Multiple sequence alignment - TraesCS5B01G311800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G311800 chr5B 100.000 2369 0 0 1 2369 493288844 493286476 0.000000e+00 4375.0
1 TraesCS5B01G311800 chr5B 91.257 183 16 0 2187 2369 493125430 493125248 1.410000e-62 250.0
2 TraesCS5B01G311800 chr5B 93.506 154 7 1 2216 2369 492820193 492820043 2.370000e-55 226.0
3 TraesCS5B01G311800 chr5B 80.919 283 38 7 1792 2063 364105706 364105983 2.390000e-50 209.0
4 TraesCS5B01G311800 chr5B 90.278 72 7 0 2298 2369 493631086 493631015 6.970000e-16 95.3
5 TraesCS5B01G311800 chr1B 90.616 1396 118 6 439 1833 619098065 619096682 0.000000e+00 1840.0
6 TraesCS5B01G311800 chr1B 89.946 1104 88 9 441 1543 541403316 541402235 0.000000e+00 1402.0
7 TraesCS5B01G311800 chr1B 92.231 399 30 1 1381 1779 346173242 346173639 4.420000e-157 564.0
8 TraesCS5B01G311800 chr1B 85.606 132 6 5 1942 2061 619096452 619096322 2.470000e-25 126.0
9 TraesCS5B01G311800 chr1B 100.000 37 0 0 1721 1757 541402177 541402141 4.220000e-08 69.4
10 TraesCS5B01G311800 chr2D 91.272 1077 62 11 990 2062 69242694 69243742 0.000000e+00 1439.0
11 TraesCS5B01G311800 chr2D 87.669 592 49 3 441 1008 69242021 69242612 0.000000e+00 667.0
12 TraesCS5B01G311800 chr2D 83.415 205 32 2 19 222 614870504 614870707 3.110000e-44 189.0
13 TraesCS5B01G311800 chr2D 84.337 166 25 1 440 605 620611107 620610943 6.780000e-36 161.0
14 TraesCS5B01G311800 chr7D 89.721 574 54 4 438 1008 266893927 266894498 0.000000e+00 728.0
15 TraesCS5B01G311800 chr7D 86.184 608 41 13 1464 2062 266894879 266895452 3.350000e-173 617.0
16 TraesCS5B01G311800 chr7D 93.064 346 24 0 990 1335 401716915 401716570 7.560000e-140 507.0
17 TraesCS5B01G311800 chr7D 92.691 301 21 1 990 1290 266894580 266894879 1.300000e-117 433.0
18 TraesCS5B01G311800 chr7D 84.211 285 35 7 1786 2061 104923312 104923595 3.880000e-68 268.0
19 TraesCS5B01G311800 chr7D 90.230 174 15 1 1789 1960 564687191 564687018 2.370000e-55 226.0
20 TraesCS5B01G311800 chr7D 83.256 215 30 5 19 231 583970943 583971153 2.400000e-45 193.0
21 TraesCS5B01G311800 chr7D 77.273 220 39 10 21 236 617759041 617758829 4.140000e-23 119.0
22 TraesCS5B01G311800 chr1D 92.481 399 29 1 1381 1779 267376272 267375875 9.500000e-159 569.0
23 TraesCS5B01G311800 chr1D 81.720 93 16 1 532 624 364035617 364035708 2.520000e-10 76.8
24 TraesCS5B01G311800 chr1A 92.231 399 30 1 1381 1779 335835618 335836015 4.420000e-157 564.0
25 TraesCS5B01G311800 chr5D 97.651 298 7 0 2072 2369 410874370 410874073 1.620000e-141 512.0
26 TraesCS5B01G311800 chr5D 92.350 183 14 0 2187 2369 410638272 410638090 6.490000e-66 261.0
27 TraesCS5B01G311800 chr5D 81.181 271 39 8 1807 2065 377279534 377279264 8.580000e-50 207.0
28 TraesCS5B01G311800 chr5D 90.278 72 7 0 2298 2369 411170955 411170884 6.970000e-16 95.3
29 TraesCS5B01G311800 chr5D 85.106 94 12 2 538 630 555445267 555445359 6.970000e-16 95.3
30 TraesCS5B01G311800 chr7B 93.064 346 24 0 990 1335 411342025 411341680 7.560000e-140 507.0
31 TraesCS5B01G311800 chr7A 93.064 346 24 0 990 1335 459461316 459460971 7.560000e-140 507.0
32 TraesCS5B01G311800 chr5A 95.638 298 13 0 2072 2369 522868975 522868678 1.650000e-131 479.0
33 TraesCS5B01G311800 chr5A 80.542 406 70 8 1381 1779 662348442 662348039 1.060000e-78 303.0
34 TraesCS5B01G311800 chr5A 91.257 183 16 0 2187 2369 522357688 522357506 1.410000e-62 250.0
35 TraesCS5B01G311800 chr5A 92.208 154 9 1 2216 2369 522124624 522124474 5.130000e-52 215.0
36 TraesCS5B01G311800 chr2A 86.851 289 24 8 1787 2064 628055110 628054825 6.360000e-81 311.0
37 TraesCS5B01G311800 chr3A 85.616 292 33 6 1786 2068 12434824 12435115 4.950000e-77 298.0
38 TraesCS5B01G311800 chr3A 97.826 46 1 0 1336 1381 647700067 647700022 1.950000e-11 80.5
39 TraesCS5B01G311800 chr3A 78.322 143 16 9 19 161 82450455 82450582 7.020000e-11 78.7
40 TraesCS5B01G311800 chr4D 80.098 407 70 9 1381 1779 481140933 481141336 2.300000e-75 292.0
41 TraesCS5B01G311800 chr6A 84.507 284 27 12 1792 2061 555420544 555420264 5.020000e-67 265.0
42 TraesCS5B01G311800 chr6A 85.581 215 23 6 19 230 111556760 111556969 3.960000e-53 219.0
43 TraesCS5B01G311800 chr6A 79.372 223 22 10 239 441 111556271 111556489 4.110000e-28 135.0
44 TraesCS5B01G311800 chr6A 79.279 222 25 7 239 441 111556759 111556978 4.110000e-28 135.0
45 TraesCS5B01G311800 chr4B 81.908 304 47 6 1381 1677 609490361 609490663 1.410000e-62 250.0
46 TraesCS5B01G311800 chr4B 80.488 205 35 5 437 639 636774534 636774333 4.080000e-33 152.0
47 TraesCS5B01G311800 chr6D 82.979 282 38 6 1789 2060 7294368 7294087 1.820000e-61 246.0
48 TraesCS5B01G311800 chr6D 81.281 203 32 5 439 639 315682072 315681874 2.440000e-35 159.0
49 TraesCS5B01G311800 chr2B 86.500 200 26 1 437 635 78082889 78083088 3.960000e-53 219.0
50 TraesCS5B01G311800 chr3D 95.833 72 3 0 907 978 511655585 511655514 1.490000e-22 117.0
51 TraesCS5B01G311800 chr3D 94.444 54 2 1 1336 1389 511655294 511655242 5.430000e-12 82.4
52 TraesCS5B01G311800 chr3B 94.444 72 4 0 907 978 673837075 673837004 6.920000e-21 111.0
53 TraesCS5B01G311800 chr3B 98.387 62 1 0 907 968 673849849 673849788 2.490000e-20 110.0
54 TraesCS5B01G311800 chr3B 94.444 54 3 0 1336 1389 673836784 673836731 1.510000e-12 84.2
55 TraesCS5B01G311800 chr3B 100.000 31 0 0 2048 2078 782475580 782475550 9.150000e-05 58.4


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G311800 chr5B 493286476 493288844 2368 True 4375.000000 4375 100.0000 1 2369 1 chr5B.!!$R3 2368
1 TraesCS5B01G311800 chr1B 619096322 619098065 1743 True 983.000000 1840 88.1110 439 2061 2 chr1B.!!$R2 1622
2 TraesCS5B01G311800 chr1B 541402141 541403316 1175 True 735.700000 1402 94.9730 441 1757 2 chr1B.!!$R1 1316
3 TraesCS5B01G311800 chr2D 69242021 69243742 1721 False 1053.000000 1439 89.4705 441 2062 2 chr2D.!!$F2 1621
4 TraesCS5B01G311800 chr7D 266893927 266895452 1525 False 592.666667 728 89.5320 438 2062 3 chr7D.!!$F3 1624

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
407 408 0.036388 GGCGGTCTCACAATCCTCAA 60.036 55.0 0.0 0.0 0.0 3.02 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2197 2525 0.027455 CGCAGCTAGAGTCGAGAGTG 59.973 60.0 4.21 1.98 0.0 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.587388 AAATCGTGGGAGTTAGATACGAA 57.413 39.130 0.00 0.00 45.30 3.85
23 24 5.786264 AATCGTGGGAGTTAGATACGAAT 57.214 39.130 0.00 0.00 45.30 3.34
24 25 5.786264 ATCGTGGGAGTTAGATACGAATT 57.214 39.130 0.00 0.00 45.30 2.17
25 26 5.587388 TCGTGGGAGTTAGATACGAATTT 57.413 39.130 0.00 0.00 40.33 1.82
26 27 6.698008 TCGTGGGAGTTAGATACGAATTTA 57.302 37.500 0.00 0.00 40.33 1.40
27 28 7.099266 TCGTGGGAGTTAGATACGAATTTAA 57.901 36.000 0.00 0.00 40.33 1.52
28 29 7.719483 TCGTGGGAGTTAGATACGAATTTAAT 58.281 34.615 0.00 0.00 40.33 1.40
29 30 8.849168 TCGTGGGAGTTAGATACGAATTTAATA 58.151 33.333 0.00 0.00 40.33 0.98
30 31 9.467258 CGTGGGAGTTAGATACGAATTTAATAA 57.533 33.333 0.00 0.00 36.94 1.40
62 63 7.800155 TGAATCTAAAACATGTGAACTGTGA 57.200 32.000 0.00 0.00 0.00 3.58
63 64 8.394971 TGAATCTAAAACATGTGAACTGTGAT 57.605 30.769 0.00 0.00 0.00 3.06
64 65 8.849168 TGAATCTAAAACATGTGAACTGTGATT 58.151 29.630 0.00 3.99 0.00 2.57
107 108 9.979578 ACATTCACAAATTTTAATAAGTGCTCA 57.020 25.926 0.00 0.00 0.00 4.26
122 123 6.655078 AAGTGCTCATGAAATAAAAGGTGT 57.345 33.333 0.00 0.00 0.00 4.16
123 124 7.759489 AAGTGCTCATGAAATAAAAGGTGTA 57.241 32.000 0.00 0.00 0.00 2.90
124 125 7.759489 AGTGCTCATGAAATAAAAGGTGTAA 57.241 32.000 0.00 0.00 0.00 2.41
