Multiple sequence alignment - TraesCS5B01G308500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G308500 chr5B 100.000 2549 0 0 1 2549 491244957 491247505 0.000000e+00 4708.0
1 TraesCS5B01G308500 chr5B 96.689 453 14 1 2097 2549 14766224 14765773 0.000000e+00 752.0
2 TraesCS5B01G308500 chr5B 96.689 453 14 1 2097 2549 14813585 14813134 0.000000e+00 752.0
3 TraesCS5B01G308500 chr5B 84.165 701 85 18 936 1630 491370139 491370819 0.000000e+00 656.0
4 TraesCS5B01G308500 chr5B 84.746 649 73 15 969 1611 491272681 491273309 5.990000e-176 627.0
5 TraesCS5B01G308500 chr5B 87.330 442 53 3 2099 2537 243414697 243415138 1.050000e-138 503.0
6 TraesCS5B01G308500 chr5B 86.253 451 56 5 2091 2537 7013618 7013170 3.810000e-133 484.0
7 TraesCS5B01G308500 chr5B 85.900 461 58 7 2093 2549 658378838 658378381 3.810000e-133 484.0
8 TraesCS5B01G308500 chr5A 88.171 1471 123 35 541 1996 520680332 520681766 0.000000e+00 1705.0
9 TraesCS5B01G308500 chr5A 81.657 845 93 36 936 1746 520705847 520706663 0.000000e+00 645.0
10 TraesCS5B01G308500 chr5A 83.960 692 85 17 937 1623 520729484 520730154 7.690000e-180 640.0
11 TraesCS5B01G308500 chr5A 83.409 657 75 20 969 1611 520697442 520698078 1.700000e-161 579.0
12 TraesCS5B01G308500 chr5D 89.430 1334 86 32 544 1862 409454088 409455381 0.000000e+00 1631.0
13 TraesCS5B01G308500 chr5D 85.059 676 76 18 936 1606 409575546 409576201 0.000000e+00 665.0
14 TraesCS5B01G308500 chr5D 84.485 651 73 17 969 1611 409523239 409523869 3.600000e-173 617.0
15 TraesCS5B01G308500 chr5D 91.803 61 2 1 1997 2054 273117886 273117946 5.840000e-12 82.4
16 TraesCS5B01G308500 chr5D 78.161 87 19 0 1913 1999 409455454 409455540 3.540000e-04 56.5
17 TraesCS5B01G308500 chr4B 96.082 536 18 3 3 537 649681773 649682306 0.000000e+00 870.0
18 TraesCS5B01G308500 chr4B 95.522 536 21 3 3 537 588582175 588581642 0.000000e+00 854.0
19 TraesCS5B01G308500 chr4B 86.517 445 55 4 2097 2537 629935480 629935923 3.810000e-133 484.0
20 TraesCS5B01G308500 chr4B 92.857 56 2 1 1997 2052 515146011 515145958 2.100000e-11 80.5
21 TraesCS5B01G308500 chr4B 87.879 66 6 2 1989 2052 622109223 622109288 2.720000e-10 76.8
22 TraesCS5B01G308500 chr3B 96.082 536 18 3 3 537 2342792 2342259 0.000000e+00 870.0
23 TraesCS5B01G308500 chr3B 95.318 534 22 3 3 535 256360748 256361279 0.000000e+00 845.0
24 TraesCS5B01G308500 chr7B 95.733 539 21 2 1 537 648097896 648098434 0.000000e+00 867.0
25 TraesCS5B01G308500 chr7B 96.030 529 18 3 3 530 632802445 632802971 0.000000e+00 857.0
26 TraesCS5B01G308500 chr7B 80.153 131 18 8 1878 2005 174684626 174684501 9.710000e-15 91.6
27 TraesCS5B01G308500 chr6B 96.067 534 18 3 3 535 641301393 641300862 0.000000e+00 867.0
28 TraesCS5B01G308500 chr6B 94.972 537 25 2 1 535 698446465 698447001 0.000000e+00 841.0
29 TraesCS5B01G308500 chr6B 94.972 537 25 2 1 535 698807999 698807463 0.000000e+00 841.0
30 TraesCS5B01G308500 chrUn 96.491 456 15 1 2094 2549 325789092 325789546 0.000000e+00 752.0
31 TraesCS5B01G308500 chr2B 96.247 453 17 0 2097 2549 7654363 7653911 0.000000e+00 743.0
32 TraesCS5B01G308500 chr4A 85.903 454 62 2 2098 2549 666265542 666265089 1.370000e-132 483.0
33 TraesCS5B01G308500 chr4A 92.857 56 4 0 1995 2050 46225836 46225781 5.840000e-12 82.4
34 TraesCS5B01G308500 chr1B 96.364 55 2 0 1997 2051 661577956 661577902 9.710000e-15 91.6
35 TraesCS5B01G308500 chr7D 92.982 57 3 1 1996 2051 469633935 469633879 5.840000e-12 82.4
36 TraesCS5B01G308500 chr2D 91.525 59 3 1 1995 2051 455894589 455894647 2.100000e-11 80.5
37 TraesCS5B01G308500 chr2D 90.000 60 4 1 1993 2052 274856321 274856378 2.720000e-10 76.8
38 TraesCS5B01G308500 chr1A 90.476 63 3 3 1995 2054 47204578 47204516 2.100000e-11 80.5
39 TraesCS5B01G308500 chr7A 77.863 131 26 3 1878 2005 236514597 236514727 7.560000e-11 78.7


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G308500 chr5B 491244957 491247505 2548 False 4708.00 4708 100.0000 1 2549 1 chr5B.!!$F2 2548
1 TraesCS5B01G308500 chr5B 491370139 491370819 680 False 656.00 656 84.1650 936 1630 1 chr5B.!!$F4 694
2 TraesCS5B01G308500 chr5B 491272681 491273309 628 False 627.00 627 84.7460 969 1611 1 chr5B.!!$F3 642
3 TraesCS5B01G308500 chr5A 520680332 520681766 1434 False 1705.00 1705 88.1710 541 1996 1 chr5A.!!$F1 1455
4 TraesCS5B01G308500 chr5A 520705847 520706663 816 False 645.00 645 81.6570 936 1746 1 chr5A.!!$F3 810
5 TraesCS5B01G308500 chr5A 520729484 520730154 670 False 640.00 640 83.9600 937 1623 1 chr5A.!!$F4 686
6 TraesCS5B01G308500 chr5A 520697442 520698078 636 False 579.00 579 83.4090 969 1611 1 chr5A.!!$F2 642
7 TraesCS5B01G308500 chr5D 409454088 409455540 1452 False 843.75 1631 83.7955 544 1999 2 chr5D.!!$F4 1455
8 TraesCS5B01G308500 chr5D 409575546 409576201 655 False 665.00 665 85.0590 936 1606 1 chr5D.!!$F3 670
9 TraesCS5B01G308500 chr5D 409523239 409523869 630 False 617.00 617 84.4850 969 1611 1 chr5D.!!$F2 642
10 TraesCS5B01G308500 chr4B 649681773 649682306 533 False 870.00 870 96.0820 3 537 1 chr4B.!!$F3 534
11 TraesCS5B01G308500 chr4B 588581642 588582175 533 True 854.00 854 95.5220 3 537 1 chr4B.!!$R2 534
12 TraesCS5B01G308500 chr3B 2342259 2342792 533 True 870.00 870 96.0820 3 537 1 chr3B.!!$R1 534
13 TraesCS5B01G308500 chr3B 256360748 256361279 531 False 845.00 845 95.3180 3 535 1 chr3B.!!$F1 532
14 TraesCS5B01G308500 chr7B 648097896 648098434 538 False 867.00 867 95.7330 1 537 1 chr7B.!!$F2 536
15 TraesCS5B01G308500 chr7B 632802445 632802971 526 False 857.00 857 96.0300 3 530 1 chr7B.!!$F1 527
16 TraesCS5B01G308500 chr6B 641300862 641301393 531 True 867.00 867 96.0670 3 535 1 chr6B.!!$R1 532
17 TraesCS5B01G308500 chr6B 698446465 698447001 536 False 841.00 841 94.9720 1 535 1 chr6B.!!$F1 534
18 TraesCS5B01G308500 chr6B 698807463 698807999 536 True 841.00 841 94.9720 1 535 1 chr6B.!!$R2 534

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
696 713 0.242825 CGTAGACGGGAGCTTTCACA 59.757 55.0 0.0 0.0 35.37 3.58 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2326 2444 0.035036 TTTGGATGGCGGTCGTGTAA 59.965 50.0 0.0 0.0 0.0 2.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
217 221 0.940519 CGGCGTTTTAGTCGTGGTGA 60.941 55.000 0.00 0.00 34.13 4.02
278 282 1.406887 CCCCGGTCTGATTCGTTCAAT 60.407 52.381 0.00 0.00 32.78 2.57
298 302 4.600692 ATGGTAAGGGTTTCACTTTTGC 57.399 40.909 0.00 0.00 0.00 3.68
345 349 0.321034 GCATATCAGCGATGGAGCCA 60.321 55.000 0.00 0.00 38.01 4.75
360 364 2.697761 GCCACGTCGAGCTCAGGTA 61.698 63.158 15.40 0.00 0.00 3.08
395 399 4.569162 CGTCATTATTTTCTTCGGTGGCTA 59.431 41.667 0.00 0.00 0.00 3.93
537 542 9.716531 ATGAATGAGACACGTATTATCATGAAT 57.283 29.630 0.00 0.00 31.24 2.57
538 543 9.546428 TGAATGAGACACGTATTATCATGAATT 57.454 29.630 0.00 0.00 31.24 2.17
638 655 2.642171 TGATAAGAGTGGGGACAGGT 57.358 50.000 0.00 0.00 44.46 4.00
660 677 0.388907 CCCGTACGTCCACATTCGTT 60.389 55.000 15.21 0.00 40.70 3.85
661 678 0.986992 CCGTACGTCCACATTCGTTC 59.013 55.000 15.21 0.00 40.70 3.95
662 679 1.666599 CCGTACGTCCACATTCGTTCA 60.667 52.381 15.21 0.00 40.70 3.18
663 680 2.052891 CGTACGTCCACATTCGTTCAA 58.947 47.619 7.22 0.00 40.70 2.69
664 681 2.160065 CGTACGTCCACATTCGTTCAAC 60.160 50.000 7.22 0.00 40.70 3.18
665 682 2.234300 ACGTCCACATTCGTTCAACT 57.766 45.000 0.00 0.00 36.93 3.16
682 699 2.479566 ACTCCACTAACGGTCGTAGA 57.520 50.000 0.00 0.00 0.00 2.59
696 713 0.242825 CGTAGACGGGAGCTTTCACA 59.757 55.000 0.00 0.00 35.37 3.58
704 721 3.244422 ACGGGAGCTTTCACAAACAGATA 60.244 43.478 0.00 0.00 0.00 1.98
705 722 3.372206 CGGGAGCTTTCACAAACAGATAG 59.628 47.826 0.00 0.00 0.00 2.08
730 747 0.609131 GCCCAAACTCAGCTGCCTAA 60.609 55.000 9.47 0.00 0.00 2.69
783 800 2.412325 CGCCCGCTTTTACAAAGTACAG 60.412 50.000 0.00 0.00 0.00 2.74
837 854 3.231818 CGCCCTCCTATATATACCCCAG 58.768 54.545 0.00 0.00 0.00 4.45
862 886 1.957177 AGAGCAGAGAACGACAGACAA 59.043 47.619 0.00 0.00 0.00 3.18
