.90 0.00 43.37 4.45
458 459 2.618709 CAAAAACGAGAAGTTCTGCCCT 59.381 45.455 10.90 0.00 43.37 5.19
459 460 2.357952 ACAAAAACGAGAAGTTCTGCCC 59.642 45.455 10.90 0.00 43.37 5.36
460 461 3.181500 ACACAAAAACGAGAAGTTCTGCC 60.181 43.478 10.90 0.00 43.37 4.85
461 462 4.016113 ACACAAAAACGAGAAGTTCTGC 57.984 40.909 10.90 1.33 43.37 4.26
462 463 5.470845 AGACACAAAAACGAGAAGTTCTG 57.529 39.130 10.90 5.50 43.37 3.02
463 464 5.875359 AGAAGACACAAAAACGAGAAGTTCT 59.125 36.000 4.68 4.68 43.37 3.01
464 465 6.108097 AGAAGACACAAAAACGAGAAGTTC 57.892 37.500 0.00 0.00 43.37 3.01
465 466 7.254795 CCATAGAAGACACAAAAACGAGAAGTT 60.255 37.037 0.00 0.00 46.76 2.66
466 467 6.202954 CCATAGAAGACACAAAAACGAGAAGT 59.797 38.462 0.00 0.00 0.00 3.01
467 468 6.347725 CCCATAGAAGACACAAAAACGAGAAG 60.348 42.308 0.00 0.00 0.00 2.85
468 469 5.468746 CCCATAGAAGACACAAAAACGAGAA 59.531 40.000 0.00 0.00 0.00 2.87
500 502 0.506932 CGTTGTCTCGACGCATTTGT 59.493 50.000 0.00 0.00 34.44 2.83
506 508 0.566593 GCTTATCGTTGTCTCGACGC 59.433 55.000 4.86 0.00 42.56 5.19
508 510 2.273370 TGGCTTATCGTTGTCTCGAC 57.727 50.000 0.00 0.00 42.56 4.20
511 513 3.325230 GCAATGGCTTATCGTTGTCTC 57.675 47.619 0.00 0.00 36.37 3.36
610 612 0.034767 TAGACGTCGTGAGGGATGGT 60.035 55.000 10.46 0.00 0.00 3.55
679 683 1.772063 AATGCGCCGCGTATTTCCTC 61.772 55.000 21.38 0.00 38.87 3.71
693 699 0.817634 TAAGGAATGGGCCGAATGCG 60.818 55.000 0.00 0.00 42.61 4.73
694 700 0.954452 CTAAGGAATGGGCCGAATGC 59.046 55.000 0.00 0.00 40.16 3.56
868 874 2.111251 GTAATGGAGGGCGAGGGC 59.889 66.667 0.00 0.00 38.90 5.19
871 877 1.417890 AGATTGGTAATGGAGGGCGAG 59.582 52.381 0.00 0.00 0.00 5.03
872 878 1.507140 AGATTGGTAATGGAGGGCGA 58.493 50.000 0.00 0.00 0.00 5.54
874 880 2.587522 GGAAGATTGGTAATGGAGGGC 58.412 52.381 0.00 0.00 0.00 5.19
943 961 0.389426 CCTACGTCGGTTCTTGGGTG 60.389 60.000 0.00 0.00 0.00 4.61
971 989 0.946528 TCGTCGGTTCTTCTCGTTGA 59.053 50.000 0.00 0.00 0.00 3.18
1283 1343 4.222847 GCGACACCCCGATCTCCC 62.223 72.222 0.00 0.00 0.00 4.30
1413 1473 4.194720 GCGATCCAGGACGCGTCT 62.195 66.667 35.50 20.42 44.91 4.18
1473 1533 1.445582 CAGGCGGGTGTCGTAAGTC 60.446 63.158 0.00 0.00 41.72 3.01
1476 1536 2.652530 GTCAGGCGGGTGTCGTAA 59.347 61.111 0.00 0.00 41.72 3.18
1927 1987 5.482175 GCAGTCCTACTATAATGGAGGTCAT 59.518 44.000 0.00 0.00 37.79 3.06
1929 1989 4.833380 TGCAGTCCTACTATAATGGAGGTC 59.167 45.833 0.00 0.00 0.00 3.85
1930 1990 4.589374 GTGCAGTCCTACTATAATGGAGGT 59.411 45.833 0.00 0.00 0.00 3.85
1970 2030 1.076533 GCTTCAGCATGCATGTGTGC 61.077 55.000 26.79 22.69 45.57 4.57
2064 2128 3.762407 TCACACTGAATTTCTCCGGAA 57.238 42.857 5.23 0.00 0.00 4.30
