Multiple sequence alignment - TraesCS5B01G311600

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G311600 chr5B 100.000 2609 0 0 1 2609 493170055 493167447 0.000000e+00 4819.0
1 TraesCS5B01G311600 chr5B 87.452 526 53 7 1014 1528 493160055 493159532 6.220000e-166 593.0
2 TraesCS5B01G311600 chr5B 85.792 366 50 2 1033 1397 492782546 492782910 1.130000e-103 387.0
3 TraesCS5B01G311600 chr5B 85.792 366 50 2 1033 1397 493086671 493086307 1.130000e-103 387.0
4 TraesCS5B01G311600 chr5A 91.416 1759 68 36 393 2126 522612491 522610791 0.000000e+00 2335.0
5 TraesCS5B01G311600 chr5A 86.424 523 50 13 1014 1524 522605545 522605032 1.060000e-153 553.0
6 TraesCS5B01G311600 chr5A 85.479 365 53 0 1033 1397 522104294 522104658 5.270000e-102 381.0
7 TraesCS5B01G311600 chr5A 96.599 147 4 1 2404 2550 522610802 522610657 2.590000e-60 243.0
8 TraesCS5B01G311600 chr5A 87.879 132 15 1 129 260 522612863 522612733 1.250000e-33 154.0
9 TraesCS5B01G311600 chr5D 93.268 1114 54 16 995 2106 410846897 410845803 0.000000e+00 1622.0
10 TraesCS5B01G311600 chr5D 87.266 534 55 7 1006 1528 410843281 410842750 4.810000e-167 597.0
11 TraesCS5B01G311600 chr5D 77.916 883 80 50 148 959 410847734 410846896 6.630000e-121 444.0
12 TraesCS5B01G311600 chr5D 84.890 364 55 0 1033 1396 410539203 410539566 4.100000e-98 368.0
13 TraesCS5B01G311600 chr5D 95.631 206 9 0 2404 2609 410845763 410845558 5.380000e-87 331.0
14 TraesCS5B01G311600 chr5D 100.000 34 0 0 2095 2128 410845783 410845750 2.170000e-06 63.9
15 TraesCS5B01G311600 chr7B 97.535 284 6 1 2127 2409 64478380 64478097 3.900000e-133 484.0
16 TraesCS5B01G311600 chr1A 98.535 273 4 0 2131 2403 397112608 397112336 1.400000e-132 483.0
17 TraesCS5B01G311600 chr4B 98.881 268 3 0 2136 2403 285579961 285579694 1.820000e-131 479.0
18 TraesCS5B01G311600 chr2B 96.825 189 6 0 2215 2403 459249427 459249615 1.510000e-82 316.0
19 TraesCS5B01G311600 chr2B 96.341 82 3 0 2154 2235 459249345 459249426 4.530000e-28 135.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G311600 chr5B 493167447 493170055 2608 True 4819.000000 4819 100.000000 1 2609 1 chr5B.!!$R3 2608
1 TraesCS5B01G311600 chr5B 493159532 493160055 523 True 593.000000 593 87.452000 1014 1528 1 chr5B.!!$R2 514
2 TraesCS5B01G311600 chr5A 522610657 522612863 2206 True 910.666667 2335 91.964667 129 2550 3 chr5A.!!$R2 2421
3 TraesCS5B01G311600 chr5A 522605032 522605545 513 True 553.000000 553 86.424000 1014 1524 1 chr5A.!!$R1 510
4 TraesCS5B01G311600 chr5D 410842750 410847734 4984 True 611.580000 1622 90.816200 148 2609 5 chr5D.!!$R1 2461

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
109 110 0.111061 TTGGTCTTCCACATGCAGCT 59.889 50.0 0.0 0.0 44.22 4.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1622 1847 0.321122 GGTGGGACAGAAGTGCAGAG 60.321 60.0 0.0 0.0 41.8 3.35 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.629079 GTTTTTGTCTCTGGGTCTATTGG 57.371 43.478 0.00 0.00 0.00 3.16
23 24 3.350219 TTTGTCTCTGGGTCTATTGGC 57.650 47.619 0.00 0.00 0.00 4.52
24 25 2.254152 TGTCTCTGGGTCTATTGGCT 57.746 50.000 0.00 0.00 0.00 4.75
25 26 2.111384 TGTCTCTGGGTCTATTGGCTC 58.889 52.381 0.00 0.00 0.00 4.70
26 27 2.292521 TGTCTCTGGGTCTATTGGCTCT 60.293 50.000 0.00 0.00 0.00 4.09
27 28 2.364002 GTCTCTGGGTCTATTGGCTCTC 59.636 54.545 0.00 0.00 0.00 3.20
28 29 1.691434 CTCTGGGTCTATTGGCTCTCC 59.309 57.143 0.00 0.00 0.00 3.71
29 30 1.292242 TCTGGGTCTATTGGCTCTCCT 59.708 52.381 0.00 0.00 0.00 3.69
30 31 2.518407 TCTGGGTCTATTGGCTCTCCTA 59.482 50.000 0.00 0.00 0.00 2.94
31 32 3.052109 TCTGGGTCTATTGGCTCTCCTAA 60.052 47.826 0.00 0.00 0.00 2.69
32 33 3.906846 CTGGGTCTATTGGCTCTCCTAAT 59.093 47.826 0.00 0.00 0.00 1.73
33 34 3.904339 TGGGTCTATTGGCTCTCCTAATC 59.096 47.826 0.00 0.00 0.00 1.75
34 35 4.164204 GGGTCTATTGGCTCTCCTAATCT 58.836 47.826 0.00 0.00 0.00 2.40
35 36 4.595350 GGGTCTATTGGCTCTCCTAATCTT 59.405 45.833 0.00 0.00 0.00 2.40
36 37 5.512232 GGGTCTATTGGCTCTCCTAATCTTG 60.512 48.000 0.00 0.00 0.00 3.02
37 38 5.512232 GGTCTATTGGCTCTCCTAATCTTGG 60.512 48.000 0.00 0.00 0.00 3.61
38 39 5.071115 GTCTATTGGCTCTCCTAATCTTGGT 59.929 44.000 0.00 0.00 0.00 3.67
39 40 3.914426 TTGGCTCTCCTAATCTTGGTC 57.086 47.619 0.00 0.00 0.00 4.02
40 41 3.121929 TGGCTCTCCTAATCTTGGTCT 57.878 47.619 0.00 0.00 0.00 3.85
41 42 3.454858 TGGCTCTCCTAATCTTGGTCTT 58.545 45.455 0.00 0.00 0.00 3.01
42 43 3.846588 TGGCTCTCCTAATCTTGGTCTTT 59.153 43.478 0.00 0.00 0.00 2.52
43 44 4.195416 GGCTCTCCTAATCTTGGTCTTTG 58.805 47.826 0.00 0.00 0.00 2.77
44 45 4.323868 GGCTCTCCTAATCTTGGTCTTTGT 60.324 45.833 0.00 0.00 0.00 2.83
45 46 5.249420 GCTCTCCTAATCTTGGTCTTTGTT 58.751 41.667 0.00 0.00 0.00 2.83
46 47 5.123027 GCTCTCCTAATCTTGGTCTTTGTTG 59.877 44.000 0.00 0.00 0.00 3.33
47 48 6.187727 TCTCCTAATCTTGGTCTTTGTTGT 57.812 37.500 0.00 0.00 0.00 3.32
48 49 5.997746 TCTCCTAATCTTGGTCTTTGTTGTG 59.002 40.000 0.00 0.00 0.00 3.33
49 50 5.690865 TCCTAATCTTGGTCTTTGTTGTGT 58.309 37.500 0.00 0.00 0.00 3.72
50 51 5.530915 TCCTAATCTTGGTCTTTGTTGTGTG 59.469 40.000 0.00 0.00 0.00 3.82
51 52 5.299279 CCTAATCTTGGTCTTTGTTGTGTGT 59.701 40.000 0.00 0.00 0.00 3.72
52 53 5.659440 AATCTTGGTCTTTGTTGTGTGTT 57.341 34.783 0.00 0.00 0.00 3.32
53 54 5.659440 ATCTTGGTCTTTGTTGTGTGTTT 57.341 34.783 0.00 0.00 0.00 2.83
54 55 4.804108 TCTTGGTCTTTGTTGTGTGTTTG 58.196 39.130 0.00 0.00 0.00 2.93
55 56 4.279671 TCTTGGTCTTTGTTGTGTGTTTGT 59.720 37.500 0.00 0.00 0.00 2.83
56 57 4.592485 TGGTCTTTGTTGTGTGTTTGTT 57.408 36.364 0.00 0.00 0.00 2.83
57 58 4.950050 TGGTCTTTGTTGTGTGTTTGTTT 58.050 34.783 0.00 0.00 0.00 2.83
58 59 5.360591 TGGTCTTTGTTGTGTGTTTGTTTT 58.639 33.333 0.00 0.00 0.00 2.43
59 60 5.817816 TGGTCTTTGTTGTGTGTTTGTTTTT 59.182 32.000 0.00 0.00 0.00 1.94
60 61 6.132724 GGTCTTTGTTGTGTGTTTGTTTTTG 58.867 36.000 0.00 0.00 0.00 2.44
61 62 6.238239 GGTCTTTGTTGTGTGTTTGTTTTTGT 60.238 34.615 0.00 0.00 0.00 2.83
62 63 6.843779 GTCTTTGTTGTGTGTTTGTTTTTGTC 59.156 34.615 0.00 0.00 0.00 3.18
63 64 5.659048 TTGTTGTGTGTTTGTTTTTGTCC 57.341 34.783 0.00 0.00 0.00 4.02
64 65 4.058817 TGTTGTGTGTTTGTTTTTGTCCC 58.941 39.130 0.00 0.00 0.00 4.46
65 66 3.320673 TGTGTGTTTGTTTTTGTCCCC 57.679 42.857 0.00 0.00 0.00 4.81
66 67 2.263945 GTGTGTTTGTTTTTGTCCCCG 58.736 47.619 0.00 0.00 0.00 5.73
67 68 1.204941 TGTGTTTGTTTTTGTCCCCGG 59.795 47.619 0.00 0.00 0.00 5.73
68 69 0.824759 TGTTTGTTTTTGTCCCCGGG 59.175 50.000 15.80 15.80 0.00 5.73
69 70 0.825410 GTTTGTTTTTGTCCCCGGGT 59.175 50.000 21.85 0.00 0.00 5.28
70 71 1.112950 TTTGTTTTTGTCCCCGGGTC 58.887 50.000 21.85 12.95 0.00 4.46
71 72 0.259356 TTGTTTTTGTCCCCGGGTCT 59.741 50.000 21.85 0.00 0.00 3.85
72 73 1.138568 TGTTTTTGTCCCCGGGTCTA 58.861 50.000 21.85 6.35 0.00 2.59
73 74 1.202794 TGTTTTTGTCCCCGGGTCTAC 60.203 52.381 21.85 15.09 0.00 2.59
74 75 1.072806 GTTTTTGTCCCCGGGTCTACT 59.927 52.381 21.85 0.00 0.00 2.57
75 76 0.688487 TTTTGTCCCCGGGTCTACTG 59.312 55.000 21.85 2.11 0.00 2.74
76 77 1.196104 TTTGTCCCCGGGTCTACTGG 61.196 60.000 21.85 1.24 45.92 4.00
77 78 3.468140 GTCCCCGGGTCTACTGGC 61.468 72.222 21.85 0.00 44.91 4.85
78 79 3.680196 TCCCCGGGTCTACTGGCT 61.680 66.667 21.85 0.00 44.91 4.75
79 80 3.155167 CCCCGGGTCTACTGGCTC 61.155 72.222 21.85 0.00 44.91 4.70
80 81 2.042843 CCCGGGTCTACTGGCTCT 60.043 66.667 14.18 0.00 44.91 4.09
81 82 1.229359 CCCGGGTCTACTGGCTCTA 59.771 63.158 14.18 0.00 44.91 2.43
82 83 0.178958 CCCGGGTCTACTGGCTCTAT 60.179 60.000 14.18 0.00 44.91 1.98
83 84 1.705873 CCGGGTCTACTGGCTCTATT 58.294 55.000 0.00 0.00 39.19 1.73
84 85 2.040178 CCGGGTCTACTGGCTCTATTT 58.960 52.381 0.00 0.00 39.19 1.40
85 86 2.036089 CCGGGTCTACTGGCTCTATTTC 59.964 54.545 0.00 0.00 39.19 2.17
