Multiple sequence alignment - TraesCS5B01G307900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G307900 chr5B 100.000 2978 0 0 1 2978 491043706 491040729 0.000000e+00 5500.0
1 TraesCS5B01G307900 chr5B 92.675 628 42 2 2351 2978 569825171 569824548 0.000000e+00 902.0
2 TraesCS5B01G307900 chr5B 97.107 484 14 0 1 484 681786558 681787041 0.000000e+00 817.0
3 TraesCS5B01G307900 chr5B 97.222 36 1 0 2268 2303 569825363 569825328 8.910000e-06 62.1
4 TraesCS5B01G307900 chr5D 94.621 1041 50 3 1001 2037 409013614 409012576 0.000000e+00 1607.0
5 TraesCS5B01G307900 chr5D 93.750 208 13 0 727 934 409014399 409014192 2.230000e-81 313.0
6 TraesCS5B01G307900 chr5D 87.984 258 18 1 487 731 409014958 409014701 2.900000e-75 292.0
7 TraesCS5B01G307900 chr5A 94.147 991 50 2 1001 1983 520117782 520116792 0.000000e+00 1502.0
8 TraesCS5B01G307900 chr5A 90.578 329 25 3 675 997 520118608 520118280 5.900000e-117 431.0
9 TraesCS5B01G307900 chr5A 87.209 86 5 2 574 656 520120041 520119959 3.160000e-15 93.5
10 TraesCS5B01G307900 chr1B 91.343 797 64 4 2183 2978 146118726 146117934 0.000000e+00 1085.0
11 TraesCS5B01G307900 chr6B 89.835 846 66 5 2134 2978 8236462 8237288 0.000000e+00 1068.0
12 TraesCS5B01G307900 chr6B 90.435 805 66 3 2183 2978 659591455 659592257 0.000000e+00 1050.0
13 TraesCS5B01G307900 chr6B 98.557 485 6 1 1 484 685335585 685336069 0.000000e+00 856.0
14 TraesCS5B01G307900 chr6B 98.344 483 8 0 1 483 461674652 461675134 0.000000e+00 848.0
15 TraesCS5B01G307900 chr6B 80.230 956 171 16 1001 1950 26015469 26016412 0.000000e+00 702.0
16 TraesCS5B01G307900 chr6B 92.913 127 9 0 2183 2309 18213563 18213689 5.070000e-43 185.0
17 TraesCS5B01G307900 chr2D 86.122 980 126 9 1001 1978 630621894 630622865 0.000000e+00 1048.0
18 TraesCS5B01G307900 chr2D 85.117 981 134 11 1001 1978 630098054 630097083 0.000000e+00 992.0
19 TraesCS5B01G307900 chr2D 81.601 962 166 11 1001 1958 629975685 629976639 0.000000e+00 785.0
20 TraesCS5B01G307900 chr3B 91.037 781 61 6 2183 2963 39651452 39650681 0.000000e+00 1046.0
21 TraesCS5B01G307900 chr3B 98.760 484 5 1 1 483 771386206 771386689 0.000000e+00 859.0
22 TraesCS5B01G307900 chr3B 83.333 120 18 2 2183 2301 144098994 144098876 3.140000e-20 110.0
23 TraesCS5B01G307900 chr2A 85.862 969 130 7 1001 1967 760762534 760763497 0.000000e+00 1024.0
24 TraesCS5B01G307900 chr2A 82.472 987 155 16 1001 1978 760775628 760774651 0.000000e+00 848.0
25 TraesCS5B01G307900 chr2B 85.434 968 136 5 1001 1967 773723663 773724626 0.000000e+00 1002.0
26 TraesCS5B01G307900 chr2B 97.942 486 8 2 1 485 53664933 53665417 0.000000e+00 841.0
27 TraesCS5B01G307900 chr4B 89.381 791 62 10 2183 2972 82596878 82596109 0.000000e+00 976.0
28 TraesCS5B01G307900 chr7B 88.125 800 68 7 2183 2978 552735835 552736611 0.000000e+00 926.0
29 TraesCS5B01G307900 chr7B 81.452 124 20 2 2179 2301 559007648 559007527 6.790000e-17 99.0
30 TraesCS5B01G307900 chr4A 88.306 744 60 15 2259 2978 727414334 727415074 0.000000e+00 867.0
31 TraesCS5B01G307900 chr4A 98.144 485 8 1 1 484 740222499 740222983 0.000000e+00 845.0
32 TraesCS5B01G307900 chr3A 97.938 485 9 1 1 484 49601914 49601430 0.000000e+00 839.0
33 TraesCS5B01G307900 chr3D 85.493 841 75 13 2183 2978 589431934 589431096 0.000000e+00 833.0
34 TraesCS5B01G307900 chr6D 87.399 746 66 10 2259 2978 16177871 16178614 0.000000e+00 832.0
35 TraesCS5B01G307900 chr7A 97.521 484 11 1 1 483 974312 974795 0.000000e+00 826.0
36 TraesCS5B01G307900 chr7A 96.901 484 13 1 1 484 17373161 17373642 0.000000e+00 809.0
37 TraesCS5B01G307900 chr7A 96.774 31 1 0 2135 2165 175867920 175867890 5.000000e-03 52.8
38 TraesCS5B01G307900 chrUn 100.000 31 0 0 2134 2164 34161039 34161009 1.150000e-04 58.4
39 TraesCS5B01G307900 chr7D 100.000 30 0 0 2136 2165 36452532 36452561 4.150000e-04 56.5


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G307900 chr5B 491040729 491043706 2977 True 5500.000000 5500 100.000000 1 2978 1 chr5B.!!$R1 2977
1 TraesCS5B01G307900 chr5B 569824548 569825363 815 True 482.050000 902 94.948500 2268 2978 2 chr5B.!!$R2 710
2 TraesCS5B01G307900 chr5D 409012576 409014958 2382 True 737.333333 1607 92.118333 487 2037 3 chr5D.!!$R1 1550
3 TraesCS5B01G307900 chr5A 520116792 520120041 3249 True 675.500000 1502 90.644667 574 1983 3 chr5A.!!$R1 1409
4 TraesCS5B01G307900 chr1B 146117934 146118726 792 True 1085.000000 1085 91.343000 2183 2978 1 chr1B.!!$R1 795
5 TraesCS5B01G307900 chr6B 8236462 8237288 826 False 1068.000000 1068 89.835000 2134 2978 1 chr6B.!!$F1 844
6 TraesCS5B01G307900 chr6B 659591455 659592257 802 False 1050.000000 1050 90.435000 2183 2978 1 chr6B.!!$F5 795
7 TraesCS5B01G307900 chr6B 26015469 26016412 943 False 702.000000 702 80.230000 1001 1950 1 chr6B.!!$F3 949
8 TraesCS5B01G307900 chr2D 630621894 630622865 971 False 1048.000000 1048 86.122000 1001 1978 1 chr2D.!!$F2 977
9 TraesCS5B01G307900 chr2D 630097083 630098054 971 True 992.000000 992 85.117000 1001 1978 1 chr2D.!!$R1 977
10 TraesCS5B01G307900 chr2D 629975685 629976639 954 False 785.000000 785 81.601000 1001 1958 1 chr2D.!!$F1 957
11 TraesCS5B01G307900 chr3B 39650681 39651452 771 True 1046.000000 1046 91.037000 2183 2963 1 chr3B.!!$R1 780
12 TraesCS5B01G307900 chr2A 760762534 760763497 963 False 1024.000000 1024 85.862000 1001 1967 1 chr2A.!!$F1 966
13 TraesCS5B01G307900 chr2A 760774651 760775628 977 True 848.000000 848 82.472000 1001 1978 1 chr2A.!!$R1 977
14 TraesCS5B01G307900 chr2B 773723663 773724626 963 False 1002.000000 1002 85.434000 1001 1967 1 chr2B.!!$F2 966
15 TraesCS5B01G307900 chr4B 82596109 82596878 769 True 976.000000 976 89.381000 2183 2972 1 chr4B.!!$R1 789
16 TraesCS5B01G307900 chr7B 552735835 552736611 776 False 926.000000 926 88.125000 2183 2978 1 chr7B.!!$F1 795
17 TraesCS5B01G307900 chr4A 727414334 727415074 740 False 867.000000 867 88.306000 2259 2978 1 chr4A.!!$F1 719
18 TraesCS5B01G307900 chr3D 589431096 589431934 838 True 833.000000 833 85.493000 2183 2978 1 chr3D.!!$R1 795
19 TraesCS5B01G307900 chr6D 16177871 16178614 743 False 832.000000 832 87.399000 2259 2978 1 chr6D.!!$F1 719

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
94 95 0.034896 GGAAGAGTTGAAGCACCGGA 59.965 55.0 9.46 0.0 0.0 5.14 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2069 4262 0.322322 ACGTAATCAACAAGGGCCGA 59.678 50.0 0.0 0.0 0.0 5.54 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 4.624364 TGCGGGCGGGCATCTATG 62.624 66.667 3.27 0.00 38.17 2.23