2209 2277 8.889717 GCAAAATATCTTGCCAAAGTACTAGTA 58.110 33.333 2.09 0.00 44.88 1.82
2210 2278 7.762382 GCAAAATATCTTGCCAAAGTACTAGT 58.238 34.615 2.09 0.00 44.88 2.57
2259 2327 3.801050 CCACGTGCATTTAGATCTCTCTG 59.199 47.826 10.91 0.00 32.66 3.35
2311 2379 5.627499 TCACTGGTATTGTTGCTTCAATC 57.373 39.130 9.45 4.00 38.68 2.67
2312 2380 5.711506 TCATCACTGGTATTGTTGCTTCAAT 59.288 36.000 10.60 10.60 40.50 2.57
2320 2389 7.012704 GTGCTCATATTCATCACTGGTATTGTT 59.987 37.037 0.00 0.00 0.00 2.83
2322 2391 6.709397 AGTGCTCATATTCATCACTGGTATTG 59.291 38.462 0.00 0.00 36.72 1.90
2365 2482 5.238583 AGTAACTTGTATGAGTCACCTTGC 58.761 41.667 0.00 0.00 0.00 4.01
2366 2483 5.869888 GGAGTAACTTGTATGAGTCACCTTG 59.130 44.000 0.00 0.00 0.00 3.61
2367 2484 5.046520 GGGAGTAACTTGTATGAGTCACCTT 60.047 44.000 0.00 0.00 0.00 3.50
2369 2486 4.222145 TGGGAGTAACTTGTATGAGTCACC 59.778 45.833 0.00 0.00 0.00 4.02
2371 2488 6.440647 AGAATGGGAGTAACTTGTATGAGTCA 59.559 38.462 0.00 0.00 0.00 3.41
2372 2489 6.758886 CAGAATGGGAGTAACTTGTATGAGTC 59.241 42.308 0.00 0.00 0.00 3.36
2374 2491 6.644347 ACAGAATGGGAGTAACTTGTATGAG 58.356 40.000 0.00 0.00 43.62 2.90
2375 2492 6.620877 ACAGAATGGGAGTAACTTGTATGA 57.379 37.500 0.00 0.00 43.62 2.15
2389 2807 3.592059 CTGCATTTTCCAACAGAATGGG 58.408 45.455 0.00 0.00 43.62 4.00
2390 2808 3.007182 ACCTGCATTTTCCAACAGAATGG 59.993 43.478 0.00 0.00 43.62 3.16
2391 2809 4.261578 ACCTGCATTTTCCAACAGAATG 57.738 40.909 0.00 0.00 46.00 2.67
2393 2811 5.860941 TTAACCTGCATTTTCCAACAGAA 57.139 34.783 0.00 0.00 31.67 3.02
2394 2812 6.418057 AATTAACCTGCATTTTCCAACAGA 57.582 33.333 0.00 0.00 31.67 3.41
2395 2813 8.776376 ATTAATTAACCTGCATTTTCCAACAG 57.224 30.769 0.00 0.00 0.00 3.16
2396 2814 9.213799 GAATTAATTAACCTGCATTTTCCAACA 57.786 29.630 0.00 0.00 0.00 3.33
2405 2823 5.221702 GGCCATGGAATTAATTAACCTGCAT 60.222 40.000 18.40 5.34 0.00 3.96
2418 2836 0.680921 CACTCACCGGCCATGGAATT 60.681 55.000 18.40 0.00 0.00 2.17
2419 2837 1.077501 CACTCACCGGCCATGGAAT 60.078 57.895 18.40 0.00 0.00 3.01
2420 2838 1.195442 TACACTCACCGGCCATGGAA 61.195 55.000 18.40 0.00 0.00 3.53
2421 2839 1.195442 TTACACTCACCGGCCATGGA 61.195 55.000 18.40 0.00 0.00 3.41
2422 2840 0.107214 ATTACACTCACCGGCCATGG 60.107 55.000 7.63 7.63 0.00 3.66
2429 2847 5.890424 ATTTACCCAAATTACACTCACCG 57.110 39.130 0.00 0.00 29.80 4.94
2446 2864 3.571828 GGGACCGAGGGAGTAGTATTTAC 59.428 52.174 0.00 0.00 0.00 2.01
2450 2868 1.229131 TGGGACCGAGGGAGTAGTAT 58.771 55.000 0.00 0.00 0.00 2.12
2451 2869 1.229131 ATGGGACCGAGGGAGTAGTA 58.771 55.000 0.00 0.00 0.00 1.82
2452 2870 1.229131 TATGGGACCGAGGGAGTAGT 58.771 55.000 0.00 0.00 0.00 2.73
2453 2871 2.376695 TTATGGGACCGAGGGAGTAG 57.623 55.000 0.00 0.00 0.00 2.57