125 126 8.177119 AGTGCTCATGAAATAAAAGGTGTAAA 57.823 30.769 0.00 0.00 0.00 2.01
126 127 8.637986 AGTGCTCATGAAATAAAAGGTGTAAAA 58.362 29.630 0.00 0.00 0.00 1.52
127 128 9.255304 GTGCTCATGAAATAAAAGGTGTAAAAA 57.745 29.630 0.00 0.00 0.00 1.94
151 152 9.974980 AAAAATAAAAACAAGAAGGAGCGATAA 57.025 25.926 0.00 0.00 0.00 1.75
152 153 9.974980 AAAATAAAAACAAGAAGGAGCGATAAA 57.025 25.926 0.00 0.00 0.00 1.40
153 154 9.974980 AAATAAAAACAAGAAGGAGCGATAAAA 57.025 25.926 0.00 0.00 0.00 1.52
154 155 8.965986 ATAAAAACAAGAAGGAGCGATAAAAC 57.034 30.769 0.00 0.00 0.00 2.43
155 156 6.635030 AAAACAAGAAGGAGCGATAAAACT 57.365 33.333 0.00 0.00 0.00 2.66
156 157 7.739498 AAAACAAGAAGGAGCGATAAAACTA 57.261 32.000 0.00 0.00 0.00 2.24
157 158 7.739498 AAACAAGAAGGAGCGATAAAACTAA 57.261 32.000 0.00 0.00 0.00 2.24
158 159 7.739498 AACAAGAAGGAGCGATAAAACTAAA 57.261 32.000 0.00 0.00 0.00 1.85
159 160 7.130303 ACAAGAAGGAGCGATAAAACTAAAC 57.870 36.000 0.00 0.00 0.00 2.01
160 161 6.708949 ACAAGAAGGAGCGATAAAACTAAACA 59.291 34.615 0.00 0.00 0.00 2.83
161 162 6.969828 AGAAGGAGCGATAAAACTAAACAG 57.030 37.500 0.00 0.00 0.00 3.16
162 163 5.875359 AGAAGGAGCGATAAAACTAAACAGG 59.125 40.000 0.00 0.00 0.00 4.00
163 164 5.416271 AGGAGCGATAAAACTAAACAGGA 57.584 39.130 0.00 0.00 0.00 3.86
164 165 5.990668 AGGAGCGATAAAACTAAACAGGAT 58.009 37.500 0.00 0.00 0.00 3.24
165 166 5.817816 AGGAGCGATAAAACTAAACAGGATG 59.182 40.000 0.00 0.00 46.00 3.51
166 167 5.485662 AGCGATAAAACTAAACAGGATGC 57.514 39.130 0.00 0.00 42.53 3.91
167 168 4.941263 AGCGATAAAACTAAACAGGATGCA 59.059 37.500 0.00 0.00 42.53 3.96
168 169 5.028375 GCGATAAAACTAAACAGGATGCAC 58.972 41.667 0.00 0.00 42.53 4.57
169 170 5.569413 CGATAAAACTAAACAGGATGCACC 58.431 41.667 0.00 0.00 42.53 5.01
181 182 2.919228 GGATGCACCTTACAAGTAGGG 58.081 52.381 6.82 6.82 38.18 3.53
182 183 2.289565 GATGCACCTTACAAGTAGGGC 58.710 52.381 8.16 0.00 35.90 5.19
183 184 0.326927 TGCACCTTACAAGTAGGGCC 59.673 55.000 8.16 0.00 35.90 5.80
184 185 0.393944 GCACCTTACAAGTAGGGCCC 60.394 60.000 16.46 16.46 35.90 5.80
185 186 1.286248 CACCTTACAAGTAGGGCCCT 58.714 55.000 31.35 31.35 35.90 5.19
186 187 1.209747 CACCTTACAAGTAGGGCCCTC 59.790 57.143 32.80 20.32 35.90 4.30
187 188 0.464452 CCTTACAAGTAGGGCCCTCG 59.536 60.000 32.80 18.21 0.00 4.63
188 189 0.179081 CTTACAAGTAGGGCCCTCGC 60.179 60.000 32.80 22.94 0.00 5.03
189 190 1.952102 TTACAAGTAGGGCCCTCGCG 61.952 60.000 32.80 18.20 35.02 5.87
190 191 4.530857 CAAGTAGGGCCCTCGCGG 62.531 72.222 32.80 13.71 35.02 6.46
204 205 4.329545 GCGGCCTCACAACCCTCA 62.330 66.667 0.00 0.00 0.00 3.86
205 206 2.429930 CGGCCTCACAACCCTCAA 59.570 61.111 0.00 0.00 0.00 3.02
206 207 1.228124 CGGCCTCACAACCCTCAAA 60.228 57.895 0.00 0.00 0.00 2.69
207 208 1.237285 CGGCCTCACAACCCTCAAAG 61.237 60.000 0.00 0.00 0.00 2.77
208 209 1.527433 GGCCTCACAACCCTCAAAGC 61.527 60.000 0.00 0.00 0.00 3.51
209 210 0.823356 GCCTCACAACCCTCAAAGCA 60.823 55.000 0.00 0.00 0.00 3.91
210 211 1.242076 CCTCACAACCCTCAAAGCAG 58.758 55.000 0.00 0.00 0.00 4.24
211 212 0.595095 CTCACAACCCTCAAAGCAGC 59.405 55.000 0.00 0.00 0.00 5.25
212 213 1.165907 TCACAACCCTCAAAGCAGCG 61.166 55.000 0.00 0.00 0.00 5.18
213 214 1.898574 ACAACCCTCAAAGCAGCGG 60.899 57.895 0.00 0.00 0.00 5.52
214 215 2.985847 AACCCTCAAAGCAGCGGC 60.986 61.111 0.00 0.00 41.61 6.53
215 216 3.790416 AACCCTCAAAGCAGCGGCA 62.790 57.895 12.44 0.00 44.61 5.69
216 217 2.753043 CCCTCAAAGCAGCGGCAT 60.753 61.111 12.44 0.00 44.61 4.40
217 218 2.488355 CCTCAAAGCAGCGGCATG 59.512 61.111 12.44 9.89 44.61 4.06
218 219 2.202570 CTCAAAGCAGCGGCATGC 60.203 61.111 9.90 9.90 46.88 4.06
228 229 3.654178 GCGGCATGCTTCAAATCAT 57.346 47.368 18.92 0.00 41.73 2.45
229 230 1.205657 GCGGCATGCTTCAAATCATG 58.794 50.000 18.92 2.90 42.08 3.07
230 231 1.847818 CGGCATGCTTCAAATCATGG 58.152 50.000 18.92 0.00 40.16 3.66
231 232 1.537348 CGGCATGCTTCAAATCATGGG 60.537 52.381 18.92 0.00 40.16 4.00
232 233 1.758280 GGCATGCTTCAAATCATGGGA 59.242 47.619 18.92 0.00 40.16 4.37
233 234 2.168936 GGCATGCTTCAAATCATGGGAA 59.831 45.455 18.92 0.00 40.16 3.97
234 235 3.192466 GCATGCTTCAAATCATGGGAAC 58.808 45.455 11.37 0.00 40.16 3.62
235 236 3.118884 GCATGCTTCAAATCATGGGAACT 60.119 43.478 11.37 0.00 40.16 3.01
236 237 4.430007 CATGCTTCAAATCATGGGAACTG 58.570 43.478 0.00 0.00 37.13 3.16
237 238 3.765381 TGCTTCAAATCATGGGAACTGA 58.235 40.909 0.00 0.00 0.00 3.41
238 239 3.507233 TGCTTCAAATCATGGGAACTGAC 59.493 43.478 0.00 0.00 0.00 3.51
239 240 3.507233 GCTTCAAATCATGGGAACTGACA 59.493 43.478 0.00 0.00 0.00 3.58
240 241 4.159135 GCTTCAAATCATGGGAACTGACAT 59.841 41.667 0.00 0.00 0.00 3.06
241 242 5.647589 CTTCAAATCATGGGAACTGACATG 58.352 41.667 0.00 0.00 44.40 3.21
252 253 9.740239 CATGGGAACTGACATGAATTTAATAAG 57.260 33.333 0.00 0.00 45.55 1.73
253 254 8.877864 TGGGAACTGACATGAATTTAATAAGT 57.122 30.769 0.00 0.00 0.00 2.24
254 255 9.967451 TGGGAACTGACATGAATTTAATAAGTA 57.033 29.630 0.00 0.00 0.00 2.24
328 329 9.643693 ATTCACAAATTTTAATAAGTGCTCAGG 57.356 29.630 0.00 0.00 0.00 3.86
329 330 8.402798 TCACAAATTTTAATAAGTGCTCAGGA 57.597 30.769 0.00 0.00 0.00 3.86
330 331 8.855110 TCACAAATTTTAATAAGTGCTCAGGAA 58.145 29.630 0.00 0.00 0.00 3.36
331 332 9.643693 CACAAATTTTAATAAGTGCTCAGGAAT 57.356 29.630 0.00 0.00 0.00 3.01
339 340 9.528489 TTAATAAGTGCTCAGGAATTAAAAGGT 57.472 29.630 0.00 0.00 0.00 3.50
340 341 5.712152 AAGTGCTCAGGAATTAAAAGGTG 57.288 39.130 0.00 0.00 0.00 4.00
341 342 4.729868 AGTGCTCAGGAATTAAAAGGTGT 58.270 39.130 0.00 0.00 0.00 4.16
342 343 5.876357 AGTGCTCAGGAATTAAAAGGTGTA 58.124 37.500 0.00 0.00 0.00 2.90
343 344 6.303839 AGTGCTCAGGAATTAAAAGGTGTAA 58.696 36.000 0.00 0.00 0.00 2.41
344 345 6.775629 AGTGCTCAGGAATTAAAAGGTGTAAA 59.224 34.615 0.00 0.00 0.00 2.01
345 346 7.286775 AGTGCTCAGGAATTAAAAGGTGTAAAA 59.713 33.333 0.00 0.00 0.00 1.52
346 347 7.923878 GTGCTCAGGAATTAAAAGGTGTAAAAA 59.076 33.333 0.00 0.00 0.00 1.94
347 348 8.646900 TGCTCAGGAATTAAAAGGTGTAAAAAT 58.353 29.630 0.00 0.00 0.00 1.82
363 364 9.710979 GGTGTAAAAATAAAAACAAAAAGGAGC 57.289 29.630 0.00 0.00 0.00 4.70
364 365 9.416058 GTGTAAAAATAAAAACAAAAAGGAGCG 57.584 29.630 0.00 0.00 0.00 5.03
365 366 9.367444 TGTAAAAATAAAAACAAAAAGGAGCGA 57.633 25.926 0.00 0.00 0.00 4.93
372 373 9.758651 ATAAAAACAAAAAGGAGCGATAAAACT 57.241 25.926 0.00 0.00 0.00 2.66
374 375 9.589111 AAAAACAAAAAGGAGCGATAAAACTAA 57.411 25.926 0.00 0.00 0.00 2.24
375 376 9.589111 AAAACAAAAAGGAGCGATAAAACTAAA 57.411 25.926 0.00 0.00 0.00 1.85
376 377 9.589111 AAACAAAAAGGAGCGATAAAACTAAAA 57.411 25.926 0.00 0.00 0.00 1.52
377 378 8.570096 ACAAAAAGGAGCGATAAAACTAAAAC 57.430 30.769 0.00 0.00 0.00 2.43
378 379 7.650504 ACAAAAAGGAGCGATAAAACTAAAACC 59.349 33.333 0.00 0.00 0.00 3.27
379 380 6.887626 AAAGGAGCGATAAAACTAAAACCA 57.112 33.333 0.00 0.00 0.00 3.67
380 381 6.496338 AAGGAGCGATAAAACTAAAACCAG 57.504 37.500 0.00 0.00 0.00 4.00
381 382 4.941873 AGGAGCGATAAAACTAAAACCAGG 59.058 41.667 0.00 0.00 0.00 4.45
382 383 4.095932 GGAGCGATAAAACTAAAACCAGGG 59.904 45.833 0.00 0.00 0.00 4.45
383 384 3.442625 AGCGATAAAACTAAAACCAGGGC 59.557 43.478 0.00 0.00 0.00 5.19
384 385 3.428452 GCGATAAAACTAAAACCAGGGCC 60.428 47.826 0.00 0.00 0.00 5.80
385 386 3.129813 CGATAAAACTAAAACCAGGGCCC 59.870 47.826 16.46 16.46 0.00 5.80
386 387 2.787339 AAAACTAAAACCAGGGCCCT 57.213 45.000 22.28 22.28 0.00 5.19
387 388 2.304221 AAACTAAAACCAGGGCCCTC 57.696 50.000 25.77 0.00 0.00 4.30
388 389 0.037734 AACTAAAACCAGGGCCCTCG 59.962 55.000 25.77 20.48 0.00 4.63