33 34 2.740055 GGCATCTATGGCCGCTCG 60.740 66.667 5.24 0.00 46.49 5.03
34 35 2.740055 GCATCTATGGCCGCTCGG 60.740 66.667 3.56 3.56 38.57 4.63
35 36 2.047844 CATCTATGGCCGCTCGGG 60.048 66.667 10.57 0.00 39.58 5.14
36 37 2.524394 ATCTATGGCCGCTCGGGT 60.524 61.111 10.57 0.00 38.44 5.28
37 38 2.872388 ATCTATGGCCGCTCGGGTG 61.872 63.158 10.57 0.00 38.44 4.61
38 39 4.609018 CTATGGCCGCTCGGGTGG 62.609 72.222 11.60 11.60 45.33 4.61
45 46 4.227134 CGCTCGGGTGGCATAGCT 62.227 66.667 10.81 0.00 32.73 3.32
46 47 2.590007 GCTCGGGTGGCATAGCTG 60.590 66.667 0.00 0.00 32.18 4.24
55 56 4.864334 GCATAGCTGCGGGTGGCT 62.864 66.667 7.69 0.34 44.05 4.75
56 57 2.898840 CATAGCTGCGGGTGGCTG 60.899 66.667 7.69 0.00 44.05 4.85
57 58 3.402681 ATAGCTGCGGGTGGCTGT 61.403 61.111 7.69 0.00 44.05 4.40
58 59 3.391665 ATAGCTGCGGGTGGCTGTC 62.392 63.158 7.69 0.00 44.05 3.51
81 82 3.839432 GGGGAGGCGACGGAAGAG 61.839 72.222 0.00 0.00 0.00 2.85
82 83 3.069318 GGGAGGCGACGGAAGAGT 61.069 66.667 0.00 0.00 0.00 3.24
83 84 2.647158 GGGAGGCGACGGAAGAGTT 61.647 63.158 0.00 0.00 0.00 3.01
84 85 1.446272 GGAGGCGACGGAAGAGTTG 60.446 63.158 0.00 0.00 0.00 3.16
85 86 1.585006 GAGGCGACGGAAGAGTTGA 59.415 57.895 0.00 0.00 0.00 3.18
86 87 0.038526 GAGGCGACGGAAGAGTTGAA 60.039 55.000 0.00 0.00 0.00 2.69
87 88 0.038159 AGGCGACGGAAGAGTTGAAG 60.038 55.000 0.00 0.00 0.00 3.02
88 89 1.627550 GGCGACGGAAGAGTTGAAGC 61.628 60.000 0.00 0.00 0.00 3.86
89 90 0.944311 GCGACGGAAGAGTTGAAGCA 60.944 55.000 0.00 0.00 0.00 3.91
90 91 0.784778 CGACGGAAGAGTTGAAGCAC 59.215 55.000 0.00 0.00 0.00 4.40
91 92 1.149148 GACGGAAGAGTTGAAGCACC 58.851 55.000 0.00 0.00 0.00 5.01
92 93 0.600255 ACGGAAGAGTTGAAGCACCG 60.600 55.000 0.00 0.00 43.61 4.94
93 94 1.291877 CGGAAGAGTTGAAGCACCGG 61.292 60.000 0.00 0.00 36.08 5.28
94 95 0.034896 GGAAGAGTTGAAGCACCGGA 59.965 55.000 9.46 0.00 0.00 5.14
95 96 1.433534 GAAGAGTTGAAGCACCGGAG 58.566 55.000 9.46 0.00 0.00 4.63
96 97 0.759346 AAGAGTTGAAGCACCGGAGT 59.241 50.000 9.46 0.00 0.00 3.85
97 98 1.629043 AGAGTTGAAGCACCGGAGTA 58.371 50.000 9.46 0.00 0.00 2.59
98 99 1.272769 AGAGTTGAAGCACCGGAGTAC 59.727 52.381 9.46 0.00 0.00 2.73
99 100 1.000506 GAGTTGAAGCACCGGAGTACA 59.999 52.381 9.46 0.00 0.00 2.90
100 101 1.623811 AGTTGAAGCACCGGAGTACAT 59.376 47.619 9.46 0.00 0.00 2.29
101 102 2.000447 GTTGAAGCACCGGAGTACATC 59.000 52.381 9.46 0.00 0.00 3.06
102 103 1.262417 TGAAGCACCGGAGTACATCA 58.738 50.000 9.46 1.54 0.00 3.07
103 104 1.067142 TGAAGCACCGGAGTACATCAC 60.067 52.381 9.46 0.00 0.00 3.06
104 105 1.204941 GAAGCACCGGAGTACATCACT 59.795 52.381 9.46 0.00 41.47 3.41
105 106 1.267121 AGCACCGGAGTACATCACTT 58.733 50.000 9.46 0.00 37.72 3.16
106 107 1.066858 AGCACCGGAGTACATCACTTG 60.067 52.381 9.46 0.00 37.72 3.16
107 108 1.359848 CACCGGAGTACATCACTTGC 58.640 55.000 9.46 0.00 37.72 4.01
108 109 0.249398 ACCGGAGTACATCACTTGCC 59.751 55.000 9.46 0.00 37.72 4.52
109 110 0.462047 CCGGAGTACATCACTTGCCC 60.462 60.000 0.00 0.00 37.72 5.36
110 111 0.249120 CGGAGTACATCACTTGCCCA 59.751 55.000 0.00 0.00 37.72 5.36
111 112 1.740380 CGGAGTACATCACTTGCCCAG 60.740 57.143 0.00 0.00 37.72 4.45
112 113 1.279271 GGAGTACATCACTTGCCCAGT 59.721 52.381 0.00 0.00 37.72 4.00
113 114 2.500098 GGAGTACATCACTTGCCCAGTA 59.500 50.000 0.00 0.00 37.72 2.74
114 115 3.522553 GAGTACATCACTTGCCCAGTAC 58.477 50.000 0.00 0.00 37.72 2.73
115 116 2.094182 AGTACATCACTTGCCCAGTACG 60.094 50.000 0.00 0.00 37.49 3.67
116 117 0.673644 ACATCACTTGCCCAGTACGC 60.674 55.000 0.00 0.00 32.76 4.42
117 118 1.447838 ATCACTTGCCCAGTACGCG 60.448 57.895 3.53 3.53 32.76 6.01
118 119 3.788766 CACTTGCCCAGTACGCGC 61.789 66.667 5.73 0.00 32.76 6.86
119 120 4.003788 ACTTGCCCAGTACGCGCT 62.004 61.111 5.73 0.00 31.97 5.92
120 121 3.188786 CTTGCCCAGTACGCGCTC 61.189 66.667 5.73 0.00 0.00 5.03
121 122 3.649277 CTTGCCCAGTACGCGCTCT 62.649 63.158 5.73 0.94 0.00 4.09
122 123 3.932580 TTGCCCAGTACGCGCTCTG 62.933 63.158 19.59 19.59 0.00 3.35
133 134 4.193334 CGCTCTGGCCGACGATGA 62.193 66.667 0.00 0.00 34.44 2.92
134 135 2.419198 GCTCTGGCCGACGATGAT 59.581 61.111 0.00 0.00 0.00 2.45
135 136 1.953138 GCTCTGGCCGACGATGATG 60.953 63.158 0.00 0.00 0.00 3.07
136 137 1.735973 CTCTGGCCGACGATGATGA 59.264 57.895 0.00 0.00 0.00 2.92
137 138 0.596083 CTCTGGCCGACGATGATGAC 60.596 60.000 0.00 0.00 0.00 3.06
138 139 1.946156 CTGGCCGACGATGATGACG 60.946 63.158 0.00 0.00 0.00 4.35
139 140 2.104331 GGCCGACGATGATGACGT 59.896 61.111 0.00 0.00 46.58 4.34
144 145 2.277949 ACGATGATGACGTCCGCG 60.278 61.111 14.12 11.48 39.87 6.46
145 146 3.024609 CGATGATGACGTCCGCGG 61.025 66.667 22.12 22.12 43.45 6.46
146 147 2.411701 GATGATGACGTCCGCGGA 59.588 61.111 27.28 27.28 43.45 5.54
147 148 1.944676 GATGATGACGTCCGCGGAC 60.945 63.158 41.75 41.75 43.45 4.79
155 156 4.988486 GTCCGCGGACGTCGTGTT 62.988 66.667 39.77 0.00 46.86 3.32
156 157 4.688419 TCCGCGGACGTCGTGTTC 62.688 66.667 27.28 0.00 46.86 3.18
158 159 4.695231 CGCGGACGTCGTGTTCCT 62.695 66.667 9.92 0.00 43.65 3.36
159 160 2.804090 GCGGACGTCGTGTTCCTC 60.804 66.667 9.92 0.00 41.72 3.71
160 161 2.126580 CGGACGTCGTGTTCCTCC 60.127 66.667 9.92 0.00 0.00 4.30
161 162 2.260743 GGACGTCGTGTTCCTCCC 59.739 66.667 9.92 0.00 0.00 4.30
162 163 2.273912 GGACGTCGTGTTCCTCCCT 61.274 63.158 9.92 0.00 0.00 4.20
163 164 1.080705 GACGTCGTGTTCCTCCCTG 60.081 63.158 0.63 0.00 0.00 4.45
164 165 2.432628 CGTCGTGTTCCTCCCTGC 60.433 66.667 0.00 0.00 0.00 4.85
165 166 2.741092 GTCGTGTTCCTCCCTGCA 59.259 61.111 0.00 0.00 0.00 4.41
166 167 1.374758 GTCGTGTTCCTCCCTGCAG 60.375 63.158 6.78 6.78 0.00 4.41
167 168 2.046892 CGTGTTCCTCCCTGCAGG 60.047 66.667 26.87 26.87 34.40 4.85
168 169 2.360475 GTGTTCCTCCCTGCAGGC 60.360 66.667 28.39 13.03 32.91 4.85
169 170 2.530151 TGTTCCTCCCTGCAGGCT 60.530 61.111 28.39 0.00 32.91 4.58
170 171 2.156098 TGTTCCTCCCTGCAGGCTT 61.156 57.895 28.39 0.00 32.91 4.35
171 172 1.377856 GTTCCTCCCTGCAGGCTTC 60.378 63.158 28.39 9.70 32.91 3.86
172 173 2.959484 TTCCTCCCTGCAGGCTTCG 61.959 63.158 28.39 13.92 32.91 3.79
173 174 3.710722 CCTCCCTGCAGGCTTCGT 61.711 66.667 28.39 0.00 34.51 3.85
174 175 2.125350 CTCCCTGCAGGCTTCGTC 60.125 66.667 28.39 0.00 34.51 4.20
175 176 3.997064 CTCCCTGCAGGCTTCGTCG 62.997 68.421 28.39 11.95 34.51 5.12
176 177 4.379243 CCCTGCAGGCTTCGTCGT 62.379 66.667 28.39 0.00 0.00 4.34