2454 2872 2.090943 ACATTATGGGACCGAGGGAGTA 60.091 50.000 0.00 0.00 0.00 2.59
2455 2873 1.344087 ACATTATGGGACCGAGGGAGT 60.344 52.381 0.00 0.00 0.00 3.85
2456 2874 1.424638 ACATTATGGGACCGAGGGAG 58.575 55.000 0.00 0.00 0.00 4.30
2457 2875 2.779429 TACATTATGGGACCGAGGGA 57.221 50.000 0.00 0.00 0.00 4.20
2458 2876 2.969950 TCTTACATTATGGGACCGAGGG 59.030 50.000 0.00 0.00 0.00 4.30
2459 2877 3.552273 CGTCTTACATTATGGGACCGAGG 60.552 52.174 0.00 0.00 0.00 4.63
2460 2878 3.067742 ACGTCTTACATTATGGGACCGAG 59.932 47.826 0.00 0.00 0.00 4.63
2461 2879 3.025978 ACGTCTTACATTATGGGACCGA 58.974 45.455 0.00 0.00 0.00 4.69
2462 2880 3.447918 ACGTCTTACATTATGGGACCG 57.552 47.619 0.00 0.00 0.00 4.79
2463 2881 6.505044 AAAAACGTCTTACATTATGGGACC 57.495 37.500 0.00 0.00 0.00 4.46
2508 2926 8.278729 TCCGTCCCGTAATATAAAATGTTTTT 57.721 30.769 0.00 0.00 0.00 1.94
2509 2927 7.012610 CCTCCGTCCCGTAATATAAAATGTTTT 59.987 37.037 0.00 0.00 0.00 2.43
2510 2928 6.484308 CCTCCGTCCCGTAATATAAAATGTTT 59.516 38.462 0.00 0.00 0.00 2.83
2511 2929 5.993441 CCTCCGTCCCGTAATATAAAATGTT 59.007 40.000 0.00 0.00 0.00 2.71
2512 2930 5.511888 CCCTCCGTCCCGTAATATAAAATGT 60.512 44.000 0.00 0.00 0.00 2.71
2513 2931 4.933400 CCCTCCGTCCCGTAATATAAAATG 59.067 45.833 0.00 0.00 0.00 2.32
2514 2932 4.840115 TCCCTCCGTCCCGTAATATAAAAT 59.160 41.667 0.00 0.00 0.00 1.82
2515 2933 4.222336 TCCCTCCGTCCCGTAATATAAAA 58.778 43.478 0.00 0.00 0.00 1.52
2516 2934 3.828451 CTCCCTCCGTCCCGTAATATAAA 59.172 47.826 0.00 0.00 0.00 1.40
2517 2935 3.181429 ACTCCCTCCGTCCCGTAATATAA 60.181 47.826 0.00 0.00 0.00 0.98
2518 2936 2.376518 ACTCCCTCCGTCCCGTAATATA 59.623 50.000 0.00 0.00 0.00 0.86
2519 2937 1.146566 ACTCCCTCCGTCCCGTAATAT 59.853 52.381 0.00 0.00 0.00 1.28
2520 2938 0.552848 ACTCCCTCCGTCCCGTAATA 59.447 55.000 0.00 0.00 0.00 0.98
2521 2939 0.552848 TACTCCCTCCGTCCCGTAAT 59.447 55.000 0.00 0.00 0.00 1.89
2522 2940 0.107017 CTACTCCCTCCGTCCCGTAA 60.107 60.000 0.00 0.00 0.00 3.18
2523 2941 1.274703 ACTACTCCCTCCGTCCCGTA 61.275 60.000 0.00 0.00 0.00 4.02
2524 2942 1.274703 TACTACTCCCTCCGTCCCGT 61.275 60.000 0.00 0.00 0.00 5.28
2525 2943 0.817229 GTACTACTCCCTCCGTCCCG 60.817 65.000 0.00 0.00 0.00 5.14
2526 2944 0.257039 TGTACTACTCCCTCCGTCCC 59.743 60.000 0.00 0.00 0.00 4.46
2527 2945 1.064832 ACTGTACTACTCCCTCCGTCC 60.065 57.143 0.00 0.00 0.00 4.79
2528 2946 2.015587 CACTGTACTACTCCCTCCGTC 58.984 57.143 0.00 0.00 0.00 4.79
2529 2947 1.954258 GCACTGTACTACTCCCTCCGT 60.954 57.143 0.00 0.00 0.00 4.69
2530 2948 0.739561 GCACTGTACTACTCCCTCCG 59.260 60.000 0.00 0.00 0.00 4.63
2531 2949 1.848652 TGCACTGTACTACTCCCTCC 58.151 55.000 0.00 0.00 0.00 4.30