863 887 2.030363 AGAGCAGAGAACGACAGACAAG 60.030 50.000 0.00 0.00 0.00 3.16
895 919 0.250901 ACACAGCCACCAATCCAGTC 60.251 55.000 0.00 0.00 0.00 3.51
916 943 7.361371 CCAGTCCGAATATACTACTAGCTTGAG 60.361 44.444 1.04 0.00 0.00 3.02
1023 1055 2.183300 CGTCCCGATTCCGAAGCA 59.817 61.111 0.00 0.00 38.22 3.91
1026 1058 1.987855 TCCCGATTCCGAAGCACCT 60.988 57.895 0.00 0.00 38.22 4.00
1140 1178 2.190313 GTGATCATCCTGGCCGCA 59.810 61.111 0.00 0.00 0.00 5.69
1476 1514 3.626924 GGCTCCTGTCCCACGTGT 61.627 66.667 15.65 0.00 0.00 4.49
1522 1584 1.512310 GCGAAGAGTGAGACGGACG 60.512 63.158 0.00 0.00 0.00 4.79
1543 1605 0.537188 GGTCATCACCGTGGTCATCT 59.463 55.000 0.00 0.00 31.06 2.90
1643 1717 3.497332 TCAGGCGCTATTACTAGTGGAT 58.503 45.455 7.64 2.23 36.23 3.41
1644 1718 3.895656 TCAGGCGCTATTACTAGTGGATT 59.104 43.478 7.64 0.00 36.23 3.01
1645 1719 5.074804 TCAGGCGCTATTACTAGTGGATTA 58.925 41.667 7.64 0.00 36.23 1.75
1646 1720 5.715279 TCAGGCGCTATTACTAGTGGATTAT 59.285 40.000 7.64 0.00 36.23 1.28
1651 1725 7.816031 GGCGCTATTACTAGTGGATTATTGTAA 59.184 37.037 7.64 0.00 36.23 2.41
1755 1834 5.437289 TGCTGAATTACTTTGTTCCAGTG 57.563 39.130 0.00 0.00 0.00 3.66
1767 1846 3.138304 TGTTCCAGTGTTCAATTCTCCG 58.862 45.455 0.00 0.00 0.00 4.63
1773 1859 2.104111 AGTGTTCAATTCTCCGTCACCA 59.896 45.455 0.00 0.00 0.00 4.17
1788 1874 2.756760 GTCACCATCGACAAGTAGGGTA 59.243 50.000 0.00 0.00 35.88 3.69
1828 1914 2.802787 CATGGATGGAGGACGACTAC 57.197 55.000 0.00 0.00 0.00 2.73
1829 1915 2.311463 CATGGATGGAGGACGACTACT 58.689 52.381 0.00 0.00 0.00 2.57
1830 1916 3.487372 CATGGATGGAGGACGACTACTA 58.513 50.000 0.00 0.00 0.00 1.82
1836 1922 2.290768 TGGAGGACGACTACTAACTGCT 60.291 50.000 0.00 0.00 0.00 4.24
1838 1924 3.272581 GAGGACGACTACTAACTGCTCT 58.727 50.000 0.00 0.00 0.00 4.09
1876 1992 1.025812 ATGCTACTCTCTCCGTTCCG 58.974 55.000 0.00 0.00 0.00 4.30
1885 2001 0.108520 TCTCCGTTCCGTAATGTGCC 60.109 55.000 0.00 0.00 0.00 5.01
1965 2083 9.153721 CAAAAATGTTTGTATCTGCAATACCAT 57.846 29.630 0.00 8.68 39.49 3.55
1999 2117 9.546909 CAATTGAAAGTATGTCTTGTGATGTAC 57.453 33.333 0.00 0.00 36.40 2.90
2000 2118 9.507329 AATTGAAAGTATGTCTTGTGATGTACT 57.493 29.630 0.00 0.00 36.40 2.73
2001 2119 8.534333 TTGAAAGTATGTCTTGTGATGTACTC 57.466 34.615 0.00 0.00 36.40 2.59
2002 2120 7.097192 TGAAAGTATGTCTTGTGATGTACTCC 58.903 38.462 0.00 0.00 36.40 3.85
2003 2121 5.599999 AGTATGTCTTGTGATGTACTCCC 57.400 43.478 0.00 0.00 0.00 4.30
2004 2122 5.273208 AGTATGTCTTGTGATGTACTCCCT 58.727 41.667 0.00 0.00 0.00 4.20
2005 2123 4.744795 ATGTCTTGTGATGTACTCCCTC 57.255 45.455 0.00 0.00 0.00 4.30
2006 2124 2.832129 TGTCTTGTGATGTACTCCCTCC 59.168 50.000 0.00 0.00 0.00 4.30
2007 2125 2.100197 TCTTGTGATGTACTCCCTCCG 58.900 52.381 0.00 0.00 0.00 4.63
2008 2126 1.825474 CTTGTGATGTACTCCCTCCGT 59.175 52.381 0.00 0.00 0.00 4.69
2009 2127 2.812836 TGTGATGTACTCCCTCCGTA 57.187 50.000 0.00 0.00 0.00 4.02
2010 2128 3.090210 TGTGATGTACTCCCTCCGTAA 57.910 47.619 0.00 0.00 0.00 3.18
2011 2129 3.433343 TGTGATGTACTCCCTCCGTAAA 58.567 45.455 0.00 0.00 0.00 2.01
2012 2130 3.446161 TGTGATGTACTCCCTCCGTAAAG 59.554 47.826 0.00 0.00 0.00 1.85
2013 2131 3.698040 GTGATGTACTCCCTCCGTAAAGA 59.302 47.826 0.00 0.00 0.00 2.52
2014 2132 4.159135 GTGATGTACTCCCTCCGTAAAGAA 59.841 45.833 0.00 0.00 0.00 2.52
2015 2133 4.773674 TGATGTACTCCCTCCGTAAAGAAA 59.226 41.667 0.00 0.00 0.00 2.52
2016 2134 5.424252 TGATGTACTCCCTCCGTAAAGAAAT 59.576 40.000 0.00 0.00 0.00 2.17
2017 2135 6.608405 TGATGTACTCCCTCCGTAAAGAAATA 59.392 38.462 0.00 0.00 0.00 1.40
2018 2136 7.289317 TGATGTACTCCCTCCGTAAAGAAATAT 59.711 37.037 0.00 0.00 0.00 1.28
2019 2137 8.716674 ATGTACTCCCTCCGTAAAGAAATATA 57.283 34.615 0.00 0.00 0.00 0.86
2020 2138 8.537728 TGTACTCCCTCCGTAAAGAAATATAA 57.462 34.615 0.00 0.00 0.00 0.98
2021 2139 8.636213 TGTACTCCCTCCGTAAAGAAATATAAG 58.364 37.037 0.00 0.00 0.00 1.73
2022 2140 7.909485 ACTCCCTCCGTAAAGAAATATAAGA 57.091 36.000 0.00 0.00 0.00 2.10
2023 2141 7.953752 ACTCCCTCCGTAAAGAAATATAAGAG 58.046 38.462 0.00 0.00 0.00 2.85
2024 2142 6.756221 TCCCTCCGTAAAGAAATATAAGAGC 58.244 40.000 0.00 0.00 0.00 4.09
2025 2143 5.634020 CCCTCCGTAAAGAAATATAAGAGCG 59.366 44.000 0.00 0.00 0.00 5.03
2026 2144 6.214399 CCTCCGTAAAGAAATATAAGAGCGT 58.786 40.000 0.00 0.00 0.00 5.07
2027 2145 6.700520 CCTCCGTAAAGAAATATAAGAGCGTT 59.299 38.462 0.00 0.00 0.00 4.84
2028 2146 7.224167 CCTCCGTAAAGAAATATAAGAGCGTTT 59.776 37.037 0.00 0.00 0.00 3.60
2029 2147 9.241317 CTCCGTAAAGAAATATAAGAGCGTTTA 57.759 33.333 0.00 0.00 0.00 2.01
2030 2148 9.241317 TCCGTAAAGAAATATAAGAGCGTTTAG 57.759 33.333 0.00 0.00 0.00 1.85
2031 2149 9.241317 CCGTAAAGAAATATAAGAGCGTTTAGA 57.759 33.333 0.00 0.00 0.00 2.10
2042 2160 8.922058 ATAAGAGCGTTTAGATTTCTTTACGA 57.078 30.769 14.43 0.00 35.19 3.43
2043 2161 7.647907 AAGAGCGTTTAGATTTCTTTACGAA 57.352 32.000 14.43 0.00 35.19 3.85
2044 2162 7.279470 AGAGCGTTTAGATTTCTTTACGAAG 57.721 36.000 14.43 0.00 35.19 3.79
2045 2163 6.310711 AGAGCGTTTAGATTTCTTTACGAAGG 59.689 38.462 14.43 0.00 35.19 3.46
2046 2164 5.350640 AGCGTTTAGATTTCTTTACGAAGGG 59.649 40.000 14.43 0.00 35.19 3.95
2047 2165 5.349543 GCGTTTAGATTTCTTTACGAAGGGA 59.650 40.000 14.43 0.00 35.19 4.20
2048 2166 6.455246 GCGTTTAGATTTCTTTACGAAGGGAG 60.455 42.308 14.43 0.00 35.19 4.30
2049 2167 6.589139 CGTTTAGATTTCTTTACGAAGGGAGT 59.411 38.462 7.85 0.00 35.19 3.85
2050 2168 7.756722 CGTTTAGATTTCTTTACGAAGGGAGTA 59.243 37.037 7.85 0.00 35.19 2.59
2051 2169 9.597170 GTTTAGATTTCTTTACGAAGGGAGTAT 57.403 33.333 0.00 0.00 33.56 2.12
2052 2170 9.813446 TTTAGATTTCTTTACGAAGGGAGTATC 57.187 33.333 0.00 0.00 33.56 2.24
2053 2171 7.663043 AGATTTCTTTACGAAGGGAGTATCT 57.337 36.000 0.00 0.00 33.56 1.98
2054 2172 8.763984 AGATTTCTTTACGAAGGGAGTATCTA 57.236 34.615 0.00 0.00 33.56 1.98
2055 2173 9.198475 AGATTTCTTTACGAAGGGAGTATCTAA 57.802 33.333 0.00 0.00 33.56 2.10
2056 2174 9.984190 GATTTCTTTACGAAGGGAGTATCTAAT 57.016 33.333 0.00 0.00 33.56 1.73
2057 2175 9.765795 ATTTCTTTACGAAGGGAGTATCTAATG 57.234 33.333 0.00 0.00 33.56 1.90
2058 2176 8.529424 TTCTTTACGAAGGGAGTATCTAATGA 57.471 34.615 0.00 0.00 33.56 2.57
2059 2177 8.707796 TCTTTACGAAGGGAGTATCTAATGAT 57.292 34.615 0.00 0.00 33.95 2.45
2060 2178 9.803507 TCTTTACGAAGGGAGTATCTAATGATA 57.196 33.333 0.00 0.00 32.73 2.15
2063 2181 6.868622 ACGAAGGGAGTATCTAATGATATGC 58.131 40.000 0.00 0.00 37.48 3.14
2064 2182 6.437477 ACGAAGGGAGTATCTAATGATATGCA 59.563 38.462 0.00 0.00 37.48 3.96
2065 2183 7.124901 ACGAAGGGAGTATCTAATGATATGCAT 59.875 37.037 3.79 3.79 37.48 3.96
2067 2185 9.678260 GAAGGGAGTATCTAATGATATGCATTT 57.322 33.333 3.54 0.00 46.03 2.32
2068 2186 9.458727 AAGGGAGTATCTAATGATATGCATTTG 57.541 33.333 3.54 0.00 46.03 2.32
2069 2187 8.051535 AGGGAGTATCTAATGATATGCATTTGG 58.948 37.037 3.54 0.00 46.03 3.28
2070 2188 7.831193 GGGAGTATCTAATGATATGCATTTGGT 59.169 37.037 3.54 0.00 46.03 3.67
2071 2189 9.890629 GGAGTATCTAATGATATGCATTTGGTA 57.109 33.333 3.54 0.00 46.03 3.25
2135 2253 4.247380 CTCCCCGGCCTCTGCATC 62.247 72.222 0.00 0.00 40.13 3.91
2137 2255 4.559063 CCCCGGCCTCTGCATCAG 62.559 72.222 0.00 0.00 40.13 2.90
2138 2256 3.473647 CCCGGCCTCTGCATCAGA 61.474 66.667 0.00 0.00 38.25 3.27
2139 2257 2.586245 CCGGCCTCTGCATCAGAA 59.414 61.111 0.00 0.00 40.18 3.02
2140 2258 1.078214 CCGGCCTCTGCATCAGAAA 60.078 57.895 0.00 0.00 40.18 2.52
2141 2259 1.094073 CCGGCCTCTGCATCAGAAAG 61.094 60.000 0.00 0.00 40.18 2.62
2142 2260 0.107993 CGGCCTCTGCATCAGAAAGA 60.108 55.000 0.00 0.00 40.18 2.52
2143 2261 1.474677 CGGCCTCTGCATCAGAAAGAT 60.475 52.381 0.00 0.00 40.18 2.40
2153 2271 4.722203 CATCAGAAAGATGCATACGACC 57.278 45.455 0.00 0.00 46.90 4.79
2154 2272 3.885724 TCAGAAAGATGCATACGACCA 57.114 42.857 0.00 0.00 0.00 4.02
2155 2273 4.406648 TCAGAAAGATGCATACGACCAT 57.593 40.909 0.00 0.00 0.00 3.55
2156 2274 4.371786 TCAGAAAGATGCATACGACCATC 58.628 43.478 0.00 0.00 38.45 3.51