177 178 3.114616 CCTGCAGGCTTCGTCGTG 61.115 66.667 22.33 0.00 0.00 4.35
178 179 3.114616 CTGCAGGCTTCGTCGTGG 61.115 66.667 5.57 0.00 0.00 4.94
179 180 3.865929 CTGCAGGCTTCGTCGTGGT 62.866 63.158 5.57 0.00 0.00 4.16
180 181 3.414700 GCAGGCTTCGTCGTGGTG 61.415 66.667 0.00 0.00 0.00 4.17
181 182 3.414700 CAGGCTTCGTCGTGGTGC 61.415 66.667 0.00 0.00 0.00 5.01
182 183 3.616721 AGGCTTCGTCGTGGTGCT 61.617 61.111 0.00 0.00 0.00 4.40
183 184 3.112709 GGCTTCGTCGTGGTGCTC 61.113 66.667 0.00 0.00 0.00 4.26
184 185 3.112709 GCTTCGTCGTGGTGCTCC 61.113 66.667 0.00 0.00 0.00 4.70
185 186 2.651361 CTTCGTCGTGGTGCTCCT 59.349 61.111 6.34 0.00 34.23 3.69
186 187 1.006102 CTTCGTCGTGGTGCTCCTT 60.006 57.895 6.34 0.00 34.23 3.36
187 188 1.006571 TTCGTCGTGGTGCTCCTTC 60.007 57.895 6.34 0.00 34.23 3.46
188 189 1.461091 TTCGTCGTGGTGCTCCTTCT 61.461 55.000 6.34 0.00 34.23 2.85
189 190 1.444553 CGTCGTGGTGCTCCTTCTC 60.445 63.158 6.34 0.00 34.23 2.87
190 191 1.079750 GTCGTGGTGCTCCTTCTCC 60.080 63.158 6.34 0.00 34.23 3.71
191 192 1.228894 TCGTGGTGCTCCTTCTCCT 60.229 57.895 6.34 0.00 34.23 3.69
192 193 0.832135 TCGTGGTGCTCCTTCTCCTT 60.832 55.000 6.34 0.00 34.23 3.36
193 194 0.390472 CGTGGTGCTCCTTCTCCTTC 60.390 60.000 6.34 0.00 34.23 3.46
194 195 0.035915 GTGGTGCTCCTTCTCCTTCC 60.036 60.000 6.34 0.00 34.23 3.46
195 196 0.178891 TGGTGCTCCTTCTCCTTCCT 60.179 55.000 6.34 0.00 34.23 3.36
196 197 0.988063 GGTGCTCCTTCTCCTTCCTT 59.012 55.000 0.00 0.00 0.00 3.36
197 198 1.065782 GGTGCTCCTTCTCCTTCCTTC 60.066 57.143 0.00 0.00 0.00 3.46
198 199 1.905894 GTGCTCCTTCTCCTTCCTTCT 59.094 52.381 0.00 0.00 0.00 2.85
199 200 3.100671 GTGCTCCTTCTCCTTCCTTCTA 58.899 50.000 0.00 0.00 0.00 2.10
200 201 3.132111 GTGCTCCTTCTCCTTCCTTCTAG 59.868 52.174 0.00 0.00 0.00 2.43
201 202 2.102420 GCTCCTTCTCCTTCCTTCTAGC 59.898 54.545 0.00 0.00 0.00 3.42
202 203 3.642141 CTCCTTCTCCTTCCTTCTAGCT 58.358 50.000 0.00 0.00 0.00 3.32
203 204 3.636764 CTCCTTCTCCTTCCTTCTAGCTC 59.363 52.174 0.00 0.00 0.00 4.09
204 205 2.698274 CCTTCTCCTTCCTTCTAGCTCC 59.302 54.545 0.00 0.00 0.00 4.70
205 206 2.060050 TCTCCTTCCTTCTAGCTCCG 57.940 55.000 0.00 0.00 0.00 4.63
206 207 1.036707 CTCCTTCCTTCTAGCTCCGG 58.963 60.000 0.00 0.00 0.00 5.14
207 208 0.397254 TCCTTCCTTCTAGCTCCGGG 60.397 60.000 0.00 0.00 0.00 5.73
208 209 0.688087 CCTTCCTTCTAGCTCCGGGT 60.688 60.000 0.00 0.00 0.00 5.28
209 210 0.461961 CTTCCTTCTAGCTCCGGGTG 59.538 60.000 0.00 0.00 0.00 4.61
210 211 0.040646 TTCCTTCTAGCTCCGGGTGA 59.959 55.000 0.00 0.00 0.00 4.02
211 212 0.040646 TCCTTCTAGCTCCGGGTGAA 59.959 55.000 0.00 0.00 0.00 3.18
212 213 0.902531 CCTTCTAGCTCCGGGTGAAA 59.097 55.000 0.00 0.00 0.00 2.69
213 214 1.134670 CCTTCTAGCTCCGGGTGAAAG 60.135 57.143 0.00 0.00 0.00 2.62
214 215 0.249398 TTCTAGCTCCGGGTGAAAGC 59.751 55.000 0.00 1.97 36.27 3.51
216 217 0.250513 CTAGCTCCGGGTGAAAGCTT 59.749 55.000 18.60 0.00 43.67 3.74
217 218 0.036388 TAGCTCCGGGTGAAAGCTTG 60.036 55.000 18.60 0.00 43.67 4.01
218 219 1.302511 GCTCCGGGTGAAAGCTTGA 60.303 57.895 0.00 0.00 33.23 3.02
219 220 0.678048 GCTCCGGGTGAAAGCTTGAT 60.678 55.000 0.00 0.00 33.23 2.57
220 221 1.373570 CTCCGGGTGAAAGCTTGATC 58.626 55.000 0.00 0.00 0.00 2.92
221 222 0.984230 TCCGGGTGAAAGCTTGATCT 59.016 50.000 0.00 0.00 0.00 2.75
222 223 1.351017 TCCGGGTGAAAGCTTGATCTT 59.649 47.619 0.00 0.00 0.00 2.40
223 224 1.740025 CCGGGTGAAAGCTTGATCTTC 59.260 52.381 0.00 0.00 0.00 2.87
224 225 1.394917 CGGGTGAAAGCTTGATCTTCG 59.605 52.381 0.00 0.00 0.00 3.79
225 226 1.740025 GGGTGAAAGCTTGATCTTCGG 59.260 52.381 0.00 0.00 0.00 4.30
226 227 2.615493 GGGTGAAAGCTTGATCTTCGGA 60.615 50.000 0.00 0.00 0.00 4.55
227 228 3.274288 GGTGAAAGCTTGATCTTCGGAT 58.726 45.455 0.00 0.00 37.39 4.18
234 235 4.946411 GATCTTCGGATCGGACGG 57.054 61.111 1.88 0.00 40.97 4.79
235 236 2.031360 GATCTTCGGATCGGACGGT 58.969 57.895 1.88 0.00 40.97 4.83
236 237 0.317938 GATCTTCGGATCGGACGGTG 60.318 60.000 1.88 0.00 40.97 4.94
237 238 1.735376 ATCTTCGGATCGGACGGTGG 61.735 60.000 1.88 0.00 0.00 4.61
238 239 4.137872 TTCGGATCGGACGGTGGC 62.138 66.667 1.88 0.00 0.00 5.01
241 242 4.867599 GGATCGGACGGTGGCGAC 62.868 72.222 0.00 0.00 0.00 5.19
242 243 4.124351 GATCGGACGGTGGCGACA 62.124 66.667 0.00 0.00 38.70 4.35
243 244 3.426117 GATCGGACGGTGGCGACAT 62.426 63.158 0.00 0.00 46.14 3.06
244 245 2.901051 GATCGGACGGTGGCGACATT 62.901 60.000 0.00 0.00 46.14 2.71
245 246 2.901051 ATCGGACGGTGGCGACATTC 62.901 60.000 0.00 0.00 46.14 2.67
246 247 2.818274 GGACGGTGGCGACATTCC 60.818 66.667 0.00 0.00 46.14 3.01
249 250 3.487202 CGGTGGCGACATTCCGTG 61.487 66.667 11.99 0.00 43.04 4.94
250 251 3.124921 GGTGGCGACATTCCGTGG 61.125 66.667 0.00 0.00 46.14 4.94
251 252 2.358247 GTGGCGACATTCCGTGGT 60.358 61.111 0.00 0.00 46.14 4.16
252 253 2.047655 TGGCGACATTCCGTGGTC 60.048 61.111 0.00 0.00 33.40 4.02
257 258 3.040409 GACATTCCGTGGTCGTACC 57.960 57.895 0.00 0.00 39.22 3.34
258 259 0.459063 GACATTCCGTGGTCGTACCC 60.459 60.000 2.23 0.00 37.50 3.69
259 260 1.153509 CATTCCGTGGTCGTACCCC 60.154 63.158 2.23 0.00 37.50 4.95
260 261 1.305549 ATTCCGTGGTCGTACCCCT 60.306 57.895 2.23 0.00 37.50 4.79
261 262 0.906282 ATTCCGTGGTCGTACCCCTT 60.906 55.000 2.23 0.00 37.50 3.95
262 263 1.535204 TTCCGTGGTCGTACCCCTTC 61.535 60.000 2.23 0.00 37.50 3.46
263 264 1.980772 CCGTGGTCGTACCCCTTCT 60.981 63.158 2.23 0.00 37.50 2.85
264 265 1.538687 CCGTGGTCGTACCCCTTCTT 61.539 60.000 2.23 0.00 37.50 2.52
265 266 0.389426 CGTGGTCGTACCCCTTCTTG 60.389 60.000 2.23 0.00 37.50 3.02
266 267 0.036671 GTGGTCGTACCCCTTCTTGG 60.037 60.000 2.23 0.00 37.50 3.61
267 268 0.178926 TGGTCGTACCCCTTCTTGGA 60.179 55.000 2.23 0.00 37.50 3.53
268 269 0.535797 GGTCGTACCCCTTCTTGGAG 59.464 60.000 0.00 0.00 38.35 3.86
269 270 0.535797 GTCGTACCCCTTCTTGGAGG 59.464 60.000 0.00 0.00 38.35 4.30
270 271 1.221021 CGTACCCCTTCTTGGAGGC 59.779 63.158 0.00 0.00 38.35 4.70
271 272 1.550130 CGTACCCCTTCTTGGAGGCA 61.550 60.000 0.00 0.00 38.35 4.75
272 273 0.919710 GTACCCCTTCTTGGAGGCAT 59.080 55.000 0.00 0.00 38.35 4.40
273 274 1.285078 GTACCCCTTCTTGGAGGCATT 59.715 52.381 0.00 0.00 38.35 3.56
274 275 0.040204 ACCCCTTCTTGGAGGCATTG 59.960 55.000 0.00 0.00 38.35 2.82
275 276 0.040204 CCCCTTCTTGGAGGCATTGT 59.960 55.000 0.00 0.00 38.35 2.71
276 277 1.467920 CCCTTCTTGGAGGCATTGTC 58.532 55.000 0.00 0.00 38.35 3.18
277 278 1.005215 CCCTTCTTGGAGGCATTGTCT 59.995 52.381 0.00 0.00 38.35 3.41