86 87 2.287668 CGGGTCTACTGGCTCTATTTCG 60.288 54.545 0.00 0.00 0.00 3.46
87 88 2.957006 GGGTCTACTGGCTCTATTTCGA 59.043 50.000 0.00 0.00 0.00 3.71
88 89 3.574826 GGGTCTACTGGCTCTATTTCGAT 59.425 47.826 0.00 0.00 0.00 3.59
89 90 4.321378 GGGTCTACTGGCTCTATTTCGATC 60.321 50.000 0.00 0.00 0.00 3.69
90 91 4.521256 GGTCTACTGGCTCTATTTCGATCT 59.479 45.833 0.00 0.00 0.00 2.75
91 92 5.010213 GGTCTACTGGCTCTATTTCGATCTT 59.990 44.000 0.00 0.00 0.00 2.40
92 93 5.918011 GTCTACTGGCTCTATTTCGATCTTG 59.082 44.000 0.00 0.00 0.00 3.02
93 94 4.065321 ACTGGCTCTATTTCGATCTTGG 57.935 45.455 0.00 0.00 0.00 3.61
94 95 3.452627 ACTGGCTCTATTTCGATCTTGGT 59.547 43.478 0.00 0.00 0.00 3.67
95 96 4.054671 CTGGCTCTATTTCGATCTTGGTC 58.945 47.826 0.00 0.00 0.00 4.02
96 97 3.706594 TGGCTCTATTTCGATCTTGGTCT 59.293 43.478 0.00 0.00 0.00 3.85
97 98 4.162320 TGGCTCTATTTCGATCTTGGTCTT 59.838 41.667 0.00 0.00 0.00 3.01
98 99 4.747605 GGCTCTATTTCGATCTTGGTCTTC 59.252 45.833 0.00 0.00 0.00 2.87
99 100 4.747605 GCTCTATTTCGATCTTGGTCTTCC 59.252 45.833 0.00 0.00 0.00 3.46
100 101 5.682471 GCTCTATTTCGATCTTGGTCTTCCA 60.682 44.000 0.00 0.00 42.66 3.53
101 102 5.661458 TCTATTTCGATCTTGGTCTTCCAC 58.339 41.667 0.00 0.00 44.22 4.02
102 103 3.762407 TTTCGATCTTGGTCTTCCACA 57.238 42.857 0.00 0.00 44.22 4.17
103 104 3.981071 TTCGATCTTGGTCTTCCACAT 57.019 42.857 0.00 0.00 44.22 3.21
104 105 3.251479 TCGATCTTGGTCTTCCACATG 57.749 47.619 0.00 0.00 44.22 3.21
105 106 1.667724 CGATCTTGGTCTTCCACATGC 59.332 52.381 0.00 0.00 44.22 4.06
106 107 2.715046 GATCTTGGTCTTCCACATGCA 58.285 47.619 0.00 0.00 44.22 3.96
107 108 2.189594 TCTTGGTCTTCCACATGCAG 57.810 50.000 0.00 0.00 44.22 4.41
108 109 0.524862 CTTGGTCTTCCACATGCAGC 59.475 55.000 0.00 0.00 44.22 5.25
109 110 0.111061 TTGGTCTTCCACATGCAGCT 59.889 50.000 0.00 0.00 44.22 4.24
110 111 0.983467 TGGTCTTCCACATGCAGCTA 59.017 50.000 0.00 0.00 39.03 3.32
111 112 1.561076 TGGTCTTCCACATGCAGCTAT 59.439 47.619 0.00 0.00 39.03 2.97
112 113 2.025981 TGGTCTTCCACATGCAGCTATT 60.026 45.455 0.00 0.00 39.03 1.73
113 114 3.199727 TGGTCTTCCACATGCAGCTATTA 59.800 43.478 0.00 0.00 39.03 0.98
114 115 3.812053 GGTCTTCCACATGCAGCTATTAG 59.188 47.826 0.00 0.00 0.00 1.73
115 116 4.443457 GGTCTTCCACATGCAGCTATTAGA 60.443 45.833 0.00 0.00 0.00 2.10
116 117 4.509600 GTCTTCCACATGCAGCTATTAGAC 59.490 45.833 0.00 0.00 0.00 2.59
117 118 4.162131 TCTTCCACATGCAGCTATTAGACA 59.838 41.667 0.00 0.00 0.00 3.41
118 119 4.486125 TCCACATGCAGCTATTAGACAA 57.514 40.909 0.00 0.00 0.00 3.18
119 120 5.039920 TCCACATGCAGCTATTAGACAAT 57.960 39.130 0.00 0.00 0.00 2.71
120 121 5.439721 TCCACATGCAGCTATTAGACAATT 58.560 37.500 0.00 0.00 0.00 2.32
121 122 5.887598 TCCACATGCAGCTATTAGACAATTT 59.112 36.000 0.00 0.00 0.00 1.82
122 123 7.053498 TCCACATGCAGCTATTAGACAATTTA 58.947 34.615 0.00 0.00 0.00 1.40
123 124 7.227314 TCCACATGCAGCTATTAGACAATTTAG 59.773 37.037 0.00 0.00 0.00 1.85
124 125 7.227314 CCACATGCAGCTATTAGACAATTTAGA 59.773 37.037 0.00 0.00 0.00 2.10
125 126 8.066595 CACATGCAGCTATTAGACAATTTAGAC 58.933 37.037 0.00 0.00 0.00 2.59
126 127 7.770433 ACATGCAGCTATTAGACAATTTAGACA 59.230 33.333 0.00 0.00 0.00 3.41
127 128 8.781196 CATGCAGCTATTAGACAATTTAGACAT 58.219 33.333 0.00 0.00 0.00 3.06
137 138 7.200434 AGACAATTTAGACATGACCTATGGT 57.800 36.000 0.00 0.00 41.25 3.55
138 139 7.050377 AGACAATTTAGACATGACCTATGGTG 58.950 38.462 0.00 2.18 41.25 4.17
208 209 8.483307 AAAAACATACAAATCATTGGAGATGC 57.517 30.769 0.00 0.00 41.01 3.91
217 218 4.290711 TCATTGGAGATGCTTGAAGTGA 57.709 40.909 0.00 0.00 0.00 3.41
219 220 5.258841 TCATTGGAGATGCTTGAAGTGATT 58.741 37.500 0.00 0.00 0.00 2.57
223 224 5.993055 TGGAGATGCTTGAAGTGATTATGA 58.007 37.500 0.00 0.00 0.00 2.15
280 329 7.872113 AAAGATATGCTCCTTTTCGAGAATT 57.128 32.000 0.00 0.00 30.30 2.17
284 415 9.050601 AGATATGCTCCTTTTCGAGAATTAAAG 57.949 33.333 0.45 0.45 30.30 1.85
285 416 8.738645 ATATGCTCCTTTTCGAGAATTAAAGT 57.261 30.769 5.95 0.00 30.30 2.66
307 442 1.202557 AGAAAACAACGACGTGCCCTA 60.203 47.619 0.00 0.00 0.00 3.53
308 443 1.598601 GAAAACAACGACGTGCCCTAA 59.401 47.619 0.00 0.00 0.00 2.69
309 444 1.666054 AAACAACGACGTGCCCTAAA 58.334 45.000 0.00 0.00 0.00 1.85
310 445 1.886886 AACAACGACGTGCCCTAAAT 58.113 45.000 0.00 0.00 0.00 1.40
311 446 1.886886 ACAACGACGTGCCCTAAATT 58.113 45.000 0.00 0.00 0.00 1.82
314 449 3.231160 CAACGACGTGCCCTAAATTTTC 58.769 45.455 0.00 0.00 0.00 2.29
324 459 6.477688 CGTGCCCTAAATTTTCTTAGTCGATA 59.522 38.462 0.00 0.00 0.00 2.92
386 521 4.651585 GCAGCCGCAAATGACAAA 57.348 50.000 0.00 0.00 38.36 2.83
387 522 3.126729 GCAGCCGCAAATGACAAAT 57.873 47.368 0.00 0.00 38.36 2.32
388 523 0.994263 GCAGCCGCAAATGACAAATC 59.006 50.000 0.00 0.00 38.36 2.17
389 524 1.632422 CAGCCGCAAATGACAAATCC 58.368 50.000 0.00 0.00 0.00 3.01
390 525 0.171007 AGCCGCAAATGACAAATCCG 59.829 50.000 0.00 0.00 0.00 4.18
391 526 0.801836 GCCGCAAATGACAAATCCGG 60.802 55.000 0.00 0.00 37.43 5.14
459 596 4.953269 TCGCACGATTACAACTTTTGATC 58.047 39.130 0.00 0.00 0.00 2.92
471 608 4.489679 ACTTTTGATCGGAGAAAAGTGC 57.510 40.909 21.06 0.00 45.99 4.40
476 613 1.129437 GATCGGAGAAAAGTGCTGTGC 59.871 52.381 0.00 0.00 43.58 4.57
477 614 0.179059 TCGGAGAAAAGTGCTGTGCA 60.179 50.000 0.00 0.00 35.60 4.57
478 615 0.236711 CGGAGAAAAGTGCTGTGCAG 59.763 55.000 0.00 0.00 40.08 4.41
496 637 2.666026 CAGCTTCCCGAAAAGAAAAGC 58.334 47.619 0.00 0.00 42.00 3.51
504 645 2.360801 CCGAAAAGAAAAGCAGGGAACA 59.639 45.455 0.00 0.00 0.00 3.18
547 715 4.921515 CCGTATGGAATCTATTACGGTGTG 59.078 45.833 15.65 0.00 43.60 3.82
606 774 1.672881 CGAGATGAACAATCTTGGGGC 59.327 52.381 0.00 0.00 46.12 5.80
607 775 2.027385 GAGATGAACAATCTTGGGGCC 58.973 52.381 0.00 0.00 46.12 5.80
608 776 0.740737 GATGAACAATCTTGGGGCCG 59.259 55.000 0.00 0.00 32.01 6.13
609 777 0.684153 ATGAACAATCTTGGGGCCGG 60.684 55.000 0.00 0.00 0.00 6.13
620 788 1.906333 GGGGCCGGTGAACAAACAT 60.906 57.895 1.90 0.00 0.00 2.71
712 886 0.616111 AGCTACAGGCCACAGCTAGT 60.616 55.000 20.51 1.66 43.67 2.57
734 908 3.247006 ACCTCGATGAAGCAACGTAAT 57.753 42.857 0.00 0.00 31.79 1.89
736 910 3.186909 CCTCGATGAAGCAACGTAATGA 58.813 45.455 0.00 0.00 31.79 2.57
742 916 4.340894 TGAAGCAACGTAATGAATCAGC 57.659 40.909 0.00 0.00 0.00 4.26
746 922 6.316140 TGAAGCAACGTAATGAATCAGCTATT 59.684 34.615 0.00 0.00 0.00 1.73
759 935 3.076621 TCAGCTATTGCAAACTGGACAG 58.923 45.455 20.72 0.00 42.74 3.51
773 949 1.733360 TGGACAGGTAATAAAACGCGC 59.267 47.619 5.73 0.00 0.00 6.86
793 972 2.333938 CGAACCCGTCTGTCGTGT 59.666 61.111 0.00 0.00 37.94 4.49
809 1003 2.069273 CGTGTGAGAGTCCATTTCCAC 58.931 52.381 0.00 0.00 0.00 4.02
943 1159 1.966451 CCCTCACCACAACGGCTTC 60.966 63.158 0.00 0.00 39.03 3.86
1390 1606 1.211969 GCTGTCGTAGCGTTCCAGA 59.788 57.895 0.00 0.00 43.63 3.86
1622 1847 7.562454 TGCTATGGTAAAGTTTATAGTTGGC 57.438 36.000 0.00 1.58 0.00 4.52
1627 1852 5.646360 TGGTAAAGTTTATAGTTGGCTCTGC 59.354 40.000 0.00 0.00 0.00 4.26
1664 1889 3.584733 ATATGGGAAGAAACAGAGGGC 57.415 47.619 0.00 0.00 0.00 5.19
1819 2048 2.037772 ACCTGAAGCACTCACGATCTTT 59.962 45.455 0.00 0.00 0.00 2.52
1820 2049 3.258372 ACCTGAAGCACTCACGATCTTTA 59.742 43.478 0.00 0.00 0.00 1.85
1821 2050 3.614616 CCTGAAGCACTCACGATCTTTAC 59.385 47.826 0.00 0.00 0.00 2.01
1822 2051 4.237724 CTGAAGCACTCACGATCTTTACA 58.762 43.478 0.00 0.00 0.00 2.41
1823 2052 4.237724 TGAAGCACTCACGATCTTTACAG 58.762 43.478 0.00 0.00 0.00 2.74
1824 2053 4.022329 TGAAGCACTCACGATCTTTACAGA 60.022 41.667 0.00 0.00 0.00 3.41
1825 2054 3.839293 AGCACTCACGATCTTTACAGAC 58.161 45.455 0.00 0.00 0.00 3.51
1826 2055 3.255888 AGCACTCACGATCTTTACAGACA 59.744 43.478 0.00 0.00 0.00 3.41
1827 2056 3.365220 GCACTCACGATCTTTACAGACAC 59.635 47.826 0.00 0.00 0.00 3.67