2157 2275 7.234361 CATCAGAAAGATGCATACGACCATCT 61.234 42.308 0.00 0.00 46.90 2.90
2166 2284 8.939929 AGATGCATACGACCATCTTATTAATTG 58.060 33.333 0.00 0.00 44.15 2.32
2167 2285 8.846943 ATGCATACGACCATCTTATTAATTGA 57.153 30.769 0.00 0.00 0.00 2.57
2168 2286 8.669946 TGCATACGACCATCTTATTAATTGAA 57.330 30.769 0.00 0.00 0.00 2.69
2169 2287 9.283768 TGCATACGACCATCTTATTAATTGAAT 57.716 29.630 0.00 0.00 0.00 2.57
2186 2304 9.853555 TTAATTGAATAAAGTAGTGCCAACATG 57.146 29.630 0.00 0.00 0.00 3.21
2187 2305 5.895636 TGAATAAAGTAGTGCCAACATGG 57.104 39.130 0.00 0.00 41.55 3.66
2188 2306 5.321102 TGAATAAAGTAGTGCCAACATGGT 58.679 37.500 0.00 0.00 40.46 3.55
2189 2307 5.772672 TGAATAAAGTAGTGCCAACATGGTT 59.227 36.000 0.00 0.00 40.46 3.67
2190 2308 6.266558 TGAATAAAGTAGTGCCAACATGGTTT 59.733 34.615 0.00 0.00 40.46 3.27
2191 2309 4.320608 AAAGTAGTGCCAACATGGTTTG 57.679 40.909 0.00 0.00 40.46 2.93
2192 2310 3.222173 AGTAGTGCCAACATGGTTTGA 57.778 42.857 0.00 0.00 40.46 2.69
2193 2311 3.561143 AGTAGTGCCAACATGGTTTGAA 58.439 40.909 0.00 0.00 40.46 2.69
2194 2312 3.957497 AGTAGTGCCAACATGGTTTGAAA 59.043 39.130 0.00 0.00 40.46 2.69
2195 2313 3.457610 AGTGCCAACATGGTTTGAAAG 57.542 42.857 0.00 0.00 40.46 2.62
2196 2314 2.102925 AGTGCCAACATGGTTTGAAAGG 59.897 45.455 0.00 0.00 40.46 3.11
2197 2315 2.114616 TGCCAACATGGTTTGAAAGGT 58.885 42.857 0.00 0.00 40.46 3.50
2198 2316 2.102252 TGCCAACATGGTTTGAAAGGTC 59.898 45.455 0.00 0.00 40.46 3.85
2199 2317 2.365293 GCCAACATGGTTTGAAAGGTCT 59.635 45.455 0.00 0.00 40.46 3.85
2200 2318 3.181466 GCCAACATGGTTTGAAAGGTCTT 60.181 43.478 0.00 0.00 40.46 3.01
2201 2319 4.620982 CCAACATGGTTTGAAAGGTCTTC 58.379 43.478 0.00 0.00 31.35 2.87
2202 2320 4.099266 CCAACATGGTTTGAAAGGTCTTCA 59.901 41.667 0.00 0.00 31.35 3.02
2203 2321 5.395103 CCAACATGGTTTGAAAGGTCTTCAA 60.395 40.000 0.00 0.00 36.71 2.69
2204 2322 5.930837 ACATGGTTTGAAAGGTCTTCAAA 57.069 34.783 8.24 8.24 43.62 2.69
2205 2323 6.293004 ACATGGTTTGAAAGGTCTTCAAAA 57.707 33.333 12.79 1.65 46.16 2.44
2206 2324 6.340522 ACATGGTTTGAAAGGTCTTCAAAAG 58.659 36.000 12.79 7.44 46.16 2.27
2207 2325 5.993748 TGGTTTGAAAGGTCTTCAAAAGT 57.006 34.783 12.79 0.00 46.16 2.66
2208 2326 7.123547 ACATGGTTTGAAAGGTCTTCAAAAGTA 59.876 33.333 12.79 4.97 46.16 2.24
2209 2327 7.469537 TGGTTTGAAAGGTCTTCAAAAGTAA 57.530 32.000 12.79 0.00 46.16 2.24
2210 2328 8.073467 TGGTTTGAAAGGTCTTCAAAAGTAAT 57.927 30.769 12.79 0.00 46.16 1.89
2211 2329 9.191479 TGGTTTGAAAGGTCTTCAAAAGTAATA 57.809 29.630 12.79 0.00 46.16 0.98
2219 2337 9.529325 AAGGTCTTCAAAAGTAATAAAAAGCAC 57.471 29.630 0.00 0.00 0.00 4.40
2220 2338 8.691797 AGGTCTTCAAAAGTAATAAAAAGCACA 58.308 29.630 0.00 0.00 0.00 4.57
2221 2339 9.308318 GGTCTTCAAAAGTAATAAAAAGCACAA 57.692 29.630 0.00 0.00 0.00 3.33
2226 2344 9.980780 TCAAAAGTAATAAAAAGCACAAAAAGC 57.019 25.926 0.00 0.00 0.00 3.51
2227 2345 9.986833 CAAAAGTAATAAAAAGCACAAAAAGCT 57.013 25.926 0.00 0.00 45.97 3.74
2229 2347 8.940768 AAGTAATAAAAAGCACAAAAAGCTCA 57.059 26.923 0.00 0.00 42.53 4.26
2230 2348 8.352752 AGTAATAAAAAGCACAAAAAGCTCAC 57.647 30.769 0.00 0.00 42.53 3.51
2231 2349 7.978975 AGTAATAAAAAGCACAAAAAGCTCACA 59.021 29.630 0.00 0.00 42.53 3.58
2232 2350 4.926860 AAAAAGCACAAAAAGCTCACAC 57.073 36.364 0.00 0.00 42.53 3.82
2233 2351 3.591196 AAAGCACAAAAAGCTCACACA 57.409 38.095 0.00 0.00 42.53 3.72
2234 2352 2.857592 AGCACAAAAAGCTCACACAG 57.142 45.000 0.00 0.00 38.01 3.66
2235 2353 2.368439 AGCACAAAAAGCTCACACAGA 58.632 42.857 0.00 0.00 38.01 3.41
2245 2363 1.805869 CTCACACAGAGCCAAAGAGG 58.194 55.000 0.00 0.00 37.59 3.69
2246 2364 0.397941 TCACACAGAGCCAAAGAGGG 59.602 55.000 0.00 0.00 38.09 4.30
2258 2376 3.955471 CCAAAGAGGGCTAGAAACATCA 58.045 45.455 0.00 0.00 0.00 3.07
2259 2377 4.335416 CCAAAGAGGGCTAGAAACATCAA 58.665 43.478 0.00 0.00 0.00 2.57
2260 2378 4.397417 CCAAAGAGGGCTAGAAACATCAAG 59.603 45.833 0.00 0.00 0.00 3.02
2261 2379 4.917906 AAGAGGGCTAGAAACATCAAGT 57.082 40.909 0.00 0.00 0.00 3.16
2262 2380 6.173339 CAAAGAGGGCTAGAAACATCAAGTA 58.827 40.000 0.00 0.00 0.00 2.24
2263 2381 5.606348 AGAGGGCTAGAAACATCAAGTAG 57.394 43.478 0.00 0.00 0.00 2.57
2264 2382 4.123506 GAGGGCTAGAAACATCAAGTAGC 58.876 47.826 0.00 0.00 36.23 3.58
2268 2386 5.880054 GCTAGAAACATCAAGTAGCCAAA 57.120 39.130 0.00 0.00 31.71 3.28
2269 2387 6.254281 GCTAGAAACATCAAGTAGCCAAAA 57.746 37.500 0.00 0.00 31.71 2.44
2270 2388 6.677913 GCTAGAAACATCAAGTAGCCAAAAA 58.322 36.000 0.00 0.00 31.71 1.94
2285 2403 1.062845 AAAAACGACGCCACAACCG 59.937 52.632 0.00 0.00 0.00 4.44
2286 2404 2.325666 AAAAACGACGCCACAACCGG 62.326 55.000 0.00 0.00 0.00 5.28
2294 2412 2.272146 CCACAACCGGCTGGCTAT 59.728 61.111 12.89 0.00 39.70 2.97
2295 2413 1.524961 CCACAACCGGCTGGCTATA 59.475 57.895 12.89 0.00 39.70 1.31
2296 2414 0.107410 CCACAACCGGCTGGCTATAA 60.107 55.000 12.89 0.00 39.70 0.98
2297 2415 1.014352 CACAACCGGCTGGCTATAAC 58.986 55.000 12.89 0.00 39.70 1.89
2298 2416 0.909623 ACAACCGGCTGGCTATAACT 59.090 50.000 12.89 0.00 39.70 2.24
2299 2417 2.112998 ACAACCGGCTGGCTATAACTA 58.887 47.619 12.89 0.00 39.70 2.24
2300 2418 2.102588 ACAACCGGCTGGCTATAACTAG 59.897 50.000 12.89 0.00 39.70 2.57
2301 2419 2.364324 CAACCGGCTGGCTATAACTAGA 59.636 50.000 12.89 0.00 39.70 2.43
2302 2420 2.890814 ACCGGCTGGCTATAACTAGAT 58.109 47.619 12.89 0.00 39.70 1.98
2303 2421 4.043608 ACCGGCTGGCTATAACTAGATA 57.956 45.455 12.89 0.00 39.70 1.98
2304 2422 4.017808 ACCGGCTGGCTATAACTAGATAG 58.982 47.826 12.89 0.00 39.70 2.08
2305 2423 3.381908 CCGGCTGGCTATAACTAGATAGG 59.618 52.174 0.00 0.00 31.15 2.57
2306 2424 3.381908 CGGCTGGCTATAACTAGATAGGG 59.618 52.174 0.00 0.00 31.15 3.53
2307 2425 4.611367 GGCTGGCTATAACTAGATAGGGA 58.389 47.826 0.00 0.00 31.15 4.20
2308 2426 5.212745 GGCTGGCTATAACTAGATAGGGAT 58.787 45.833 0.00 0.00 31.15 3.85
2309 2427 6.374588 GGCTGGCTATAACTAGATAGGGATA 58.625 44.000 0.00 0.00 31.15 2.59
2310 2428 6.265876 GGCTGGCTATAACTAGATAGGGATAC 59.734 46.154 0.00 0.00 31.15 2.24
2311 2429 7.064229 GCTGGCTATAACTAGATAGGGATACT 58.936 42.308 0.00 0.00 31.15 2.12
2312 2430 8.219178 GCTGGCTATAACTAGATAGGGATACTA 58.781 40.741 0.00 0.00 35.80 1.82
2335 2453 8.574737 ACTAAATGTCTATCCTATTACACGACC 58.425 37.037 0.00 0.00 0.00 4.79
2336 2454 5.624344 ATGTCTATCCTATTACACGACCG 57.376 43.478 0.00 0.00 0.00 4.79
2337 2455 3.251729 TGTCTATCCTATTACACGACCGC 59.748 47.826 0.00 0.00 0.00 5.68
2338 2456 2.816087 TCTATCCTATTACACGACCGCC 59.184 50.000 0.00 0.00 0.00 6.13
2339 2457 1.405872 ATCCTATTACACGACCGCCA 58.594 50.000 0.00 0.00 0.00 5.69
2340 2458 1.405872 TCCTATTACACGACCGCCAT 58.594 50.000 0.00 0.00 0.00 4.40
2341 2459 1.338973 TCCTATTACACGACCGCCATC 59.661 52.381 0.00 0.00 0.00 3.51
2342 2460 1.604693 CCTATTACACGACCGCCATCC 60.605 57.143 0.00 0.00 0.00 3.51
2343 2461 1.067974 CTATTACACGACCGCCATCCA 59.932 52.381 0.00 0.00 0.00 3.41
2344 2462 0.250793 ATTACACGACCGCCATCCAA 59.749 50.000 0.00 0.00 0.00 3.53
2345 2463 0.035036 TTACACGACCGCCATCCAAA 59.965 50.000 0.00 0.00 0.00 3.28
2346 2464 0.671163 TACACGACCGCCATCCAAAC 60.671 55.000 0.00 0.00 0.00 2.93
2347 2465 2.359478 ACGACCGCCATCCAAACC 60.359 61.111 0.00 0.00 0.00 3.27
2348 2466 3.496131 CGACCGCCATCCAAACCG 61.496 66.667 0.00 0.00 0.00 4.44
2349 2467 3.131478 GACCGCCATCCAAACCGG 61.131 66.667 0.00 0.00 45.80 5.28
2351 2469 2.675075 CCGCCATCCAAACCGGTT 60.675 61.111 15.86 15.86 36.18 4.44
2352 2470 2.566010 CGCCATCCAAACCGGTTG 59.434 61.111 23.08 14.70 36.94 3.77
2353 2471 1.969064 CGCCATCCAAACCGGTTGA 60.969 57.895 23.08 15.50 39.87 3.18
2354 2472 1.519751 CGCCATCCAAACCGGTTGAA 61.520 55.000 23.08 9.90 39.87 2.69
2355 2473 0.676736 GCCATCCAAACCGGTTGAAA 59.323 50.000 23.08 9.50 39.87 2.69
2356 2474 1.069358 GCCATCCAAACCGGTTGAAAA 59.931 47.619 23.08 7.52 39.87 2.29
2357 2475 2.289382 GCCATCCAAACCGGTTGAAAAT 60.289 45.455 23.08 9.65 39.87 1.82
2358 2476 3.056465 GCCATCCAAACCGGTTGAAAATA 60.056 43.478 23.08 4.03 39.87 1.40