278 279 2.556114 CCCTTCTTGGAGGCATTGTCTT 60.556 50.000 0.00 0.00 38.35 3.01
279 280 2.490903 CCTTCTTGGAGGCATTGTCTTG 59.509 50.000 0.00 0.00 38.35 3.02
280 281 2.205022 TCTTGGAGGCATTGTCTTGG 57.795 50.000 0.00 0.00 0.00 3.61
281 282 1.704628 TCTTGGAGGCATTGTCTTGGA 59.295 47.619 0.00 0.00 0.00 3.53
282 283 2.089980 CTTGGAGGCATTGTCTTGGAG 58.910 52.381 0.00 0.00 0.00 3.86
283 284 0.322816 TGGAGGCATTGTCTTGGAGC 60.323 55.000 0.00 0.00 0.00 4.70
284 285 1.034292 GGAGGCATTGTCTTGGAGCC 61.034 60.000 0.00 0.00 45.54 4.70
285 286 1.000396 AGGCATTGTCTTGGAGCCC 60.000 57.895 0.00 0.00 46.35 5.19
286 287 1.000396 GGCATTGTCTTGGAGCCCT 60.000 57.895 0.00 0.00 39.42 5.19
287 288 1.034292 GGCATTGTCTTGGAGCCCTC 61.034 60.000 0.00 0.00 39.42 4.30
288 289 1.372087 GCATTGTCTTGGAGCCCTCG 61.372 60.000 0.00 0.00 0.00 4.63
289 290 0.745845 CATTGTCTTGGAGCCCTCGG 60.746 60.000 0.00 0.00 0.00 4.63
290 291 1.201429 ATTGTCTTGGAGCCCTCGGT 61.201 55.000 0.00 0.00 0.00 4.69
291 292 1.827399 TTGTCTTGGAGCCCTCGGTC 61.827 60.000 0.00 0.00 35.68 4.79
310 311 4.295119 GGCGTGGTCCGTCACACT 62.295 66.667 0.00 0.00 41.97 3.55
311 312 2.279918 GCGTGGTCCGTCACACTT 60.280 61.111 0.00 0.00 39.32 3.16
312 313 2.308039 GCGTGGTCCGTCACACTTC 61.308 63.158 0.00 0.00 39.32 3.01
313 314 1.362717 CGTGGTCCGTCACACTTCT 59.637 57.895 0.00 0.00 37.50 2.85
314 315 0.249322 CGTGGTCCGTCACACTTCTT 60.249 55.000 0.00 0.00 37.50 2.52
315 316 1.499049 GTGGTCCGTCACACTTCTTC 58.501 55.000 0.00 0.00 37.57 2.87
316 317 0.391597 TGGTCCGTCACACTTCTTCC 59.608 55.000 0.00 0.00 0.00 3.46
317 318 0.320508 GGTCCGTCACACTTCTTCCC 60.321 60.000 0.00 0.00 0.00 3.97
318 319 0.666577 GTCCGTCACACTTCTTCCCG 60.667 60.000 0.00 0.00 0.00 5.14
319 320 1.374252 CCGTCACACTTCTTCCCGG 60.374 63.158 0.00 0.00 0.00 5.73
320 321 1.366366 CGTCACACTTCTTCCCGGT 59.634 57.895 0.00 0.00 0.00 5.28
321 322 0.249741 CGTCACACTTCTTCCCGGTT 60.250 55.000 0.00 0.00 0.00 4.44
322 323 1.509703 GTCACACTTCTTCCCGGTTC 58.490 55.000 0.00 0.00 0.00 3.62
323 324 1.124780 TCACACTTCTTCCCGGTTCA 58.875 50.000 0.00 0.00 0.00 3.18
324 325 1.697432 TCACACTTCTTCCCGGTTCAT 59.303 47.619 0.00 0.00 0.00 2.57
325 326 2.076863 CACACTTCTTCCCGGTTCATC 58.923 52.381 0.00 0.00 0.00 2.92
326 327 1.337823 ACACTTCTTCCCGGTTCATCG 60.338 52.381 0.00 0.00 0.00 3.84
333 334 2.591715 CCGGTTCATCGGGCATCC 60.592 66.667 0.00 0.00 45.78 3.51
334 335 2.505982 CGGTTCATCGGGCATCCT 59.494 61.111 0.00 0.00 0.00 3.24
335 336 1.889105 CGGTTCATCGGGCATCCTG 60.889 63.158 0.00 0.00 0.00 3.86
336 337 1.224592 GGTTCATCGGGCATCCTGT 59.775 57.895 0.00 0.00 0.00 4.00
337 338 1.097547 GGTTCATCGGGCATCCTGTG 61.098 60.000 0.00 0.00 0.00 3.66
338 339 1.097547 GTTCATCGGGCATCCTGTGG 61.098 60.000 0.00 0.00 0.00 4.17
339 340 2.203252 CATCGGGCATCCTGTGGG 60.203 66.667 0.00 0.00 0.00 4.61
340 341 3.492353 ATCGGGCATCCTGTGGGG 61.492 66.667 0.00 0.00 0.00 4.96
346 347 4.802051 CATCCTGTGGGGGCGTGG 62.802 72.222 0.00 0.00 35.33 4.94
348 349 3.935456 ATCCTGTGGGGGCGTGGTA 62.935 63.158 0.00 0.00 35.33 3.25
349 350 4.096003 CCTGTGGGGGCGTGGTAG 62.096 72.222 0.00 0.00 0.00 3.18
350 351 3.319198 CTGTGGGGGCGTGGTAGT 61.319 66.667 0.00 0.00 0.00 2.73
351 352 3.310860 CTGTGGGGGCGTGGTAGTC 62.311 68.421 0.00 0.00 0.00 2.59
352 353 4.446413 GTGGGGGCGTGGTAGTCG 62.446 72.222 0.00 0.00 0.00 4.18
354 355 3.698820 GGGGGCGTGGTAGTCGTT 61.699 66.667 0.00 0.00 0.00 3.85
355 356 2.433664 GGGGCGTGGTAGTCGTTG 60.434 66.667 0.00 0.00 0.00 4.10
356 357 2.652530 GGGCGTGGTAGTCGTTGA 59.347 61.111 0.00 0.00 0.00 3.18
357 358 1.445582 GGGCGTGGTAGTCGTTGAG 60.446 63.158 0.00 0.00 0.00 3.02
358 359 1.445582 GGCGTGGTAGTCGTTGAGG 60.446 63.158 0.00 0.00 0.00 3.86
359 360 1.445582 GCGTGGTAGTCGTTGAGGG 60.446 63.158 0.00 0.00 0.00 4.30
360 361 1.962144 CGTGGTAGTCGTTGAGGGT 59.038 57.895 0.00 0.00 0.00 4.34
361 362 0.388134 CGTGGTAGTCGTTGAGGGTG 60.388 60.000 0.00 0.00 0.00 4.61
362 363 0.677842 GTGGTAGTCGTTGAGGGTGT 59.322 55.000 0.00 0.00 0.00 4.16
363 364 0.677288 TGGTAGTCGTTGAGGGTGTG 59.323 55.000 0.00 0.00 0.00 3.82
364 365 0.677842 GGTAGTCGTTGAGGGTGTGT 59.322 55.000 0.00 0.00 0.00 3.72
365 366 1.604693 GGTAGTCGTTGAGGGTGTGTG 60.605 57.143 0.00 0.00 0.00 3.82
366 367 1.068127 GTAGTCGTTGAGGGTGTGTGT 59.932 52.381 0.00 0.00 0.00 3.72
367 368 0.104304 AGTCGTTGAGGGTGTGTGTC 59.896 55.000 0.00 0.00 0.00 3.67
368 369 1.066752 TCGTTGAGGGTGTGTGTCG 59.933 57.895 0.00 0.00 0.00 4.35
369 370 1.954146 CGTTGAGGGTGTGTGTCGG 60.954 63.158 0.00 0.00 0.00 4.79
370 371 1.145377 GTTGAGGGTGTGTGTCGGT 59.855 57.895 0.00 0.00 0.00 4.69
371 372 1.145156 TTGAGGGTGTGTGTCGGTG 59.855 57.895 0.00 0.00 0.00 4.94
372 373 2.665185 GAGGGTGTGTGTCGGTGC 60.665 66.667 0.00 0.00 0.00 5.01
373 374 4.250305 AGGGTGTGTGTCGGTGCC 62.250 66.667 0.00 0.00 0.00 5.01
385 386 4.740822 GGTGCCCGGCATCCTTGT 62.741 66.667 16.96 0.00 41.91 3.16
386 387 2.270850 GTGCCCGGCATCCTTGTA 59.729 61.111 16.96 0.00 41.91 2.41
387 388 1.152963 GTGCCCGGCATCCTTGTAT 60.153 57.895 16.96 0.00 41.91 2.29
388 389 1.148273 TGCCCGGCATCCTTGTATC 59.852 57.895 8.43 0.00 31.71 2.24
389 390 1.344953 TGCCCGGCATCCTTGTATCT 61.345 55.000 8.43 0.00 31.71 1.98
390 391 0.603975 GCCCGGCATCCTTGTATCTC 60.604 60.000 3.91 0.00 0.00 2.75
391 392 0.319900 CCCGGCATCCTTGTATCTCG 60.320 60.000 0.00 0.00 0.00 4.04
392 393 0.389391 CCGGCATCCTTGTATCTCGT 59.611 55.000 0.00 0.00 0.00 4.18
393 394 1.603172 CCGGCATCCTTGTATCTCGTC 60.603 57.143 0.00 0.00 0.00 4.20
394 395 1.338337 CGGCATCCTTGTATCTCGTCT 59.662 52.381 0.00 0.00 0.00 4.18
395 396 2.223829 CGGCATCCTTGTATCTCGTCTT 60.224 50.000 0.00 0.00 0.00 3.01
396 397 3.126831 GGCATCCTTGTATCTCGTCTTG 58.873 50.000 0.00 0.00 0.00 3.02
397 398 3.126831 GCATCCTTGTATCTCGTCTTGG 58.873 50.000 0.00 0.00 0.00 3.61
398 399 3.722147 CATCCTTGTATCTCGTCTTGGG 58.278 50.000 0.00 0.00 0.00 4.12
399 400 2.816411 TCCTTGTATCTCGTCTTGGGT 58.184 47.619 0.00 0.00 0.00 4.51
400 401 2.496070 TCCTTGTATCTCGTCTTGGGTG 59.504 50.000 0.00 0.00 0.00 4.61
401 402 2.233922 CCTTGTATCTCGTCTTGGGTGT 59.766 50.000 0.00 0.00 0.00 4.16
402 403 3.254060 CTTGTATCTCGTCTTGGGTGTG 58.746 50.000 0.00 0.00 0.00 3.82
403 404 2.244695 TGTATCTCGTCTTGGGTGTGT 58.755 47.619 0.00 0.00 0.00 3.72
404 405 2.029380 TGTATCTCGTCTTGGGTGTGTG 60.029 50.000 0.00 0.00 0.00 3.82
405 406 1.048601 ATCTCGTCTTGGGTGTGTGT 58.951 50.000 0.00 0.00 0.00 3.72
406 407 0.104120 TCTCGTCTTGGGTGTGTGTG 59.896 55.000 0.00 0.00 0.00 3.82