1828 2057 4.546570 CACTCACGATCTTTACAGACACA 58.453 43.478 0.00 0.00 0.00 3.72
1829 2058 4.982295 CACTCACGATCTTTACAGACACAA 59.018 41.667 0.00 0.00 0.00 3.33
1830 2059 5.117745 CACTCACGATCTTTACAGACACAAG 59.882 44.000 0.00 0.00 0.00 3.16
1831 2060 3.987868 TCACGATCTTTACAGACACAAGC 59.012 43.478 0.00 0.00 0.00 4.01
1832 2061 3.740832 CACGATCTTTACAGACACAAGCA 59.259 43.478 0.00 0.00 0.00 3.91
1833 2062 3.741344 ACGATCTTTACAGACACAAGCAC 59.259 43.478 0.00 0.00 0.00 4.40
1834 2063 3.990469 CGATCTTTACAGACACAAGCACT 59.010 43.478 0.00 0.00 0.00 4.40
1835 2064 4.090642 CGATCTTTACAGACACAAGCACTC 59.909 45.833 0.00 0.00 0.00 3.51
1836 2065 4.400529 TCTTTACAGACACAAGCACTCA 57.599 40.909 0.00 0.00 0.00 3.41
1837 2066 4.119862 TCTTTACAGACACAAGCACTCAC 58.880 43.478 0.00 0.00 0.00 3.51
1838 2067 2.134201 TACAGACACAAGCACTCACG 57.866 50.000 0.00 0.00 0.00 4.35
1841 2070 1.723542 CAGACACAAGCACTCACGATC 59.276 52.381 0.00 0.00 0.00 3.69
1843 2072 2.036475 AGACACAAGCACTCACGATCTT 59.964 45.455 0.00 0.00 0.00 2.40
1845 2074 4.081972 AGACACAAGCACTCACGATCTTAT 60.082 41.667 0.00 0.00 0.00 1.73
1846 2075 5.125578 AGACACAAGCACTCACGATCTTATA 59.874 40.000 0.00 0.00 0.00 0.98
1852 2081 9.015367 ACAAGCACTCACGATCTTATATACTAT 57.985 33.333 0.00 0.00 0.00 2.12
1941 2174 7.043059 GCAATTCGACTTTGTCTTATAGGAGAG 60.043 40.741 8.59 0.00 0.00 3.20
1943 2176 5.194432 TCGACTTTGTCTTATAGGAGAGCT 58.806 41.667 0.00 0.00 0.00 4.09
2027 2261 4.992951 GGAGTTAGTAGACGGCTTTGAAAA 59.007 41.667 0.00 0.00 0.00 2.29
2130 2395 7.722795 AACAACTAACAAATTGCATTTACCC 57.277 32.000 0.00 0.00 0.00 3.69
2131 2396 7.061566 ACAACTAACAAATTGCATTTACCCT 57.938 32.000 0.00 0.00 0.00 4.34
2132 2397 8.184304 ACAACTAACAAATTGCATTTACCCTA 57.816 30.769 0.00 0.00 0.00 3.53
2133 2398 8.643324 ACAACTAACAAATTGCATTTACCCTAA 58.357 29.630 0.00 0.00 0.00 2.69
2134 2399 9.482627 CAACTAACAAATTGCATTTACCCTAAA 57.517 29.630 0.00 0.00 0.00 1.85
2135 2400 9.705290 AACTAACAAATTGCATTTACCCTAAAG 57.295 29.630 0.00 0.00 0.00 1.85
2136 2401 7.817478 ACTAACAAATTGCATTTACCCTAAAGC 59.183 33.333 0.00 0.00 0.00 3.51
2137 2402 5.487433 ACAAATTGCATTTACCCTAAAGCC 58.513 37.500 0.00 0.00 0.00 4.35
2138 2403 4.385358 AATTGCATTTACCCTAAAGCCG 57.615 40.909 0.00 0.00 0.00 5.52
2139 2404 1.099689 TGCATTTACCCTAAAGCCGC 58.900 50.000 0.00 0.00 0.00 6.53
2140 2405 0.028902 GCATTTACCCTAAAGCCGCG 59.971 55.000 0.00 0.00 0.00 6.46
2141 2406 0.028902 CATTTACCCTAAAGCCGCGC 59.971 55.000 0.00 0.00 0.00 6.86
2142 2407 0.107361 ATTTACCCTAAAGCCGCGCT 60.107 50.000 5.56 0.00 42.56 5.92
2154 2419 3.698463 CGCGCTTGGTTCGTCGTT 61.698 61.111 5.56 0.00 0.00 3.85
2155 2420 2.629763 GCGCTTGGTTCGTCGTTT 59.370 55.556 0.00 0.00 0.00 3.60
2156 2421 1.438222 GCGCTTGGTTCGTCGTTTC 60.438 57.895 0.00 0.00 0.00 2.78
2157 2422 1.828331 GCGCTTGGTTCGTCGTTTCT 61.828 55.000 0.00 0.00 0.00 2.52
2158 2423 0.161024 CGCTTGGTTCGTCGTTTCTC 59.839 55.000 0.00 0.00 0.00 2.87
2159 2424 0.511653 GCTTGGTTCGTCGTTTCTCC 59.488 55.000 0.00 0.00 0.00 3.71
2160 2425 0.782384 CTTGGTTCGTCGTTTCTCCG 59.218 55.000 0.00 0.00 0.00 4.63
2161 2426 1.216941 TTGGTTCGTCGTTTCTCCGC 61.217 55.000 0.00 0.00 0.00 5.54
2162 2427 2.378084 GGTTCGTCGTTTCTCCGCC 61.378 63.158 0.00 0.00 0.00 6.13
2163 2428 2.429571 TTCGTCGTTTCTCCGCCG 60.430 61.111 0.00 0.00 0.00 6.46
2164 2429 2.906939 TTCGTCGTTTCTCCGCCGA 61.907 57.895 0.00 0.00 0.00 5.54
2165 2430 2.405061 TTCGTCGTTTCTCCGCCGAA 62.405 55.000 0.00 0.00 31.68 4.30
2166 2431 1.804326 CGTCGTTTCTCCGCCGAAT 60.804 57.895 0.00 0.00 31.68 3.34
2167 2432 1.349259 CGTCGTTTCTCCGCCGAATT 61.349 55.000 0.00 0.00 31.68 2.17
2168 2433 0.794473 GTCGTTTCTCCGCCGAATTT 59.206 50.000 0.00 0.00 31.68 1.82
2169 2434 1.994779 GTCGTTTCTCCGCCGAATTTA 59.005 47.619 0.00 0.00 31.68 1.40
2170 2435 2.606272 GTCGTTTCTCCGCCGAATTTAT 59.394 45.455 0.00 0.00 31.68 1.40
2171 2436 3.063045 GTCGTTTCTCCGCCGAATTTATT 59.937 43.478 0.00 0.00 31.68 1.40
2172 2437 3.685756 TCGTTTCTCCGCCGAATTTATTT 59.314 39.130 0.00 0.00 0.00 1.40
2173 2438 4.154556 TCGTTTCTCCGCCGAATTTATTTT 59.845 37.500 0.00 0.00 0.00 1.82
2174 2439 4.494410 CGTTTCTCCGCCGAATTTATTTTC 59.506 41.667 0.00 0.00 0.00 2.29
2175 2440 4.625972 TTCTCCGCCGAATTTATTTTCC 57.374 40.909 0.00 0.00 0.00 3.13
2176 2441 3.611970 TCTCCGCCGAATTTATTTTCCA 58.388 40.909 0.00 0.00 0.00 3.53
2177 2442 3.375922 TCTCCGCCGAATTTATTTTCCAC 59.624 43.478 0.00 0.00 0.00 4.02
2178 2443 2.424246 TCCGCCGAATTTATTTTCCACC 59.576 45.455 0.00 0.00 0.00 4.61
2179 2444 2.425668 CCGCCGAATTTATTTTCCACCT 59.574 45.455 0.00 0.00 0.00 4.00
2180 2445 3.434637 CGCCGAATTTATTTTCCACCTG 58.565 45.455 0.00 0.00 0.00 4.00
2181 2446 3.119637 CGCCGAATTTATTTTCCACCTGT 60.120 43.478 0.00 0.00 0.00 4.00
2182 2447 4.095185 CGCCGAATTTATTTTCCACCTGTA 59.905 41.667 0.00 0.00 0.00 2.74
2183 2448 5.392165 CGCCGAATTTATTTTCCACCTGTAA 60.392 40.000 0.00 0.00 0.00 2.41
2184 2449 5.803461 GCCGAATTTATTTTCCACCTGTAAC 59.197 40.000 0.00 0.00 0.00 2.50
2185 2450 6.349860 GCCGAATTTATTTTCCACCTGTAACT 60.350 38.462 0.00 0.00 0.00 2.24
2186 2451 7.599171 CCGAATTTATTTTCCACCTGTAACTT 58.401 34.615 0.00 0.00 0.00 2.66
2187 2452 7.753580 CCGAATTTATTTTCCACCTGTAACTTC 59.246 37.037 0.00 0.00 0.00 3.01
2188 2453 8.512138 CGAATTTATTTTCCACCTGTAACTTCT 58.488 33.333 0.00 0.00 0.00 2.85
2192 2457 9.629878 TTTATTTTCCACCTGTAACTTCTTACA 57.370 29.630 0.00 0.00 40.01 2.41
2193 2458 6.930667 TTTTCCACCTGTAACTTCTTACAC 57.069 37.500 0.00 0.00 37.85 2.90
2194 2459 4.612264 TCCACCTGTAACTTCTTACACC 57.388 45.455 0.00 0.00 37.85 4.16
2195 2460 3.325716 TCCACCTGTAACTTCTTACACCC 59.674 47.826 0.00 0.00 37.85 4.61
2196 2461 3.323243 CACCTGTAACTTCTTACACCCG 58.677 50.000 0.00 0.00 37.85 5.28
2197 2462 2.967887 ACCTGTAACTTCTTACACCCGT 59.032 45.455 0.00 0.00 37.85 5.28
2198 2463 4.022068 CACCTGTAACTTCTTACACCCGTA 60.022 45.833 0.00 0.00 37.85 4.02
2199 2464 4.774200 ACCTGTAACTTCTTACACCCGTAT 59.226 41.667 0.00 0.00 37.85 3.06
2200 2465 5.246883 ACCTGTAACTTCTTACACCCGTATT 59.753 40.000 0.00 0.00 37.85 1.89
2201 2466 6.437162 ACCTGTAACTTCTTACACCCGTATTA 59.563 38.462 0.00 0.00 37.85 0.98
2202 2467 7.039082 ACCTGTAACTTCTTACACCCGTATTAA 60.039 37.037 0.00 0.00 37.85 1.40
2203 2468 7.818930 CCTGTAACTTCTTACACCCGTATTAAA 59.181 37.037 0.00 0.00 37.85 1.52
2204 2469 8.532977 TGTAACTTCTTACACCCGTATTAAAC 57.467 34.615 0.00 0.00 37.85 2.01
2205 2470 8.367156 TGTAACTTCTTACACCCGTATTAAACT 58.633 33.333 0.00 0.00 37.85 2.66
2206 2471 7.662604 AACTTCTTACACCCGTATTAAACTG 57.337 36.000 0.00 0.00 0.00 3.16
2207 2472 6.168389 ACTTCTTACACCCGTATTAAACTGG 58.832 40.000 0.00 0.00 38.39 4.00
2208 2473 4.506758 TCTTACACCCGTATTAAACTGGC 58.493 43.478 0.00 0.00 35.96 4.85
2209 2474 2.118313 ACACCCGTATTAAACTGGCC 57.882 50.000 0.00 0.00 35.96 5.36
2210 2475 1.351683 ACACCCGTATTAAACTGGCCA 59.648 47.619 4.71 4.71 35.96 5.36
2211 2476 1.741145 CACCCGTATTAAACTGGCCAC 59.259 52.381 0.00 0.00 35.96 5.01
2212 2477 1.340308 ACCCGTATTAAACTGGCCACC 60.340 52.381 0.00 0.00 35.96 4.61
2213 2478 1.385528 CCGTATTAAACTGGCCACCC 58.614 55.000 0.00 0.00 0.00 4.61
2214 2479 1.011333 CGTATTAAACTGGCCACCCG 58.989 55.000 0.00 0.00 0.00 5.28
2215 2480 1.676615 CGTATTAAACTGGCCACCCGT 60.677 52.381 0.00 0.00 0.00 5.28
2216 2481 2.418471 CGTATTAAACTGGCCACCCGTA 60.418 50.000 0.00 0.00 0.00 4.02
2217 2482 2.883122 ATTAAACTGGCCACCCGTAA 57.117 45.000 0.00 0.00 0.00 3.18
2218 2483 2.653234 TTAAACTGGCCACCCGTAAA 57.347 45.000 0.00 0.00 0.00 2.01
2219 2484 2.653234 TAAACTGGCCACCCGTAAAA 57.347 45.000 0.00 0.00 0.00 1.52
2220 2485 1.777941 AAACTGGCCACCCGTAAAAA 58.222 45.000 0.00 0.00 0.00 1.94