389 390 1.077716 CTAAAACCAGGGCCCTCGG 60.078 63.158 28.88 28.88 0.00 4.63
400 401 3.691342 CCCTCGGCGGTCTCACAA 61.691 66.667 7.21 0.00 0.00 3.33
401 402 2.579201 CCTCGGCGGTCTCACAAT 59.421 61.111 7.21 0.00 0.00 2.71
402 403 1.519455 CCTCGGCGGTCTCACAATC 60.519 63.158 7.21 0.00 0.00 2.67
403 404 1.519455 CTCGGCGGTCTCACAATCC 60.519 63.158 7.21 0.00 0.00 3.01
404 405 1.949847 CTCGGCGGTCTCACAATCCT 61.950 60.000 7.21 0.00 0.00 3.24
405 406 1.519455 CGGCGGTCTCACAATCCTC 60.519 63.158 0.00 0.00 0.00 3.71
406 407 1.596934 GGCGGTCTCACAATCCTCA 59.403 57.895 0.00 0.00 0.00 3.86
407 408 0.036388 GGCGGTCTCACAATCCTCAA 60.036 55.000 0.00 0.00 0.00 3.02
408 409 1.610624 GGCGGTCTCACAATCCTCAAA 60.611 52.381 0.00 0.00 0.00 2.69
409 410 1.734465 GCGGTCTCACAATCCTCAAAG 59.266 52.381 0.00 0.00 0.00 2.77
410 411 1.734465 CGGTCTCACAATCCTCAAAGC 59.266 52.381 0.00 0.00 0.00 3.51
411 412 2.783135 GGTCTCACAATCCTCAAAGCA 58.217 47.619 0.00 0.00 0.00 3.91
412 413 2.485814 GGTCTCACAATCCTCAAAGCAC 59.514 50.000 0.00 0.00 0.00 4.40
413 414 2.485814 GTCTCACAATCCTCAAAGCACC 59.514 50.000 0.00 0.00 0.00 5.01
414 415 1.466167 CTCACAATCCTCAAAGCACCG 59.534 52.381 0.00 0.00 0.00 4.94
415 416 0.523072 CACAATCCTCAAAGCACCGG 59.477 55.000 0.00 0.00 0.00 5.28
416 417 1.244019 ACAATCCTCAAAGCACCGGC 61.244 55.000 0.00 0.00 41.61 6.13
417 418 1.074775 AATCCTCAAAGCACCGGCA 59.925 52.632 0.00 0.00 44.61 5.69
418 419 1.244019 AATCCTCAAAGCACCGGCAC 61.244 55.000 0.00 0.00 44.61 5.01
432 433 3.334078 GGCACGCTTCAAATCATGG 57.666 52.632 0.00 0.00 0.00 3.66
433 434 0.179129 GGCACGCTTCAAATCATGGG 60.179 55.000 0.00 0.00 0.00 4.00
434 435 0.810648 GCACGCTTCAAATCATGGGA 59.189 50.000 0.00 0.00 0.00 4.37
435 436 1.202114 GCACGCTTCAAATCATGGGAA 59.798 47.619 0.00 0.00 0.00 3.97
436 437 2.867429 CACGCTTCAAATCATGGGAAC 58.133 47.619 0.00 0.00 0.00 3.62
437 438 2.489329 CACGCTTCAAATCATGGGAACT 59.511 45.455 0.00 0.00 0.00 3.01
467 468 2.437359 GGTTGCCTGCATCGAGCT 60.437 61.111 8.07 0.00 45.94 4.09
476 477 1.078848 GCATCGAGCTCAACCAGGT 60.079 57.895 15.40 0.00 41.15 4.00
529 530 3.671971 GCTGTTTGGTTGCACGCATATAA 60.672 43.478 0.00 0.00 0.00 0.98
534 535 5.819825 TTGGTTGCACGCATATAATGTTA 57.180 34.783 0.00 0.00 0.00 2.41
548 549 2.965671 ATGTTAGGCCTGCATAGCAT 57.034 45.000 17.99 6.10 38.13 3.79
550 551 1.490069 TGTTAGGCCTGCATAGCATGA 59.510 47.619 17.99 0.00 38.13 3.07
567 568 4.880696 AGCATGATTCTTAAAGCACCTCTC 59.119 41.667 0.00 0.00 32.77 3.20
573 574 0.690762 TTAAAGCACCTCTCGGCCTT 59.309 50.000 0.00 0.00 0.00 4.35
578 579 3.764466 ACCTCTCGGCCTTGCTCG 61.764 66.667 0.00 0.00 0.00 5.03
650 651 1.372748 CGATGGCTCGCTGGAGATC 60.373 63.158 0.00 0.00 43.27 2.75
698 699 0.612174 TCCTCTCTCTGGGTCAACCG 60.612 60.000 0.00 0.00 44.64 4.44
717 740 2.171840 CGACTCTTCCCTTTCTCCTCA 58.828 52.381 0.00 0.00 0.00 3.86
763 786 2.113986 GCCTGGCTCACCTTGTGT 59.886 61.111 12.43 0.00 36.63 3.72
928 952 4.020617 CTCACCTTGCTCCCGCCA 62.021 66.667 0.00 0.00 34.43 5.69
981 1005 2.997315 CCAGACTGCGGGGACTCA 60.997 66.667 0.00 0.00 0.00 3.41
1081 1207 2.668212 TCAAGTTCAAGGCGGCCG 60.668 61.111 24.05 24.05 0.00 6.13
1082 1208 2.978010 CAAGTTCAAGGCGGCCGT 60.978 61.111 28.70 7.70 0.00 5.68
1084 1210 3.767630 AAGTTCAAGGCGGCCGTGT 62.768 57.895 29.47 11.76 34.70 4.49
1173 1299 4.034258 GACCGGACGAGCACGACA 62.034 66.667 9.46 0.00 42.66 4.35
1182 1308 1.154093 GAGCACGACATTCGACGGA 60.154 57.895 1.94 0.00 43.74 4.69
1234 1360 3.368190 CTGCTGAGCTCGGACCAGG 62.368 68.421 27.04 6.51 0.00 4.45
1279 1405 0.310543 GCGGCTTGTGAACATGTTCA 59.689 50.000 32.36 32.36 46.27 3.18
1305 1431 4.362677 TGAACCAGGGCTACTTCTTCTAT 58.637 43.478 0.00 0.00 0.00 1.98
1830 1983 0.443869 GCGCACTCAACATGTTCGAT 59.556 50.000 17.71 0.70 0.00 3.59
1851 2004 3.765381 TGAAATGAGATGCCAAACCTGA 58.235 40.909 0.00 0.00 0.00 3.86
1878 2190 6.404954 GGGTGTTAAGCTTTGTTGTTAACTCA 60.405 38.462 3.20 3.74 37.48 3.41
1920 2232 5.517054 GCAATCAAACGCCGGATAAAAATTA 59.483 36.000 5.05 0.00 0.00 1.40
1939 2253 5.860941 ATTACATCTCGATGACAAGACCT 57.139 39.130 13.45 0.00 41.20 3.85
2031 2359 3.162666 TCGTTTTTCTCTCCTAGCCAGA 58.837 45.455 0.00 0.00 0.00 3.86
2062 2390 2.061509 AACTAACCAAACACGCCCTT 57.938 45.000 0.00 0.00 0.00 3.95
2063 2391 2.934886 ACTAACCAAACACGCCCTTA 57.065 45.000 0.00 0.00 0.00 2.69
2064 2392 2.774687 ACTAACCAAACACGCCCTTAG 58.225 47.619 0.00 0.00 0.00 2.18
2065 2393 2.105306 ACTAACCAAACACGCCCTTAGT 59.895 45.455 0.00 0.00 0.00 2.24
2066 2394 2.934886 AACCAAACACGCCCTTAGTA 57.065 45.000 0.00 0.00 0.00 1.82
2067 2395 3.428413 AACCAAACACGCCCTTAGTAT 57.572 42.857 0.00 0.00 0.00 2.12
2068 2396 2.981898 ACCAAACACGCCCTTAGTATC 58.018 47.619 0.00 0.00 0.00 2.24
2069 2397 2.570302 ACCAAACACGCCCTTAGTATCT 59.430 45.455 0.00 0.00 0.00 1.98
2070 2398 3.195661 CCAAACACGCCCTTAGTATCTC 58.804 50.000 0.00 0.00 0.00 2.75
2071 2399 3.118738 CCAAACACGCCCTTAGTATCTCT 60.119 47.826 0.00 0.00 0.00 3.10
2072 2400 4.098960 CCAAACACGCCCTTAGTATCTCTA 59.901 45.833 0.00 0.00 0.00 2.43
2073 2401 5.221461 CCAAACACGCCCTTAGTATCTCTAT 60.221 44.000 0.00 0.00 0.00 1.98
2074 2402 6.015688 CCAAACACGCCCTTAGTATCTCTATA 60.016 42.308 0.00 0.00 0.00 1.31
2075 2403 6.821031 AACACGCCCTTAGTATCTCTATAG 57.179 41.667 0.00 0.00 0.00 1.31
2076 2404 6.124316 ACACGCCCTTAGTATCTCTATAGA 57.876 41.667 1.69 1.69 35.80 1.98
2077 2405 6.723339 ACACGCCCTTAGTATCTCTATAGAT 58.277 40.000 2.11 0.00 44.80 1.98
2078 2406 7.859540 ACACGCCCTTAGTATCTCTATAGATA 58.140 38.462 2.11 0.00 42.61 1.98
2089 2417 6.912203 ATCTCTATAGATACGTGTCATCCG 57.088 41.667 15.08 0.75 40.82 4.18
2090 2418 4.630505 TCTCTATAGATACGTGTCATCCGC 59.369 45.833 15.08 0.00 0.00 5.54
2091 2419 3.688185 TCTATAGATACGTGTCATCCGCC 59.312 47.826 15.08 0.00 0.00 6.13
2092 2420 1.977056 TAGATACGTGTCATCCGCCT 58.023 50.000 15.08 0.00 0.00 5.52
2093 2421 1.112113 AGATACGTGTCATCCGCCTT 58.888 50.000 15.08 0.00 0.00 4.35
2094 2422 1.067212 AGATACGTGTCATCCGCCTTC 59.933 52.381 15.08 0.00 0.00 3.46
2095 2423 0.248907 ATACGTGTCATCCGCCTTCG 60.249 55.000 0.00 0.00 0.00 3.79
2096 2424 1.588824 TACGTGTCATCCGCCTTCGT 61.589 55.000 0.00 0.00 0.00 3.85
2097 2425 2.158959 CGTGTCATCCGCCTTCGTC 61.159 63.158 0.00 0.00 0.00 4.20
2098 2426 1.215647 GTGTCATCCGCCTTCGTCT 59.784 57.895 0.00 0.00 0.00 4.18
2099 2427 0.802607 GTGTCATCCGCCTTCGTCTC 60.803 60.000 0.00 0.00 0.00 3.36
2100 2428 1.248101 TGTCATCCGCCTTCGTCTCA 61.248 55.000 0.00 0.00 0.00 3.27
2101 2429 0.103208 GTCATCCGCCTTCGTCTCAT 59.897 55.000 0.00 0.00 0.00 2.90
2102 2430 0.824109 TCATCCGCCTTCGTCTCATT 59.176 50.000 0.00 0.00 0.00 2.57
2103 2431 1.202417 TCATCCGCCTTCGTCTCATTC 60.202 52.381 0.00 0.00 0.00 2.67
2104 2432 1.115467 ATCCGCCTTCGTCTCATTCT 58.885 50.000 0.00 0.00 0.00 2.40
2105 2433 0.456221 TCCGCCTTCGTCTCATTCTC 59.544 55.000 0.00 0.00 0.00 2.87
2106 2434 0.173481 CCGCCTTCGTCTCATTCTCA 59.827 55.000 0.00 0.00 0.00 3.27
2107 2435 1.202463 CCGCCTTCGTCTCATTCTCAT 60.202 52.381 0.00 0.00 0.00 2.90
2108 2436 2.123342 CGCCTTCGTCTCATTCTCATC 58.877 52.381 0.00 0.00 0.00 2.92
2109 2437 2.478831 GCCTTCGTCTCATTCTCATCC 58.521 52.381 0.00 0.00 0.00 3.51
2110 2438 2.159043 GCCTTCGTCTCATTCTCATCCA 60.159 50.000 0.00 0.00 0.00 3.41
2111 2439 3.494048 GCCTTCGTCTCATTCTCATCCAT 60.494 47.826 0.00 0.00 0.00 3.41
2112 2440 4.701765 CCTTCGTCTCATTCTCATCCATT 58.298 43.478 0.00 0.00 0.00 3.16
2113 2441 4.749099 CCTTCGTCTCATTCTCATCCATTC 59.251 45.833 0.00 0.00 0.00 2.67
2114 2442 4.327982 TCGTCTCATTCTCATCCATTCC 57.672 45.455 0.00 0.00 0.00 3.01