407 408 0.880278 CTCGTCTTGGGTGTGTGTGG 60.880 60.000 0.00 0.00 0.00 4.17
408 409 1.153249 CGTCTTGGGTGTGTGTGGT 60.153 57.895 0.00 0.00 0.00 4.16
409 410 1.436195 CGTCTTGGGTGTGTGTGGTG 61.436 60.000 0.00 0.00 0.00 4.17
410 411 0.393808 GTCTTGGGTGTGTGTGGTGT 60.394 55.000 0.00 0.00 0.00 4.16
411 412 0.393673 TCTTGGGTGTGTGTGGTGTG 60.394 55.000 0.00 0.00 0.00 3.82
412 413 2.003658 CTTGGGTGTGTGTGGTGTGC 62.004 60.000 0.00 0.00 0.00 4.57
413 414 3.582120 GGGTGTGTGTGGTGTGCG 61.582 66.667 0.00 0.00 0.00 5.34
414 415 2.822255 GGTGTGTGTGGTGTGCGT 60.822 61.111 0.00 0.00 0.00 5.24
415 416 2.403378 GGTGTGTGTGGTGTGCGTT 61.403 57.895 0.00 0.00 0.00 4.84
416 417 1.504446 GTGTGTGTGGTGTGCGTTT 59.496 52.632 0.00 0.00 0.00 3.60
417 418 0.796491 GTGTGTGTGGTGTGCGTTTG 60.796 55.000 0.00 0.00 0.00 2.93
418 419 1.237954 TGTGTGTGGTGTGCGTTTGT 61.238 50.000 0.00 0.00 0.00 2.83
419 420 0.727970 GTGTGTGGTGTGCGTTTGTA 59.272 50.000 0.00 0.00 0.00 2.41
420 421 1.332375 GTGTGTGGTGTGCGTTTGTAT 59.668 47.619 0.00 0.00 0.00 2.29
421 422 1.600013 TGTGTGGTGTGCGTTTGTATC 59.400 47.619 0.00 0.00 0.00 2.24
422 423 0.862490 TGTGGTGTGCGTTTGTATCG 59.138 50.000 0.00 0.00 0.00 2.92
423 424 1.141645 GTGGTGTGCGTTTGTATCGA 58.858 50.000 0.00 0.00 0.00 3.59
424 425 1.730064 GTGGTGTGCGTTTGTATCGAT 59.270 47.619 2.16 2.16 0.00 3.59
425 426 1.729517 TGGTGTGCGTTTGTATCGATG 59.270 47.619 8.54 0.00 0.00 3.84
426 427 1.062002 GGTGTGCGTTTGTATCGATGG 59.938 52.381 8.54 0.00 0.00 3.51
427 428 0.724549 TGTGCGTTTGTATCGATGGC 59.275 50.000 8.54 1.30 0.00 4.40
428 429 1.006832 GTGCGTTTGTATCGATGGCT 58.993 50.000 8.54 0.00 0.00 4.75
429 430 1.396996 GTGCGTTTGTATCGATGGCTT 59.603 47.619 8.54 0.00 0.00 4.35
430 431 1.396648 TGCGTTTGTATCGATGGCTTG 59.603 47.619 8.54 0.00 0.00 4.01
431 432 1.268032 GCGTTTGTATCGATGGCTTGG 60.268 52.381 8.54 0.00 0.00 3.61
432 433 2.006888 CGTTTGTATCGATGGCTTGGT 58.993 47.619 8.54 0.00 0.00 3.67
433 434 2.418628 CGTTTGTATCGATGGCTTGGTT 59.581 45.455 8.54 0.00 0.00 3.67
434 435 3.727673 CGTTTGTATCGATGGCTTGGTTG 60.728 47.826 8.54 0.00 0.00 3.77
435 436 2.779755 TGTATCGATGGCTTGGTTGT 57.220 45.000 8.54 0.00 0.00 3.32
436 437 2.355197 TGTATCGATGGCTTGGTTGTG 58.645 47.619 8.54 0.00 0.00 3.33
437 438 1.670811 GTATCGATGGCTTGGTTGTGG 59.329 52.381 8.54 0.00 0.00 4.17
438 439 0.327924 ATCGATGGCTTGGTTGTGGA 59.672 50.000 0.00 0.00 0.00 4.02
439 440 0.327924 TCGATGGCTTGGTTGTGGAT 59.672 50.000 0.00 0.00 0.00 3.41
440 441 0.452987 CGATGGCTTGGTTGTGGATG 59.547 55.000 0.00 0.00 0.00 3.51
441 442 1.549203 GATGGCTTGGTTGTGGATGT 58.451 50.000 0.00 0.00 0.00 3.06
442 443 1.895131 GATGGCTTGGTTGTGGATGTT 59.105 47.619 0.00 0.00 0.00 2.71
443 444 1.039068 TGGCTTGGTTGTGGATGTTG 58.961 50.000 0.00 0.00 0.00 3.33
444 445 0.318120 GGCTTGGTTGTGGATGTTGG 59.682 55.000 0.00 0.00 0.00 3.77
445 446 1.039856 GCTTGGTTGTGGATGTTGGT 58.960 50.000 0.00 0.00 0.00 3.67
446 447 1.412343 GCTTGGTTGTGGATGTTGGTT 59.588 47.619 0.00 0.00 0.00 3.67
447 448 2.802774 GCTTGGTTGTGGATGTTGGTTG 60.803 50.000 0.00 0.00 0.00 3.77
448 449 0.749649 TGGTTGTGGATGTTGGTTGC 59.250 50.000 0.00 0.00 0.00 4.17
449 450 1.039856 GGTTGTGGATGTTGGTTGCT 58.960 50.000 0.00 0.00 0.00 3.91
450 451 1.412343 GGTTGTGGATGTTGGTTGCTT 59.588 47.619 0.00 0.00 0.00 3.91
451 452 2.158971 GGTTGTGGATGTTGGTTGCTTT 60.159 45.455 0.00 0.00 0.00 3.51
452 453 3.068873 GGTTGTGGATGTTGGTTGCTTTA 59.931 43.478 0.00 0.00 0.00 1.85
453 454 4.262420 GGTTGTGGATGTTGGTTGCTTTAT 60.262 41.667 0.00 0.00 0.00 1.40
454 455 5.047660 GGTTGTGGATGTTGGTTGCTTTATA 60.048 40.000 0.00 0.00 0.00 0.98
455 456 6.451393 GTTGTGGATGTTGGTTGCTTTATAA 58.549 36.000 0.00 0.00 0.00 0.98
456 457 6.849085 TGTGGATGTTGGTTGCTTTATAAT 57.151 33.333 0.00 0.00 0.00 1.28
457 458 6.862209 TGTGGATGTTGGTTGCTTTATAATC 58.138 36.000 0.00 0.00 0.00 1.75
458 459 6.663093 TGTGGATGTTGGTTGCTTTATAATCT 59.337 34.615 0.00 0.00 0.00 2.40
459 460 7.831690 TGTGGATGTTGGTTGCTTTATAATCTA 59.168 33.333 0.00 0.00 0.00 1.98
460 461 8.682710 GTGGATGTTGGTTGCTTTATAATCTAA 58.317 33.333 0.00 0.00 0.00 2.10
461 462 9.249053 TGGATGTTGGTTGCTTTATAATCTAAA 57.751 29.630 0.00 0.00 0.00 1.85
462 463 9.736023 GGATGTTGGTTGCTTTATAATCTAAAG 57.264 33.333 1.30 1.30 37.53 1.85
469 470 4.648651 GCTTTATAATCTAAAGCGGGGGA 58.351 43.478 12.40 0.00 46.31 4.81
470 471 5.067954 GCTTTATAATCTAAAGCGGGGGAA 58.932 41.667 12.40 0.00 46.31 3.97
471 472 5.533528 GCTTTATAATCTAAAGCGGGGGAAA 59.466 40.000 12.40 0.00 46.31 3.13
472 473 6.294010 GCTTTATAATCTAAAGCGGGGGAAAG 60.294 42.308 12.40 0.00 46.31 2.62
473 474 1.763968 AATCTAAAGCGGGGGAAAGC 58.236 50.000 0.00 0.00 0.00 3.51
474 475 0.106669 ATCTAAAGCGGGGGAAAGCC 60.107 55.000 0.00 0.00 0.00 4.35
475 476 1.205460 TCTAAAGCGGGGGAAAGCCT 61.205 55.000 0.00 0.00 0.00 4.58
476 477 0.323451 CTAAAGCGGGGGAAAGCCTT 60.323 55.000 0.00 0.00 0.00 4.35
477 478 0.113580 TAAAGCGGGGGAAAGCCTTT 59.886 50.000 0.00 0.00 0.00 3.11
478 479 0.762842 AAAGCGGGGGAAAGCCTTTT 60.763 50.000 0.00 0.00 0.00 2.27
479 480 0.762842 AAGCGGGGGAAAGCCTTTTT 60.763 50.000 0.00 0.00 0.00 1.94
480 481 1.185618 AGCGGGGGAAAGCCTTTTTC 61.186 55.000 0.00 0.00 0.00 2.29
481 482 1.584495 CGGGGGAAAGCCTTTTTCG 59.416 57.895 0.00 0.00 0.00 3.46
482 483 1.873270 CGGGGGAAAGCCTTTTTCGG 61.873 60.000 0.00 0.00 0.00 4.30
483 484 0.541063 GGGGGAAAGCCTTTTTCGGA 60.541 55.000 0.00 0.00 0.00 4.55
484 485 1.557099 GGGGAAAGCCTTTTTCGGAT 58.443 50.000 0.00 0.00 0.00 4.18
485 486 1.899814 GGGGAAAGCCTTTTTCGGATT 59.100 47.619 0.00 0.00 33.30 3.01
486 487 3.093814 GGGGAAAGCCTTTTTCGGATTA 58.906 45.455 0.00 0.00 31.32 1.75
487 488 3.704566 GGGGAAAGCCTTTTTCGGATTAT 59.295 43.478 0.00 0.00 31.32 1.28
488 489 4.891168 GGGGAAAGCCTTTTTCGGATTATA 59.109 41.667 0.00 0.00 31.32 0.98
489 490 5.538813 GGGGAAAGCCTTTTTCGGATTATAT 59.461 40.000 0.00 0.00 31.32 0.86
490 491 6.294564 GGGGAAAGCCTTTTTCGGATTATATC 60.295 42.308 0.00 0.00 31.32 1.63
491 492 6.371389 GGAAAGCCTTTTTCGGATTATATCG 58.629 40.000 0.00 0.00 31.32 2.92
516 517 5.959652 AATTGTTGGCTAACACGTTTTTC 57.040 34.783 15.94 0.00 45.91 2.29
522 523 3.065648 TGGCTAACACGTTTTTCCTGTTC 59.934 43.478 0.00 0.00 30.76 3.18
587 601 3.065510 AGGTCGTACTCATCAGTTCATCG 59.934 47.826 0.00 0.00 33.62 3.84
653 667 1.202698 ACCAACAGAAGGTGAGCTCAC 60.203 52.381 34.25 34.25 45.72 3.51
673 2019 2.562912 GCGAAGTCGTCCCGTACA 59.437 61.111 2.25 0.00 42.22 2.90
701 2047 0.685097 CCAAACCCTCTTCTCGTCCA 59.315 55.000 0.00 0.00 0.00 4.02