2221 2486 1.034356 AACTGGCCACCCGTAAAAAC 58.966 50.000 0.00 0.00 0.00 2.43
2222 2487 0.824595 ACTGGCCACCCGTAAAAACC 60.825 55.000 0.00 0.00 0.00 3.27
2223 2488 1.858372 CTGGCCACCCGTAAAAACCG 61.858 60.000 0.00 0.00 0.00 4.44
2224 2489 2.628696 GGCCACCCGTAAAAACCGG 61.629 63.158 0.00 0.00 45.07 5.28
2229 2494 2.358492 CCGTAAAAACCGGGCGGA 60.358 61.111 6.32 0.00 41.78 5.54
2230 2495 1.965411 CCGTAAAAACCGGGCGGAA 60.965 57.895 6.32 0.00 41.78 4.30
2231 2496 1.513836 CCGTAAAAACCGGGCGGAAA 61.514 55.000 6.32 0.00 41.78 3.13
2232 2497 0.110101 CGTAAAAACCGGGCGGAAAG 60.110 55.000 6.32 0.00 38.96 2.62
2233 2498 1.237533 GTAAAAACCGGGCGGAAAGA 58.762 50.000 6.32 0.00 38.96 2.52
2234 2499 1.608109 GTAAAAACCGGGCGGAAAGAA 59.392 47.619 6.32 0.00 38.96 2.52
2235 2500 1.112950 AAAAACCGGGCGGAAAGAAA 58.887 45.000 6.32 0.00 38.96 2.52
2236 2501 1.112950 AAAACCGGGCGGAAAGAAAA 58.887 45.000 6.32 0.00 38.96 2.29
2237 2502 0.386476 AAACCGGGCGGAAAGAAAAC 59.614 50.000 6.32 0.00 38.96 2.43
2238 2503 1.788067 AACCGGGCGGAAAGAAAACG 61.788 55.000 6.32 0.00 38.96 3.60
2239 2504 2.559330 CGGGCGGAAAGAAAACGG 59.441 61.111 0.00 0.00 0.00 4.44
2240 2505 1.962306 CGGGCGGAAAGAAAACGGA 60.962 57.895 0.00 0.00 0.00 4.69
2241 2506 1.873863 GGGCGGAAAGAAAACGGAG 59.126 57.895 0.00 0.00 0.00 4.63
2242 2507 1.209383 GGCGGAAAGAAAACGGAGC 59.791 57.895 0.00 0.00 0.00 4.70
2243 2508 1.154469 GCGGAAAGAAAACGGAGCG 60.154 57.895 0.00 0.00 0.00 5.03
2244 2509 1.838568 GCGGAAAGAAAACGGAGCGT 61.839 55.000 0.00 0.00 43.97 5.07
2245 2510 0.110823 CGGAAAGAAAACGGAGCGTG 60.111 55.000 0.00 0.00 39.99 5.34
2246 2511 0.237498 GGAAAGAAAACGGAGCGTGG 59.763 55.000 0.00 0.00 39.99 4.94
2247 2512 0.237498 GAAAGAAAACGGAGCGTGGG 59.763 55.000 0.00 0.00 39.99 4.61
2248 2513 0.179040 AAAGAAAACGGAGCGTGGGA 60.179 50.000 0.00 0.00 39.99 4.37
2249 2514 0.602905 AAGAAAACGGAGCGTGGGAG 60.603 55.000 0.00 0.00 39.99 4.30
2250 2515 2.668550 AAAACGGAGCGTGGGAGC 60.669 61.111 0.00 0.00 39.99 4.70
2258 2523 4.617875 GCGTGGGAGCTGTGTATT 57.382 55.556 0.00 0.00 0.00 1.89
2259 2524 3.752796 GCGTGGGAGCTGTGTATTA 57.247 52.632 0.00 0.00 0.00 0.98
2260 2525 1.571919 GCGTGGGAGCTGTGTATTAG 58.428 55.000 0.00 0.00 0.00 1.73
2261 2526 1.134788 GCGTGGGAGCTGTGTATTAGT 60.135 52.381 0.00 0.00 0.00 2.24
2262 2527 2.677037 GCGTGGGAGCTGTGTATTAGTT 60.677 50.000 0.00 0.00 0.00 2.24
2263 2528 3.596214 CGTGGGAGCTGTGTATTAGTTT 58.404 45.455 0.00 0.00 0.00 2.66
2264 2529 4.000988 CGTGGGAGCTGTGTATTAGTTTT 58.999 43.478 0.00 0.00 0.00 2.43
2265 2530 4.092968 CGTGGGAGCTGTGTATTAGTTTTC 59.907 45.833 0.00 0.00 0.00 2.29
2266 2531 4.395231 GTGGGAGCTGTGTATTAGTTTTCC 59.605 45.833 0.00 0.00 0.00 3.13
2267 2532 4.042311 TGGGAGCTGTGTATTAGTTTTCCA 59.958 41.667 0.00 0.00 0.00 3.53
2268 2533 4.636206 GGGAGCTGTGTATTAGTTTTCCAG 59.364 45.833 0.00 0.00 0.00 3.86
2269 2534 4.636206 GGAGCTGTGTATTAGTTTTCCAGG 59.364 45.833 0.00 0.00 0.00 4.45
2270 2535 4.010349 AGCTGTGTATTAGTTTTCCAGGC 58.990 43.478 0.00 0.00 0.00 4.85
2271 2536 3.181510 GCTGTGTATTAGTTTTCCAGGCG 60.182 47.826 0.00 0.00 0.00 5.52
2272 2537 3.340034 TGTGTATTAGTTTTCCAGGCGG 58.660 45.455 0.00 0.00 0.00 6.13
2273 2538 3.008157 TGTGTATTAGTTTTCCAGGCGGA 59.992 43.478 0.00 0.00 40.60 5.54
2293 2558 3.284449 GCACTGACCGGCCGTTTT 61.284 61.111 26.12 7.77 0.00 2.43
2294 2559 2.841160 GCACTGACCGGCCGTTTTT 61.841 57.895 26.12 4.75 0.00 1.94
2315 2580 5.441709 TTTTCGGATCTAAACAACCAACC 57.558 39.130 0.00 0.00 0.00 3.77
2316 2581 3.773418 TCGGATCTAAACAACCAACCA 57.227 42.857 0.00 0.00 0.00 3.67
2317 2582 4.088056 TCGGATCTAAACAACCAACCAA 57.912 40.909 0.00 0.00 0.00 3.67
2318 2583 4.069304 TCGGATCTAAACAACCAACCAAG 58.931 43.478 0.00 0.00 0.00 3.61
2319 2584 3.365969 CGGATCTAAACAACCAACCAAGC 60.366 47.826 0.00 0.00 0.00 4.01
2320 2585 3.365969 GGATCTAAACAACCAACCAAGCG 60.366 47.826 0.00 0.00 0.00 4.68
2321 2586 1.950909 TCTAAACAACCAACCAAGCGG 59.049 47.619 0.00 0.00 38.77 5.52
2322 2587 0.386113 TAAACAACCAACCAAGCGGC 59.614 50.000 0.00 0.00 34.57 6.53
2323 2588 1.326951 AAACAACCAACCAAGCGGCT 61.327 50.000 0.00 0.00 34.57 5.52
2324 2589 2.015227 AACAACCAACCAAGCGGCTG 62.015 55.000 1.81 0.00 34.57 4.85
2325 2590 2.123897 AACCAACCAAGCGGCTGT 60.124 55.556 1.81 0.00 34.57 4.40
2326 2591 1.756561 AACCAACCAAGCGGCTGTT 60.757 52.632 1.81 0.89 34.57 3.16
2327 2592 1.326951 AACCAACCAAGCGGCTGTTT 61.327 50.000 1.81 0.00 34.57 2.83
2328 2593 1.007387 CCAACCAAGCGGCTGTTTC 60.007 57.895 1.81 0.00 34.57 2.78
2329 2594 1.370414 CAACCAAGCGGCTGTTTCG 60.370 57.895 1.81 0.00 34.57 3.46
2330 2595 1.525077 AACCAAGCGGCTGTTTCGA 60.525 52.632 1.81 0.00 34.57 3.71
2331 2596 1.098712 AACCAAGCGGCTGTTTCGAA 61.099 50.000 1.81 0.00 34.57 3.71
2332 2597 1.098712 ACCAAGCGGCTGTTTCGAAA 61.099 50.000 6.47 6.47 34.57 3.46
2333 2598 0.030101 CCAAGCGGCTGTTTCGAAAA 59.970 50.000 13.10 2.56 0.00 2.29
2334 2599 1.398595 CAAGCGGCTGTTTCGAAAAG 58.601 50.000 13.10 12.88 0.00 2.27
2335 2600 0.317854 AAGCGGCTGTTTCGAAAAGC 60.318 50.000 24.54 24.54 36.17 3.51
2336 2601 1.008995 GCGGCTGTTTCGAAAAGCA 60.009 52.632 29.17 18.50 38.73 3.91
2337 2602 1.268778 GCGGCTGTTTCGAAAAGCAC 61.269 55.000 29.17 21.99 38.73 4.40
2338 2603 0.991770 CGGCTGTTTCGAAAAGCACG 60.992 55.000 29.17 26.01 38.73 5.34
2339 2604 0.028902 GGCTGTTTCGAAAAGCACGT 59.971 50.000 29.17 0.00 38.73 4.49
2340 2605 1.262151 GGCTGTTTCGAAAAGCACGTA 59.738 47.619 29.17 3.31 38.73 3.57
2341 2606 2.095919 GGCTGTTTCGAAAAGCACGTAT 60.096 45.455 29.17 0.00 38.73 3.06
2342 2607 3.551551 GCTGTTTCGAAAAGCACGTATT 58.448 40.909 26.19 0.00 36.91 1.89
2343 2608 3.357823 GCTGTTTCGAAAAGCACGTATTG 59.642 43.478 26.19 8.55 36.91 1.90
2344 2609 4.768145 CTGTTTCGAAAAGCACGTATTGA 58.232 39.130 13.10 0.00 0.00 2.57
2345 2610 5.351233 TGTTTCGAAAAGCACGTATTGAT 57.649 34.783 13.10 0.00 0.00 2.57
2346 2611 5.753744 TGTTTCGAAAAGCACGTATTGATT 58.246 33.333 13.10 0.00 34.42 2.57
2347 2612 6.202937 TGTTTCGAAAAGCACGTATTGATTT 58.797 32.000 13.10 0.00 45.90 2.17
2352 2617 3.757745 AAGCACGTATTGATTTTCCGG 57.242 42.857 0.00 0.00 25.28 5.14
2353 2618 1.400494 AGCACGTATTGATTTTCCGGC 59.600 47.619 0.00 0.00 0.00 6.13
2354 2619 1.400494 GCACGTATTGATTTTCCGGCT 59.600 47.619 0.00 0.00 0.00 5.52
2355 2620 2.791158 GCACGTATTGATTTTCCGGCTG 60.791 50.000 0.00 0.00 0.00 4.85
2356 2621 2.014128 ACGTATTGATTTTCCGGCTGG 58.986 47.619 4.71 4.71 0.00 4.85
2357 2622 2.285083 CGTATTGATTTTCCGGCTGGA 58.715 47.619 11.27 11.27 44.61 3.86
2358 2623 2.878406 CGTATTGATTTTCCGGCTGGAT 59.122 45.455 16.96 0.00 45.91 3.41
2359 2624 3.303990 CGTATTGATTTTCCGGCTGGATG 60.304 47.826 16.96 0.00 45.91 3.51
2360 2625 2.214376 TTGATTTTCCGGCTGGATGT 57.786 45.000 16.96 4.17 45.91 3.06
2361 2626 2.214376 TGATTTTCCGGCTGGATGTT 57.786 45.000 16.96 2.39 45.91 2.71
2362 2627 2.524306 TGATTTTCCGGCTGGATGTTT 58.476 42.857 16.96 0.35 45.91 2.83
2363 2628 2.896685 TGATTTTCCGGCTGGATGTTTT 59.103 40.909 16.96 0.00 45.91 2.43
2364 2629 4.082845 TGATTTTCCGGCTGGATGTTTTA 58.917 39.130 16.96 0.00 45.91 1.52
2365 2630 3.926821 TTTTCCGGCTGGATGTTTTAC 57.073 42.857 16.96 0.00 45.91 2.01
2366 2631 1.444836 TTCCGGCTGGATGTTTTACG 58.555 50.000 16.96 0.00 45.91 3.18
2367 2632 1.022451 TCCGGCTGGATGTTTTACGC 61.022 55.000 11.27 0.00 40.17 4.42
2368 2633 1.427819 CGGCTGGATGTTTTACGCC 59.572 57.895 0.00 0.00 0.00 5.68
2369 2634 1.024579 CGGCTGGATGTTTTACGCCT 61.025 55.000 0.00 0.00 35.46 5.52
2370 2635 0.451783 GGCTGGATGTTTTACGCCTG 59.548 55.000 0.00 0.00 34.80 4.85
2371 2636 1.165270 GCTGGATGTTTTACGCCTGT 58.835 50.000 0.00 0.00 0.00 4.00
2372 2637 2.352388 GCTGGATGTTTTACGCCTGTA 58.648 47.619 0.00 0.00 0.00 2.74
2373 2638 2.745281 GCTGGATGTTTTACGCCTGTAA 59.255 45.455 0.00 0.00 38.77 2.41