2359 2477 4.382577 GCCATCCAAACCGGTTGAAAATAT 60.383 41.667 23.08 6.33 39.87 1.28
2360 2478 5.348164 CCATCCAAACCGGTTGAAAATATC 58.652 41.667 23.08 0.00 39.87 1.63
2361 2479 5.348164 CATCCAAACCGGTTGAAAATATCC 58.652 41.667 23.08 0.00 39.87 2.59
2362 2480 3.764972 TCCAAACCGGTTGAAAATATCCC 59.235 43.478 23.08 0.00 39.87 3.85
2363 2481 3.428316 CCAAACCGGTTGAAAATATCCCG 60.428 47.826 23.08 0.00 39.87 5.14
2364 2482 3.353370 AACCGGTTGAAAATATCCCGA 57.647 42.857 21.56 0.00 41.08 5.14
2365 2483 2.914059 ACCGGTTGAAAATATCCCGAG 58.086 47.619 0.00 0.00 41.08 4.63
2366 2484 1.602377 CCGGTTGAAAATATCCCGAGC 59.398 52.381 0.00 0.00 41.08 5.03
2367 2485 2.561569 CGGTTGAAAATATCCCGAGCT 58.438 47.619 0.00 0.00 41.08 4.09
2368 2486 3.493699 CCGGTTGAAAATATCCCGAGCTA 60.494 47.826 0.00 0.00 41.08 3.32
2369 2487 3.493503 CGGTTGAAAATATCCCGAGCTAC 59.506 47.826 0.00 0.00 41.08 3.58
2370 2488 3.813724 GGTTGAAAATATCCCGAGCTACC 59.186 47.826 0.00 0.00 0.00 3.18
2371 2489 4.448210 GTTGAAAATATCCCGAGCTACCA 58.552 43.478 0.00 0.00 0.00 3.25
2372 2490 4.974645 TGAAAATATCCCGAGCTACCAT 57.025 40.909 0.00 0.00 0.00 3.55
2373 2491 4.894784 TGAAAATATCCCGAGCTACCATC 58.105 43.478 0.00 0.00 0.00 3.51
2374 2492 4.593206 TGAAAATATCCCGAGCTACCATCT 59.407 41.667 0.00 0.00 0.00 2.90
2375 2493 4.810191 AAATATCCCGAGCTACCATCTC 57.190 45.455 0.00 0.00 0.00 2.75
2376 2494 2.217510 TATCCCGAGCTACCATCTCC 57.782 55.000 0.00 0.00 0.00 3.71
2377 2495 0.543174 ATCCCGAGCTACCATCTCCC 60.543 60.000 0.00 0.00 0.00 4.30
2378 2496 1.457643 CCCGAGCTACCATCTCCCA 60.458 63.158 0.00 0.00 0.00 4.37
2379 2497 0.833834 CCCGAGCTACCATCTCCCAT 60.834 60.000 0.00 0.00 0.00 4.00
2380 2498 0.605589 CCGAGCTACCATCTCCCATC 59.394 60.000 0.00 0.00 0.00 3.51
2381 2499 0.242286 CGAGCTACCATCTCCCATCG 59.758 60.000 0.00 0.00 0.00 3.84
2382 2500 0.605589 GAGCTACCATCTCCCATCGG 59.394 60.000 0.00 0.00 0.00 4.18
2383 2501 0.833834 AGCTACCATCTCCCATCGGG 60.834 60.000 0.00 0.00 46.11 5.14
2384 2502 1.122019 GCTACCATCTCCCATCGGGT 61.122 60.000 0.00 0.00 44.74 5.28
2385 2503 1.826042 GCTACCATCTCCCATCGGGTA 60.826 57.143 0.00 0.00 44.74 3.69
2386 2504 2.171840 CTACCATCTCCCATCGGGTAG 58.828 57.143 0.00 0.00 44.74 3.18
2387 2505 0.561184 ACCATCTCCCATCGGGTAGA 59.439 55.000 0.00 1.72 44.74 2.59
2388 2506 1.150135 ACCATCTCCCATCGGGTAGAT 59.850 52.381 0.00 3.94 44.74 1.98
2397 2515 0.969894 ATCGGGTAGATGCAGTAGCC 59.030 55.000 14.44 14.44 41.13 3.93
2398 2516 0.396556 TCGGGTAGATGCAGTAGCCA 60.397 55.000 21.09 9.94 41.13 4.75
2399 2517 0.464036 CGGGTAGATGCAGTAGCCAA 59.536 55.000 21.09 0.00 41.13 4.52
2400 2518 1.134521 CGGGTAGATGCAGTAGCCAAA 60.135 52.381 21.09 0.00 41.13 3.28
2401 2519 2.289565 GGGTAGATGCAGTAGCCAAAC 58.710 52.381 18.01 0.00 41.13 2.93
2402 2520 1.933853 GGTAGATGCAGTAGCCAAACG 59.066 52.381 0.00 0.00 41.13 3.60
2403 2521 1.327764 GTAGATGCAGTAGCCAAACGC 59.672 52.381 0.00 0.00 41.13 4.84
2413 2531 4.351054 CCAAACGCTCCCTGGCCT 62.351 66.667 3.32 0.00 0.00 5.19
2414 2532 2.747855 CAAACGCTCCCTGGCCTC 60.748 66.667 3.32 0.00 0.00 4.70
2415 2533 4.035102 AAACGCTCCCTGGCCTCC 62.035 66.667 3.32 0.00 0.00 4.30
2430 2548 1.722677 CTCCGTCGGAGTGAGTAGC 59.277 63.158 29.66 0.00 44.25 3.58
2431 2549 2.037913 CTCCGTCGGAGTGAGTAGCG 62.038 65.000 29.66 5.10 44.25 4.26
2432 2550 2.104859 CCGTCGGAGTGAGTAGCGA 61.105 63.158 4.91 0.00 0.00 4.93
2433 2551 1.060622 CGTCGGAGTGAGTAGCGAC 59.939 63.158 0.00 0.00 0.00 5.19
2434 2552 1.428620 GTCGGAGTGAGTAGCGACC 59.571 63.158 0.00 0.00 0.00 4.79
2435 2553 1.002990 TCGGAGTGAGTAGCGACCA 60.003 57.895 0.00 0.00 0.00 4.02
2436 2554 1.136984 CGGAGTGAGTAGCGACCAC 59.863 63.158 9.46 9.46 0.00 4.16
2437 2555 1.583495 CGGAGTGAGTAGCGACCACA 61.583 60.000 16.49 6.02 32.33 4.17
2438 2556 0.818296 GGAGTGAGTAGCGACCACAT 59.182 55.000 16.49 6.07 32.33 3.21
2439 2557 2.022195 GGAGTGAGTAGCGACCACATA 58.978 52.381 16.49 0.00 32.33 2.29
2440 2558 2.223525 GGAGTGAGTAGCGACCACATAC 60.224 54.545 16.49 9.69 32.33 2.39
2441 2559 1.400846 AGTGAGTAGCGACCACATACG 59.599 52.381 16.49 0.00 32.33 3.06
2442 2560 0.736636 TGAGTAGCGACCACATACGG 59.263 55.000 0.00 0.00 0.00 4.02
2443 2561 1.019673 GAGTAGCGACCACATACGGA 58.980 55.000 0.00 0.00 0.00 4.69
2444 2562 1.607628 GAGTAGCGACCACATACGGAT 59.392 52.381 0.00 0.00 0.00 4.18
2445 2563 1.337071 AGTAGCGACCACATACGGATG 59.663 52.381 5.94 5.94 39.16 3.51
2446 2564 1.335810 GTAGCGACCACATACGGATGA 59.664 52.381 16.36 0.00 36.48 2.92
2447 2565 0.821517 AGCGACCACATACGGATGAA 59.178 50.000 16.36 0.00 36.48 2.57
2448 2566 0.928229 GCGACCACATACGGATGAAC 59.072 55.000 16.36 1.56 36.48 3.18
2449 2567 1.197055 CGACCACATACGGATGAACG 58.803 55.000 16.36 9.99 36.48 3.95
2450 2568 0.928229 GACCACATACGGATGAACGC 59.072 55.000 16.36 0.00 36.48 4.84
2451 2569 0.461339 ACCACATACGGATGAACGCC 60.461 55.000 16.36 0.00 36.48 5.68
2459 2577 4.778143 GATGAACGCCGTGGCCCT 62.778 66.667 5.08 0.00 37.98 5.19
2465 2583 4.473520 CGCCGTGGCCCTGAAGAT 62.474 66.667 5.08 0.00 37.98 2.40
2466 2584 2.908015 GCCGTGGCCCTGAAGATA 59.092 61.111 0.00 0.00 34.56 1.98
2467 2585 1.223487 GCCGTGGCCCTGAAGATAA 59.777 57.895 0.00 0.00 34.56 1.75
2468 2586 1.095807 GCCGTGGCCCTGAAGATAAC 61.096 60.000 0.00 0.00 34.56 1.89
2469 2587 0.463833 CCGTGGCCCTGAAGATAACC 60.464 60.000 0.00 0.00 0.00 2.85
2470 2588 0.541863 CGTGGCCCTGAAGATAACCT 59.458 55.000 0.00 0.00 0.00 3.50
2471 2589 1.743772 CGTGGCCCTGAAGATAACCTG 60.744 57.143 0.00 0.00 0.00 4.00
2472 2590 0.255890 TGGCCCTGAAGATAACCTGC 59.744 55.000 0.00 0.00 0.00 4.85
2473 2591 0.255890 GGCCCTGAAGATAACCTGCA 59.744 55.000 0.00 0.00 0.00 4.41
2474 2592 1.340991 GGCCCTGAAGATAACCTGCAA 60.341 52.381 0.00 0.00 27.65 4.08
2475 2593 2.446435 GCCCTGAAGATAACCTGCAAA 58.554 47.619 0.00 0.00 27.65 3.68
2476 2594 2.825532 GCCCTGAAGATAACCTGCAAAA 59.174 45.455 0.00 0.00 27.65 2.44
2477 2595 3.258123 GCCCTGAAGATAACCTGCAAAAA 59.742 43.478 0.00 0.00 27.65 1.94
2478 2596 4.619160 GCCCTGAAGATAACCTGCAAAAAG 60.619 45.833 0.00 0.00 27.65 2.27
2479 2597 4.524328 CCCTGAAGATAACCTGCAAAAAGT 59.476 41.667 0.00 0.00 27.65 2.66
2480 2598 5.710099 CCCTGAAGATAACCTGCAAAAAGTA 59.290 40.000 0.00 0.00 27.65 2.24
2481 2599 6.208599 CCCTGAAGATAACCTGCAAAAAGTAA 59.791 38.462 0.00 0.00 27.65 2.24
2482 2600 7.255801 CCCTGAAGATAACCTGCAAAAAGTAAA 60.256 37.037 0.00 0.00 27.65 2.01
2483 2601 8.306761 CCTGAAGATAACCTGCAAAAAGTAAAT 58.693 33.333 0.00 0.00 27.65 1.40
2484 2602 9.132521 CTGAAGATAACCTGCAAAAAGTAAATG 57.867 33.333 0.00 0.00 27.65 2.32
2485 2603 8.087750 TGAAGATAACCTGCAAAAAGTAAATGG 58.912 33.333 0.00 0.00 0.00 3.16
2486 2604 7.539034 AGATAACCTGCAAAAAGTAAATGGT 57.461 32.000 0.00 0.00 0.00 3.55
2487 2605 7.962441 AGATAACCTGCAAAAAGTAAATGGTT 58.038 30.769 5.22 5.22 39.49 3.67
2488 2606 7.872483 AGATAACCTGCAAAAAGTAAATGGTTG 59.128 33.333 9.27 0.00 37.18 3.77
2489 2607 5.351948 ACCTGCAAAAAGTAAATGGTTGT 57.648 34.783 0.00 0.00 0.00 3.32
2490 2608 5.739959 ACCTGCAAAAAGTAAATGGTTGTT 58.260 33.333 0.00 0.00 0.00 2.83
2491 2609 5.584251 ACCTGCAAAAAGTAAATGGTTGTTG 59.416 36.000 0.00 0.00 0.00 3.33
2492 2610 5.814705 CCTGCAAAAAGTAAATGGTTGTTGA 59.185 36.000 0.00 0.00 0.00 3.18
2493 2611 6.482973 CCTGCAAAAAGTAAATGGTTGTTGAT 59.517 34.615 0.00 0.00 0.00 2.57
2494 2612 7.307337 CCTGCAAAAAGTAAATGGTTGTTGATC 60.307 37.037 0.00 0.00 0.00 2.92
2495 2613 6.199908 TGCAAAAAGTAAATGGTTGTTGATCG 59.800 34.615 0.00 0.00 0.00 3.69
2496 2614 6.346518 GCAAAAAGTAAATGGTTGTTGATCGG 60.347 38.462 0.00 0.00 0.00 4.18
2497 2615 6.399639 AAAAGTAAATGGTTGTTGATCGGT 57.600 33.333 0.00 0.00 0.00 4.69
2498 2616 6.399639 AAAGTAAATGGTTGTTGATCGGTT 57.600 33.333 0.00 0.00 0.00 4.44
2499 2617 7.513371 AAAGTAAATGGTTGTTGATCGGTTA 57.487 32.000 0.00 0.00 0.00 2.85
2500 2618 7.513371 AAGTAAATGGTTGTTGATCGGTTAA 57.487 32.000 0.00 0.00 0.00 2.01
2501 2619 7.513371 AGTAAATGGTTGTTGATCGGTTAAA 57.487 32.000 0.00 0.00 0.00 1.52