736 2388 1.227674 GGCCATGACTAAGCTCGGG 60.228 63.158 0.00 0.00 0.00 5.14
784 2436 1.830145 GCCGCTAGGATTCCTGGAA 59.170 57.895 19.45 12.26 41.02 3.53
898 2550 2.759973 TCTGCCCTCGCCTCGATT 60.760 61.111 0.00 0.00 34.61 3.34
964 2620 5.497474 AGTTTGCGATTACAGGAGGTTAAT 58.503 37.500 0.00 0.00 0.00 1.40
968 2626 4.873827 TGCGATTACAGGAGGTTAATTCAC 59.126 41.667 0.00 0.00 0.00 3.18
978 2637 7.390718 ACAGGAGGTTAATTCACATAAGTTGAC 59.609 37.037 0.00 0.00 0.00 3.18
992 2651 6.708054 ACATAAGTTGACCTAATATGAGCTGC 59.292 38.462 0.00 0.00 0.00 5.25
997 2656 7.158021 AGTTGACCTAATATGAGCTGCTTATC 58.842 38.462 10.43 0.00 0.00 1.75
998 2657 6.924913 TGACCTAATATGAGCTGCTTATCT 57.075 37.500 10.43 0.00 0.00 1.98
1077 3251 4.789075 GTCTGCCTTCGCCGCGTA 62.789 66.667 13.39 1.60 0.00 4.42
1775 3958 1.006102 CGTTCGTGAGCCTCAAGGT 60.006 57.895 7.80 0.00 37.57 3.50
1782 3965 0.108585 TGAGCCTCAAGGTGGACAAC 59.891 55.000 0.00 0.00 37.57 3.32
1939 4129 1.079127 CGGAACATCGCCAAGGAGT 60.079 57.895 0.00 0.00 0.00 3.85
2008 4201 0.178992 GCATCCATCCCGGGATCAAA 60.179 55.000 33.87 20.90 45.91 2.69
2037 4230 1.760613 CATGCATGGCCTTCCTTCAAT 59.239 47.619 19.40 0.00 0.00 2.57
2038 4231 1.187974 TGCATGGCCTTCCTTCAATG 58.812 50.000 3.32 0.00 0.00 2.82
2039 4232 1.272592 TGCATGGCCTTCCTTCAATGA 60.273 47.619 3.32 0.00 0.00 2.57
2040 4233 1.826720 GCATGGCCTTCCTTCAATGAA 59.173 47.619 3.32 0.00 0.00 2.57
2041 4234 2.159142 GCATGGCCTTCCTTCAATGAAG 60.159 50.000 15.64 15.64 39.17 3.02
2042 4235 3.359033 CATGGCCTTCCTTCAATGAAGA 58.641 45.455 23.32 7.67 41.71 2.87
2043 4236 3.744940 TGGCCTTCCTTCAATGAAGAT 57.255 42.857 23.32 0.00 41.71 2.40
2044 4237 4.051661 TGGCCTTCCTTCAATGAAGATT 57.948 40.909 23.32 0.00 41.71 2.40
2045 4238 4.019174 TGGCCTTCCTTCAATGAAGATTC 58.981 43.478 23.32 8.01 41.71 2.52
2046 4239 4.264083 TGGCCTTCCTTCAATGAAGATTCT 60.264 41.667 23.32 0.00 41.71 2.40
2047 4240 5.044919 TGGCCTTCCTTCAATGAAGATTCTA 60.045 40.000 23.32 4.13 41.71 2.10
2048 4241 6.067350 GGCCTTCCTTCAATGAAGATTCTAT 58.933 40.000 23.32 0.00 41.71 1.98
2049 4242 6.548993 GGCCTTCCTTCAATGAAGATTCTATT 59.451 38.462 23.32 0.00 41.71 1.73
2050 4243 7.069208 GGCCTTCCTTCAATGAAGATTCTATTT 59.931 37.037 23.32 0.00 41.71 1.40
2051 4244 8.134261 GCCTTCCTTCAATGAAGATTCTATTTC 58.866 37.037 23.32 1.29 41.71 2.17
2052 4245 8.628280 CCTTCCTTCAATGAAGATTCTATTTCC 58.372 37.037 23.32 0.00 41.71 3.13
2053 4246 7.792374 TCCTTCAATGAAGATTCTATTTCCG 57.208 36.000 23.32 3.24 41.71 4.30
2054 4247 6.260936 TCCTTCAATGAAGATTCTATTTCCGC 59.739 38.462 23.32 0.00 41.71 5.54
2055 4248 6.261826 CCTTCAATGAAGATTCTATTTCCGCT 59.738 38.462 23.32 0.00 41.71 5.52
2056 4249 7.201767 CCTTCAATGAAGATTCTATTTCCGCTT 60.202 37.037 23.32 0.00 41.71 4.68
2057 4250 8.731275 TTCAATGAAGATTCTATTTCCGCTTA 57.269 30.769 0.00 0.00 0.00 3.09
2058 4251 8.370493 TCAATGAAGATTCTATTTCCGCTTAG 57.630 34.615 0.00 0.00 0.00 2.18
2059 4252 7.987458 TCAATGAAGATTCTATTTCCGCTTAGT 59.013 33.333 0.00 0.00 0.00 2.24
2060 4253 7.721286 ATGAAGATTCTATTTCCGCTTAGTG 57.279 36.000 0.00 0.00 0.00 2.74
2061 4254 5.523916 TGAAGATTCTATTTCCGCTTAGTGC 59.476 40.000 0.00 0.00 38.57 4.40
2072 4265 0.855349 GCTTAGTGCGTGATGATCGG 59.145 55.000 0.00 0.00 0.00 4.18
2073 4266 0.855349 CTTAGTGCGTGATGATCGGC 59.145 55.000 1.86 1.86 0.00 5.54
2074 4267 0.529773 TTAGTGCGTGATGATCGGCC 60.530 55.000 0.00 0.00 0.00 6.13
2075 4268 2.363711 TAGTGCGTGATGATCGGCCC 62.364 60.000 0.00 0.00 0.00 5.80
2076 4269 3.469970 TGCGTGATGATCGGCCCT 61.470 61.111 0.00 0.00 0.00 5.19
2077 4270 2.203070 GCGTGATGATCGGCCCTT 60.203 61.111 0.00 0.00 0.00 3.95
2078 4271 2.537560 GCGTGATGATCGGCCCTTG 61.538 63.158 0.00 0.00 0.00 3.61
2079 4272 1.153369 CGTGATGATCGGCCCTTGT 60.153 57.895 0.00 0.00 0.00 3.16
2080 4273 0.744414 CGTGATGATCGGCCCTTGTT 60.744 55.000 0.00 0.00 0.00 2.83
2081 4274 0.734889 GTGATGATCGGCCCTTGTTG 59.265 55.000 0.00 0.00 0.00 3.33
2082 4275 0.617935 TGATGATCGGCCCTTGTTGA 59.382 50.000 0.00 0.00 0.00 3.18
2083 4276 1.212688 TGATGATCGGCCCTTGTTGAT 59.787 47.619 0.00 0.00 0.00 2.57
2084 4277 2.301346 GATGATCGGCCCTTGTTGATT 58.699 47.619 0.00 0.00 0.00 2.57
2085 4278 3.118075 TGATGATCGGCCCTTGTTGATTA 60.118 43.478 0.00 0.00 0.00 1.75
2086 4279 2.639065 TGATCGGCCCTTGTTGATTAC 58.361 47.619 0.00 0.00 0.00 1.89
2087 4280 1.597663 GATCGGCCCTTGTTGATTACG 59.402 52.381 0.00 0.00 0.00 3.18
2088 4281 0.322322 TCGGCCCTTGTTGATTACGT 59.678 50.000 0.00 0.00 0.00 3.57
2089 4282 1.161843 CGGCCCTTGTTGATTACGTT 58.838 50.000 0.00 0.00 0.00 3.99
2090 4283 1.538075 CGGCCCTTGTTGATTACGTTT 59.462 47.619 0.00 0.00 0.00 3.60
2091 4284 2.743126 CGGCCCTTGTTGATTACGTTTA 59.257 45.455 0.00 0.00 0.00 2.01
2092 4285 3.188873 CGGCCCTTGTTGATTACGTTTAA 59.811 43.478 0.00 0.00 0.00 1.52
2093 4286 4.320348 CGGCCCTTGTTGATTACGTTTAAA 60.320 41.667 0.00 0.00 0.00 1.52
2094 4287 5.620429 CGGCCCTTGTTGATTACGTTTAAAT 60.620 40.000 0.00 0.00 0.00 1.40
2095 4288 6.403418 CGGCCCTTGTTGATTACGTTTAAATA 60.403 38.462 0.00 0.00 0.00 1.40
2096 4289 7.314393 GGCCCTTGTTGATTACGTTTAAATAA 58.686 34.615 0.00 0.00 0.00 1.40
2097 4290 7.486870 GGCCCTTGTTGATTACGTTTAAATAAG 59.513 37.037 0.00 0.00 0.00 1.73
2098 4291 8.238631 GCCCTTGTTGATTACGTTTAAATAAGA 58.761 33.333 0.00 0.00 0.00 2.10
2099 4292 9.550811 CCCTTGTTGATTACGTTTAAATAAGAC 57.449 33.333 0.00 0.00 0.00 3.01
2110 4303 7.487180 CGTTTAAATAAGACAAACGGGATTG 57.513 36.000 10.14 0.00 46.51 2.67
2111 4304 6.033091 CGTTTAAATAAGACAAACGGGATTGC 59.967 38.462 10.14 0.00 46.51 3.56
2112 4305 6.827586 TTAAATAAGACAAACGGGATTGCT 57.172 33.333 0.00 0.00 33.52 3.91
2113 4306 7.925043 TTAAATAAGACAAACGGGATTGCTA 57.075 32.000 0.00 0.00 33.52 3.49
2114 4307 6.827586 AAATAAGACAAACGGGATTGCTAA 57.172 33.333 0.00 0.00 33.52 3.09
2115 4308 6.827586 AATAAGACAAACGGGATTGCTAAA 57.172 33.333 0.00 0.00 33.52 1.85
2116 4309 7.404671 AATAAGACAAACGGGATTGCTAAAT 57.595 32.000 0.00 0.00 33.52 1.40
2117 4310 4.965119 AGACAAACGGGATTGCTAAATC 57.035 40.909 0.00 0.00 41.37 2.17
2118 4311 4.589908 AGACAAACGGGATTGCTAAATCT 58.410 39.130 0.00 0.00 41.74 2.40
2119 4312 5.741011 AGACAAACGGGATTGCTAAATCTA 58.259 37.500 0.00 0.00 41.74 1.98
2120 4313 6.177610 AGACAAACGGGATTGCTAAATCTAA 58.822 36.000 0.00 0.00 41.74 2.10
2121 4314 6.316390 AGACAAACGGGATTGCTAAATCTAAG 59.684 38.462 0.00 0.00 41.74 2.18
2122 4315 6.177610 ACAAACGGGATTGCTAAATCTAAGA 58.822 36.000 0.00 0.00 41.74 2.10