2374 2639 3.377172 GCTGGATGTTTTACGCCTGTAAT 59.623 43.478 0.00 0.00 40.14 1.89
2375 2640 4.495844 GCTGGATGTTTTACGCCTGTAATC 60.496 45.833 0.00 0.00 40.14 1.75
2376 2641 3.619483 TGGATGTTTTACGCCTGTAATCG 59.381 43.478 0.00 0.00 40.14 3.34
2377 2642 3.619929 GGATGTTTTACGCCTGTAATCGT 59.380 43.478 0.00 0.00 40.14 3.73
2378 2643 4.260091 GGATGTTTTACGCCTGTAATCGTC 60.260 45.833 0.00 0.00 40.14 4.20
2379 2644 2.995258 TGTTTTACGCCTGTAATCGTCC 59.005 45.455 0.00 0.00 40.14 4.79
2380 2645 2.298411 TTTACGCCTGTAATCGTCCC 57.702 50.000 0.00 0.00 40.14 4.46
2381 2646 1.477553 TTACGCCTGTAATCGTCCCT 58.522 50.000 0.00 0.00 39.79 4.20
2382 2647 0.742505 TACGCCTGTAATCGTCCCTG 59.257 55.000 0.00 0.00 39.79 4.45
2383 2648 0.968901 ACGCCTGTAATCGTCCCTGA 60.969 55.000 0.00 0.00 33.09 3.86
2384 2649 0.174845 CGCCTGTAATCGTCCCTGAA 59.825 55.000 0.00 0.00 0.00 3.02
2385 2650 1.404986 CGCCTGTAATCGTCCCTGAAA 60.405 52.381 0.00 0.00 0.00 2.69
2386 2651 2.007608 GCCTGTAATCGTCCCTGAAAC 58.992 52.381 0.00 0.00 0.00 2.78
2387 2652 2.268298 CCTGTAATCGTCCCTGAAACG 58.732 52.381 0.00 0.00 41.39 3.60
2393 2658 2.074547 TCGTCCCTGAAACGACAATC 57.925 50.000 0.00 0.00 43.65 2.67
2394 2659 1.076332 CGTCCCTGAAACGACAATCC 58.924 55.000 0.00 0.00 42.62 3.01
2395 2660 1.606994 CGTCCCTGAAACGACAATCCA 60.607 52.381 0.00 0.00 42.62 3.41
2396 2661 2.500229 GTCCCTGAAACGACAATCCAA 58.500 47.619 0.00 0.00 0.00 3.53
2397 2662 3.081804 GTCCCTGAAACGACAATCCAAT 58.918 45.455 0.00 0.00 0.00 3.16
2398 2663 3.127030 GTCCCTGAAACGACAATCCAATC 59.873 47.826 0.00 0.00 0.00 2.67
2399 2664 3.081061 CCCTGAAACGACAATCCAATCA 58.919 45.455 0.00 0.00 0.00 2.57
2400 2665 3.119849 CCCTGAAACGACAATCCAATCAC 60.120 47.826 0.00 0.00 0.00 3.06
2401 2666 3.424829 CCTGAAACGACAATCCAATCACG 60.425 47.826 0.00 0.00 0.00 4.35
2402 2667 2.095969 TGAAACGACAATCCAATCACGC 60.096 45.455 0.00 0.00 0.00 5.34
2403 2668 1.518325 AACGACAATCCAATCACGCA 58.482 45.000 0.00 0.00 0.00 5.24
2404 2669 0.796312 ACGACAATCCAATCACGCAC 59.204 50.000 0.00 0.00 0.00 5.34
2405 2670 0.795698 CGACAATCCAATCACGCACA 59.204 50.000 0.00 0.00 0.00 4.57
2406 2671 1.196581 CGACAATCCAATCACGCACAA 59.803 47.619 0.00 0.00 0.00 3.33
2407 2672 2.350293 CGACAATCCAATCACGCACAAA 60.350 45.455 0.00 0.00 0.00 2.83
2408 2673 3.670359 CGACAATCCAATCACGCACAAAT 60.670 43.478 0.00 0.00 0.00 2.32
2409 2674 4.236935 GACAATCCAATCACGCACAAATT 58.763 39.130 0.00 0.00 0.00 1.82
2410 2675 3.989167 ACAATCCAATCACGCACAAATTG 59.011 39.130 0.00 0.00 0.00 2.32
2449 2714 6.097356 TGTAGTTAACGTCAATCCAGATGAC 58.903 40.000 0.00 0.00 42.94 3.06
2543 2808 8.477256 TCCCCTTTATTTGCATTATTCTCAAAG 58.523 33.333 0.00 0.00 33.83 2.77
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.082733 GCCAATAGACCCAGAGACAAAAAC 60.083 45.833 0.00 0.00 0.00 2.43
1 2 4.079253 GCCAATAGACCCAGAGACAAAAA 58.921 43.478 0.00 0.00 0.00 1.94
2 3 3.330701 AGCCAATAGACCCAGAGACAAAA 59.669 43.478 0.00 0.00 0.00 2.44
3 4 2.912956 AGCCAATAGACCCAGAGACAAA 59.087 45.455 0.00 0.00 0.00 2.83
4 5 2.501723 GAGCCAATAGACCCAGAGACAA 59.498 50.000 0.00 0.00 0.00 3.18
5 6 2.111384 GAGCCAATAGACCCAGAGACA 58.889 52.381 0.00 0.00 0.00 3.41
6 7 2.364002 GAGAGCCAATAGACCCAGAGAC 59.636 54.545 0.00 0.00 0.00 3.36
7 8 2.672098 GAGAGCCAATAGACCCAGAGA 58.328 52.381 0.00 0.00 0.00 3.10
8 9 1.691434 GGAGAGCCAATAGACCCAGAG 59.309 57.143 0.00 0.00 0.00 3.35
9 10 1.292242 AGGAGAGCCAATAGACCCAGA 59.708 52.381 0.00 0.00 36.29 3.86
10 11 1.799933 AGGAGAGCCAATAGACCCAG 58.200 55.000 0.00 0.00 36.29 4.45
11 12 3.414759 TTAGGAGAGCCAATAGACCCA 57.585 47.619 0.00 0.00 36.29 4.51
12 13 4.164204 AGATTAGGAGAGCCAATAGACCC 58.836 47.826 0.00 0.00 36.29 4.46
13 14 5.512232 CCAAGATTAGGAGAGCCAATAGACC 60.512 48.000 0.00 0.00 36.29 3.85
14 15 5.071115 ACCAAGATTAGGAGAGCCAATAGAC 59.929 44.000 0.00 0.00 36.29 2.59
15 16 5.219739 ACCAAGATTAGGAGAGCCAATAGA 58.780 41.667 0.00 0.00 36.29 1.98
16 17 5.306678 AGACCAAGATTAGGAGAGCCAATAG 59.693 44.000 0.00 0.00 36.29 1.73
17 18 5.219739 AGACCAAGATTAGGAGAGCCAATA 58.780 41.667 0.00 0.00 36.29 1.90
18 19 4.043596 AGACCAAGATTAGGAGAGCCAAT 58.956 43.478 0.00 0.00 36.29 3.16
19 20 3.454858 AGACCAAGATTAGGAGAGCCAA 58.545 45.455 0.00 0.00 36.29 4.52
20 21 3.121929 AGACCAAGATTAGGAGAGCCA 57.878 47.619 0.00 0.00 36.29 4.75
21 22 4.195416 CAAAGACCAAGATTAGGAGAGCC 58.805 47.826 0.00 0.00 0.00 4.70
22 23 4.837972 ACAAAGACCAAGATTAGGAGAGC 58.162 43.478 0.00 0.00 0.00 4.09
23 24 6.148480 CACAACAAAGACCAAGATTAGGAGAG 59.852 42.308 0.00 0.00 0.00 3.20
24 25 5.997746 CACAACAAAGACCAAGATTAGGAGA 59.002 40.000 0.00 0.00 0.00 3.71
25 26 5.765182 ACACAACAAAGACCAAGATTAGGAG 59.235 40.000 0.00 0.00 0.00 3.69
26 27 5.530915 CACACAACAAAGACCAAGATTAGGA 59.469 40.000 0.00 0.00 0.00 2.94
27 28 5.299279 ACACACAACAAAGACCAAGATTAGG 59.701 40.000 0.00 0.00 0.00 2.69
28 29 6.377327 ACACACAACAAAGACCAAGATTAG 57.623 37.500 0.00 0.00 0.00 1.73
29 30 6.767524 AACACACAACAAAGACCAAGATTA 57.232 33.333 0.00 0.00 0.00 1.75
30 31 5.659440 AACACACAACAAAGACCAAGATT 57.341 34.783 0.00 0.00 0.00 2.40
31 32 5.047377 ACAAACACACAACAAAGACCAAGAT 60.047 36.000 0.00 0.00 0.00 2.40
32 33 4.279671 ACAAACACACAACAAAGACCAAGA 59.720 37.500 0.00 0.00 0.00 3.02
33 34 4.555262 ACAAACACACAACAAAGACCAAG 58.445 39.130 0.00 0.00 0.00 3.61
34 35 4.592485 ACAAACACACAACAAAGACCAA 57.408 36.364 0.00 0.00 0.00 3.67
35 36 4.592485 AACAAACACACAACAAAGACCA 57.408 36.364 0.00 0.00 0.00 4.02
36 37 5.915812 AAAACAAACACACAACAAAGACC 57.084 34.783 0.00 0.00 0.00 3.85
37 38 6.710611 ACAAAAACAAACACACAACAAAGAC 58.289 32.000 0.00 0.00 0.00 3.01
38 39 6.018669 GGACAAAAACAAACACACAACAAAGA 60.019 34.615 0.00 0.00 0.00 2.52
39 40 6.132724 GGACAAAAACAAACACACAACAAAG 58.867 36.000 0.00 0.00 0.00 2.77
40 41 5.007724 GGGACAAAAACAAACACACAACAAA 59.992 36.000 0.00 0.00 0.00 2.83
41 42 4.511826 GGGACAAAAACAAACACACAACAA 59.488 37.500 0.00 0.00 0.00 2.83
42 43 4.058817 GGGACAAAAACAAACACACAACA 58.941 39.130 0.00 0.00 0.00 3.33
43 44 3.433957 GGGGACAAAAACAAACACACAAC 59.566 43.478 0.00 0.00 0.00 3.32
44 45 3.665190 GGGGACAAAAACAAACACACAA 58.335 40.909 0.00 0.00 0.00 3.33
45 46 2.352814 CGGGGACAAAAACAAACACACA 60.353 45.455 0.00 0.00 0.00 3.72
46 47 2.263945 CGGGGACAAAAACAAACACAC 58.736 47.619 0.00 0.00 0.00 3.82
47 48 1.204941 CCGGGGACAAAAACAAACACA 59.795 47.619 0.00 0.00 0.00 3.72
48 49 1.471851 CCCGGGGACAAAAACAAACAC 60.472 52.381 14.71 0.00 0.00 3.32
49 50 0.824759 CCCGGGGACAAAAACAAACA 59.175 50.000 14.71 0.00 0.00 2.83
50 51 0.825410 ACCCGGGGACAAAAACAAAC 59.175 50.000 27.92 0.00 0.00 2.93
51 52 1.112950 GACCCGGGGACAAAAACAAA 58.887 50.000 27.92 0.00 0.00 2.83
52 53 0.259356 AGACCCGGGGACAAAAACAA 59.741 50.000 27.92 0.00 0.00 2.83
53 54 1.138568 TAGACCCGGGGACAAAAACA 58.861 50.000 27.92 0.00 0.00 2.83
54 55 1.072806 AGTAGACCCGGGGACAAAAAC 59.927 52.381 27.92 12.47 0.00 2.43
55 56 1.072648 CAGTAGACCCGGGGACAAAAA 59.927 52.381 27.92 0.00 0.00 1.94
56 57 0.688487 CAGTAGACCCGGGGACAAAA 59.312 55.000 27.92 5.57 0.00 2.44
57 58 1.196104 CCAGTAGACCCGGGGACAAA 61.196 60.000 27.92 8.10 0.00 2.83
58 59 1.611261 CCAGTAGACCCGGGGACAA 60.611 63.158 27.92 3.89 0.00 3.18
59 60 2.038329 CCAGTAGACCCGGGGACA 59.962 66.667 27.92 5.63 0.00 4.02
60 61 3.468140 GCCAGTAGACCCGGGGAC 61.468 72.222 27.92 19.48 0.00 4.46
61 62 3.674050 GAGCCAGTAGACCCGGGGA 62.674 68.421 27.92 6.69 0.00 4.81
62 63 2.294170 TAGAGCCAGTAGACCCGGGG 62.294 65.000 27.92 12.73 0.00 5.73
63 64 0.178958 ATAGAGCCAGTAGACCCGGG 60.179 60.000 22.25 22.25 0.00 5.73
64 65 1.705873 AATAGAGCCAGTAGACCCGG 58.294 55.000 0.00 0.00 0.00 5.73
65 66 2.287668 CGAAATAGAGCCAGTAGACCCG 60.288 54.545 0.00 0.00 0.00 5.28