2115 2443 3.055591 CGTCTCATTCTCATCCATTCCG 58.944 50.000 0.00 0.00 0.00 4.30
2116 2444 3.243535 CGTCTCATTCTCATCCATTCCGA 60.244 47.826 0.00 0.00 0.00 4.55
2117 2445 4.305769 GTCTCATTCTCATCCATTCCGAG 58.694 47.826 0.00 0.00 0.00 4.63
2118 2446 3.065655 CTCATTCTCATCCATTCCGAGC 58.934 50.000 0.00 0.00 0.00 5.03
2119 2447 2.702478 TCATTCTCATCCATTCCGAGCT 59.298 45.455 0.00 0.00 0.00 4.09
2120 2448 2.898729 TTCTCATCCATTCCGAGCTC 57.101 50.000 2.73 2.73 0.00 4.09
2121 2449 1.043816 TCTCATCCATTCCGAGCTCC 58.956 55.000 8.47 0.00 0.00 4.70
2122 2450 0.755079 CTCATCCATTCCGAGCTCCA 59.245 55.000 8.47 0.00 0.00 3.86
2123 2451 0.755079 TCATCCATTCCGAGCTCCAG 59.245 55.000 8.47 0.00 0.00 3.86
2124 2452 0.883814 CATCCATTCCGAGCTCCAGC 60.884 60.000 8.47 0.00 42.49 4.85
2151 2479 2.733517 GCTCACTAGCTCGGAACATAC 58.266 52.381 0.00 0.00 45.85 2.39
2152 2480 2.359531 GCTCACTAGCTCGGAACATACT 59.640 50.000 0.00 0.00 45.85 2.12
2153 2481 3.564644 GCTCACTAGCTCGGAACATACTA 59.435 47.826 0.00 0.00 45.85 1.82
2154 2482 4.555116 GCTCACTAGCTCGGAACATACTAC 60.555 50.000 0.00 0.00 45.85 2.73
2155 2483 4.778579 TCACTAGCTCGGAACATACTACT 58.221 43.478 0.00 0.00 0.00 2.57
2156 2484 4.575236 TCACTAGCTCGGAACATACTACTG 59.425 45.833 0.00 0.00 0.00 2.74
2157 2485 2.873133 AGCTCGGAACATACTACTGC 57.127 50.000 0.00 0.00 0.00 4.40
2158 2486 1.409427 AGCTCGGAACATACTACTGCC 59.591 52.381 0.00 0.00 0.00 4.85
2159 2487 1.409427 GCTCGGAACATACTACTGCCT 59.591 52.381 0.00 0.00 0.00 4.75
2160 2488 2.544069 GCTCGGAACATACTACTGCCTC 60.544 54.545 0.00 0.00 0.00 4.70
2161 2489 1.674441 TCGGAACATACTACTGCCTCG 59.326 52.381 0.00 0.00 0.00 4.63
2162 2490 1.854227 GGAACATACTACTGCCTCGC 58.146 55.000 0.00 0.00 0.00 5.03
2163 2491 1.409427 GGAACATACTACTGCCTCGCT 59.591 52.381 0.00 0.00 0.00 4.93
2164 2492 2.621998 GGAACATACTACTGCCTCGCTA 59.378 50.000 0.00 0.00 0.00 4.26
2165 2493 3.550436 GGAACATACTACTGCCTCGCTAC 60.550 52.174 0.00 0.00 0.00 3.58
2166 2494 2.651455 ACATACTACTGCCTCGCTACA 58.349 47.619 0.00 0.00 0.00 2.74
2167 2495 2.358267 ACATACTACTGCCTCGCTACAC 59.642 50.000 0.00 0.00 0.00 2.90
2168 2496 1.012086 TACTACTGCCTCGCTACACG 58.988 55.000 0.00 0.00 45.62 4.49
2169 2497 1.586564 CTACTGCCTCGCTACACGC 60.587 63.158 0.00 0.00 43.23 5.34
2170 2498 2.938539 CTACTGCCTCGCTACACGCC 62.939 65.000 0.00 0.00 43.23 5.68
2171 2499 4.135153 CTGCCTCGCTACACGCCT 62.135 66.667 0.00 0.00 43.23 5.52
2172 2500 2.752640 TGCCTCGCTACACGCCTA 60.753 61.111 0.00 0.00 43.23 3.93
2173 2501 2.278661 GCCTCGCTACACGCCTAC 60.279 66.667 0.00 0.00 43.23 3.18
2174 2502 3.060020 GCCTCGCTACACGCCTACA 62.060 63.158 0.00 0.00 43.23 2.74
2175 2503 1.226603 CCTCGCTACACGCCTACAC 60.227 63.158 0.00 0.00 43.23 2.90
2176 2504 1.582937 CTCGCTACACGCCTACACG 60.583 63.158 0.00 0.00 43.23 4.49
2177 2505 2.578713 CGCTACACGCCTACACGG 60.579 66.667 0.00 0.00 37.37 4.94
2186 2514 2.358615 CCTACACGGCTGCAGCAA 60.359 61.111 37.63 17.15 44.36 3.91
2187 2515 2.680913 CCTACACGGCTGCAGCAAC 61.681 63.158 37.63 21.66 44.36 4.17
2188 2516 1.960763 CTACACGGCTGCAGCAACA 60.961 57.895 37.63 17.52 44.36 3.33
2189 2517 2.175184 CTACACGGCTGCAGCAACAC 62.175 60.000 37.63 20.56 44.36 3.32
2190 2518 4.332637 CACGGCTGCAGCAACACC 62.333 66.667 37.63 20.18 44.36 4.16
2191 2519 4.873810 ACGGCTGCAGCAACACCA 62.874 61.111 37.63 0.00 44.36 4.17
2192 2520 4.332637 CGGCTGCAGCAACACCAC 62.333 66.667 37.63 18.73 44.36 4.16
2193 2521 3.218470 GGCTGCAGCAACACCACA 61.218 61.111 37.63 0.00 44.36 4.17
2194 2522 2.784356 GGCTGCAGCAACACCACAA 61.784 57.895 37.63 0.00 44.36 3.33
2195 2523 1.589727 GCTGCAGCAACACCACAAC 60.590 57.895 33.36 0.00 41.59 3.32
2196 2524 1.066257 CTGCAGCAACACCACAACC 59.934 57.895 0.00 0.00 0.00 3.77
2197 2525 2.354074 CTGCAGCAACACCACAACCC 62.354 60.000 0.00 0.00 0.00 4.11
2198 2526 2.422231 GCAGCAACACCACAACCCA 61.422 57.895 0.00 0.00 0.00 4.51
2199 2527 1.437160 CAGCAACACCACAACCCAC 59.563 57.895 0.00 0.00 0.00 4.61
2200 2528 1.037030 CAGCAACACCACAACCCACT 61.037 55.000 0.00 0.00 0.00 4.00
2201 2529 0.751643 AGCAACACCACAACCCACTC 60.752 55.000 0.00 0.00 0.00 3.51
2202 2530 0.751643 GCAACACCACAACCCACTCT 60.752 55.000 0.00 0.00 0.00 3.24
2203 2531 1.308998 CAACACCACAACCCACTCTC 58.691 55.000 0.00 0.00 0.00 3.20
2204 2532 0.179056 AACACCACAACCCACTCTCG 60.179 55.000 0.00 0.00 0.00 4.04
2205 2533 1.046472 ACACCACAACCCACTCTCGA 61.046 55.000 0.00 0.00 0.00 4.04
2206 2534 0.600255 CACCACAACCCACTCTCGAC 60.600 60.000 0.00 0.00 0.00 4.20
2207 2535 0.759436 ACCACAACCCACTCTCGACT 60.759 55.000 0.00 0.00 0.00 4.18
2208 2536 0.038159 CCACAACCCACTCTCGACTC 60.038 60.000 0.00 0.00 0.00 3.36
2209 2537 0.962489 CACAACCCACTCTCGACTCT 59.038 55.000 0.00 0.00 0.00 3.24
2210 2538 2.160205 CACAACCCACTCTCGACTCTA 58.840 52.381 0.00 0.00 0.00 2.43
2211 2539 2.162608 CACAACCCACTCTCGACTCTAG 59.837 54.545 0.00 0.00 0.00 2.43
2212 2540 1.133407 CAACCCACTCTCGACTCTAGC 59.867 57.143 0.00 0.00 0.00 3.42
2213 2541 0.621609 ACCCACTCTCGACTCTAGCT 59.378 55.000 0.00 0.00 0.00 3.32
2214 2542 1.021202 CCCACTCTCGACTCTAGCTG 58.979 60.000 0.00 0.00 0.00 4.24
2215 2543 0.380378 CCACTCTCGACTCTAGCTGC 59.620 60.000 0.00 0.00 0.00 5.25
2216 2544 0.027455 CACTCTCGACTCTAGCTGCG 59.973 60.000 0.00 0.00 0.00 5.18
2217 2545 0.108089 ACTCTCGACTCTAGCTGCGA 60.108 55.000 0.00 0.00 0.00 5.10
2219 2547 2.389386 CTCGACTCTAGCTGCGAGT 58.611 57.895 17.27 17.27 43.65 4.18
2220 2548 0.027455 CTCGACTCTAGCTGCGAGTG 59.973 60.000 20.87 11.72 43.65 3.51
2221 2549 0.391263 TCGACTCTAGCTGCGAGTGA 60.391 55.000 20.87 15.75 41.53 3.41
2222 2550 0.660488 CGACTCTAGCTGCGAGTGAT 59.340 55.000 20.87 1.72 41.53 3.06
2223 2551 1.596709 CGACTCTAGCTGCGAGTGATG 60.597 57.143 20.87 9.81 41.53 3.07
2224 2552 0.743688 ACTCTAGCTGCGAGTGATGG 59.256 55.000 16.74 4.19 40.07 3.51
2225 2553 1.028130 CTCTAGCTGCGAGTGATGGA 58.972 55.000 9.59 0.00 0.00 3.41
2226 2554 0.741326 TCTAGCTGCGAGTGATGGAC 59.259 55.000 9.59 0.00 0.00 4.02
2227 2555 0.457443 CTAGCTGCGAGTGATGGACA 59.543 55.000 0.00 0.00 0.00 4.02
2235 2563 3.263941 GTGATGGACACCGTTGCC 58.736 61.111 0.00 0.00 43.05 4.52
2236 2564 2.358125 TGATGGACACCGTTGCCG 60.358 61.111 0.00 0.00 0.00 5.69
2237 2565 3.799755 GATGGACACCGTTGCCGC 61.800 66.667 0.00 0.00 0.00 6.53
2253 2581 3.741476 GCCTGGCCGCAGTTTGAG 61.741 66.667 7.66 0.00 0.00 3.02
2254 2582 3.058160 CCTGGCCGCAGTTTGAGG 61.058 66.667 0.00 0.00 40.53 3.86
2255 2583 3.058160 CTGGCCGCAGTTTGAGGG 61.058 66.667 0.00 0.00 37.82 4.30
2256 2584 4.659172 TGGCCGCAGTTTGAGGGG 62.659 66.667 0.00 0.00 37.82 4.79
2259 2587 2.597217 CCGCAGTTTGAGGGGCAA 60.597 61.111 0.00 0.00 33.40 4.52
2260 2588 2.629656 CCGCAGTTTGAGGGGCAAG 61.630 63.158 0.00 0.00 37.87 4.01
2261 2589 1.600636 CGCAGTTTGAGGGGCAAGA 60.601 57.895 0.00 0.00 37.87 3.02
2262 2590 1.580845 CGCAGTTTGAGGGGCAAGAG 61.581 60.000 0.00 0.00 37.87 2.85
2263 2591 0.538287 GCAGTTTGAGGGGCAAGAGT 60.538 55.000 0.00 0.00 37.87 3.24
2264 2592 1.271379 GCAGTTTGAGGGGCAAGAGTA 60.271 52.381 0.00 0.00 37.87 2.59
2265 2593 2.427506 CAGTTTGAGGGGCAAGAGTAC 58.572 52.381 0.00 0.00 37.87 2.73
2266 2594 2.054799 AGTTTGAGGGGCAAGAGTACA 58.945 47.619 0.00 0.00 37.87 2.90
2267 2595 2.644798 AGTTTGAGGGGCAAGAGTACAT 59.355 45.455 0.00 0.00 37.87 2.29
2268 2596 2.749621 GTTTGAGGGGCAAGAGTACATG 59.250 50.000 0.00 0.00 37.87 3.21
2269 2597 1.951209 TGAGGGGCAAGAGTACATGA 58.049 50.000 0.00 0.00 0.00 3.07
2270 2598 1.555075 TGAGGGGCAAGAGTACATGAC 59.445 52.381 0.00 0.00 0.00 3.06
2271 2599 0.537188 AGGGGCAAGAGTACATGACG 59.463 55.000 0.00 0.00 0.00 4.35