2123 4316 6.316390 ACAAACGGGATTGCTAAATCTAAGAG 59.684 38.462 0.00 0.00 41.74 2.85
2124 4317 4.381411 ACGGGATTGCTAAATCTAAGAGC 58.619 43.478 0.00 0.00 41.74 4.09
2125 4318 4.141711 ACGGGATTGCTAAATCTAAGAGCA 60.142 41.667 0.00 0.00 44.25 4.26
2126 4319 4.999950 CGGGATTGCTAAATCTAAGAGCAT 59.000 41.667 0.00 0.00 45.20 3.79
2127 4320 5.121454 CGGGATTGCTAAATCTAAGAGCATC 59.879 44.000 0.00 0.00 45.20 3.91
2128 4321 6.237154 GGGATTGCTAAATCTAAGAGCATCT 58.763 40.000 0.00 0.00 45.20 2.90
2129 4322 6.714356 GGGATTGCTAAATCTAAGAGCATCTT 59.286 38.462 0.00 0.00 46.91 2.40
2130 4323 7.094848 GGGATTGCTAAATCTAAGAGCATCTTC 60.095 40.741 0.00 0.00 46.00 2.87
2131 4324 7.443575 GGATTGCTAAATCTAAGAGCATCTTCA 59.556 37.037 0.00 0.00 46.00 3.02
2132 4325 8.281893 GATTGCTAAATCTAAGAGCATCTTCAC 58.718 37.037 0.00 0.00 44.53 3.18
2161 4354 3.420417 GCGCGTTAAAAATCAGTTTGCAG 60.420 43.478 8.43 0.00 0.00 4.41
2162 4355 3.420417 CGCGTTAAAAATCAGTTTGCAGC 60.420 43.478 0.00 0.00 0.00 5.25
2169 4362 4.093952 CAGTTTGCAGCGCCGGAG 62.094 66.667 5.05 1.55 0.00 4.63
2172 4365 4.617520 TTTGCAGCGCCGGAGTCA 62.618 61.111 5.05 0.00 0.00 3.41
2173 4366 3.899981 TTTGCAGCGCCGGAGTCAT 62.900 57.895 5.05 0.00 0.00 3.06
2337 4568 8.766000 TTCTTCTACGATACAAAATAGTGCAA 57.234 30.769 0.00 0.00 0.00 4.08
2510 4837 1.199097 GATGTTCAATTTGGCGACCGT 59.801 47.619 0.00 0.00 0.00 4.83
2530 4857 1.781025 CTTCCGCGTTTGCTTGTCCA 61.781 55.000 4.92 0.00 39.65 4.02
2585 4914 4.507916 CTCCGCCCTCCTCTCCGA 62.508 72.222 0.00 0.00 0.00 4.55
2589 4918 2.052690 CGCCCTCCTCTCCGAGAAA 61.053 63.158 0.00 0.00 30.97 2.52
2681 5010 4.749310 CAGGCTGAGACGGCGCTT 62.749 66.667 9.42 0.00 36.46 4.68
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 4.624364 CATAGATGCCCGCCCGCA 62.624 66.667 0.00 0.00 44.35 5.69
14 15 4.320456 AGCGGCCATAGATGCCCG 62.320 66.667 7.53 7.53 46.48 6.13
15 16 2.359230 GAGCGGCCATAGATGCCC 60.359 66.667 2.24 0.00 46.48 5.36
16 17 2.740055 CGAGCGGCCATAGATGCC 60.740 66.667 2.24 0.00 45.70 4.40
17 18 2.740055 CCGAGCGGCCATAGATGC 60.740 66.667 2.24 0.00 0.00 3.91
18 19 2.047844 CCCGAGCGGCCATAGATG 60.048 66.667 2.24 0.00 0.00 2.90
19 20 2.524394 ACCCGAGCGGCCATAGAT 60.524 61.111 2.24 0.00 33.26 1.98
20 21 3.536917 CACCCGAGCGGCCATAGA 61.537 66.667 2.24 0.00 33.26 1.98
21 22 4.609018 CCACCCGAGCGGCCATAG 62.609 72.222 2.24 0.00 33.26 2.23
28 29 4.227134 AGCTATGCCACCCGAGCG 62.227 66.667 0.00 0.00 39.96 5.03
29 30 2.590007 CAGCTATGCCACCCGAGC 60.590 66.667 0.00 0.00 35.07 5.03
39 40 2.898840 CAGCCACCCGCAGCTATG 60.899 66.667 0.00 0.00 41.38 2.23
40 41 3.391665 GACAGCCACCCGCAGCTAT 62.392 63.158 0.00 0.00 41.38 2.97
41 42 4.082523 GACAGCCACCCGCAGCTA 62.083 66.667 0.00 0.00 41.38 3.32
64 65 3.839432 CTCTTCCGTCGCCTCCCC 61.839 72.222 0.00 0.00 0.00 4.81
65 66 2.647158 AACTCTTCCGTCGCCTCCC 61.647 63.158 0.00 0.00 0.00 4.30
66 67 1.446272 CAACTCTTCCGTCGCCTCC 60.446 63.158 0.00 0.00 0.00 4.30
67 68 0.038526 TTCAACTCTTCCGTCGCCTC 60.039 55.000 0.00 0.00 0.00 4.70
68 69 0.038159 CTTCAACTCTTCCGTCGCCT 60.038 55.000 0.00 0.00 0.00 5.52
69 70 1.627550 GCTTCAACTCTTCCGTCGCC 61.628 60.000 0.00 0.00 0.00 5.54
70 71 0.944311 TGCTTCAACTCTTCCGTCGC 60.944 55.000 0.00 0.00 0.00 5.19
71 72 0.784778 GTGCTTCAACTCTTCCGTCG 59.215 55.000 0.00 0.00 0.00 5.12
72 73 1.149148 GGTGCTTCAACTCTTCCGTC 58.851 55.000 0.00 0.00 0.00 4.79
73 74 0.600255 CGGTGCTTCAACTCTTCCGT 60.600 55.000 0.00 0.00 33.20 4.69
74 75 1.291877 CCGGTGCTTCAACTCTTCCG 61.292 60.000 0.00 0.00 36.85 4.30
75 76 0.034896 TCCGGTGCTTCAACTCTTCC 59.965 55.000 0.00 0.00 0.00 3.46
76 77 1.270358 ACTCCGGTGCTTCAACTCTTC 60.270 52.381 0.00 0.00 0.00 2.87
77 78 0.759346 ACTCCGGTGCTTCAACTCTT 59.241 50.000 0.00 0.00 0.00 2.85
78 79 1.272769 GTACTCCGGTGCTTCAACTCT 59.727 52.381 0.00 0.00 0.00 3.24
79 80 1.000506 TGTACTCCGGTGCTTCAACTC 59.999 52.381 0.00 0.00 0.00 3.01
80 81 1.045407 TGTACTCCGGTGCTTCAACT 58.955 50.000 0.00 0.00 0.00 3.16
81 82 2.000447 GATGTACTCCGGTGCTTCAAC 59.000 52.381 0.00 0.00 34.27 3.18
82 83 1.621317 TGATGTACTCCGGTGCTTCAA 59.379 47.619 0.00 0.00 38.50 2.69
83 84 1.067142 GTGATGTACTCCGGTGCTTCA 60.067 52.381 0.00 0.00 38.88 3.02
84 85 1.204941 AGTGATGTACTCCGGTGCTTC 59.795 52.381 0.00 0.00 33.17 3.86
85 86 1.267121 AGTGATGTACTCCGGTGCTT 58.733 50.000 0.00 0.00 33.17 3.91
86 87 1.066858 CAAGTGATGTACTCCGGTGCT 60.067 52.381 0.00 0.00 39.18 4.40
87 88 1.359848 CAAGTGATGTACTCCGGTGC 58.640 55.000 0.00 0.00 39.18 5.01
88 89 1.359848 GCAAGTGATGTACTCCGGTG 58.640 55.000 0.00 0.00 39.18 4.94
89 90 0.249398 GGCAAGTGATGTACTCCGGT 59.751 55.000 0.00 0.00 39.18 5.28
90 91 0.462047 GGGCAAGTGATGTACTCCGG 60.462 60.000 0.00 0.00 39.18 5.14
91 92 0.249120 TGGGCAAGTGATGTACTCCG 59.751 55.000 0.00 0.00 39.18 4.63
92 93 1.279271 ACTGGGCAAGTGATGTACTCC 59.721 52.381 0.00 0.00 39.18 3.85
93 94 2.770164 ACTGGGCAAGTGATGTACTC 57.230 50.000 0.00 0.00 39.18 2.59
94 95 2.094182 CGTACTGGGCAAGTGATGTACT 60.094 50.000 4.33 0.00 40.26 2.73
95 96 2.268298 CGTACTGGGCAAGTGATGTAC 58.732 52.381 4.33 0.00 40.26 2.90
96 97 1.404986 GCGTACTGGGCAAGTGATGTA 60.405 52.381 4.33 0.00 40.26 2.29
97 98 0.673644 GCGTACTGGGCAAGTGATGT 60.674 55.000 4.33 0.00 40.26 3.06
98 99 1.695893 CGCGTACTGGGCAAGTGATG 61.696 60.000 4.33 0.00 40.26 3.07
99 100 1.447838 CGCGTACTGGGCAAGTGAT 60.448 57.895 4.33 0.00 40.26 3.06
100 101 2.048597 CGCGTACTGGGCAAGTGA 60.049 61.111 4.33 0.00 40.26 3.41
116 117 3.490793 ATCATCGTCGGCCAGAGCG 62.491 63.158 2.24 8.14 41.24 5.03
117 118 1.953138 CATCATCGTCGGCCAGAGC 60.953 63.158 2.24 0.00 38.76 4.09
118 119 0.596083 GTCATCATCGTCGGCCAGAG 60.596 60.000 2.24 0.00 0.00 3.35
119 120 1.437573 GTCATCATCGTCGGCCAGA 59.562 57.895 2.24 0.00 0.00 3.86
120 121 1.946156 CGTCATCATCGTCGGCCAG 60.946 63.158 2.24 0.00 0.00 4.85
121 122 2.104132 CGTCATCATCGTCGGCCA 59.896 61.111 2.24 0.00 0.00 5.36
122 123 1.944676 GACGTCATCATCGTCGGCC 60.945 63.158 11.55 0.00 45.64 6.13
123 124 3.601981 GACGTCATCATCGTCGGC 58.398 61.111 11.55 0.00 45.64 5.54
127 128 2.277949 CGCGGACGTCATCATCGT 60.278 61.111 18.91 0.00 44.27 3.73
128 129 3.024609 CCGCGGACGTCATCATCG 61.025 66.667 24.07 12.20 37.70 3.84
129 130 1.944676 GTCCGCGGACGTCATCATC 60.945 63.158 39.77 16.54 37.70 2.92
130 131 2.104331 GTCCGCGGACGTCATCAT 59.896 61.111 39.77 0.00 37.70 2.45
138 139 4.988486 AACACGACGTCCGCGGAC 62.988 66.667 41.75 41.75 43.32 4.79
139 140 4.688419 GAACACGACGTCCGCGGA 62.688 66.667 27.28 27.28 43.32 5.54