66 67 2.957006 TCGAAATAGAGCCAGTAGACCC 59.043 50.000 0.00 0.00 0.00 4.46
67 68 4.521256 AGATCGAAATAGAGCCAGTAGACC 59.479 45.833 0.00 0.00 0.00 3.85
68 69 5.699097 AGATCGAAATAGAGCCAGTAGAC 57.301 43.478 0.00 0.00 0.00 2.59
69 70 5.010112 CCAAGATCGAAATAGAGCCAGTAGA 59.990 44.000 0.00 0.00 0.00 2.59
70 71 5.221342 ACCAAGATCGAAATAGAGCCAGTAG 60.221 44.000 0.00 0.00 0.00 2.57
71 72 4.649674 ACCAAGATCGAAATAGAGCCAGTA 59.350 41.667 0.00 0.00 0.00 2.74
72 73 3.452627 ACCAAGATCGAAATAGAGCCAGT 59.547 43.478 0.00 0.00 0.00 4.00
73 74 4.054671 GACCAAGATCGAAATAGAGCCAG 58.945 47.826 0.00 0.00 0.00 4.85
74 75 3.706594 AGACCAAGATCGAAATAGAGCCA 59.293 43.478 0.00 0.00 0.00 4.75
75 76 4.329462 AGACCAAGATCGAAATAGAGCC 57.671 45.455 0.00 0.00 0.00 4.70
76 77 4.747605 GGAAGACCAAGATCGAAATAGAGC 59.252 45.833 0.00 0.00 35.97 4.09
77 78 5.907207 TGGAAGACCAAGATCGAAATAGAG 58.093 41.667 0.00 0.00 43.91 2.43
78 79 5.932619 TGGAAGACCAAGATCGAAATAGA 57.067 39.130 0.00 0.00 43.91 1.98
91 92 0.983467 TAGCTGCATGTGGAAGACCA 59.017 50.000 1.02 0.00 44.76 4.02
92 93 2.338577 ATAGCTGCATGTGGAAGACC 57.661 50.000 1.02 0.00 0.00 3.85
93 94 4.509600 GTCTAATAGCTGCATGTGGAAGAC 59.490 45.833 1.02 1.95 0.00 3.01
94 95 4.162131 TGTCTAATAGCTGCATGTGGAAGA 59.838 41.667 1.02 0.00 0.00 2.87
95 96 4.445453 TGTCTAATAGCTGCATGTGGAAG 58.555 43.478 1.02 0.00 0.00 3.46
96 97 4.486125 TGTCTAATAGCTGCATGTGGAA 57.514 40.909 1.02 0.00 0.00 3.53
97 98 4.486125 TTGTCTAATAGCTGCATGTGGA 57.514 40.909 1.02 0.00 0.00 4.02
98 99 5.762825 AATTGTCTAATAGCTGCATGTGG 57.237 39.130 1.02 0.00 0.00 4.17
99 100 8.066595 GTCTAAATTGTCTAATAGCTGCATGTG 58.933 37.037 1.02 0.00 0.00 3.21
100 101 7.770433 TGTCTAAATTGTCTAATAGCTGCATGT 59.230 33.333 1.02 0.00 0.00 3.21
101 102 8.146479 TGTCTAAATTGTCTAATAGCTGCATG 57.854 34.615 1.02 0.00 0.00 4.06
102 103 8.781196 CATGTCTAAATTGTCTAATAGCTGCAT 58.219 33.333 1.02 0.00 0.00 3.96
103 104 7.986889 TCATGTCTAAATTGTCTAATAGCTGCA 59.013 33.333 1.02 0.00 0.00 4.41
104 105 8.279103 GTCATGTCTAAATTGTCTAATAGCTGC 58.721 37.037 0.00 0.00 0.00 5.25
105 106 8.768955 GGTCATGTCTAAATTGTCTAATAGCTG 58.231 37.037 0.00 0.00 0.00 4.24
106 107 8.709308 AGGTCATGTCTAAATTGTCTAATAGCT 58.291 33.333 0.00 0.00 0.00 3.32
107 108 8.894768 AGGTCATGTCTAAATTGTCTAATAGC 57.105 34.615 0.00 0.00 0.00 2.97
110 111 9.784531 CCATAGGTCATGTCTAAATTGTCTAAT 57.215 33.333 0.00 0.00 32.21 1.73
111 112 8.768397 ACCATAGGTCATGTCTAAATTGTCTAA 58.232 33.333 0.00 0.00 32.21 2.10
112 113 8.204160 CACCATAGGTCATGTCTAAATTGTCTA 58.796 37.037 0.00 0.00 31.02 2.59
113 114 7.050377 CACCATAGGTCATGTCTAAATTGTCT 58.950 38.462 0.00 0.00 31.02 3.41
114 115 6.260936 CCACCATAGGTCATGTCTAAATTGTC 59.739 42.308 0.00 0.00 31.02 3.18
115 116 6.122277 CCACCATAGGTCATGTCTAAATTGT 58.878 40.000 0.00 0.00 31.02 2.71
116 117 6.038603 CACCACCATAGGTCATGTCTAAATTG 59.961 42.308 0.00 0.00 40.77 2.32
117 118 6.122277 CACCACCATAGGTCATGTCTAAATT 58.878 40.000 0.00 0.00 40.77 1.82
118 119 5.191722 ACACCACCATAGGTCATGTCTAAAT 59.808 40.000 0.00 0.00 40.77 1.40
119 120 4.534500 ACACCACCATAGGTCATGTCTAAA 59.466 41.667 0.00 0.00 40.77 1.85
120 121 4.101114 ACACCACCATAGGTCATGTCTAA 58.899 43.478 0.00 0.00 40.77 2.10
121 122 3.719871 ACACCACCATAGGTCATGTCTA 58.280 45.455 0.00 0.00 40.77 2.59
122 123 2.551270 ACACCACCATAGGTCATGTCT 58.449 47.619 0.00 0.00 40.77 3.41
123 124 4.100963 TCATACACCACCATAGGTCATGTC 59.899 45.833 5.39 0.00 40.77 3.06
124 125 4.037222 TCATACACCACCATAGGTCATGT 58.963 43.478 6.96 6.96 40.77 3.21
125 126 4.687901 TCATACACCACCATAGGTCATG 57.312 45.455 0.00 0.00 40.77 3.07
126 127 7.574021 ATTATCATACACCACCATAGGTCAT 57.426 36.000 0.00 0.00 40.77 3.06
127 128 7.387265 AATTATCATACACCACCATAGGTCA 57.613 36.000 0.00 0.00 40.77 4.02
137 138 8.839343 CATCAACTAGCAAATTATCATACACCA 58.161 33.333 0.00 0.00 0.00 4.17
138 139 9.056005 TCATCAACTAGCAAATTATCATACACC 57.944 33.333 0.00 0.00 0.00 4.16
192 193 5.805486 CACTTCAAGCATCTCCAATGATTTG 59.195 40.000 0.00 0.00 0.00 2.32
196 197 4.290711 TCACTTCAAGCATCTCCAATGA 57.709 40.909 0.00 0.00 0.00 2.57
264 313 8.252964 TCTTACTTTAATTCTCGAAAAGGAGC 57.747 34.615 10.42 0.00 35.09 4.70
280 329 5.491973 GCACGTCGTTGTTTTCTTACTTTA 58.508 37.500 0.00 0.00 0.00 1.85
284 415 2.600556 GGGCACGTCGTTGTTTTCTTAC 60.601 50.000 0.00 0.00 0.00 2.34
285 416 1.598601 GGGCACGTCGTTGTTTTCTTA 59.401 47.619 0.00 0.00 0.00 2.10
314 449 7.094720 ACGGGAACTGATTCTATATCGACTAAG 60.095 40.741 0.00 0.00 38.67 2.18
324 459 2.032620 AGCGACGGGAACTGATTCTAT 58.967 47.619 0.00 0.00 38.67 1.98
370 505 1.632422 GGATTTGTCATTTGCGGCTG 58.368 50.000 0.00 0.00 0.00 4.85
374 509 0.801836 GGCCGGATTTGTCATTTGCG 60.802 55.000 5.05 0.00 0.00 4.85
389 524 8.112054 GTACTTGAGTATATATCGGAGGGCCG 62.112 50.000 0.00 0.00 44.81 6.13
390 525 4.024670 ACTTGAGTATATATCGGAGGGCC 58.975 47.826 0.00 0.00 0.00 5.80
391 526 5.887035 AGTACTTGAGTATATATCGGAGGGC 59.113 44.000 0.00 0.00 32.54 5.19
425 562 1.658994 TCGTGCGAGAACAACCTTTT 58.341 45.000 0.00 0.00 0.00 2.27
426 563 1.878953 ATCGTGCGAGAACAACCTTT 58.121 45.000 0.00 0.00 0.00 3.11
459 596 0.236711 CTGCACAGCACTTTTCTCCG 59.763 55.000 0.00 0.00 33.79 4.63
471 608 0.239347 CTTTTCGGGAAGCTGCACAG 59.761 55.000 1.02 0.00 0.00 3.66
476 613 2.034558 TGCTTTTCTTTTCGGGAAGCTG 59.965 45.455 7.74 0.00 42.30 4.24
477 614 2.294512 CTGCTTTTCTTTTCGGGAAGCT 59.705 45.455 7.74 0.00 42.30 3.74
478 615 2.608016 CCTGCTTTTCTTTTCGGGAAGC 60.608 50.000 0.00 0.00 42.19 3.86
479 616 2.029918 CCCTGCTTTTCTTTTCGGGAAG 60.030 50.000 0.00 0.00 31.85 3.46
496 637 5.882557 AGCACACTATATCTTTTGTTCCCTG 59.117 40.000 0.00 0.00 0.00 4.45
504 645 5.918608 ACGGATGAGCACACTATATCTTTT 58.081 37.500 0.00 0.00 0.00 2.27
544 712 2.960384 TGTCCTTCTAGACGTTTCCACA 59.040 45.455 0.00 0.00 39.77 4.17
547 715 2.298163 TGGTGTCCTTCTAGACGTTTCC 59.702 50.000 0.00 0.00 39.77 3.13
606 774 2.981400 GGTGTATGTTTGTTCACCGG 57.019 50.000 0.00 0.00 40.36 5.28
609 777 6.831769 CATACTCTGGTGTATGTTTGTTCAC 58.168 40.000 12.08 0.00 42.67 3.18
620 788 3.103742 TGCCATGACATACTCTGGTGTA 58.896 45.455 0.00 0.00 0.00 2.90
630 798 5.798125 TTTTTCTGGTTTGCCATGACATA 57.202 34.783 0.00 0.00 45.05 2.29
712 886 2.736144 ACGTTGCTTCATCGAGGTAA 57.264 45.000 0.00 0.00 31.97 2.85
734 908 4.156556 GTCCAGTTTGCAATAGCTGATTCA 59.843 41.667 20.63 5.81 42.74 2.57
736 910 4.081406 TGTCCAGTTTGCAATAGCTGATT 58.919 39.130 20.63 0.00 42.74 2.57
742 916 7.624360 TTATTACCTGTCCAGTTTGCAATAG 57.376 36.000 0.00 0.00 0.00 1.73
746 922 5.278071 CGTTTTATTACCTGTCCAGTTTGCA 60.278 40.000 0.00 0.00 0.00 4.08
759 935 4.273622 GCCGCGCGTTTTATTACC 57.726 55.556 29.95 1.16 0.00 2.85
793 972 0.991920 GGGGTGGAAATGGACTCTCA 59.008 55.000 0.00 0.00 0.00 3.27
1269 1485 1.741770 GTCGGCGAAGTTGAGGCAT 60.742 57.895 12.92 0.00 0.00 4.40
1587 1812 1.299468 CCATAGCAGCGTCTCGACC 60.299 63.158 0.00 0.00 0.00 4.79
1591 1816 3.166489 ACTTTACCATAGCAGCGTCTC 57.834 47.619 0.00 0.00 0.00 3.36
1598 1823 7.343357 AGCCAACTATAAACTTTACCATAGCA 58.657 34.615 0.00 0.00 0.00 3.49
1622 1847 0.321122 GGTGGGACAGAAGTGCAGAG 60.321 60.000 0.00 0.00 41.80 3.35
1627 1852 3.696051 CCATATTTGGTGGGACAGAAGTG 59.304 47.826 0.00 0.00 41.80 3.16
1664 1889 8.301720 CACATGACCATATGAGGGAAAATATTG 58.698 37.037 3.65 0.00 0.00 1.90
1778 2004 9.967451 TTCAGGTCCACAATAATTGAAGTATTA 57.033 29.630 0.00 0.00 0.00 0.98
1779 2005 8.877864 TTCAGGTCCACAATAATTGAAGTATT 57.122 30.769 0.00 0.00 0.00 1.89
1780 2006 7.067494 GCTTCAGGTCCACAATAATTGAAGTAT 59.933 37.037 12.35 0.00 41.09 2.12
1819 2048 1.679153 TCGTGAGTGCTTGTGTCTGTA 59.321 47.619 0.00 0.00 0.00 2.74
1820 2049 0.459899 TCGTGAGTGCTTGTGTCTGT 59.540 50.000 0.00 0.00 0.00 3.41
1821 2050 1.723542 GATCGTGAGTGCTTGTGTCTG 59.276 52.381 0.00 0.00 0.00 3.51