2502 2620 7.590279 AGTAAATGGTTGTTGATCGGTTAAAG 58.410 34.615 0.00 0.00 0.00 1.85
2503 2621 6.642707 AAATGGTTGTTGATCGGTTAAAGA 57.357 33.333 0.00 0.00 0.00 2.52
2504 2622 5.622770 ATGGTTGTTGATCGGTTAAAGAC 57.377 39.130 0.00 0.00 0.00 3.01
2505 2623 4.710324 TGGTTGTTGATCGGTTAAAGACT 58.290 39.130 0.00 0.00 0.00 3.24
2506 2624 5.856156 TGGTTGTTGATCGGTTAAAGACTA 58.144 37.500 0.00 0.00 0.00 2.59
2507 2625 6.289834 TGGTTGTTGATCGGTTAAAGACTAA 58.710 36.000 0.00 0.00 0.00 2.24
2508 2626 6.425721 TGGTTGTTGATCGGTTAAAGACTAAG 59.574 38.462 0.00 0.00 0.00 2.18
2509 2627 6.426025 GGTTGTTGATCGGTTAAAGACTAAGT 59.574 38.462 0.00 0.00 0.00 2.24
2510 2628 7.359849 GGTTGTTGATCGGTTAAAGACTAAGTC 60.360 40.741 0.00 0.00 0.00 3.01
2511 2629 6.751157 TGTTGATCGGTTAAAGACTAAGTCA 58.249 36.000 0.00 0.00 34.60 3.41
2512 2630 7.383687 TGTTGATCGGTTAAAGACTAAGTCAT 58.616 34.615 0.00 0.00 34.60 3.06
2513 2631 7.876068 TGTTGATCGGTTAAAGACTAAGTCATT 59.124 33.333 0.00 0.00 34.60 2.57
2514 2632 8.718734 GTTGATCGGTTAAAGACTAAGTCATTT 58.281 33.333 0.00 0.00 34.60 2.32
2515 2633 8.475331 TGATCGGTTAAAGACTAAGTCATTTC 57.525 34.615 0.00 0.00 34.60 2.17
2516 2634 8.311836 TGATCGGTTAAAGACTAAGTCATTTCT 58.688 33.333 0.00 0.00 34.60 2.52
2517 2635 7.884816 TCGGTTAAAGACTAAGTCATTTCTG 57.115 36.000 0.00 0.00 34.60 3.02
2518 2636 6.367969 TCGGTTAAAGACTAAGTCATTTCTGC 59.632 38.462 0.00 0.00 34.60 4.26
2519 2637 6.147164 CGGTTAAAGACTAAGTCATTTCTGCA 59.853 38.462 0.00 0.00 34.60 4.41
2520 2638 7.522374 GGTTAAAGACTAAGTCATTTCTGCAG 58.478 38.462 7.63 7.63 34.60 4.41
2521 2639 7.173390 GGTTAAAGACTAAGTCATTTCTGCAGT 59.827 37.037 14.67 0.00 34.60 4.40
2522 2640 8.560374 GTTAAAGACTAAGTCATTTCTGCAGTT 58.440 33.333 14.67 0.83 34.60 3.16
2523 2641 6.793492 AAGACTAAGTCATTTCTGCAGTTC 57.207 37.500 14.67 0.00 34.60 3.01
2524 2642 5.241662 AGACTAAGTCATTTCTGCAGTTCC 58.758 41.667 14.67 0.00 34.60 3.62
2525 2643 4.973168 ACTAAGTCATTTCTGCAGTTCCA 58.027 39.130 14.67 0.00 0.00 3.53
2526 2644 5.564550 ACTAAGTCATTTCTGCAGTTCCAT 58.435 37.500 14.67 0.00 0.00 3.41
2527 2645 6.711277 ACTAAGTCATTTCTGCAGTTCCATA 58.289 36.000 14.67 0.00 0.00 2.74
2528 2646 7.341805 ACTAAGTCATTTCTGCAGTTCCATAT 58.658 34.615 14.67 0.00 0.00 1.78
2529 2647 7.831193 ACTAAGTCATTTCTGCAGTTCCATATT 59.169 33.333 14.67 5.72 0.00 1.28
2530 2648 6.446781 AGTCATTTCTGCAGTTCCATATTG 57.553 37.500 14.67 2.24 0.00 1.90
2531 2649 5.039333 GTCATTTCTGCAGTTCCATATTGC 58.961 41.667 14.67 0.00 38.30 3.56
2532 2650 4.098349 TCATTTCTGCAGTTCCATATTGCC 59.902 41.667 14.67 0.00 37.03 4.52
2533 2651 2.057137 TCTGCAGTTCCATATTGCCC 57.943 50.000 14.67 0.00 37.03 5.36
2534 2652 1.284491 TCTGCAGTTCCATATTGCCCA 59.716 47.619 14.67 0.00 37.03 5.36
2535 2653 1.406539 CTGCAGTTCCATATTGCCCAC 59.593 52.381 5.25 0.00 37.03 4.61
2536 2654 1.272369 TGCAGTTCCATATTGCCCACA 60.272 47.619 0.00 0.00 37.03 4.17
2537 2655 1.824230 GCAGTTCCATATTGCCCACAA 59.176 47.619 0.00 0.00 40.87 3.33
2538 2656 2.233431 GCAGTTCCATATTGCCCACAAA 59.767 45.455 0.00 0.00 39.77 2.83
2539 2657 3.306641 GCAGTTCCATATTGCCCACAAAA 60.307 43.478 0.00 0.00 39.77 2.44
2540 2658 4.497300 CAGTTCCATATTGCCCACAAAAG 58.503 43.478 0.00 0.00 39.77 2.27
2541 2659 4.021192 CAGTTCCATATTGCCCACAAAAGT 60.021 41.667 0.00 0.00 39.77 2.66
2542 2660 4.021192 AGTTCCATATTGCCCACAAAAGTG 60.021 41.667 0.00 0.00 39.77 3.16
2543 2661 2.233431 TCCATATTGCCCACAAAAGTGC 59.767 45.455 0.00 0.00 39.77 4.40
2544 2662 2.028294 CCATATTGCCCACAAAAGTGCA 60.028 45.455 0.00 0.00 39.77 4.57
2545 2663 2.810439 TATTGCCCACAAAAGTGCAC 57.190 45.000 9.40 9.40 39.77 4.57
2546 2664 0.829333 ATTGCCCACAAAAGTGCACA 59.171 45.000 21.04 0.00 39.77 4.57
2547 2665 0.610174 TTGCCCACAAAAGTGCACAA 59.390 45.000 21.04 0.00 32.63 3.33
2548 2666 0.610174 TGCCCACAAAAGTGCACAAA 59.390 45.000 21.04 0.00 0.00 2.83
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
11 15 1.541310 GGTCCACCACGAGGATGACA 61.541 60.000 20.10 0.00 39.26 3.58
12 16 1.218316 GGTCCACCACGAGGATGAC 59.782 63.158 5.68 10.99 37.52 3.06
13 17 1.078528 AGGTCCACCACGAGGATGA 59.921 57.895 5.68 0.00 37.52 2.92
102 106 0.322816 ACCACAATCTGCATCCGCTT 60.323 50.000 0.00 0.00 39.64 4.68
217 221 3.357203 TCGAACTCCAGATCTAGCAACT 58.643 45.455 0.00 0.00 0.00 3.16
278 282 3.383185 CAGCAAAAGTGAAACCCTTACCA 59.617 43.478 0.00 0.00 37.80 3.25
345 349 0.322277 TCCTTACCTGAGCTCGACGT 60.322 55.000 9.64 7.28 0.00 4.34
356 360 2.816411 TGACGAATCACCTCCTTACCT 58.184 47.619 0.00 0.00 0.00 3.08
360 364 7.112779 AGAAAATAATGACGAATCACCTCCTT 58.887 34.615 0.00 0.00 37.79 3.36
395 399 3.941188 CTCCGGCACCACCACAGT 61.941 66.667 0.00 0.00 39.03 3.55
580 585 2.718747 TTACGTTGTGCCCGTCCCTG 62.719 60.000 0.00 0.00 39.60 4.45
620 635 2.699321 GGTACCTGTCCCCACTCTTATC 59.301 54.545 4.06 0.00 0.00 1.75
621 636 2.760581 GGTACCTGTCCCCACTCTTAT 58.239 52.381 4.06 0.00 0.00 1.73
622 637 2.242882 GGTACCTGTCCCCACTCTTA 57.757 55.000 4.06 0.00 0.00 2.10
623 638 3.084191 GGTACCTGTCCCCACTCTT 57.916 57.895 4.06 0.00 0.00 2.85
638 655 0.817013 GAATGTGGACGTACGGGGTA 59.183 55.000 21.06 2.05 0.00 3.69
660 677 1.321474 ACGACCGTTAGTGGAGTTGA 58.679 50.000 0.00 0.00 0.00 3.18
661 678 2.485426 TCTACGACCGTTAGTGGAGTTG 59.515 50.000 0.00 0.00 0.00 3.16
662 679 2.485814 GTCTACGACCGTTAGTGGAGTT 59.514 50.000 0.00 0.00 0.00 3.01
663 680 2.079925 GTCTACGACCGTTAGTGGAGT 58.920 52.381 0.00 0.00 0.00 3.85
664 681 1.061711 CGTCTACGACCGTTAGTGGAG 59.938 57.143 0.00 0.00 43.02 3.86
665 682 1.078709 CGTCTACGACCGTTAGTGGA 58.921 55.000 0.00 0.00 43.02 4.02
682 699 1.134220 TCTGTTTGTGAAAGCTCCCGT 60.134 47.619 0.00 0.00 0.00 5.28
685 702 5.241662 AGTCTATCTGTTTGTGAAAGCTCC 58.758 41.667 0.00 0.00 0.00 4.70
696 713 5.140454 AGTTTGGGCAAAGTCTATCTGTTT 58.860 37.500 0.00 0.00 28.36 2.83
704 721 1.133668 AGCTGAGTTTGGGCAAAGTCT 60.134 47.619 4.45 1.44 45.99 3.24
705 722 1.000938 CAGCTGAGTTTGGGCAAAGTC 60.001 52.381 8.42 0.00 46.01 3.01
730 747 0.607489 GTTGCACCCTGATCTGCTGT 60.607 55.000 6.27 0.00 34.29 4.40
766 783 3.060138 TGCGACTGTACTTTGTAAAAGCG 60.060 43.478 0.00 0.00 0.00 4.68
767 784 4.455124 CTGCGACTGTACTTTGTAAAAGC 58.545 43.478 0.00 0.00 0.00 3.51
783 800 0.110056 CACCATTGTTCTGCTGCGAC 60.110 55.000 0.00 0.00 0.00 5.19
837 854 1.000163 TGTCGTTCTCTGCTCTGTTCC 60.000 52.381 0.00 0.00 0.00 3.62
862 886 1.539929 GCTGTGTTGTCTGTCTCTGCT 60.540 52.381 0.00 0.00 0.00 4.24
863 887 0.864455 GCTGTGTTGTCTGTCTCTGC 59.136 55.000 0.00 0.00 0.00 4.26
895 919 5.183331 TGCCTCAAGCTAGTAGTATATTCGG 59.817 44.000 0.00 0.00 44.23 4.30
1092 1130 4.394712 AAAGCCGAGTCAGCCCCG 62.395 66.667 0.00 0.00 0.00 5.73
1140 1178 1.445238 GAGCAGCGCGAAGAAGAGT 60.445 57.895 12.10 0.00 0.00 3.24
1643 1717 8.293157 TGAGCGTTTCAATCACATTTACAATAA 58.707 29.630 0.00 0.00 31.34 1.40
1644 1718 7.811653 TGAGCGTTTCAATCACATTTACAATA 58.188 30.769 0.00 0.00 31.34 1.90
1645 1719 6.676950 TGAGCGTTTCAATCACATTTACAAT 58.323 32.000 0.00 0.00 31.34 2.71
1646 1720 6.066054 TGAGCGTTTCAATCACATTTACAA 57.934 33.333 0.00 0.00 31.34 2.41
1664 1743 2.873170 TTTACACGAGCAATTGAGCG 57.127 45.000 10.34 13.73 40.15 5.03
1711 1790 9.013490 CAGCAAAATTGTTTACTCATAGTATGC 57.987 33.333 5.18 0.00 29.64 3.14
1748 1827 3.181459 TGACGGAGAATTGAACACTGGAA 60.181 43.478 0.00 0.00 0.00 3.53
1755 1834 2.348666 CGATGGTGACGGAGAATTGAAC 59.651 50.000 0.00 0.00 0.00 3.18
1767 1846 1.549170 ACCCTACTTGTCGATGGTGAC 59.451 52.381 0.00 0.00 39.37 3.67
1773 1859 1.411041 GGGCTACCCTACTTGTCGAT 58.589 55.000 0.00 0.00 41.34 3.59
1788 1874 3.735029 GACTCGACGTCACGGGCT 61.735 66.667 17.16 0.00 42.37 5.19
1809 1895 2.311463 AGTAGTCGTCCTCCATCCATG 58.689 52.381 0.00 0.00 0.00 3.66
1828 1914 2.731976 GTCGGTTGAACAGAGCAGTTAG 59.268 50.000 0.00 0.00 0.00 2.34
1829 1915 2.547218 GGTCGGTTGAACAGAGCAGTTA 60.547 50.000 19.77 0.00 39.86 2.24
1830 1916 1.583054 GTCGGTTGAACAGAGCAGTT 58.417 50.000 0.00 0.00 0.00 3.16