2272 2600 0.462047 GGGGCAAGAGTACATGACGG 60.462 60.000 0.00 0.00 0.00 4.79
2273 2601 0.249398 GGGCAAGAGTACATGACGGT 59.751 55.000 0.00 0.00 0.00 4.83
2274 2602 1.359848 GGCAAGAGTACATGACGGTG 58.640 55.000 0.00 0.00 0.00 4.94
2275 2603 1.337823 GGCAAGAGTACATGACGGTGT 60.338 52.381 0.00 0.00 36.13 4.16
2276 2604 1.726791 GCAAGAGTACATGACGGTGTG 59.273 52.381 0.00 0.00 33.62 3.82
2277 2605 2.337583 CAAGAGTACATGACGGTGTGG 58.662 52.381 0.00 0.00 33.62 4.17
2278 2606 0.246635 AGAGTACATGACGGTGTGGC 59.753 55.000 0.00 0.00 33.62 5.01
2279 2607 0.739813 GAGTACATGACGGTGTGGCC 60.740 60.000 0.00 0.00 33.62 5.36
2296 2624 3.527641 CGGAGGAGCAGGAGTACC 58.472 66.667 0.00 0.00 0.00 3.34
2297 2625 2.482333 CGGAGGAGCAGGAGTACCG 61.482 68.421 0.00 0.00 41.83 4.02
2298 2626 2.128507 GGAGGAGCAGGAGTACCGG 61.129 68.421 0.00 0.00 41.83 5.28
2299 2627 1.076923 GAGGAGCAGGAGTACCGGA 60.077 63.158 9.46 0.00 41.83 5.14
2300 2628 1.380112 AGGAGCAGGAGTACCGGAC 60.380 63.158 9.46 1.42 41.83 4.79
2301 2629 2.772691 GGAGCAGGAGTACCGGACG 61.773 68.421 9.46 0.00 41.83 4.79
2302 2630 2.754658 AGCAGGAGTACCGGACGG 60.755 66.667 9.46 9.56 41.83 4.79
2313 2641 4.415332 CGGACGGTGTGGTCGGAG 62.415 72.222 0.00 0.00 38.97 4.63
2314 2642 4.736896 GGACGGTGTGGTCGGAGC 62.737 72.222 0.00 0.00 37.82 4.70
2315 2643 4.736896 GACGGTGTGGTCGGAGCC 62.737 72.222 4.54 0.00 0.00 4.70
2349 2677 3.207669 GGGCGGATCAAGCTGCAG 61.208 66.667 10.11 10.11 41.95 4.41
2350 2678 3.207669 GGCGGATCAAGCTGCAGG 61.208 66.667 17.12 0.00 41.95 4.85
2351 2679 2.124983 GCGGATCAAGCTGCAGGA 60.125 61.111 17.12 4.56 39.93 3.86
2352 2680 2.178890 GCGGATCAAGCTGCAGGAG 61.179 63.158 17.12 0.00 39.93 3.69
2353 2681 1.519246 CGGATCAAGCTGCAGGAGA 59.481 57.895 17.12 0.00 0.00 3.71
2354 2682 0.809241 CGGATCAAGCTGCAGGAGAC 60.809 60.000 17.12 0.00 0.00 3.36
2355 2683 0.809241 GGATCAAGCTGCAGGAGACG 60.809 60.000 17.12 0.00 0.00 4.18
2356 2684 1.427592 GATCAAGCTGCAGGAGACGC 61.428 60.000 17.12 0.00 0.00 5.19
2357 2685 3.485431 CAAGCTGCAGGAGACGCG 61.485 66.667 17.12 3.53 33.51 6.01
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 5.587388 TTCGTATCTAACTCCCACGATTT 57.413 39.130 0.00 0.00 40.85 2.17
1 2 5.786264 ATTCGTATCTAACTCCCACGATT 57.214 39.130 0.00 0.00 40.85 3.34
4 5 7.941795 ATTAAATTCGTATCTAACTCCCACG 57.058 36.000 0.00 0.00 0.00 4.94
36 37 8.849168 TCACAGTTCACATGTTTTAGATTCATT 58.151 29.630 0.00 0.00 0.00 2.57
37 38 8.394971 TCACAGTTCACATGTTTTAGATTCAT 57.605 30.769 0.00 0.00 0.00 2.57
38 39 7.800155 TCACAGTTCACATGTTTTAGATTCA 57.200 32.000 0.00 0.00 0.00 2.57
81 82 9.979578 TGAGCACTTATTAAAATTTGTGAATGT 57.020 25.926 7.94 0.00 0.00 2.71
96 97 8.806146 ACACCTTTTATTTCATGAGCACTTATT 58.194 29.630 0.00 0.00 0.00 1.40
97 98 8.353423 ACACCTTTTATTTCATGAGCACTTAT 57.647 30.769 0.00 0.00 0.00 1.73
98 99 7.759489 ACACCTTTTATTTCATGAGCACTTA 57.241 32.000 0.00 0.00 0.00 2.24
99 100 6.655078 ACACCTTTTATTTCATGAGCACTT 57.345 33.333 0.00 0.00 0.00 3.16
100 101 7.759489 TTACACCTTTTATTTCATGAGCACT 57.241 32.000 0.00 0.00 0.00 4.40
101 102 8.810652 TTTTACACCTTTTATTTCATGAGCAC 57.189 30.769 0.00 0.00 0.00 4.40
125 126 9.974980 TTATCGCTCCTTCTTGTTTTTATTTTT 57.025 25.926 0.00 0.00 0.00 1.94
126 127 9.974980 TTTATCGCTCCTTCTTGTTTTTATTTT 57.025 25.926 0.00 0.00 0.00 1.82
127 128 9.974980 TTTTATCGCTCCTTCTTGTTTTTATTT 57.025 25.926 0.00 0.00 0.00 1.40
128 129 9.406828 GTTTTATCGCTCCTTCTTGTTTTTATT 57.593 29.630 0.00 0.00 0.00 1.40
129 130 8.793592 AGTTTTATCGCTCCTTCTTGTTTTTAT 58.206 29.630 0.00 0.00 0.00 1.40
130 131 8.161699 AGTTTTATCGCTCCTTCTTGTTTTTA 57.838 30.769 0.00 0.00 0.00 1.52
131 132 7.039313 AGTTTTATCGCTCCTTCTTGTTTTT 57.961 32.000 0.00 0.00 0.00 1.94
132 133 6.635030 AGTTTTATCGCTCCTTCTTGTTTT 57.365 33.333 0.00 0.00 0.00 2.43
133 134 7.739498 TTAGTTTTATCGCTCCTTCTTGTTT 57.261 32.000 0.00 0.00 0.00 2.83
134 135 7.227910 TGTTTAGTTTTATCGCTCCTTCTTGTT 59.772 33.333 0.00 0.00 0.00 2.83
135 136 6.708949 TGTTTAGTTTTATCGCTCCTTCTTGT 59.291 34.615 0.00 0.00 0.00 3.16
136 137 7.129109 TGTTTAGTTTTATCGCTCCTTCTTG 57.871 36.000 0.00 0.00 0.00 3.02
137 138 6.371825 CCTGTTTAGTTTTATCGCTCCTTCTT 59.628 38.462 0.00 0.00 0.00 2.52
138 139 5.875359 CCTGTTTAGTTTTATCGCTCCTTCT 59.125 40.000 0.00 0.00 0.00 2.85
139 140 5.873164 TCCTGTTTAGTTTTATCGCTCCTTC 59.127 40.000 0.00 0.00 0.00 3.46
140 141 5.801380 TCCTGTTTAGTTTTATCGCTCCTT 58.199 37.500 0.00 0.00 0.00 3.36
141 142 5.416271 TCCTGTTTAGTTTTATCGCTCCT 57.584 39.130 0.00 0.00 0.00 3.69
142 143 5.504173 GCATCCTGTTTAGTTTTATCGCTCC 60.504 44.000 0.00 0.00 0.00 4.70
143 144 5.064707 TGCATCCTGTTTAGTTTTATCGCTC 59.935 40.000 0.00 0.00 0.00 5.03
144 145 4.941263 TGCATCCTGTTTAGTTTTATCGCT 59.059 37.500 0.00 0.00 0.00 4.93
145 146 5.028375 GTGCATCCTGTTTAGTTTTATCGC 58.972 41.667 0.00 0.00 0.00 4.58
146 147 5.354234 AGGTGCATCCTGTTTAGTTTTATCG 59.646 40.000 7.00 0.00 46.19 2.92
147 148 6.759497 AGGTGCATCCTGTTTAGTTTTATC 57.241 37.500 7.00 0.00 46.19 1.75
161 162 2.919228 CCCTACTTGTAAGGTGCATCC 58.081 52.381 0.00 0.00 31.70 3.51
162 163 2.289565 GCCCTACTTGTAAGGTGCATC 58.710 52.381 0.00 0.00 33.21 3.91
163 164 1.064685 GGCCCTACTTGTAAGGTGCAT 60.065 52.381 0.00 0.00 34.09 3.96
164 165 0.326927 GGCCCTACTTGTAAGGTGCA 59.673 55.000 0.00 0.00 34.09 4.57
165 166 0.393944 GGGCCCTACTTGTAAGGTGC 60.394 60.000 17.04 0.00 31.70 5.01
166 167 1.209747 GAGGGCCCTACTTGTAAGGTG 59.790 57.143 28.78 0.00 31.70 4.00
167 168 1.581223 GAGGGCCCTACTTGTAAGGT 58.419 55.000 28.78 0.00 31.70 3.50
168 169 0.464452 CGAGGGCCCTACTTGTAAGG 59.536 60.000 28.78 1.43 0.00 2.69
169 170 0.179081 GCGAGGGCCCTACTTGTAAG 60.179 60.000 28.78 9.80 0.00 2.34
170 171 1.902556 GCGAGGGCCCTACTTGTAA 59.097 57.895 28.78 0.00 0.00 2.41
171 172 2.420568 CGCGAGGGCCCTACTTGTA 61.421 63.158 28.78 0.00 35.02 2.41
172 173 3.771160 CGCGAGGGCCCTACTTGT 61.771 66.667 28.78 0.00 35.02 3.16
187 188 3.842925 TTGAGGGTTGTGAGGCCGC 62.843 63.158 0.00 0.00 0.00 6.53
188 189 1.228124 TTTGAGGGTTGTGAGGCCG 60.228 57.895 0.00 0.00 0.00 6.13
189 190 1.527433 GCTTTGAGGGTTGTGAGGCC 61.527 60.000 0.00 0.00 0.00 5.19
190 191 0.823356 TGCTTTGAGGGTTGTGAGGC 60.823 55.000 0.00 0.00 0.00 4.70
191 192 1.242076 CTGCTTTGAGGGTTGTGAGG 58.758 55.000 0.00 0.00 0.00 3.86
192 193 0.595095 GCTGCTTTGAGGGTTGTGAG 59.405 55.000 0.00 0.00 0.00 3.51
193 194 1.165907 CGCTGCTTTGAGGGTTGTGA 61.166 55.000 0.00 0.00 0.00 3.58
194 195 1.283793 CGCTGCTTTGAGGGTTGTG 59.716 57.895 0.00 0.00 0.00 3.33
195 196 1.898574 CCGCTGCTTTGAGGGTTGT 60.899 57.895 0.00 0.00 0.00 3.32
196 197 2.956987 CCGCTGCTTTGAGGGTTG 59.043 61.111 0.00 0.00 0.00 3.77
197 198 2.985847 GCCGCTGCTTTGAGGGTT 60.986 61.111 0.00 0.00 33.53 4.11
198 199 3.574074 ATGCCGCTGCTTTGAGGGT 62.574 57.895 0.70 0.00 38.71 4.34
199 200 2.753043 ATGCCGCTGCTTTGAGGG 60.753 61.111 0.70 0.00 38.71 4.30
200 201 2.488355 CATGCCGCTGCTTTGAGG 59.512 61.111 0.70 0.00 38.71 3.86
201 202 2.202570 GCATGCCGCTGCTTTGAG 60.203 61.111 6.36 0.00 39.12 3.02
210 211 1.205657 CATGATTTGAAGCATGCCGC 58.794 50.000 15.66 7.31 44.52 6.53
215 216 4.159135 GTCAGTTCCCATGATTTGAAGCAT 59.841 41.667 0.00 0.00 34.98 3.79
216 217 3.507233 GTCAGTTCCCATGATTTGAAGCA 59.493 43.478 0.00 0.00 0.00 3.91
217 218 3.507233 TGTCAGTTCCCATGATTTGAAGC 59.493 43.478 0.00 0.00 0.00 3.86
218 219 5.416639 TCATGTCAGTTCCCATGATTTGAAG 59.583 40.000 0.00 0.00 41.77 3.02
219 220 5.323581 TCATGTCAGTTCCCATGATTTGAA 58.676 37.500 0.00 0.00 41.77 2.69
220 221 4.920999 TCATGTCAGTTCCCATGATTTGA 58.079 39.130 0.00 0.00 41.77 2.69