1822 2051 1.615883 AGATCGTGAGTGCTTGTGTCT 59.384 47.619 0.00 0.00 0.00 3.41
1823 2052 2.071688 AGATCGTGAGTGCTTGTGTC 57.928 50.000 0.00 0.00 0.00 3.67
1824 2053 2.533266 AAGATCGTGAGTGCTTGTGT 57.467 45.000 0.00 0.00 0.00 3.72
1825 2054 7.142021 AGTATATAAGATCGTGAGTGCTTGTG 58.858 38.462 0.00 0.00 0.00 3.33
1826 2055 7.278461 AGTATATAAGATCGTGAGTGCTTGT 57.722 36.000 0.00 0.00 0.00 3.16
1827 2056 9.847706 AATAGTATATAAGATCGTGAGTGCTTG 57.152 33.333 0.00 0.00 0.00 4.01
1866 2095 8.594881 AATGTCTTTTTCTAGTCTGTACTGTG 57.405 34.615 0.00 0.00 36.36 3.66
1879 2108 9.280174 TGGTCTCGTATTTTAATGTCTTTTTCT 57.720 29.630 0.00 0.00 0.00 2.52
1898 2131 8.162880 GTCGAATTGCTATAAAATATGGTCTCG 58.837 37.037 0.00 0.00 0.00 4.04
1899 2132 9.209175 AGTCGAATTGCTATAAAATATGGTCTC 57.791 33.333 0.00 0.00 0.00 3.36
1914 2147 6.640518 TCCTATAAGACAAAGTCGAATTGCT 58.359 36.000 0.00 1.71 37.67 3.91
2027 2261 8.177663 CGAATAGTACATGCAGTTGAATTTCTT 58.822 33.333 0.00 0.00 0.00 2.52
2091 2325 8.449251 TGTTAGTTGTTAAACGGTTATTCCTT 57.551 30.769 0.00 0.00 41.45 3.36
2137 2402 3.218209 AAACGACGAACCAAGCGCG 62.218 57.895 0.00 0.00 35.54 6.86
2138 2403 1.438222 GAAACGACGAACCAAGCGC 60.438 57.895 0.00 0.00 0.00 5.92
2139 2404 0.161024 GAGAAACGACGAACCAAGCG 59.839 55.000 0.00 0.00 0.00 4.68
2140 2405 0.511653 GGAGAAACGACGAACCAAGC 59.488 55.000 0.00 0.00 0.00 4.01
2141 2406 0.782384 CGGAGAAACGACGAACCAAG 59.218 55.000 0.00 0.00 35.47 3.61
2142 2407 1.216941 GCGGAGAAACGACGAACCAA 61.217 55.000 0.00 0.00 35.47 3.67
2143 2408 1.662446 GCGGAGAAACGACGAACCA 60.662 57.895 0.00 0.00 35.47 3.67
2144 2409 2.378084 GGCGGAGAAACGACGAACC 61.378 63.158 0.00 0.00 35.47 3.62
2145 2410 3.153609 GGCGGAGAAACGACGAAC 58.846 61.111 0.00 0.00 35.47 3.95
2149 2414 0.794473 AAATTCGGCGGAGAAACGAC 59.206 50.000 7.21 0.00 38.87 4.34
2150 2415 2.367030 TAAATTCGGCGGAGAAACGA 57.633 45.000 7.21 0.00 35.47 3.85
2151 2416 3.668596 AATAAATTCGGCGGAGAAACG 57.331 42.857 7.21 0.00 33.43 3.60
2152 2417 4.796830 GGAAAATAAATTCGGCGGAGAAAC 59.203 41.667 7.21 0.00 33.43 2.78
2153 2418 4.459685 TGGAAAATAAATTCGGCGGAGAAA 59.540 37.500 7.21 0.00 33.43 2.52
2154 2419 4.011023 TGGAAAATAAATTCGGCGGAGAA 58.989 39.130 7.21 0.00 34.31 2.87
2155 2420 3.375922 GTGGAAAATAAATTCGGCGGAGA 59.624 43.478 7.21 0.00 0.00 3.71
2156 2421 3.488553 GGTGGAAAATAAATTCGGCGGAG 60.489 47.826 7.21 0.00 0.00 4.63
2157 2422 2.424246 GGTGGAAAATAAATTCGGCGGA 59.576 45.455 7.21 0.00 0.00 5.54
2158 2423 2.425668 AGGTGGAAAATAAATTCGGCGG 59.574 45.455 7.21 0.00 0.00 6.13
2159 2424 3.119637 ACAGGTGGAAAATAAATTCGGCG 60.120 43.478 0.00 0.00 0.00 6.46
2160 2425 4.450082 ACAGGTGGAAAATAAATTCGGC 57.550 40.909 0.00 0.00 0.00 5.54
2161 2426 7.153217 AGTTACAGGTGGAAAATAAATTCGG 57.847 36.000 0.00 0.00 0.00 4.30
2162 2427 8.512138 AGAAGTTACAGGTGGAAAATAAATTCG 58.488 33.333 0.00 0.00 35.86 3.34
2166 2431 9.629878 TGTAAGAAGTTACAGGTGGAAAATAAA 57.370 29.630 0.00 0.00 42.99 1.40
2179 2444 8.367156 AGTTTAATACGGGTGTAAGAAGTTACA 58.633 33.333 0.00 0.00 45.15 2.41
2180 2445 8.650714 CAGTTTAATACGGGTGTAAGAAGTTAC 58.349 37.037 0.00 0.00 39.31 2.50
2181 2446 7.818930 CCAGTTTAATACGGGTGTAAGAAGTTA 59.181 37.037 0.00 0.00 37.33 2.24
2182 2447 6.652062 CCAGTTTAATACGGGTGTAAGAAGTT 59.348 38.462 0.00 0.00 37.33 2.66
2183 2448 6.168389 CCAGTTTAATACGGGTGTAAGAAGT 58.832 40.000 0.00 0.00 37.33 3.01
2184 2449 5.064325 GCCAGTTTAATACGGGTGTAAGAAG 59.936 44.000 0.00 0.00 43.29 2.85
2185 2450 4.937015 GCCAGTTTAATACGGGTGTAAGAA 59.063 41.667 0.00 0.00 43.29 2.52
2186 2451 4.506758 GCCAGTTTAATACGGGTGTAAGA 58.493 43.478 0.00 0.00 43.29 2.10
2187 2452 3.624410 GGCCAGTTTAATACGGGTGTAAG 59.376 47.826 0.00 0.00 43.29 2.34
2188 2453 3.008813 TGGCCAGTTTAATACGGGTGTAA 59.991 43.478 0.00 0.00 43.29 2.41
2189 2454 2.570752 TGGCCAGTTTAATACGGGTGTA 59.429 45.455 0.00 0.00 43.29 2.90
2190 2455 1.351683 TGGCCAGTTTAATACGGGTGT 59.648 47.619 0.00 0.00 43.29 4.16
2191 2456 1.741145 GTGGCCAGTTTAATACGGGTG 59.259 52.381 5.11 0.00 43.29 4.61
2192 2457 1.340308 GGTGGCCAGTTTAATACGGGT 60.340 52.381 5.11 0.00 43.29 5.28
2193 2458 1.385528 GGTGGCCAGTTTAATACGGG 58.614 55.000 5.11 0.00 44.10 5.28
2194 2459 1.385528 GGGTGGCCAGTTTAATACGG 58.614 55.000 5.11 0.00 0.00 4.02
2195 2460 1.011333 CGGGTGGCCAGTTTAATACG 58.989 55.000 5.11 0.00 0.00 3.06
2196 2461 2.118313 ACGGGTGGCCAGTTTAATAC 57.882 50.000 5.11 0.00 0.00 1.89
2197 2462 3.996921 TTACGGGTGGCCAGTTTAATA 57.003 42.857 5.11 0.00 33.35 0.98
2198 2463 2.883122 TTACGGGTGGCCAGTTTAAT 57.117 45.000 5.11 0.00 33.35 1.40
2199 2464 2.653234 TTTACGGGTGGCCAGTTTAA 57.347 45.000 5.11 0.00 33.35 1.52
2200 2465 2.622470 GTTTTTACGGGTGGCCAGTTTA 59.378 45.455 5.11 0.00 33.35 2.01
2201 2466 1.409790 GTTTTTACGGGTGGCCAGTTT 59.590 47.619 5.11 0.00 33.35 2.66
2202 2467 1.034356 GTTTTTACGGGTGGCCAGTT 58.966 50.000 5.11 0.00 33.35 3.16
2203 2468 0.824595 GGTTTTTACGGGTGGCCAGT 60.825 55.000 5.11 2.77 35.79 4.00
2204 2469 1.858372 CGGTTTTTACGGGTGGCCAG 61.858 60.000 5.11 0.00 0.00 4.85
2205 2470 1.897615 CGGTTTTTACGGGTGGCCA 60.898 57.895 0.00 0.00 0.00 5.36
2206 2471 2.956194 CGGTTTTTACGGGTGGCC 59.044 61.111 0.00 0.00 0.00 5.36
2213 2478 0.110101 CTTTCCGCCCGGTTTTTACG 60.110 55.000 6.61 0.00 36.47 3.18
2214 2479 1.237533 TCTTTCCGCCCGGTTTTTAC 58.762 50.000 6.61 0.00 36.47 2.01
2215 2480 1.978454 TTCTTTCCGCCCGGTTTTTA 58.022 45.000 6.61 0.00 36.47 1.52
2216 2481 1.112950 TTTCTTTCCGCCCGGTTTTT 58.887 45.000 6.61 0.00 36.47 1.94
2217 2482 1.112950 TTTTCTTTCCGCCCGGTTTT 58.887 45.000 6.61 0.00 36.47 2.43
2218 2483 0.386476 GTTTTCTTTCCGCCCGGTTT 59.614 50.000 6.61 0.00 36.47 3.27
2219 2484 1.788067 CGTTTTCTTTCCGCCCGGTT 61.788 55.000 6.61 0.00 36.47 4.44
2220 2485 2.255881 CGTTTTCTTTCCGCCCGGT 61.256 57.895 6.61 0.00 36.47 5.28
2221 2486 2.559330 CGTTTTCTTTCCGCCCGG 59.441 61.111 0.00 0.00 0.00 5.73
2222 2487 1.908066 CTCCGTTTTCTTTCCGCCCG 61.908 60.000 0.00 0.00 0.00 6.13
2223 2488 1.873863 CTCCGTTTTCTTTCCGCCC 59.126 57.895 0.00 0.00 0.00 6.13
2224 2489 1.209383 GCTCCGTTTTCTTTCCGCC 59.791 57.895 0.00 0.00 0.00 6.13
2225 2490 1.154469 CGCTCCGTTTTCTTTCCGC 60.154 57.895 0.00 0.00 0.00 5.54
2226 2491 0.110823 CACGCTCCGTTTTCTTTCCG 60.111 55.000 0.00 0.00 38.32 4.30
2227 2492 0.237498 CCACGCTCCGTTTTCTTTCC 59.763 55.000 0.00 0.00 38.32 3.13
2228 2493 0.237498 CCCACGCTCCGTTTTCTTTC 59.763 55.000 0.00 0.00 38.32 2.62
2229 2494 0.179040 TCCCACGCTCCGTTTTCTTT 60.179 50.000 0.00 0.00 38.32 2.52
2230 2495 0.602905 CTCCCACGCTCCGTTTTCTT 60.603 55.000 0.00 0.00 38.32 2.52
2231 2496 1.004918 CTCCCACGCTCCGTTTTCT 60.005 57.895 0.00 0.00 38.32 2.52
2232 2497 2.677979 GCTCCCACGCTCCGTTTTC 61.678 63.158 0.00 0.00 38.32 2.29
2233 2498 2.668550 GCTCCCACGCTCCGTTTT 60.669 61.111 0.00 0.00 38.32 2.43
2234 2499 3.626924 AGCTCCCACGCTCCGTTT 61.627 61.111 0.00 0.00 38.32 3.60
2235 2500 4.379243 CAGCTCCCACGCTCCGTT 62.379 66.667 0.00 0.00 38.32 4.44
2238 2503 1.961180 ATACACAGCTCCCACGCTCC 61.961 60.000 0.00 0.00 38.41 4.70
2239 2504 0.108138 AATACACAGCTCCCACGCTC 60.108 55.000 0.00 0.00 38.41 5.03
2240 2505 1.137086 CTAATACACAGCTCCCACGCT 59.863 52.381 0.00 0.00 41.90 5.07
2241 2506 1.134788 ACTAATACACAGCTCCCACGC 60.135 52.381 0.00 0.00 0.00 5.34
2242 2507 2.961526 ACTAATACACAGCTCCCACG 57.038 50.000 0.00 0.00 0.00 4.94
2243 2508 4.395231 GGAAAACTAATACACAGCTCCCAC 59.605 45.833 0.00 0.00 0.00 4.61
2244 2509 4.042311 TGGAAAACTAATACACAGCTCCCA 59.958 41.667 0.00 0.00 0.00 4.37
2245 2510 4.585879 TGGAAAACTAATACACAGCTCCC 58.414 43.478 0.00 0.00 0.00 4.30
2246 2511 4.636206 CCTGGAAAACTAATACACAGCTCC 59.364 45.833 0.00 0.00 0.00 4.70
2247 2512 4.095036 GCCTGGAAAACTAATACACAGCTC 59.905 45.833 0.00 0.00 0.00 4.09