1836 1922 2.702592 AAAGTGGTCGGTTGAACAGA 57.297 45.000 0.00 0.00 44.04 3.41
1838 1924 3.003897 GCATAAAAGTGGTCGGTTGAACA 59.996 43.478 0.00 0.00 40.25 3.18
1876 1992 4.404507 AAATCGATATGCGGCACATTAC 57.595 40.909 4.03 0.00 40.38 1.89
1939 2056 8.531622 TGGTATTGCAGATACAAACATTTTTG 57.468 30.769 15.97 2.77 46.61 2.44
1999 2117 6.869388 GCTCTTATATTTCTTTACGGAGGGAG 59.131 42.308 0.00 0.00 0.00 4.30
2000 2118 6.516194 CGCTCTTATATTTCTTTACGGAGGGA 60.516 42.308 0.00 0.00 34.63 4.20
2001 2119 5.634020 CGCTCTTATATTTCTTTACGGAGGG 59.366 44.000 0.00 0.00 0.00 4.30
2002 2120 6.214399 ACGCTCTTATATTTCTTTACGGAGG 58.786 40.000 0.00 0.00 0.00 4.30
2003 2121 7.695869 AACGCTCTTATATTTCTTTACGGAG 57.304 36.000 0.00 0.00 0.00 4.63
2004 2122 9.241317 CTAAACGCTCTTATATTTCTTTACGGA 57.759 33.333 0.00 0.00 0.00 4.69
2005 2123 9.241317 TCTAAACGCTCTTATATTTCTTTACGG 57.759 33.333 0.00 0.00 0.00 4.02
2017 2135 8.922058 TCGTAAAGAAATCTAAACGCTCTTAT 57.078 30.769 10.80 0.00 35.50 1.73
2018 2136 8.746922 TTCGTAAAGAAATCTAAACGCTCTTA 57.253 30.769 10.80 0.00 35.61 2.10
2019 2137 7.148623 CCTTCGTAAAGAAATCTAAACGCTCTT 60.149 37.037 10.80 0.00 38.57 2.85
2020 2138 6.310711 CCTTCGTAAAGAAATCTAAACGCTCT 59.689 38.462 10.80 0.00 38.57 4.09
2021 2139 6.455246 CCCTTCGTAAAGAAATCTAAACGCTC 60.455 42.308 10.80 0.00 38.57 5.03
2022 2140 5.350640 CCCTTCGTAAAGAAATCTAAACGCT 59.649 40.000 10.80 0.00 38.57 5.07
2023 2141 5.349543 TCCCTTCGTAAAGAAATCTAAACGC 59.650 40.000 10.80 0.00 38.57 4.84
2024 2142 6.589139 ACTCCCTTCGTAAAGAAATCTAAACG 59.411 38.462 9.83 9.83 38.57 3.60
2025 2143 7.902387 ACTCCCTTCGTAAAGAAATCTAAAC 57.098 36.000 0.00 0.00 38.57 2.01
2026 2144 9.813446 GATACTCCCTTCGTAAAGAAATCTAAA 57.187 33.333 0.00 0.00 38.57 1.85
2027 2145 9.198475 AGATACTCCCTTCGTAAAGAAATCTAA 57.802 33.333 0.00 0.00 38.57 2.10
2028 2146 8.763984 AGATACTCCCTTCGTAAAGAAATCTA 57.236 34.615 0.00 0.00 38.57 1.98
2029 2147 7.663043 AGATACTCCCTTCGTAAAGAAATCT 57.337 36.000 0.00 0.00 38.57 2.40
2030 2148 9.984190 ATTAGATACTCCCTTCGTAAAGAAATC 57.016 33.333 0.00 0.00 38.57 2.17
2031 2149 9.765795 CATTAGATACTCCCTTCGTAAAGAAAT 57.234 33.333 0.00 0.00 38.57 2.17
2032 2150 8.974238 TCATTAGATACTCCCTTCGTAAAGAAA 58.026 33.333 0.00 0.00 38.57 2.52
2033 2151 8.529424 TCATTAGATACTCCCTTCGTAAAGAA 57.471 34.615 0.00 0.00 34.14 2.52
2034 2152 8.707796 ATCATTAGATACTCCCTTCGTAAAGA 57.292 34.615 0.00 0.00 31.12 2.52
2037 2155 8.467598 GCATATCATTAGATACTCCCTTCGTAA 58.532 37.037 0.00 0.00 39.43 3.18
2038 2156 7.614192 TGCATATCATTAGATACTCCCTTCGTA 59.386 37.037 0.00 0.00 39.43 3.43
2039 2157 6.437477 TGCATATCATTAGATACTCCCTTCGT 59.563 38.462 0.00 0.00 39.43 3.85
2040 2158 6.867550 TGCATATCATTAGATACTCCCTTCG 58.132 40.000 0.00 0.00 39.43 3.79
2041 2159 9.678260 AAATGCATATCATTAGATACTCCCTTC 57.322 33.333 0.00 0.00 44.23 3.46
2042 2160 9.458727 CAAATGCATATCATTAGATACTCCCTT 57.541 33.333 0.00 0.00 44.23 3.95
2043 2161 8.051535 CCAAATGCATATCATTAGATACTCCCT 58.948 37.037 0.00 0.00 44.23 4.20
2044 2162 7.831193 ACCAAATGCATATCATTAGATACTCCC 59.169 37.037 0.00 0.00 44.23 4.30
2045 2163 8.798859 ACCAAATGCATATCATTAGATACTCC 57.201 34.615 0.00 0.00 44.23 3.85
2118 2236 4.247380 GATGCAGAGGCCGGGGAG 62.247 72.222 2.18 0.00 40.13 4.30
2120 2238 4.559063 CTGATGCAGAGGCCGGGG 62.559 72.222 2.18 0.00 40.13 5.73
2121 2239 2.541547 TTTCTGATGCAGAGGCCGGG 62.542 60.000 2.18 0.00 41.75 5.73
2122 2240 1.078214 TTTCTGATGCAGAGGCCGG 60.078 57.895 0.00 0.00 41.75 6.13
2123 2241 0.107993 TCTTTCTGATGCAGAGGCCG 60.108 55.000 0.00 0.00 41.75 6.13
2124 2242 1.948145 CATCTTTCTGATGCAGAGGCC 59.052 52.381 0.00 0.00 44.96 5.19
2133 2251 4.406648 TGGTCGTATGCATCTTTCTGAT 57.593 40.909 0.19 0.00 35.40 2.90
2134 2252 3.885724 TGGTCGTATGCATCTTTCTGA 57.114 42.857 0.19 0.00 0.00 3.27
2135 2253 4.375272 AGATGGTCGTATGCATCTTTCTG 58.625 43.478 0.19 0.00 31.04 3.02
2136 2254 4.679373 AGATGGTCGTATGCATCTTTCT 57.321 40.909 0.19 0.00 31.04 2.52
2137 2255 7.426929 AATAAGATGGTCGTATGCATCTTTC 57.573 36.000 17.61 0.00 42.34 2.62
2138 2256 8.902540 TTAATAAGATGGTCGTATGCATCTTT 57.097 30.769 17.61 8.12 42.34 2.52
2139 2257 9.507329 AATTAATAAGATGGTCGTATGCATCTT 57.493 29.630 16.95 16.95 43.93 2.40
2140 2258 8.939929 CAATTAATAAGATGGTCGTATGCATCT 58.060 33.333 0.19 0.00 36.10 2.90
2141 2259 8.935844 TCAATTAATAAGATGGTCGTATGCATC 58.064 33.333 0.19 0.00 0.00 3.91
2142 2260 8.846943 TCAATTAATAAGATGGTCGTATGCAT 57.153 30.769 3.79 3.79 0.00 3.96
2143 2261 8.669946 TTCAATTAATAAGATGGTCGTATGCA 57.330 30.769 0.00 0.00 0.00 3.96
2160 2278 9.853555 CATGTTGGCACTACTTTATTCAATTAA 57.146 29.630 0.00 0.00 0.00 1.40
2161 2279 8.465999 CCATGTTGGCACTACTTTATTCAATTA 58.534 33.333 0.00 0.00 0.00 1.40
2162 2280 7.039082 ACCATGTTGGCACTACTTTATTCAATT 60.039 33.333 0.00 0.00 42.67 2.32
2163 2281 6.437162 ACCATGTTGGCACTACTTTATTCAAT 59.563 34.615 0.00 0.00 42.67 2.57
2164 2282 5.772672 ACCATGTTGGCACTACTTTATTCAA 59.227 36.000 0.00 0.00 42.67 2.69
2165 2283 5.321102 ACCATGTTGGCACTACTTTATTCA 58.679 37.500 0.00 0.00 42.67 2.57
2166 2284 5.897377 ACCATGTTGGCACTACTTTATTC 57.103 39.130 0.00 0.00 42.67 1.75
2167 2285 6.266558 TCAAACCATGTTGGCACTACTTTATT 59.733 34.615 0.00 0.00 42.67 1.40
2168 2286 5.772672 TCAAACCATGTTGGCACTACTTTAT 59.227 36.000 0.00 0.00 42.67 1.40
2169 2287 5.133941 TCAAACCATGTTGGCACTACTTTA 58.866 37.500 0.00 0.00 42.67 1.85
2170 2288 3.957497 TCAAACCATGTTGGCACTACTTT 59.043 39.130 0.00 0.00 42.67 2.66
2171 2289 3.561143 TCAAACCATGTTGGCACTACTT 58.439 40.909 0.00 0.00 42.67 2.24
2172 2290 3.222173 TCAAACCATGTTGGCACTACT 57.778 42.857 0.00 0.00 42.67 2.57
2173 2291 4.298332 CTTTCAAACCATGTTGGCACTAC 58.702 43.478 0.00 0.00 42.67 2.73
2174 2292 3.320541 CCTTTCAAACCATGTTGGCACTA 59.679 43.478 0.00 0.00 42.67 2.74
2175 2293 2.102925 CCTTTCAAACCATGTTGGCACT 59.897 45.455 0.00 0.00 42.67 4.40
2176 2294 2.158971 ACCTTTCAAACCATGTTGGCAC 60.159 45.455 0.00 0.00 42.67 5.01
2177 2295 2.102252 GACCTTTCAAACCATGTTGGCA 59.898 45.455 0.00 0.00 42.67 4.92
2178 2296 2.365293 AGACCTTTCAAACCATGTTGGC 59.635 45.455 0.00 0.00 42.67 4.52
2179 2297 4.099266 TGAAGACCTTTCAAACCATGTTGG 59.901 41.667 0.00 0.00 45.02 3.77
2180 2298 5.261209 TGAAGACCTTTCAAACCATGTTG 57.739 39.130 0.00 0.00 0.00 3.33
2181 2299 5.930837 TTGAAGACCTTTCAAACCATGTT 57.069 34.783 0.19 0.00 35.69 2.71
2182 2300 5.930837 TTTGAAGACCTTTCAAACCATGT 57.069 34.783 10.14 0.00 41.74 3.21
2183 2301 6.340522 ACTTTTGAAGACCTTTCAAACCATG 58.659 36.000 12.98 7.84 44.94 3.66
2184 2302 6.544928 ACTTTTGAAGACCTTTCAAACCAT 57.455 33.333 12.98 1.99 44.94 3.55
2185 2303 5.993748 ACTTTTGAAGACCTTTCAAACCA 57.006 34.783 12.98 1.90 44.94 3.67
2193 2311 9.529325 GTGCTTTTTATTACTTTTGAAGACCTT 57.471 29.630 0.00 0.00 0.00 3.50
2194 2312 8.691797 TGTGCTTTTTATTACTTTTGAAGACCT 58.308 29.630 0.00 0.00 0.00 3.85
2195 2313 8.865590 TGTGCTTTTTATTACTTTTGAAGACC 57.134 30.769 0.00 0.00 0.00 3.85
2200 2318 9.980780 GCTTTTTGTGCTTTTTATTACTTTTGA 57.019 25.926 0.00 0.00 0.00 2.69
2201 2319 9.986833 AGCTTTTTGTGCTTTTTATTACTTTTG 57.013 25.926 0.00 0.00 37.52 2.44
2203 2321 9.377312 TGAGCTTTTTGTGCTTTTTATTACTTT 57.623 25.926 0.00 0.00 41.30 2.66
2204 2322 8.817100 GTGAGCTTTTTGTGCTTTTTATTACTT 58.183 29.630 0.00 0.00 41.30 2.24
2205 2323 7.978975 TGTGAGCTTTTTGTGCTTTTTATTACT 59.021 29.630 0.00 0.00 41.30 2.24
2206 2324 8.055986 GTGTGAGCTTTTTGTGCTTTTTATTAC 58.944 33.333 0.00 0.00 41.30 1.89
2207 2325 7.761704 TGTGTGAGCTTTTTGTGCTTTTTATTA 59.238 29.630 0.00 0.00 41.30 0.98
2208 2326 6.593382 TGTGTGAGCTTTTTGTGCTTTTTATT 59.407 30.769 0.00 0.00 41.30 1.40
2209 2327 6.105333 TGTGTGAGCTTTTTGTGCTTTTTAT 58.895 32.000 0.00 0.00 41.30 1.40
2210 2328 5.473931 TGTGTGAGCTTTTTGTGCTTTTTA 58.526 33.333 0.00 0.00 41.30 1.52
2211 2329 4.314121 TGTGTGAGCTTTTTGTGCTTTTT 58.686 34.783 0.00 0.00 41.30 1.94
2212 2330 3.924144 TGTGTGAGCTTTTTGTGCTTTT 58.076 36.364 0.00 0.00 41.30 2.27
2213 2331 3.193267 TCTGTGTGAGCTTTTTGTGCTTT 59.807 39.130 0.00 0.00 41.30 3.51