221 222 5.648178 TTCATGTCAGTTCCCATGATTTG 57.352 39.130 0.00 0.00 44.93 2.32
222 223 6.862469 AATTCATGTCAGTTCCCATGATTT 57.138 33.333 0.00 4.16 44.93 2.17
223 224 6.862469 AAATTCATGTCAGTTCCCATGATT 57.138 33.333 0.00 0.00 44.93 2.57
224 225 7.959658 TTAAATTCATGTCAGTTCCCATGAT 57.040 32.000 0.00 0.00 44.93 2.45
225 226 7.959658 ATTAAATTCATGTCAGTTCCCATGA 57.040 32.000 0.00 0.00 44.17 3.07
226 227 9.740239 CTTATTAAATTCATGTCAGTTCCCATG 57.260 33.333 0.00 0.00 39.82 3.66
227 228 9.479549 ACTTATTAAATTCATGTCAGTTCCCAT 57.520 29.630 0.00 0.00 0.00 4.00
228 229 8.877864 ACTTATTAAATTCATGTCAGTTCCCA 57.122 30.769 0.00 0.00 0.00 4.37
302 303 9.643693 CCTGAGCACTTATTAAAATTTGTGAAT 57.356 29.630 7.94 4.10 0.00 2.57
303 304 8.855110 TCCTGAGCACTTATTAAAATTTGTGAA 58.145 29.630 7.94 0.00 0.00 3.18
304 305 8.402798 TCCTGAGCACTTATTAAAATTTGTGA 57.597 30.769 7.94 0.00 0.00 3.58
305 306 9.643693 ATTCCTGAGCACTTATTAAAATTTGTG 57.356 29.630 0.00 0.00 0.00 3.33
313 314 9.528489 ACCTTTTAATTCCTGAGCACTTATTAA 57.472 29.630 0.00 0.00 0.00 1.40
314 315 8.956426 CACCTTTTAATTCCTGAGCACTTATTA 58.044 33.333 0.00 0.00 0.00 0.98
315 316 7.451566 ACACCTTTTAATTCCTGAGCACTTATT 59.548 33.333 0.00 0.00 0.00 1.40
316 317 6.948309 ACACCTTTTAATTCCTGAGCACTTAT 59.052 34.615 0.00 0.00 0.00 1.73
317 318 6.303839 ACACCTTTTAATTCCTGAGCACTTA 58.696 36.000 0.00 0.00 0.00 2.24
318 319 5.140454 ACACCTTTTAATTCCTGAGCACTT 58.860 37.500 0.00 0.00 0.00 3.16
319 320 4.729868 ACACCTTTTAATTCCTGAGCACT 58.270 39.130 0.00 0.00 0.00 4.40
320 321 6.569179 TTACACCTTTTAATTCCTGAGCAC 57.431 37.500 0.00 0.00 0.00 4.40
321 322 7.589958 TTTTACACCTTTTAATTCCTGAGCA 57.410 32.000 0.00 0.00 0.00 4.26
337 338 9.710979 GCTCCTTTTTGTTTTTATTTTTACACC 57.289 29.630 0.00 0.00 0.00 4.16
338 339 9.416058 CGCTCCTTTTTGTTTTTATTTTTACAC 57.584 29.630 0.00 0.00 0.00 2.90
339 340 9.367444 TCGCTCCTTTTTGTTTTTATTTTTACA 57.633 25.926 0.00 0.00 0.00 2.41
346 347 9.758651 AGTTTTATCGCTCCTTTTTGTTTTTAT 57.241 25.926 0.00 0.00 0.00 1.40
348 349 9.589111 TTAGTTTTATCGCTCCTTTTTGTTTTT 57.411 25.926 0.00 0.00 0.00 1.94
349 350 9.589111 TTTAGTTTTATCGCTCCTTTTTGTTTT 57.411 25.926 0.00 0.00 0.00 2.43
350 351 9.589111 TTTTAGTTTTATCGCTCCTTTTTGTTT 57.411 25.926 0.00 0.00 0.00 2.83
351 352 9.027129 GTTTTAGTTTTATCGCTCCTTTTTGTT 57.973 29.630 0.00 0.00 0.00 2.83
352 353 7.650504 GGTTTTAGTTTTATCGCTCCTTTTTGT 59.349 33.333 0.00 0.00 0.00 2.83
353 354 7.650104 TGGTTTTAGTTTTATCGCTCCTTTTTG 59.350 33.333 0.00 0.00 0.00 2.44
354 355 7.718525 TGGTTTTAGTTTTATCGCTCCTTTTT 58.281 30.769 0.00 0.00 0.00 1.94
355 356 7.279750 TGGTTTTAGTTTTATCGCTCCTTTT 57.720 32.000 0.00 0.00 0.00 2.27
356 357 6.072119 CCTGGTTTTAGTTTTATCGCTCCTTT 60.072 38.462 0.00 0.00 0.00 3.11
357 358 5.414765 CCTGGTTTTAGTTTTATCGCTCCTT 59.585 40.000 0.00 0.00 0.00 3.36
358 359 4.941873 CCTGGTTTTAGTTTTATCGCTCCT 59.058 41.667 0.00 0.00 0.00 3.69
359 360 4.095932 CCCTGGTTTTAGTTTTATCGCTCC 59.904 45.833 0.00 0.00 0.00 4.70
360 361 4.438336 GCCCTGGTTTTAGTTTTATCGCTC 60.438 45.833 0.00 0.00 0.00 5.03
361 362 3.442625 GCCCTGGTTTTAGTTTTATCGCT 59.557 43.478 0.00 0.00 0.00 4.93
362 363 3.428452 GGCCCTGGTTTTAGTTTTATCGC 60.428 47.826 0.00 0.00 0.00 4.58
363 364 3.129813 GGGCCCTGGTTTTAGTTTTATCG 59.870 47.826 17.04 0.00 0.00 2.92
364 365 4.350245 AGGGCCCTGGTTTTAGTTTTATC 58.650 43.478 28.05 0.00 0.00 1.75
365 366 4.350245 GAGGGCCCTGGTTTTAGTTTTAT 58.650 43.478 34.59 0.00 0.00 1.40
366 367 3.770046 GAGGGCCCTGGTTTTAGTTTTA 58.230 45.455 34.59 0.00 0.00 1.52
367 368 2.605257 GAGGGCCCTGGTTTTAGTTTT 58.395 47.619 34.59 0.00 0.00 2.43
368 369 1.546998 CGAGGGCCCTGGTTTTAGTTT 60.547 52.381 34.59 0.00 0.00 2.66
369 370 0.037734 CGAGGGCCCTGGTTTTAGTT 59.962 55.000 34.59 0.00 0.00 2.24
370 371 1.683441 CGAGGGCCCTGGTTTTAGT 59.317 57.895 34.59 0.00 0.00 2.24
371 372 1.077716 CCGAGGGCCCTGGTTTTAG 60.078 63.158 34.59 11.24 0.00 1.85
372 373 3.083386 CCGAGGGCCCTGGTTTTA 58.917 61.111 34.59 0.00 0.00 1.52
373 374 4.678743 GCCGAGGGCCCTGGTTTT 62.679 66.667 34.59 2.75 44.06 2.43
383 384 2.907897 GATTGTGAGACCGCCGAGGG 62.908 65.000 2.11 0.00 46.96 4.30
385 386 1.519455 GGATTGTGAGACCGCCGAG 60.519 63.158 0.00 0.00 0.00 4.63
386 387 1.945354 GAGGATTGTGAGACCGCCGA 61.945 60.000 0.00 0.00 0.00 5.54
387 388 1.519455 GAGGATTGTGAGACCGCCG 60.519 63.158 0.00 0.00 0.00 6.46
388 389 0.036388 TTGAGGATTGTGAGACCGCC 60.036 55.000 0.00 0.00 0.00 6.13
389 390 1.734465 CTTTGAGGATTGTGAGACCGC 59.266 52.381 0.00 0.00 0.00 5.68
390 391 1.734465 GCTTTGAGGATTGTGAGACCG 59.266 52.381 0.00 0.00 0.00 4.79
391 392 2.485814 GTGCTTTGAGGATTGTGAGACC 59.514 50.000 0.00 0.00 0.00 3.85
392 393 2.485814 GGTGCTTTGAGGATTGTGAGAC 59.514 50.000 0.00 0.00 0.00 3.36
393 394 2.783135 GGTGCTTTGAGGATTGTGAGA 58.217 47.619 0.00 0.00 0.00 3.27
394 395 1.466167 CGGTGCTTTGAGGATTGTGAG 59.534 52.381 0.00 0.00 0.00 3.51
395 396 1.522668 CGGTGCTTTGAGGATTGTGA 58.477 50.000 0.00 0.00 0.00 3.58
396 397 0.523072 CCGGTGCTTTGAGGATTGTG 59.477 55.000 0.00 0.00 0.00 3.33
397 398 1.244019 GCCGGTGCTTTGAGGATTGT 61.244 55.000 1.90 0.00 33.53 2.71
398 399 1.243342 TGCCGGTGCTTTGAGGATTG 61.243 55.000 1.90 0.00 38.71 2.67
399 400 1.074775 TGCCGGTGCTTTGAGGATT 59.925 52.632 1.90 0.00 38.71 3.01
400 401 1.675641 GTGCCGGTGCTTTGAGGAT 60.676 57.895 1.90 0.00 38.71 3.24
401 402 2.281484 GTGCCGGTGCTTTGAGGA 60.281 61.111 1.90 0.00 38.71 3.71
402 403 3.726517 CGTGCCGGTGCTTTGAGG 61.727 66.667 1.90 0.00 38.71 3.86
403 404 4.389576 GCGTGCCGGTGCTTTGAG 62.390 66.667 1.90 0.00 38.71 3.02
404 405 4.927782 AGCGTGCCGGTGCTTTGA 62.928 61.111 11.48 0.00 38.57 2.69
408 409 4.927782 TTGAAGCGTGCCGGTGCT 62.928 61.111 11.48 11.48 44.97 4.40
409 410 3.267597 ATTTGAAGCGTGCCGGTGC 62.268 57.895 1.90 5.20 37.73 5.01
410 411 1.154225 GATTTGAAGCGTGCCGGTG 60.154 57.895 1.90 0.00 37.73 4.94
411 412 0.960364 ATGATTTGAAGCGTGCCGGT 60.960 50.000 1.90 0.00 40.00 5.28
412 413 0.523968 CATGATTTGAAGCGTGCCGG 60.524 55.000 0.00 0.00 0.00 6.13
413 414 0.523968 CCATGATTTGAAGCGTGCCG 60.524 55.000 0.00 0.00 30.29 5.69
414 415 0.179129 CCCATGATTTGAAGCGTGCC 60.179 55.000 0.00 0.00 30.29 5.01
415 416 0.810648 TCCCATGATTTGAAGCGTGC 59.189 50.000 0.00 0.00 30.29 5.34
416 417 2.489329 AGTTCCCATGATTTGAAGCGTG 59.511 45.455 0.00 0.00 0.00 5.34
417 418 2.795329 AGTTCCCATGATTTGAAGCGT 58.205 42.857 0.00 0.00 0.00 5.07
418 419 3.855689 AAGTTCCCATGATTTGAAGCG 57.144 42.857 0.00 0.00 0.00 4.68
419 420 4.098501 CCCTAAGTTCCCATGATTTGAAGC 59.901 45.833 0.00 0.00 0.00 3.86
420 421 4.098501 GCCCTAAGTTCCCATGATTTGAAG 59.901 45.833 0.00 0.00 0.00 3.02
421 422 4.023291 GCCCTAAGTTCCCATGATTTGAA 58.977 43.478 0.00 0.00 0.00 2.69
422 423 3.631250 GCCCTAAGTTCCCATGATTTGA 58.369 45.455 0.00 0.00 0.00 2.69
423 424 2.358898 CGCCCTAAGTTCCCATGATTTG 59.641 50.000 0.00 0.00 0.00 2.32
424 425 2.241176 TCGCCCTAAGTTCCCATGATTT 59.759 45.455 0.00 0.00 0.00 2.17
425 426 1.843851 TCGCCCTAAGTTCCCATGATT 59.156 47.619 0.00 0.00 0.00 2.57
426 427 1.417890 CTCGCCCTAAGTTCCCATGAT 59.582 52.381 0.00 0.00 0.00 2.45
427 428 0.830648 CTCGCCCTAAGTTCCCATGA 59.169 55.000 0.00 0.00 0.00 3.07
428 429 0.541863 ACTCGCCCTAAGTTCCCATG 59.458 55.000 0.00 0.00 0.00 3.66
429 430 1.286248 AACTCGCCCTAAGTTCCCAT 58.714 50.000 0.00 0.00 31.36 4.00
430 431 1.061546 AAACTCGCCCTAAGTTCCCA 58.938 50.000 0.00 0.00 35.96 4.37
431 432 1.450025 CAAACTCGCCCTAAGTTCCC 58.550 55.000 0.00 0.00 35.96 3.97
432 433 1.271217 ACCAAACTCGCCCTAAGTTCC 60.271 52.381 0.00 0.00 35.96 3.62