2532 2950 5.793030 ATAATGCACTGTACTACTCCCTC 57.207 43.478 0.00 0.00 0.00 4.30
2533 2951 5.900123 AGAATAATGCACTGTACTACTCCCT 59.100 40.000 0.00 0.00 0.00 4.20
2534 2952 6.163135 AGAATAATGCACTGTACTACTCCC 57.837 41.667 0.00 0.00 0.00 4.30
2535 2953 9.250624 CTAAAGAATAATGCACTGTACTACTCC 57.749 37.037 0.00 0.00 0.00 3.85
2536 2954 9.804758 ACTAAAGAATAATGCACTGTACTACTC 57.195 33.333 0.00 0.00 0.00 2.59
2541 2959 8.601476 GTGGTACTAAAGAATAATGCACTGTAC 58.399 37.037 0.00 0.00 0.00 2.90
2559 2977 2.485426 CGACGTCCTTTCAGTGGTACTA 59.515 50.000 10.58 0.00 0.00 1.82
2560 2978 1.268899 CGACGTCCTTTCAGTGGTACT 59.731 52.381 10.58 0.00 0.00 2.73
2561 2979 1.267806 TCGACGTCCTTTCAGTGGTAC 59.732 52.381 10.58 0.00 0.00 3.34
2580 2998 6.369890 TGAACTGATTAGTGTTGAAGCTGATC 59.630 38.462 0.00 0.00 37.19 2.92
2584 3002 5.615289 ACTGAACTGATTAGTGTTGAAGCT 58.385 37.500 0.00 0.00 37.19 3.74
2594 3012 6.097554 ACATGGAGGAGTACTGAACTGATTAG 59.902 42.308 0.00 0.00 39.07 1.73
2603 3021 5.544176 AGAAAAGAACATGGAGGAGTACTGA 59.456 40.000 0.00 0.00 0.00 3.41
2611 3029 6.985117 TCAATCAAAGAAAAGAACATGGAGG 58.015 36.000 0.00 0.00 0.00 4.30
2612 3030 8.876275 TTTCAATCAAAGAAAAGAACATGGAG 57.124 30.769 0.00 0.00 32.47 3.86
2645 3063 3.909430 ACACACATGGACAAGTACGTAG 58.091 45.455 0.00 0.00 0.00 3.51
2646 3064 4.038282 AGAACACACATGGACAAGTACGTA 59.962 41.667 0.00 0.00 0.00 3.57
2648 3066 3.184379 CAGAACACACATGGACAAGTACG 59.816 47.826 0.00 0.00 0.00 3.67
2672 3090 4.363999 CCTCAGTTAGCCAGATAGAAACG 58.636 47.826 0.00 0.00 0.00 3.60
2688 3106 2.109517 CTGCCAGTGTCAGCCTCAGT 62.110 60.000 0.00 0.00 0.00 3.41
2693 3111 0.321671 TACTTCTGCCAGTGTCAGCC 59.678 55.000 0.00 0.00 0.00 4.85
2708 3126 0.477795 AAGGCCACCCTCCCTTACTT 60.478 55.000 5.01 0.00 41.90 2.24
2810 3228 4.996062 AATGAAATGAAAAAGCAAGGCG 57.004 36.364 0.00 0.00 0.00 5.52
2811 3229 5.239087 TGGAAATGAAATGAAAAAGCAAGGC 59.761 36.000 0.00 0.00 0.00 4.35
2813 3231 6.357198 CGTGGAAATGAAATGAAAAAGCAAG 58.643 36.000 0.00 0.00 0.00 4.01
2815 3233 4.749099 CCGTGGAAATGAAATGAAAAAGCA 59.251 37.500 0.00 0.00 0.00 3.91
2816 3234 4.377328 GCCGTGGAAATGAAATGAAAAAGC 60.377 41.667 0.00 0.00 0.00 3.51
2817 3235 4.749099 TGCCGTGGAAATGAAATGAAAAAG 59.251 37.500 0.00 0.00 0.00 2.27
2818 3236 4.509600 GTGCCGTGGAAATGAAATGAAAAA 59.490 37.500 0.00 0.00 0.00 1.94
2865 3284 4.006319 GCAATCAAAGCTCAACTCCTAGT 58.994 43.478 0.00 0.00 0.00 2.57
2866 3285 3.376546 GGCAATCAAAGCTCAACTCCTAG 59.623 47.826 0.00 0.00 0.00 3.02
2867 3286 3.244875 TGGCAATCAAAGCTCAACTCCTA 60.245 43.478 0.00 0.00 0.00 2.94
2873 3292 1.000385 CCGTTGGCAATCAAAGCTCAA 60.000 47.619 1.92 0.00 37.08 3.02


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.