2214 2332 2.754552 TCTGTGTGAGCTTTTTGTGCTT 59.245 40.909 0.00 0.00 41.30 3.91
2215 2333 2.357009 CTCTGTGTGAGCTTTTTGTGCT 59.643 45.455 0.00 0.00 44.24 4.40
2216 2334 2.724349 CTCTGTGTGAGCTTTTTGTGC 58.276 47.619 0.00 0.00 35.84 4.57
2226 2344 1.610102 CCCTCTTTGGCTCTGTGTGAG 60.610 57.143 0.00 0.00 45.33 3.51
2227 2345 0.397941 CCCTCTTTGGCTCTGTGTGA 59.602 55.000 0.00 0.00 0.00 3.58
2228 2346 2.938354 CCCTCTTTGGCTCTGTGTG 58.062 57.895 0.00 0.00 0.00 3.82
2237 2355 3.955471 TGATGTTTCTAGCCCTCTTTGG 58.045 45.455 0.00 0.00 0.00 3.28
2238 2356 5.006386 ACTTGATGTTTCTAGCCCTCTTTG 58.994 41.667 0.00 0.00 0.00 2.77
2239 2357 5.248380 ACTTGATGTTTCTAGCCCTCTTT 57.752 39.130 0.00 0.00 0.00 2.52
2240 2358 4.917906 ACTTGATGTTTCTAGCCCTCTT 57.082 40.909 0.00 0.00 0.00 2.85
2241 2359 4.141824 GCTACTTGATGTTTCTAGCCCTCT 60.142 45.833 0.00 0.00 0.00 3.69
2242 2360 4.123506 GCTACTTGATGTTTCTAGCCCTC 58.876 47.826 0.00 0.00 0.00 4.30
2243 2361 3.118223 GGCTACTTGATGTTTCTAGCCCT 60.118 47.826 3.05 0.00 39.56 5.19
2244 2362 3.206964 GGCTACTTGATGTTTCTAGCCC 58.793 50.000 3.05 0.00 39.56 5.19
2245 2363 3.873910 TGGCTACTTGATGTTTCTAGCC 58.126 45.455 7.01 7.01 43.51 3.93
2246 2364 5.880054 TTTGGCTACTTGATGTTTCTAGC 57.120 39.130 0.00 0.00 0.00 3.42
2267 2385 1.062845 CGGTTGTGGCGTCGTTTTT 59.937 52.632 0.00 0.00 0.00 1.94
2268 2386 2.710698 CGGTTGTGGCGTCGTTTT 59.289 55.556 0.00 0.00 0.00 2.43
2269 2387 3.273834 CCGGTTGTGGCGTCGTTT 61.274 61.111 0.00 0.00 0.00 3.60
2277 2395 0.107410 TTATAGCCAGCCGGTTGTGG 60.107 55.000 17.69 15.43 36.85 4.17
2278 2396 1.014352 GTTATAGCCAGCCGGTTGTG 58.986 55.000 17.69 9.73 33.28 3.33
2279 2397 0.909623 AGTTATAGCCAGCCGGTTGT 59.090 50.000 17.69 1.85 33.28 3.32
2280 2398 2.364324 TCTAGTTATAGCCAGCCGGTTG 59.636 50.000 11.98 11.98 33.28 3.77
2281 2399 2.674420 TCTAGTTATAGCCAGCCGGTT 58.326 47.619 1.90 0.00 33.28 4.44
2282 2400 2.376695 TCTAGTTATAGCCAGCCGGT 57.623 50.000 1.90 0.00 33.28 5.28
2283 2401 3.381908 CCTATCTAGTTATAGCCAGCCGG 59.618 52.174 0.00 0.00 0.00 6.13
2284 2402 3.381908 CCCTATCTAGTTATAGCCAGCCG 59.618 52.174 0.00 0.00 0.00 5.52
2285 2403 4.611367 TCCCTATCTAGTTATAGCCAGCC 58.389 47.826 0.00 0.00 0.00 4.85
2286 2404 7.064229 AGTATCCCTATCTAGTTATAGCCAGC 58.936 42.308 0.00 0.00 0.00 4.85
2309 2427 8.574737 GGTCGTGTAATAGGATAGACATTTAGT 58.425 37.037 0.00 0.00 0.00 2.24
2310 2428 7.749570 CGGTCGTGTAATAGGATAGACATTTAG 59.250 40.741 0.00 0.00 0.00 1.85
2311 2429 7.587629 CGGTCGTGTAATAGGATAGACATTTA 58.412 38.462 0.00 0.00 0.00 1.40
2312 2430 6.444633 CGGTCGTGTAATAGGATAGACATTT 58.555 40.000 0.00 0.00 0.00 2.32
2313 2431 5.564259 GCGGTCGTGTAATAGGATAGACATT 60.564 44.000 0.00 0.00 0.00 2.71
2314 2432 4.082895 GCGGTCGTGTAATAGGATAGACAT 60.083 45.833 0.00 0.00 0.00 3.06
2315 2433 3.251729 GCGGTCGTGTAATAGGATAGACA 59.748 47.826 0.00 0.00 0.00 3.41
2316 2434 3.365767 GGCGGTCGTGTAATAGGATAGAC 60.366 52.174 0.00 0.00 0.00 2.59
2317 2435 2.816087 GGCGGTCGTGTAATAGGATAGA 59.184 50.000 0.00 0.00 0.00 1.98
2318 2436 2.555325 TGGCGGTCGTGTAATAGGATAG 59.445 50.000 0.00 0.00 0.00 2.08
2319 2437 2.585330 TGGCGGTCGTGTAATAGGATA 58.415 47.619 0.00 0.00 0.00 2.59
2320 2438 1.405872 TGGCGGTCGTGTAATAGGAT 58.594 50.000 0.00 0.00 0.00 3.24
2321 2439 1.338973 GATGGCGGTCGTGTAATAGGA 59.661 52.381 0.00 0.00 0.00 2.94
2322 2440 1.604693 GGATGGCGGTCGTGTAATAGG 60.605 57.143 0.00 0.00 0.00 2.57
2323 2441 1.067974 TGGATGGCGGTCGTGTAATAG 59.932 52.381 0.00 0.00 0.00 1.73
2324 2442 1.112950 TGGATGGCGGTCGTGTAATA 58.887 50.000 0.00 0.00 0.00 0.98
2325 2443 0.250793 TTGGATGGCGGTCGTGTAAT 59.749 50.000 0.00 0.00 0.00 1.89
2326 2444 0.035036 TTTGGATGGCGGTCGTGTAA 59.965 50.000 0.00 0.00 0.00 2.41
2327 2445 0.671163 GTTTGGATGGCGGTCGTGTA 60.671 55.000 0.00 0.00 0.00 2.90
2328 2446 1.964373 GTTTGGATGGCGGTCGTGT 60.964 57.895 0.00 0.00 0.00 4.49
2329 2447 2.686816 GGTTTGGATGGCGGTCGTG 61.687 63.158 0.00 0.00 0.00 4.35
2330 2448 2.359478 GGTTTGGATGGCGGTCGT 60.359 61.111 0.00 0.00 0.00 4.34
2331 2449 3.496131 CGGTTTGGATGGCGGTCG 61.496 66.667 0.00 0.00 0.00 4.79
2332 2450 3.131478 CCGGTTTGGATGGCGGTC 61.131 66.667 0.00 0.00 42.00 4.79
2333 2451 3.501040 AACCGGTTTGGATGGCGGT 62.501 57.895 15.86 0.00 42.00 5.68
2334 2452 2.675075 AACCGGTTTGGATGGCGG 60.675 61.111 15.86 0.00 42.00 6.13
2335 2453 1.519751 TTCAACCGGTTTGGATGGCG 61.520 55.000 19.55 3.62 40.78 5.69
2336 2454 0.676736 TTTCAACCGGTTTGGATGGC 59.323 50.000 19.55 0.00 40.78 4.40
2337 2455 3.676291 ATTTTCAACCGGTTTGGATGG 57.324 42.857 19.55 5.30 40.78 3.51
2338 2456 5.348164 GGATATTTTCAACCGGTTTGGATG 58.652 41.667 19.55 7.05 41.73 3.51
2339 2457 4.404394 GGGATATTTTCAACCGGTTTGGAT 59.596 41.667 19.55 11.79 42.00 3.41
2340 2458 3.764972 GGGATATTTTCAACCGGTTTGGA 59.235 43.478 19.55 10.51 42.00 3.53
2341 2459 3.428316 CGGGATATTTTCAACCGGTTTGG 60.428 47.826 19.55 7.84 46.41 3.28
2342 2460 3.440872 TCGGGATATTTTCAACCGGTTTG 59.559 43.478 19.55 13.53 44.36 2.93
2343 2461 3.688235 TCGGGATATTTTCAACCGGTTT 58.312 40.909 19.55 5.23 44.36 3.27
2344 2462 3.275999 CTCGGGATATTTTCAACCGGTT 58.724 45.455 15.86 15.86 44.36 4.44
2345 2463 2.914059 CTCGGGATATTTTCAACCGGT 58.086 47.619 0.00 0.00 44.36 5.28
2346 2464 1.602377 GCTCGGGATATTTTCAACCGG 59.398 52.381 0.00 0.00 44.36 5.28
2347 2465 2.561569 AGCTCGGGATATTTTCAACCG 58.438 47.619 0.00 0.00 45.52 4.44
2348 2466 3.813724 GGTAGCTCGGGATATTTTCAACC 59.186 47.826 0.00 0.00 0.00 3.77
2349 2467 4.448210 TGGTAGCTCGGGATATTTTCAAC 58.552 43.478 0.00 0.00 0.00 3.18
2350 2468 4.764050 TGGTAGCTCGGGATATTTTCAA 57.236 40.909 0.00 0.00 0.00 2.69
2351 2469 4.593206 AGATGGTAGCTCGGGATATTTTCA 59.407 41.667 0.00 0.00 0.00 2.69
2352 2470 5.153950 AGATGGTAGCTCGGGATATTTTC 57.846 43.478 0.00 0.00 0.00 2.29
2353 2471 4.020128 GGAGATGGTAGCTCGGGATATTTT 60.020 45.833 0.00 0.00 33.19 1.82
2354 2472 3.515901 GGAGATGGTAGCTCGGGATATTT 59.484 47.826 0.00 0.00 33.19 1.40
2355 2473 3.100671 GGAGATGGTAGCTCGGGATATT 58.899 50.000 0.00 0.00 33.19 1.28
2356 2474 2.624557 GGGAGATGGTAGCTCGGGATAT 60.625 54.545 0.00 0.00 33.19 1.63
2357 2475 1.272536 GGGAGATGGTAGCTCGGGATA 60.273 57.143 0.00 0.00 33.19 2.59
2358 2476 0.543174 GGGAGATGGTAGCTCGGGAT 60.543 60.000 0.00 0.00 33.19 3.85
2359 2477 1.152525 GGGAGATGGTAGCTCGGGA 60.153 63.158 0.00 0.00 33.19 5.14
2360 2478 0.833834 ATGGGAGATGGTAGCTCGGG 60.834 60.000 0.00 0.00 33.19 5.14
2361 2479 0.605589 GATGGGAGATGGTAGCTCGG 59.394 60.000 0.00 0.00 33.19 4.63
2362 2480 0.242286 CGATGGGAGATGGTAGCTCG 59.758 60.000 0.00 0.00 33.19 5.03
2363 2481 0.605589 CCGATGGGAGATGGTAGCTC 59.394 60.000 0.00 0.00 34.06 4.09
2364 2482 2.751991 CCGATGGGAGATGGTAGCT 58.248 57.895 0.00 0.00 34.06 3.32
2365 2483 3.727455 CTACCCGATGGGAGATGGTAGC 61.727 59.091 9.30 0.00 46.90 3.58
2366 2484 2.171840 CTACCCGATGGGAGATGGTAG 58.828 57.143 9.30 0.00 46.90 3.18
2367 2485 2.304221 CTACCCGATGGGAGATGGTA 57.696 55.000 9.30 0.00 46.90 3.25
2368 2486 3.149436 CTACCCGATGGGAGATGGT 57.851 57.895 9.30 0.00 46.90 3.55
2378 2496 0.969894 GGCTACTGCATCTACCCGAT 59.030 55.000 0.00 0.00 41.91 4.18
2379 2497 0.396556 TGGCTACTGCATCTACCCGA 60.397 55.000 0.00 0.00 41.91 5.14
2380 2498 0.464036 TTGGCTACTGCATCTACCCG 59.536 55.000 0.00 0.00 41.91 5.28
2381 2499 2.289565 GTTTGGCTACTGCATCTACCC 58.710 52.381 0.00 0.00 41.91 3.69
2382 2500 1.933853 CGTTTGGCTACTGCATCTACC 59.066 52.381 0.00 0.00 41.91 3.18
2383 2501 1.327764 GCGTTTGGCTACTGCATCTAC 59.672 52.381 0.00 0.00 41.91 2.59
2384 2502 1.651987 GCGTTTGGCTACTGCATCTA 58.348 50.000 0.00 0.00 41.91 1.98
2385 2503 2.471255 GCGTTTGGCTACTGCATCT 58.529 52.632 0.00 0.00 41.91 2.90
2396 2514 4.351054 AGGCCAGGGAGCGTTTGG 62.351 66.667 5.01 0.00 35.06 3.28
2397 2515 2.747855 GAGGCCAGGGAGCGTTTG 60.748 66.667 5.01 0.00 0.00 2.93
2398 2516 4.035102 GGAGGCCAGGGAGCGTTT 62.035 66.667 5.01 0.00 0.00 3.60
2413 2531 2.104859 CGCTACTCACTCCGACGGA 61.105 63.158 17.28 17.28 0.00 4.69