433 434 2.180432 ACCAAACTCGCCCTAAGTTC 57.820 50.000 0.00 0.00 35.96 3.01
434 435 2.227194 CAACCAAACTCGCCCTAAGTT 58.773 47.619 0.00 0.00 38.59 2.66
435 436 1.892209 CAACCAAACTCGCCCTAAGT 58.108 50.000 0.00 0.00 0.00 2.24
436 437 0.521735 GCAACCAAACTCGCCCTAAG 59.478 55.000 0.00 0.00 0.00 2.18
437 438 0.891904 GGCAACCAAACTCGCCCTAA 60.892 55.000 0.00 0.00 38.67 2.69
529 530 2.107031 TCATGCTATGCAGGCCTAACAT 59.893 45.455 20.84 20.84 43.65 2.71
534 535 1.424302 AGAATCATGCTATGCAGGCCT 59.576 47.619 0.00 0.00 43.65 5.19
567 568 2.258013 TTTCCAACGAGCAAGGCCG 61.258 57.895 0.00 0.00 0.00 6.13
578 579 1.133869 CGATTCGGCCGTTTCCAAC 59.866 57.895 27.15 9.73 0.00 3.77
650 651 7.162082 AGGGAAGAGTGATTAAGTGTAAACAG 58.838 38.462 0.00 0.00 0.00 3.16
698 699 3.169908 AGTGAGGAGAAAGGGAAGAGTC 58.830 50.000 0.00 0.00 0.00 3.36
717 740 2.473760 CGCCGACGAGATCCAGAGT 61.474 63.158 0.00 0.00 43.93 3.24
755 778 2.518349 CCCCACGCAACACAAGGT 60.518 61.111 0.00 0.00 0.00 3.50
788 811 4.308458 CCGTGGACTGCGGGACAA 62.308 66.667 0.00 0.00 44.98 3.18
806 830 1.221566 CATGGCATCAGGGTCACGA 59.778 57.895 0.00 0.00 0.00 4.35
807 831 1.091771 GTCATGGCATCAGGGTCACG 61.092 60.000 0.00 0.00 0.00 4.35
870 894 1.674057 CTGTCCGTCCTCCTTGCTT 59.326 57.895 0.00 0.00 0.00 3.91
978 1002 3.642778 CTGCACGTACCCCGGTGAG 62.643 68.421 0.00 0.00 42.24 3.51
1081 1207 2.736682 CGAATCCGGCGTCCAACAC 61.737 63.158 6.01 0.00 0.00 3.32
1082 1208 2.433491 CGAATCCGGCGTCCAACA 60.433 61.111 6.01 0.00 0.00 3.33
1107 1233 4.742201 CTGCACGTAGCCGCCAGT 62.742 66.667 7.38 0.00 44.83 4.00
1173 1299 3.128938 CCTTGAAGTAGACTCCGTCGAAT 59.871 47.826 0.00 0.00 37.67 3.34
1182 1308 2.233431 CTGCAGCTCCTTGAAGTAGACT 59.767 50.000 0.00 0.00 0.00 3.24
1238 1364 2.359602 TCTCCGGCGACTCGAACT 60.360 61.111 9.30 0.00 0.00 3.01
1279 1405 1.282157 GAAGTAGCCCTGGTTCATGGT 59.718 52.381 0.00 0.00 0.00 3.55
1305 1431 1.379916 CATCCCCTGCTGGAACACA 59.620 57.895 11.88 0.00 38.10 3.72
1402 1528 4.671590 TCCTCCTCCACGCCGTCA 62.672 66.667 0.00 0.00 0.00 4.35
1626 1779 3.393970 CCTCGCTGGCCTTCCTCA 61.394 66.667 3.32 0.00 0.00 3.86
1822 1975 4.201657 TGGCATCTCATTTCATCGAACAT 58.798 39.130 0.00 0.00 0.00 2.71
1830 1983 3.765381 TCAGGTTTGGCATCTCATTTCA 58.235 40.909 0.00 0.00 0.00 2.69
1851 2004 6.097696 AGTTAACAACAAAGCTTAACACCCAT 59.902 34.615 8.61 0.00 34.24 4.00
1900 2212 5.624344 TGTAATTTTTATCCGGCGTTTGA 57.376 34.783 6.01 0.00 0.00 2.69
1920 2232 5.661056 TTAAGGTCTTGTCATCGAGATGT 57.339 39.130 12.22 0.00 39.72 3.06
1939 2253 5.184864 CCAGTTGATTGGTTGCCTGTATTAA 59.815 40.000 0.00 0.00 33.38 1.40
2031 2359 4.837093 TTGGTTAGTTTCTCCATCGGAT 57.163 40.909 0.00 0.00 0.00 4.18
2065 2393 6.479331 GCGGATGACACGTATCTATAGAGATA 59.521 42.308 8.70 2.88 42.66 1.98
2066 2394 5.294799 GCGGATGACACGTATCTATAGAGAT 59.705 44.000 8.70 5.03 44.90 2.75
2067 2395 4.630505 GCGGATGACACGTATCTATAGAGA 59.369 45.833 8.70 0.00 35.71 3.10
2068 2396 4.201832 GGCGGATGACACGTATCTATAGAG 60.202 50.000 8.70 0.00 0.00 2.43
2069 2397 3.688185 GGCGGATGACACGTATCTATAGA 59.312 47.826 4.57 4.57 0.00 1.98
2070 2398 3.690139 AGGCGGATGACACGTATCTATAG 59.310 47.826 0.00 0.00 0.00 1.31
2071 2399 3.682696 AGGCGGATGACACGTATCTATA 58.317 45.455 0.00 0.00 0.00 1.31
2072 2400 2.515854 AGGCGGATGACACGTATCTAT 58.484 47.619 0.00 0.00 0.00 1.98
2073 2401 1.977056 AGGCGGATGACACGTATCTA 58.023 50.000 0.00 0.00 0.00 1.98
2074 2402 1.067212 GAAGGCGGATGACACGTATCT 59.933 52.381 0.00 0.00 0.00 1.98
2075 2403 1.488527 GAAGGCGGATGACACGTATC 58.511 55.000 0.00 0.00 0.00 2.24
2076 2404 0.248907 CGAAGGCGGATGACACGTAT 60.249 55.000 0.00 0.00 0.00 3.06
2077 2405 1.138036 CGAAGGCGGATGACACGTA 59.862 57.895 0.00 0.00 0.00 3.57
2078 2406 2.126071 CGAAGGCGGATGACACGT 60.126 61.111 0.00 0.00 0.00 4.49
2079 2407 2.126071 ACGAAGGCGGATGACACG 60.126 61.111 0.00 0.00 43.17 4.49
2080 2408 0.802607 GAGACGAAGGCGGATGACAC 60.803 60.000 0.00 0.00 43.17 3.67
2081 2409 1.248101 TGAGACGAAGGCGGATGACA 61.248 55.000 0.00 0.00 43.17 3.58
2082 2410 0.103208 ATGAGACGAAGGCGGATGAC 59.897 55.000 0.00 0.00 43.17 3.06
2083 2411 0.824109 AATGAGACGAAGGCGGATGA 59.176 50.000 0.00 0.00 43.17 2.92
2084 2412 1.202463 AGAATGAGACGAAGGCGGATG 60.202 52.381 0.00 0.00 43.17 3.51
2085 2413 1.067821 GAGAATGAGACGAAGGCGGAT 59.932 52.381 0.00 0.00 43.17 4.18
2086 2414 0.456221 GAGAATGAGACGAAGGCGGA 59.544 55.000 0.00 0.00 43.17 5.54
2087 2415 0.173481 TGAGAATGAGACGAAGGCGG 59.827 55.000 0.00 0.00 43.17 6.13
2088 2416 2.123342 GATGAGAATGAGACGAAGGCG 58.877 52.381 0.00 0.00 44.79 5.52
2089 2417 2.159043 TGGATGAGAATGAGACGAAGGC 60.159 50.000 0.00 0.00 0.00 4.35
2090 2418 3.808466 TGGATGAGAATGAGACGAAGG 57.192 47.619 0.00 0.00 0.00 3.46
2091 2419 4.749099 GGAATGGATGAGAATGAGACGAAG 59.251 45.833 0.00 0.00 0.00 3.79
2092 2420 4.697514 GGAATGGATGAGAATGAGACGAA 58.302 43.478 0.00 0.00 0.00 3.85
2093 2421 3.243535 CGGAATGGATGAGAATGAGACGA 60.244 47.826 0.00 0.00 0.00 4.20
2094 2422 3.055591 CGGAATGGATGAGAATGAGACG 58.944 50.000 0.00 0.00 0.00 4.18
2095 2423 4.305769 CTCGGAATGGATGAGAATGAGAC 58.694 47.826 0.00 0.00 31.31 3.36
2096 2424 3.244009 GCTCGGAATGGATGAGAATGAGA 60.244 47.826 0.00 0.00 31.31 3.27
2097 2425 3.065655 GCTCGGAATGGATGAGAATGAG 58.934 50.000 0.00 0.00 31.31 2.90
2098 2426 2.702478 AGCTCGGAATGGATGAGAATGA 59.298 45.455 0.00 0.00 31.31 2.57
2099 2427 3.065655 GAGCTCGGAATGGATGAGAATG 58.934 50.000 0.00 0.00 31.31 2.67
2100 2428 2.038295 GGAGCTCGGAATGGATGAGAAT 59.962 50.000 7.83 0.00 31.31 2.40
2101 2429 1.414181 GGAGCTCGGAATGGATGAGAA 59.586 52.381 7.83 0.00 31.31 2.87
2102 2430 1.043816 GGAGCTCGGAATGGATGAGA 58.956 55.000 7.83 0.00 31.31 3.27
2103 2431 0.755079 TGGAGCTCGGAATGGATGAG 59.245 55.000 7.83 0.00 0.00 2.90
2104 2432 0.755079 CTGGAGCTCGGAATGGATGA 59.245 55.000 7.83 0.00 0.00 2.92
2105 2433 0.883814 GCTGGAGCTCGGAATGGATG 60.884 60.000 7.83 0.00 38.21 3.51
2106 2434 1.449353 GCTGGAGCTCGGAATGGAT 59.551 57.895 7.83 0.00 38.21 3.41
2107 2435 2.903357 GCTGGAGCTCGGAATGGA 59.097 61.111 7.83 0.00 38.21 3.41
2132 2460 4.817464 AGTAGTATGTTCCGAGCTAGTGAG 59.183 45.833 0.00 0.00 0.00 3.51
2133 2461 4.575236 CAGTAGTATGTTCCGAGCTAGTGA 59.425 45.833 0.00 0.00 35.99 3.41
2134 2462 4.790123 GCAGTAGTATGTTCCGAGCTAGTG 60.790 50.000 0.00 0.00 36.62 2.74
2135 2463 3.315749 GCAGTAGTATGTTCCGAGCTAGT 59.684 47.826 0.00 0.00 0.00 2.57
2136 2464 3.304794 GGCAGTAGTATGTTCCGAGCTAG 60.305 52.174 0.00 0.00 0.00 3.42
2137 2465 2.621998 GGCAGTAGTATGTTCCGAGCTA 59.378 50.000 0.00 0.00 0.00 3.32
2138 2466 1.409427 GGCAGTAGTATGTTCCGAGCT 59.591 52.381 0.00 0.00 0.00 4.09
2139 2467 1.409427 AGGCAGTAGTATGTTCCGAGC 59.591 52.381 0.00 0.00 0.00 5.03
2140 2468 2.287069 CGAGGCAGTAGTATGTTCCGAG 60.287 54.545 0.00 0.00 0.00 4.63
2141 2469 1.674441 CGAGGCAGTAGTATGTTCCGA 59.326 52.381 0.00 0.00 0.00 4.55
2142 2470 1.864435 GCGAGGCAGTAGTATGTTCCG 60.864 57.143 0.00 0.00 0.00 4.30
2143 2471 1.409427 AGCGAGGCAGTAGTATGTTCC 59.591 52.381 0.00 0.00 0.00 3.62
2144 2472 2.873133 AGCGAGGCAGTAGTATGTTC 57.127 50.000 0.00 0.00 0.00 3.18
2145 2473 3.021695 TGTAGCGAGGCAGTAGTATGTT 58.978 45.455 0.00 0.00 0.00 2.71
2146 2474 2.358267 GTGTAGCGAGGCAGTAGTATGT 59.642 50.000 0.00 0.00 0.00 2.29
2147 2475 2.602456 CGTGTAGCGAGGCAGTAGTATG 60.602 54.545 0.00 0.00 44.77 2.39
2148 2476 1.602851 CGTGTAGCGAGGCAGTAGTAT 59.397 52.381 0.00 0.00 44.77 2.12
2149 2477 1.012086 CGTGTAGCGAGGCAGTAGTA 58.988 55.000 0.00 0.00 44.77 1.82
2150 2478 1.801332 CGTGTAGCGAGGCAGTAGT 59.199 57.895 0.00 0.00 44.77 2.73