2248 2513 4.010349 GCCTGGAAAACTAATACACAGCT 58.990 43.478 0.00 0.00 0.00 4.24
2249 2514 3.181510 CGCCTGGAAAACTAATACACAGC 60.182 47.826 0.00 0.00 0.00 4.40
2250 2515 3.374058 CCGCCTGGAAAACTAATACACAG 59.626 47.826 0.00 0.00 37.49 3.66
2251 2516 3.008157 TCCGCCTGGAAAACTAATACACA 59.992 43.478 0.00 0.00 42.85 3.72
2252 2517 3.602483 TCCGCCTGGAAAACTAATACAC 58.398 45.455 0.00 0.00 42.85 2.90
2253 2518 3.985019 TCCGCCTGGAAAACTAATACA 57.015 42.857 0.00 0.00 42.85 2.29
2264 2529 4.020617 CAGTGCCTTCCGCCTGGA 62.021 66.667 0.00 0.00 44.61 3.86
2265 2530 4.020617 TCAGTGCCTTCCGCCTGG 62.021 66.667 0.00 0.00 36.78 4.45
2266 2531 2.743928 GTCAGTGCCTTCCGCCTG 60.744 66.667 0.00 0.00 37.21 4.85
2267 2532 4.021925 GGTCAGTGCCTTCCGCCT 62.022 66.667 0.00 0.00 36.24 5.52
2276 2541 2.841160 AAAAACGGCCGGTCAGTGC 61.841 57.895 31.76 0.00 0.00 4.40
2277 2542 3.427670 AAAAACGGCCGGTCAGTG 58.572 55.556 31.76 0.00 0.00 3.66
2292 2557 5.360144 TGGTTGGTTGTTTAGATCCGAAAAA 59.640 36.000 0.00 0.00 0.00 1.94
2293 2558 4.888239 TGGTTGGTTGTTTAGATCCGAAAA 59.112 37.500 0.00 0.00 0.00 2.29
2294 2559 4.462133 TGGTTGGTTGTTTAGATCCGAAA 58.538 39.130 0.00 0.00 0.00 3.46
2295 2560 4.088056 TGGTTGGTTGTTTAGATCCGAA 57.912 40.909 0.00 0.00 0.00 4.30
2296 2561 3.773418 TGGTTGGTTGTTTAGATCCGA 57.227 42.857 0.00 0.00 0.00 4.55
2297 2562 3.365969 GCTTGGTTGGTTGTTTAGATCCG 60.366 47.826 0.00 0.00 0.00 4.18
2298 2563 3.365969 CGCTTGGTTGGTTGTTTAGATCC 60.366 47.826 0.00 0.00 0.00 3.36
2299 2564 3.365969 CCGCTTGGTTGGTTGTTTAGATC 60.366 47.826 0.00 0.00 0.00 2.75
2300 2565 2.556622 CCGCTTGGTTGGTTGTTTAGAT 59.443 45.455 0.00 0.00 0.00 1.98
2301 2566 1.950909 CCGCTTGGTTGGTTGTTTAGA 59.049 47.619 0.00 0.00 0.00 2.10
2302 2567 1.601914 GCCGCTTGGTTGGTTGTTTAG 60.602 52.381 0.00 0.00 34.16 1.85
2303 2568 0.386113 GCCGCTTGGTTGGTTGTTTA 59.614 50.000 0.00 0.00 34.16 2.01
2304 2569 1.142965 GCCGCTTGGTTGGTTGTTT 59.857 52.632 0.00 0.00 34.16 2.83
2305 2570 1.756561 AGCCGCTTGGTTGGTTGTT 60.757 52.632 0.00 0.00 34.16 2.83
2306 2571 2.123897 AGCCGCTTGGTTGGTTGT 60.124 55.556 0.00 0.00 34.16 3.32
2307 2572 2.015227 AACAGCCGCTTGGTTGGTTG 62.015 55.000 3.23 0.00 41.78 3.77
2308 2573 1.756561 AACAGCCGCTTGGTTGGTT 60.757 52.632 3.23 0.00 41.78 3.67
2312 2577 1.098712 TTCGAAACAGCCGCTTGGTT 61.099 50.000 0.00 0.00 34.16 3.67
2313 2578 1.098712 TTTCGAAACAGCCGCTTGGT 61.099 50.000 6.47 0.00 34.16 3.67
2314 2579 0.030101 TTTTCGAAACAGCCGCTTGG 59.970 50.000 10.79 0.00 0.00 3.61
2315 2580 1.398595 CTTTTCGAAACAGCCGCTTG 58.601 50.000 10.79 0.00 0.00 4.01
2316 2581 0.317854 GCTTTTCGAAACAGCCGCTT 60.318 50.000 23.21 0.00 0.00 4.68
2317 2582 1.282875 GCTTTTCGAAACAGCCGCT 59.717 52.632 23.21 0.00 0.00 5.52
2318 2583 1.008995 TGCTTTTCGAAACAGCCGC 60.009 52.632 27.12 18.32 32.11 6.53
2319 2584 0.991770 CGTGCTTTTCGAAACAGCCG 60.992 55.000 27.12 25.03 32.11 5.52
2320 2585 0.028902 ACGTGCTTTTCGAAACAGCC 59.971 50.000 27.12 20.84 32.11 4.85
2321 2586 2.656192 TACGTGCTTTTCGAAACAGC 57.344 45.000 25.23 25.23 0.00 4.40
2322 2587 4.768145 TCAATACGTGCTTTTCGAAACAG 58.232 39.130 10.79 12.05 0.00 3.16
2323 2588 4.797693 TCAATACGTGCTTTTCGAAACA 57.202 36.364 10.79 3.39 0.00 2.83
2324 2589 6.669485 AAATCAATACGTGCTTTTCGAAAC 57.331 33.333 10.79 0.36 0.00 2.78
2325 2590 6.361214 GGAAAATCAATACGTGCTTTTCGAAA 59.639 34.615 6.47 6.47 46.38 3.46
2326 2591 5.854338 GGAAAATCAATACGTGCTTTTCGAA 59.146 36.000 0.00 0.00 46.38 3.71
2327 2592 5.387279 GGAAAATCAATACGTGCTTTTCGA 58.613 37.500 0.00 0.00 46.38 3.71
2328 2593 4.259734 CGGAAAATCAATACGTGCTTTTCG 59.740 41.667 0.00 0.00 46.38 3.46
2329 2594 4.557301 CCGGAAAATCAATACGTGCTTTTC 59.443 41.667 0.00 1.76 45.42 2.29
2330 2595 4.481463 CCGGAAAATCAATACGTGCTTTT 58.519 39.130 0.00 0.00 38.06 2.27
2331 2596 3.672241 GCCGGAAAATCAATACGTGCTTT 60.672 43.478 5.05 0.00 0.00 3.51
2332 2597 2.159435 GCCGGAAAATCAATACGTGCTT 60.159 45.455 5.05 0.00 0.00 3.91
2333 2598 1.400494 GCCGGAAAATCAATACGTGCT 59.600 47.619 5.05 0.00 0.00 4.40
2334 2599 1.400494 AGCCGGAAAATCAATACGTGC 59.600 47.619 5.05 0.00 0.00 5.34
2335 2600 2.223249 CCAGCCGGAAAATCAATACGTG 60.223 50.000 5.05 0.00 0.00 4.49
2336 2601 2.014128 CCAGCCGGAAAATCAATACGT 58.986 47.619 5.05 0.00 0.00 3.57
2337 2602 2.285083 TCCAGCCGGAAAATCAATACG 58.715 47.619 5.05 0.00 38.83 3.06
2349 2614 1.427819 GCGTAAAACATCCAGCCGG 59.572 57.895 0.00 0.00 0.00 6.13
2350 2615 1.427819 GGCGTAAAACATCCAGCCG 59.572 57.895 0.00 0.00 34.94 5.52
2351 2616 0.451783 CAGGCGTAAAACATCCAGCC 59.548 55.000 0.00 0.00 44.45 4.85
2352 2617 1.165270 ACAGGCGTAAAACATCCAGC 58.835 50.000 0.00 0.00 0.00 4.85
2353 2618 4.260212 CGATTACAGGCGTAAAACATCCAG 60.260 45.833 6.14 0.00 40.89 3.86
2354 2619 3.619483 CGATTACAGGCGTAAAACATCCA 59.381 43.478 6.14 0.00 40.89 3.41
2355 2620 3.619929 ACGATTACAGGCGTAAAACATCC 59.380 43.478 0.00 0.00 40.89 3.51
2356 2621 4.260091 GGACGATTACAGGCGTAAAACATC 60.260 45.833 0.00 3.29 40.89 3.06
2357 2622 3.619929 GGACGATTACAGGCGTAAAACAT 59.380 43.478 0.00 0.00 40.89 2.71
2358 2623 2.995258 GGACGATTACAGGCGTAAAACA 59.005 45.455 0.00 0.00 40.89 2.83
2359 2624 2.349580 GGGACGATTACAGGCGTAAAAC 59.650 50.000 0.00 4.07 40.89 2.43
2360 2625 2.234414 AGGGACGATTACAGGCGTAAAA 59.766 45.455 0.00 0.00 40.89 1.52
2361 2626 1.826720 AGGGACGATTACAGGCGTAAA 59.173 47.619 0.00 0.00 40.89 2.01
2362 2627 1.135527 CAGGGACGATTACAGGCGTAA 59.864 52.381 0.00 4.82 41.34 3.18
2363 2628 0.742505 CAGGGACGATTACAGGCGTA 59.257 55.000 0.00 0.00 41.34 4.42
2364 2629 0.968901 TCAGGGACGATTACAGGCGT 60.969 55.000 0.00 0.00 44.33 5.68
2365 2630 0.174845 TTCAGGGACGATTACAGGCG 59.825 55.000 0.00 0.00 0.00 5.52
2366 2631 2.007608 GTTTCAGGGACGATTACAGGC 58.992 52.381 0.00 0.00 0.00 4.85
2367 2632 2.094390 TCGTTTCAGGGACGATTACAGG 60.094 50.000 0.00 0.00 43.79 4.00
2368 2633 3.226346 TCGTTTCAGGGACGATTACAG 57.774 47.619 0.00 0.00 43.79 2.74
2374 2639 1.337447 GGATTGTCGTTTCAGGGACGA 60.337 52.381 0.00 0.00 46.15 4.20
2375 2640 1.076332 GGATTGTCGTTTCAGGGACG 58.924 55.000 0.00 0.00 41.62 4.79
2376 2641 2.178912 TGGATTGTCGTTTCAGGGAC 57.821 50.000 0.00 0.00 0.00 4.46
2377 2642 2.940994 TTGGATTGTCGTTTCAGGGA 57.059 45.000 0.00 0.00 0.00 4.20
2378 2643 3.081061 TGATTGGATTGTCGTTTCAGGG 58.919 45.455 0.00 0.00 0.00 4.45
2379 2644 3.424829 CGTGATTGGATTGTCGTTTCAGG 60.425 47.826 0.00 0.00 0.00 3.86
2380 2645 3.736213 CGTGATTGGATTGTCGTTTCAG 58.264 45.455 0.00 0.00 0.00 3.02
2381 2646 2.095969 GCGTGATTGGATTGTCGTTTCA 60.096 45.455 0.00 0.00 0.00 2.69
2382 2647 2.095969 TGCGTGATTGGATTGTCGTTTC 60.096 45.455 0.00 0.00 0.00 2.78
2383 2648 1.876799 TGCGTGATTGGATTGTCGTTT 59.123 42.857 0.00 0.00 0.00 3.60
2384 2649 1.196808 GTGCGTGATTGGATTGTCGTT 59.803 47.619 0.00 0.00 0.00 3.85
2385 2650 0.796312 GTGCGTGATTGGATTGTCGT 59.204 50.000 0.00 0.00 0.00 4.34
2386 2651 0.795698 TGTGCGTGATTGGATTGTCG 59.204 50.000 0.00 0.00 0.00 4.35
2387 2652 2.987413 TTGTGCGTGATTGGATTGTC 57.013 45.000 0.00 0.00 0.00 3.18
2388 2653 3.940209 ATTTGTGCGTGATTGGATTGT 57.060 38.095 0.00 0.00 0.00 2.71
2389 2654 3.181528 GCAATTTGTGCGTGATTGGATTG 60.182 43.478 0.00 0.00 45.10 2.67
2390 2655 2.995258 GCAATTTGTGCGTGATTGGATT 59.005 40.909 0.00 0.00 45.10 3.01
2391 2656 2.609350 GCAATTTGTGCGTGATTGGAT 58.391 42.857 0.00 0.00 45.10 3.41
2392 2657 2.063156 GCAATTTGTGCGTGATTGGA 57.937 45.000 0.00 0.00 45.10 3.53
2421 2686 6.693466 TCTGGATTGACGTTAACTACATCAA 58.307 36.000 3.71 8.59 34.03 2.57
2449 2714 1.806542 CCCAAAGTGAATCCAGACACG 59.193 52.381 0.00 0.00 41.22 4.49
2543 2808 4.258702 ACATCTGTTACAGTCCTGTGTC 57.741 45.455 12.41 3.97 44.63 3.67


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.