2414 2532 2.104859 TCGCTACTCACTCCGACGG 61.105 63.158 7.84 7.84 0.00 4.79
2415 2533 1.060622 GTCGCTACTCACTCCGACG 59.939 63.158 0.00 0.00 40.27 5.12
2416 2534 1.303799 TGGTCGCTACTCACTCCGAC 61.304 60.000 3.68 3.68 46.60 4.79
2417 2535 1.002990 TGGTCGCTACTCACTCCGA 60.003 57.895 0.00 0.00 0.00 4.55
2418 2536 1.136984 GTGGTCGCTACTCACTCCG 59.863 63.158 3.71 0.00 0.00 4.63
2419 2537 0.818296 ATGTGGTCGCTACTCACTCC 59.182 55.000 10.01 0.00 31.73 3.85
2420 2538 2.539142 CGTATGTGGTCGCTACTCACTC 60.539 54.545 10.01 3.07 31.73 3.51
2421 2539 1.400846 CGTATGTGGTCGCTACTCACT 59.599 52.381 10.01 1.88 31.73 3.41
2422 2540 1.533338 CCGTATGTGGTCGCTACTCAC 60.533 57.143 3.91 3.91 0.00 3.51
2423 2541 0.736636 CCGTATGTGGTCGCTACTCA 59.263 55.000 0.00 0.00 0.00 3.41
2424 2542 1.019673 TCCGTATGTGGTCGCTACTC 58.980 55.000 0.00 0.00 0.00 2.59
2425 2543 1.337071 CATCCGTATGTGGTCGCTACT 59.663 52.381 0.00 0.00 0.00 2.57
2426 2544 1.335810 TCATCCGTATGTGGTCGCTAC 59.664 52.381 0.00 0.00 34.50 3.58
2427 2545 1.682740 TCATCCGTATGTGGTCGCTA 58.317 50.000 0.00 0.00 34.50 4.26
2428 2546 0.821517 TTCATCCGTATGTGGTCGCT 59.178 50.000 0.00 0.00 34.50 4.93
2429 2547 0.928229 GTTCATCCGTATGTGGTCGC 59.072 55.000 0.00 0.00 34.50 5.19
2430 2548 1.197055 CGTTCATCCGTATGTGGTCG 58.803 55.000 0.00 0.00 34.50 4.79
2431 2549 0.928229 GCGTTCATCCGTATGTGGTC 59.072 55.000 0.00 0.00 34.50 4.02
2432 2550 0.461339 GGCGTTCATCCGTATGTGGT 60.461 55.000 0.00 0.00 34.50 4.16
2433 2551 1.487452 CGGCGTTCATCCGTATGTGG 61.487 60.000 0.00 0.00 41.85 4.17
2434 2552 1.924335 CGGCGTTCATCCGTATGTG 59.076 57.895 0.00 0.00 41.85 3.21
2435 2553 4.412933 CGGCGTTCATCCGTATGT 57.587 55.556 0.00 0.00 41.85 2.29
2442 2560 4.778143 AGGGCCACGGCGTTCATC 62.778 66.667 11.19 0.35 43.06 2.92
2448 2566 2.587322 TTATCTTCAGGGCCACGGCG 62.587 60.000 6.18 4.80 43.06 6.46
2449 2567 1.095807 GTTATCTTCAGGGCCACGGC 61.096 60.000 6.18 0.00 41.06 5.68
2450 2568 0.463833 GGTTATCTTCAGGGCCACGG 60.464 60.000 6.18 0.00 0.00 4.94
2451 2569 0.541863 AGGTTATCTTCAGGGCCACG 59.458 55.000 6.18 0.00 0.00 4.94
2452 2570 2.019156 GCAGGTTATCTTCAGGGCCAC 61.019 57.143 6.18 0.00 0.00 5.01
2453 2571 0.255890 GCAGGTTATCTTCAGGGCCA 59.744 55.000 6.18 0.00 0.00 5.36
2454 2572 0.255890 TGCAGGTTATCTTCAGGGCC 59.744 55.000 0.00 0.00 0.00 5.80
2455 2573 2.128771 TTGCAGGTTATCTTCAGGGC 57.871 50.000 0.00 0.00 0.00 5.19
2456 2574 4.524328 ACTTTTTGCAGGTTATCTTCAGGG 59.476 41.667 0.00 0.00 0.00 4.45
2457 2575 5.712152 ACTTTTTGCAGGTTATCTTCAGG 57.288 39.130 0.00 0.00 0.00 3.86
2458 2576 9.132521 CATTTACTTTTTGCAGGTTATCTTCAG 57.867 33.333 0.00 0.00 0.00 3.02
2459 2577 8.087750 CCATTTACTTTTTGCAGGTTATCTTCA 58.912 33.333 0.00 0.00 0.00 3.02
2460 2578 8.088365 ACCATTTACTTTTTGCAGGTTATCTTC 58.912 33.333 0.00 0.00 0.00 2.87
2461 2579 7.962441 ACCATTTACTTTTTGCAGGTTATCTT 58.038 30.769 0.00 0.00 0.00 2.40
2462 2580 7.539034 ACCATTTACTTTTTGCAGGTTATCT 57.461 32.000 0.00 0.00 0.00 1.98
2463 2581 7.655732 ACAACCATTTACTTTTTGCAGGTTATC 59.344 33.333 0.00 0.00 36.43 1.75
2464 2582 7.505258 ACAACCATTTACTTTTTGCAGGTTAT 58.495 30.769 0.00 0.00 36.43 1.89
2465 2583 6.879400 ACAACCATTTACTTTTTGCAGGTTA 58.121 32.000 0.00 0.00 36.43 2.85
2466 2584 5.739959 ACAACCATTTACTTTTTGCAGGTT 58.260 33.333 0.00 0.00 38.55 3.50
2467 2585 5.351948 ACAACCATTTACTTTTTGCAGGT 57.648 34.783 0.00 0.00 0.00 4.00
2468 2586 5.814705 TCAACAACCATTTACTTTTTGCAGG 59.185 36.000 0.00 0.00 0.00 4.85
2469 2587 6.900568 TCAACAACCATTTACTTTTTGCAG 57.099 33.333 0.00 0.00 0.00 4.41
2470 2588 6.199908 CGATCAACAACCATTTACTTTTTGCA 59.800 34.615 0.00 0.00 0.00 4.08
2471 2589 6.346518 CCGATCAACAACCATTTACTTTTTGC 60.347 38.462 0.00 0.00 0.00 3.68
2472 2590 6.699642 ACCGATCAACAACCATTTACTTTTTG 59.300 34.615 0.00 0.00 0.00 2.44
2473 2591 6.811954 ACCGATCAACAACCATTTACTTTTT 58.188 32.000 0.00 0.00 0.00 1.94
2474 2592 6.399639 ACCGATCAACAACCATTTACTTTT 57.600 33.333 0.00 0.00 0.00 2.27
2475 2593 6.399639 AACCGATCAACAACCATTTACTTT 57.600 33.333 0.00 0.00 0.00 2.66
2476 2594 7.513371 TTAACCGATCAACAACCATTTACTT 57.487 32.000 0.00 0.00 0.00 2.24
2477 2595 7.446013 TCTTTAACCGATCAACAACCATTTACT 59.554 33.333 0.00 0.00 0.00 2.24
2478 2596 7.536281 GTCTTTAACCGATCAACAACCATTTAC 59.464 37.037 0.00 0.00 0.00 2.01
2479 2597 7.446013 AGTCTTTAACCGATCAACAACCATTTA 59.554 33.333 0.00 0.00 0.00 1.40
2480 2598 6.264518 AGTCTTTAACCGATCAACAACCATTT 59.735 34.615 0.00 0.00 0.00 2.32
2481 2599 5.768164 AGTCTTTAACCGATCAACAACCATT 59.232 36.000 0.00 0.00 0.00 3.16
2482 2600 5.313712 AGTCTTTAACCGATCAACAACCAT 58.686 37.500 0.00 0.00 0.00 3.55
2483 2601 4.710324 AGTCTTTAACCGATCAACAACCA 58.290 39.130 0.00 0.00 0.00 3.67
2484 2602 6.426025 ACTTAGTCTTTAACCGATCAACAACC 59.574 38.462 0.00 0.00 0.00 3.77
2485 2603 7.170320 TGACTTAGTCTTTAACCGATCAACAAC 59.830 37.037 13.86 0.00 33.15 3.32
2486 2604 7.211573 TGACTTAGTCTTTAACCGATCAACAA 58.788 34.615 13.86 0.00 33.15 2.83
2487 2605 6.751157 TGACTTAGTCTTTAACCGATCAACA 58.249 36.000 13.86 0.00 33.15 3.33
2488 2606 7.829378 ATGACTTAGTCTTTAACCGATCAAC 57.171 36.000 13.86 0.00 33.15 3.18
2489 2607 8.842358 AAATGACTTAGTCTTTAACCGATCAA 57.158 30.769 13.86 0.00 31.32 2.57
2490 2608 8.311836 AGAAATGACTTAGTCTTTAACCGATCA 58.688 33.333 13.86 0.00 31.32 2.92
2491 2609 8.596380 CAGAAATGACTTAGTCTTTAACCGATC 58.404 37.037 13.86 6.90 31.32 3.69
2492 2610 7.064728 GCAGAAATGACTTAGTCTTTAACCGAT 59.935 37.037 13.86 0.00 31.32 4.18
2493 2611 6.367969 GCAGAAATGACTTAGTCTTTAACCGA 59.632 38.462 13.86 0.00 31.32 4.69
2494 2612 6.147164 TGCAGAAATGACTTAGTCTTTAACCG 59.853 38.462 13.86 5.73 31.32 4.44
2495 2613 7.173390 ACTGCAGAAATGACTTAGTCTTTAACC 59.827 37.037 23.35 6.83 31.32 2.85
2496 2614 8.089115 ACTGCAGAAATGACTTAGTCTTTAAC 57.911 34.615 23.35 10.68 31.32 2.01
2497 2615 8.677148 AACTGCAGAAATGACTTAGTCTTTAA 57.323 30.769 23.35 0.00 31.32 1.52
2498 2616 7.387948 GGAACTGCAGAAATGACTTAGTCTTTA 59.612 37.037 23.35 0.00 31.32 1.85
2499 2617 6.205658 GGAACTGCAGAAATGACTTAGTCTTT 59.794 38.462 23.35 10.53 32.56 2.52
2500 2618 5.703130 GGAACTGCAGAAATGACTTAGTCTT 59.297 40.000 23.35 4.38 33.15 3.01
2501 2619 5.221722 TGGAACTGCAGAAATGACTTAGTCT 60.222 40.000 23.35 0.00 33.15 3.24
2502 2620 4.997395 TGGAACTGCAGAAATGACTTAGTC 59.003 41.667 23.35 5.27 0.00 2.59
2503 2621 4.973168 TGGAACTGCAGAAATGACTTAGT 58.027 39.130 23.35 0.00 0.00 2.24
2504 2622 7.798596 ATATGGAACTGCAGAAATGACTTAG 57.201 36.000 23.35 0.00 0.00 2.18
2505 2623 7.415541 GCAATATGGAACTGCAGAAATGACTTA 60.416 37.037 23.35 7.10 36.09 2.24
2506 2624 6.626623 GCAATATGGAACTGCAGAAATGACTT 60.627 38.462 23.35 1.15 36.09 3.01
2507 2625 5.163581 GCAATATGGAACTGCAGAAATGACT 60.164 40.000 23.35 1.04 36.09 3.41
2508 2626 5.039333 GCAATATGGAACTGCAGAAATGAC 58.961 41.667 23.35 4.75 36.09 3.06
2509 2627 4.098349 GGCAATATGGAACTGCAGAAATGA 59.902 41.667 23.35 0.78 37.83 2.57
2510 2628 4.365723 GGCAATATGGAACTGCAGAAATG 58.634 43.478 23.35 8.43 37.83 2.32
2511 2629 3.385755 GGGCAATATGGAACTGCAGAAAT 59.614 43.478 23.35 10.25 37.83 2.17
2512 2630 2.760092 GGGCAATATGGAACTGCAGAAA 59.240 45.455 23.35 2.58 37.83 2.52
2513 2631 2.291475 TGGGCAATATGGAACTGCAGAA 60.291 45.455 23.35 2.98 37.83 3.02
2514 2632 1.284491 TGGGCAATATGGAACTGCAGA 59.716 47.619 23.35 0.00 37.83 4.26
2515 2633 1.406539 GTGGGCAATATGGAACTGCAG 59.593 52.381 13.48 13.48 37.83 4.41
2516 2634 1.272369 TGTGGGCAATATGGAACTGCA 60.272 47.619 0.00 0.00 37.83 4.41
2517 2635 1.473258 TGTGGGCAATATGGAACTGC 58.527 50.000 0.00 0.00 35.28 4.40
2518 2636 4.021192 ACTTTTGTGGGCAATATGGAACTG 60.021 41.667 0.00 0.00 34.18 3.16
2519 2637 4.021192 CACTTTTGTGGGCAATATGGAACT 60.021 41.667 0.00 0.00 46.16 3.01
2520 2638 4.244862 CACTTTTGTGGGCAATATGGAAC 58.755 43.478 0.00 0.00 46.16 3.62
2521 2639 4.533919 CACTTTTGTGGGCAATATGGAA 57.466 40.909 0.00 0.00 46.16 3.53


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.