2151 2479 1.586564 GCGTGTAGCGAGGCAGTAG 60.587 63.158 0.00 0.00 44.77 2.57
2152 2480 2.488355 GCGTGTAGCGAGGCAGTA 59.512 61.111 0.00 0.00 44.77 2.74
2169 2497 2.358615 TTGCTGCAGCCGTGTAGG 60.359 61.111 34.64 0.00 44.97 3.18
2170 2498 1.960763 TGTTGCTGCAGCCGTGTAG 60.961 57.895 34.64 0.00 41.18 2.74
2171 2499 2.110006 TGTTGCTGCAGCCGTGTA 59.890 55.556 34.64 14.24 41.18 2.90
2172 2500 3.585990 GTGTTGCTGCAGCCGTGT 61.586 61.111 34.64 0.00 41.18 4.49
2173 2501 4.332637 GGTGTTGCTGCAGCCGTG 62.333 66.667 34.64 0.00 41.18 4.94
2174 2502 4.873810 TGGTGTTGCTGCAGCCGT 62.874 61.111 34.64 0.00 41.18 5.68
2175 2503 4.332637 GTGGTGTTGCTGCAGCCG 62.333 66.667 34.64 0.75 41.18 5.52
2176 2504 2.784356 TTGTGGTGTTGCTGCAGCC 61.784 57.895 34.64 21.13 41.18 4.85
2177 2505 1.589727 GTTGTGGTGTTGCTGCAGC 60.590 57.895 31.89 31.89 42.50 5.25
2178 2506 1.066257 GGTTGTGGTGTTGCTGCAG 59.934 57.895 10.11 10.11 0.00 4.41
2179 2507 2.422231 GGGTTGTGGTGTTGCTGCA 61.422 57.895 0.00 0.00 0.00 4.41
2180 2508 2.417097 GGGTTGTGGTGTTGCTGC 59.583 61.111 0.00 0.00 0.00 5.25
2181 2509 1.037030 AGTGGGTTGTGGTGTTGCTG 61.037 55.000 0.00 0.00 0.00 4.41
2182 2510 0.751643 GAGTGGGTTGTGGTGTTGCT 60.752 55.000 0.00 0.00 0.00 3.91
2183 2511 0.751643 AGAGTGGGTTGTGGTGTTGC 60.752 55.000 0.00 0.00 0.00 4.17
2184 2512 1.308998 GAGAGTGGGTTGTGGTGTTG 58.691 55.000 0.00 0.00 0.00 3.33
2185 2513 0.179056 CGAGAGTGGGTTGTGGTGTT 60.179 55.000 0.00 0.00 0.00 3.32
2186 2514 1.046472 TCGAGAGTGGGTTGTGGTGT 61.046 55.000 0.00 0.00 0.00 4.16
2187 2515 0.600255 GTCGAGAGTGGGTTGTGGTG 60.600 60.000 0.00 0.00 0.00 4.17
2188 2516 0.759436 AGTCGAGAGTGGGTTGTGGT 60.759 55.000 0.00 0.00 0.00 4.16
2189 2517 0.038159 GAGTCGAGAGTGGGTTGTGG 60.038 60.000 0.00 0.00 0.00 4.17
2190 2518 0.962489 AGAGTCGAGAGTGGGTTGTG 59.038 55.000 0.00 0.00 0.00 3.33
2191 2519 2.438411 CTAGAGTCGAGAGTGGGTTGT 58.562 52.381 0.00 0.00 0.00 3.32
2192 2520 1.133407 GCTAGAGTCGAGAGTGGGTTG 59.867 57.143 4.21 0.00 0.00 3.77
2193 2521 1.004979 AGCTAGAGTCGAGAGTGGGTT 59.995 52.381 4.21 0.00 0.00 4.11
2194 2522 0.621609 AGCTAGAGTCGAGAGTGGGT 59.378 55.000 4.21 0.00 0.00 4.51
2195 2523 1.021202 CAGCTAGAGTCGAGAGTGGG 58.979 60.000 4.21 0.00 0.00 4.61
2196 2524 0.380378 GCAGCTAGAGTCGAGAGTGG 59.620 60.000 4.21 0.00 0.00 4.00
2197 2525 0.027455 CGCAGCTAGAGTCGAGAGTG 59.973 60.000 4.21 1.98 0.00 3.51
2198 2526 0.108089 TCGCAGCTAGAGTCGAGAGT 60.108 55.000 4.21 0.00 0.00 3.24
2199 2527 2.684128 TCGCAGCTAGAGTCGAGAG 58.316 57.895 4.21 0.00 0.00 3.20
2200 2528 4.934989 TCGCAGCTAGAGTCGAGA 57.065 55.556 4.21 0.00 0.00 4.04
2201 2529 0.027455 CACTCGCAGCTAGAGTCGAG 59.973 60.000 17.94 19.42 46.16 4.04
2202 2530 0.391263 TCACTCGCAGCTAGAGTCGA 60.391 55.000 17.94 15.62 46.16 4.20
2203 2531 0.660488 ATCACTCGCAGCTAGAGTCG 59.340 55.000 17.94 14.10 46.16 4.18
2204 2532 1.268999 CCATCACTCGCAGCTAGAGTC 60.269 57.143 17.94 0.00 46.16 3.36
2206 2534 1.028130 TCCATCACTCGCAGCTAGAG 58.972 55.000 14.65 14.65 41.27 2.43
2207 2535 0.741326 GTCCATCACTCGCAGCTAGA 59.259 55.000 0.00 0.00 0.00 2.43
2208 2536 0.457443 TGTCCATCACTCGCAGCTAG 59.543 55.000 0.00 0.00 0.00 3.42
2209 2537 0.173481 GTGTCCATCACTCGCAGCTA 59.827 55.000 0.00 0.00 43.13 3.32
2210 2538 1.079543 GTGTCCATCACTCGCAGCT 60.080 57.895 0.00 0.00 43.13 4.24
2211 2539 2.103042 GGTGTCCATCACTCGCAGC 61.103 63.158 0.00 0.00 45.50 5.25
2212 2540 1.807165 CGGTGTCCATCACTCGCAG 60.807 63.158 0.00 0.00 45.50 5.18
2213 2541 2.094757 AACGGTGTCCATCACTCGCA 62.095 55.000 0.00 0.00 45.50 5.10
2214 2542 1.374252 AACGGTGTCCATCACTCGC 60.374 57.895 0.00 0.00 45.50 5.03
2215 2543 1.626654 GCAACGGTGTCCATCACTCG 61.627 60.000 0.66 0.00 45.50 4.18
2216 2544 1.298859 GGCAACGGTGTCCATCACTC 61.299 60.000 0.66 0.00 45.50 3.51
2217 2545 1.302511 GGCAACGGTGTCCATCACT 60.303 57.895 0.66 0.00 45.50 3.41
2218 2546 3.263941 GGCAACGGTGTCCATCAC 58.736 61.111 0.66 0.00 45.47 3.06
2236 2564 3.741476 CTCAAACTGCGGCCAGGC 61.741 66.667 1.26 1.26 43.53 4.85
2237 2565 3.058160 CCTCAAACTGCGGCCAGG 61.058 66.667 2.24 0.00 43.53 4.45
2238 2566 3.058160 CCCTCAAACTGCGGCCAG 61.058 66.667 2.24 0.00 44.80 4.85
2239 2567 4.659172 CCCCTCAAACTGCGGCCA 62.659 66.667 2.24 0.00 0.00 5.36
2242 2570 2.597217 TTGCCCCTCAAACTGCGG 60.597 61.111 0.00 0.00 0.00 5.69
2243 2571 1.580845 CTCTTGCCCCTCAAACTGCG 61.581 60.000 0.00 0.00 33.65 5.18
2244 2572 0.538287 ACTCTTGCCCCTCAAACTGC 60.538 55.000 0.00 0.00 33.65 4.40
2245 2573 2.224523 TGTACTCTTGCCCCTCAAACTG 60.225 50.000 0.00 0.00 33.65 3.16
2246 2574 2.054799 TGTACTCTTGCCCCTCAAACT 58.945 47.619 0.00 0.00 33.65 2.66
2247 2575 2.561478 TGTACTCTTGCCCCTCAAAC 57.439 50.000 0.00 0.00 33.65 2.93
2248 2576 2.642311 TCATGTACTCTTGCCCCTCAAA 59.358 45.455 0.00 0.00 33.65 2.69
2249 2577 2.027192 GTCATGTACTCTTGCCCCTCAA 60.027 50.000 0.00 0.00 0.00 3.02
2250 2578 1.555075 GTCATGTACTCTTGCCCCTCA 59.445 52.381 0.00 0.00 0.00 3.86
2251 2579 1.471676 CGTCATGTACTCTTGCCCCTC 60.472 57.143 0.00 0.00 0.00 4.30
2252 2580 0.537188 CGTCATGTACTCTTGCCCCT 59.463 55.000 0.00 0.00 0.00 4.79
2253 2581 0.462047 CCGTCATGTACTCTTGCCCC 60.462 60.000 0.00 0.00 0.00 5.80
2254 2582 0.249398 ACCGTCATGTACTCTTGCCC 59.751 55.000 0.00 0.00 0.00 5.36
2255 2583 1.337823 ACACCGTCATGTACTCTTGCC 60.338 52.381 0.00 0.00 0.00 4.52
2256 2584 1.726791 CACACCGTCATGTACTCTTGC 59.273 52.381 0.00 0.00 0.00 4.01
2257 2585 2.337583 CCACACCGTCATGTACTCTTG 58.662 52.381 0.00 0.00 0.00 3.02
2258 2586 1.337823 GCCACACCGTCATGTACTCTT 60.338 52.381 0.00 0.00 0.00 2.85
2259 2587 0.246635 GCCACACCGTCATGTACTCT 59.753 55.000 0.00 0.00 0.00 3.24
2260 2588 0.739813 GGCCACACCGTCATGTACTC 60.740 60.000 0.00 0.00 0.00 2.59
2261 2589 1.295423 GGCCACACCGTCATGTACT 59.705 57.895 0.00 0.00 0.00 2.73
2262 2590 3.884900 GGCCACACCGTCATGTAC 58.115 61.111 0.00 0.00 0.00 2.90
2272 2600 4.767255 CTGCTCCTCCGGCCACAC 62.767 72.222 2.24 0.00 0.00 3.82
2277 2605 2.442272 TACTCCTGCTCCTCCGGC 60.442 66.667 0.00 0.00 0.00 6.13
2278 2606 2.128507 GGTACTCCTGCTCCTCCGG 61.129 68.421 0.00 0.00 0.00 5.14
2279 2607 2.482333 CGGTACTCCTGCTCCTCCG 61.482 68.421 0.00 0.00 0.00 4.63
2280 2608 2.128507 CCGGTACTCCTGCTCCTCC 61.129 68.421 0.00 0.00 0.00 4.30
2281 2609 1.076923 TCCGGTACTCCTGCTCCTC 60.077 63.158 0.00 0.00 0.00 3.71
2282 2610 1.380112 GTCCGGTACTCCTGCTCCT 60.380 63.158 0.00 0.00 0.00 3.69
2283 2611 2.772691 CGTCCGGTACTCCTGCTCC 61.773 68.421 0.00 0.00 0.00 4.70
2284 2612 2.772691 CCGTCCGGTACTCCTGCTC 61.773 68.421 0.00 0.00 0.00 4.26
2285 2613 2.754658 CCGTCCGGTACTCCTGCT 60.755 66.667 0.00 0.00 0.00 4.24
2296 2624 4.415332 CTCCGACCACACCGTCCG 62.415 72.222 0.00 0.00 0.00 4.79
2297 2625 4.736896 GCTCCGACCACACCGTCC 62.737 72.222 0.00 0.00 0.00 4.79
2298 2626 4.736896 GGCTCCGACCACACCGTC 62.737 72.222 0.00 0.00 0.00 4.79
2332 2660 3.207669 CTGCAGCTTGATCCGCCC 61.208 66.667 0.00 0.00 0.00 6.13
2333 2661 3.207669 CCTGCAGCTTGATCCGCC 61.208 66.667 8.66 0.00 0.00 6.13
2334 2662 2.124983 TCCTGCAGCTTGATCCGC 60.125 61.111 8.66 0.00 0.00 5.54
2335 2663 0.809241 GTCTCCTGCAGCTTGATCCG 60.809 60.000 8.66 0.00 0.00 4.18
2336 2664 0.809241 CGTCTCCTGCAGCTTGATCC 60.809 60.000 8.66 0.00 0.00 3.36
2337 2665 1.427592 GCGTCTCCTGCAGCTTGATC 61.428 60.000 8.66 0.00 0.00 2.92
2338 2666 1.449246 GCGTCTCCTGCAGCTTGAT 60.449 57.895 8.66 0.00 0.00 2.57
2339 2667 2.047844 GCGTCTCCTGCAGCTTGA 60.048 61.111 8.66 2.68 0.00 3.02
2340 2668 3.485431 CGCGTCTCCTGCAGCTTG 61.485 66.667 8.66 0.00 0.00 4.01


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.