141 142 4.695231 AGGAACACGACGTCCGCG 62.695 66.667 10.58 0.00 43.32 6.46
142 143 2.804090 GAGGAACACGACGTCCGC 60.804 66.667 10.58 0.00 43.32 5.54
143 144 2.126580 GGAGGAACACGACGTCCG 60.127 66.667 10.58 7.90 45.44 4.79
144 145 2.260743 GGGAGGAACACGACGTCC 59.739 66.667 10.58 0.00 40.30 4.79
145 146 1.080705 CAGGGAGGAACACGACGTC 60.081 63.158 5.18 5.18 0.00 4.34
146 147 3.048602 CAGGGAGGAACACGACGT 58.951 61.111 0.00 0.00 0.00 4.34
147 148 2.432628 GCAGGGAGGAACACGACG 60.433 66.667 0.00 0.00 0.00 5.12
148 149 1.374758 CTGCAGGGAGGAACACGAC 60.375 63.158 5.57 0.00 0.00 4.34
149 150 2.583441 CCTGCAGGGAGGAACACGA 61.583 63.158 26.14 0.00 34.69 4.35
150 151 2.046892 CCTGCAGGGAGGAACACG 60.047 66.667 26.14 0.00 34.69 4.49
151 152 2.360475 GCCTGCAGGGAGGAACAC 60.360 66.667 33.46 10.92 34.69 3.32
152 153 2.129555 GAAGCCTGCAGGGAGGAACA 62.130 60.000 33.46 0.00 34.69 3.18
153 154 1.377856 GAAGCCTGCAGGGAGGAAC 60.378 63.158 33.46 15.92 34.69 3.62
154 155 2.959484 CGAAGCCTGCAGGGAGGAA 61.959 63.158 33.46 0.00 34.69 3.36
155 156 3.393970 CGAAGCCTGCAGGGAGGA 61.394 66.667 33.46 0.00 34.69 3.71
156 157 3.672295 GACGAAGCCTGCAGGGAGG 62.672 68.421 33.46 10.38 37.23 4.30
157 158 2.125350 GACGAAGCCTGCAGGGAG 60.125 66.667 33.46 9.60 37.23 4.30
158 159 4.069232 CGACGAAGCCTGCAGGGA 62.069 66.667 33.46 0.00 37.23 4.20
159 160 4.379243 ACGACGAAGCCTGCAGGG 62.379 66.667 33.46 19.22 35.18 4.45
160 161 3.114616 CACGACGAAGCCTGCAGG 61.115 66.667 29.34 29.34 38.53 4.85
161 162 3.114616 CCACGACGAAGCCTGCAG 61.115 66.667 6.78 6.78 0.00 4.41
162 163 3.923864 ACCACGACGAAGCCTGCA 61.924 61.111 0.00 0.00 0.00 4.41
163 164 3.414700 CACCACGACGAAGCCTGC 61.415 66.667 0.00 0.00 0.00 4.85
164 165 3.414700 GCACCACGACGAAGCCTG 61.415 66.667 0.00 0.00 0.00 4.85
165 166 3.575351 GAGCACCACGACGAAGCCT 62.575 63.158 0.00 0.00 0.00 4.58
166 167 3.112709 GAGCACCACGACGAAGCC 61.113 66.667 0.00 0.00 0.00 4.35
167 168 3.112709 GGAGCACCACGACGAAGC 61.113 66.667 0.00 0.00 35.97 3.86
168 169 1.006102 AAGGAGCACCACGACGAAG 60.006 57.895 0.00 0.00 38.94 3.79
169 170 1.006571 GAAGGAGCACCACGACGAA 60.007 57.895 0.00 0.00 38.94 3.85
170 171 1.863662 GAGAAGGAGCACCACGACGA 61.864 60.000 0.00 0.00 38.94 4.20
171 172 1.444553 GAGAAGGAGCACCACGACG 60.445 63.158 2.07 0.00 38.94 5.12
172 173 1.079750 GGAGAAGGAGCACCACGAC 60.080 63.158 2.07 0.00 38.94 4.34
173 174 0.832135 AAGGAGAAGGAGCACCACGA 60.832 55.000 2.07 0.00 38.94 4.35
174 175 0.390472 GAAGGAGAAGGAGCACCACG 60.390 60.000 2.07 0.00 38.94 4.94
175 176 0.035915 GGAAGGAGAAGGAGCACCAC 60.036 60.000 2.07 0.00 38.94 4.16
176 177 0.178891 AGGAAGGAGAAGGAGCACCA 60.179 55.000 2.07 0.00 38.94 4.17
177 178 0.988063 AAGGAAGGAGAAGGAGCACC 59.012 55.000 0.00 0.00 0.00 5.01
178 179 1.905894 AGAAGGAAGGAGAAGGAGCAC 59.094 52.381 0.00 0.00 0.00 4.40
179 180 2.334006 AGAAGGAAGGAGAAGGAGCA 57.666 50.000 0.00 0.00 0.00 4.26
180 181 2.102420 GCTAGAAGGAAGGAGAAGGAGC 59.898 54.545 0.00 0.00 0.00 4.70
181 182 3.636764 GAGCTAGAAGGAAGGAGAAGGAG 59.363 52.174 0.00 0.00 0.00 3.69
182 183 3.628769 GGAGCTAGAAGGAAGGAGAAGGA 60.629 52.174 0.00 0.00 0.00 3.36
183 184 2.698274 GGAGCTAGAAGGAAGGAGAAGG 59.302 54.545 0.00 0.00 0.00 3.46
184 185 2.360801 CGGAGCTAGAAGGAAGGAGAAG 59.639 54.545 0.00 0.00 0.00 2.85
185 186 2.379972 CGGAGCTAGAAGGAAGGAGAA 58.620 52.381 0.00 0.00 0.00 2.87
186 187 1.410365 CCGGAGCTAGAAGGAAGGAGA 60.410 57.143 0.00 0.00 0.00 3.71
187 188 1.036707 CCGGAGCTAGAAGGAAGGAG 58.963 60.000 0.00 0.00 0.00 3.69
188 189 0.397254 CCCGGAGCTAGAAGGAAGGA 60.397 60.000 0.73 0.00 0.00 3.36
189 190 0.688087 ACCCGGAGCTAGAAGGAAGG 60.688 60.000 0.73 0.00 0.00 3.46
190 191 0.461961 CACCCGGAGCTAGAAGGAAG 59.538 60.000 0.73 0.00 0.00 3.46
191 192 0.040646 TCACCCGGAGCTAGAAGGAA 59.959 55.000 0.73 0.00 0.00 3.36
192 193 0.040646 TTCACCCGGAGCTAGAAGGA 59.959 55.000 0.73 0.00 0.00 3.36
193 194 0.902531 TTTCACCCGGAGCTAGAAGG 59.097 55.000 0.73 0.00 0.00 3.46
194 195 1.740718 GCTTTCACCCGGAGCTAGAAG 60.741 57.143 0.73 0.24 33.72 2.85
195 196 0.249398 GCTTTCACCCGGAGCTAGAA 59.751 55.000 0.73 0.00 33.72 2.10
196 197 0.614979 AGCTTTCACCCGGAGCTAGA 60.615 55.000 12.61 0.00 44.41 2.43
197 198 0.250513 AAGCTTTCACCCGGAGCTAG 59.749 55.000 14.40 1.14 45.42 3.42
198 199 0.036388 CAAGCTTTCACCCGGAGCTA 60.036 55.000 14.40 0.00 45.42 3.32
200 201 0.678048 ATCAAGCTTTCACCCGGAGC 60.678 55.000 0.73 2.72 36.68 4.70
201 202 1.065854 AGATCAAGCTTTCACCCGGAG 60.066 52.381 0.73 0.00 0.00 4.63
202 203 0.984230 AGATCAAGCTTTCACCCGGA 59.016 50.000 0.73 0.00 0.00 5.14
203 204 1.740025 GAAGATCAAGCTTTCACCCGG 59.260 52.381 0.00 0.00 0.00 5.73
204 205 1.394917 CGAAGATCAAGCTTTCACCCG 59.605 52.381 0.00 0.00 0.00 5.28
205 206 1.740025 CCGAAGATCAAGCTTTCACCC 59.260 52.381 0.00 0.00 0.00 4.61
206 207 2.699954 TCCGAAGATCAAGCTTTCACC 58.300 47.619 0.00 0.00 0.00 4.02
217 218 0.317938 CACCGTCCGATCCGAAGATC 60.318 60.000 0.00 0.00 44.76 2.75
218 219 1.734137 CACCGTCCGATCCGAAGAT 59.266 57.895 0.00 0.00 34.57 2.40
219 220 2.412323 CCACCGTCCGATCCGAAGA 61.412 63.158 0.00 0.00 0.00 2.87
220 221 2.104331 CCACCGTCCGATCCGAAG 59.896 66.667 0.00 0.00 0.00 3.79
221 222 4.137872 GCCACCGTCCGATCCGAA 62.138 66.667 0.00 0.00 0.00 4.30
224 225 4.867599 GTCGCCACCGTCCGATCC 62.868 72.222 0.00 0.00 35.76 3.36
225 226 2.901051 AATGTCGCCACCGTCCGATC 62.901 60.000 0.00 0.00 35.76 3.69
226 227 2.901051 GAATGTCGCCACCGTCCGAT 62.901 60.000 0.00 0.00 35.76 4.18
227 228 3.636313 GAATGTCGCCACCGTCCGA 62.636 63.158 0.00 0.00 35.54 4.55
228 229 3.186047 GAATGTCGCCACCGTCCG 61.186 66.667 0.00 0.00 35.54 4.79
229 230 2.818274 GGAATGTCGCCACCGTCC 60.818 66.667 0.00 0.00 35.54 4.79
230 231 3.186047 CGGAATGTCGCCACCGTC 61.186 66.667 0.00 0.00 40.42 4.79
233 234 3.124921 CCACGGAATGTCGCCACC 61.125 66.667 0.00 0.00 0.00 4.61
234 235 2.358247 ACCACGGAATGTCGCCAC 60.358 61.111 0.00 0.00 0.00 5.01
235 236 2.047655 GACCACGGAATGTCGCCA 60.048 61.111 0.00 0.00 0.00 5.69
236 237 3.186047 CGACCACGGAATGTCGCC 61.186 66.667 0.00 0.00 46.41 5.54
239 240 0.459063 GGGTACGACCACGGAATGTC 60.459 60.000 6.41 0.00 41.02 3.06
240 241 1.593265 GGGTACGACCACGGAATGT 59.407 57.895 6.41 0.00 41.02 2.71
241 242 1.153509 GGGGTACGACCACGGAATG 60.154 63.158 6.41 0.00 41.02 2.67
242 243 3.302129 GGGGTACGACCACGGAAT 58.698 61.111 6.41 0.00 41.02 3.01
247 248 0.036671 CCAAGAAGGGGTACGACCAC 60.037 60.000 7.82 2.76 43.77 4.16
248 249 0.178926 TCCAAGAAGGGGTACGACCA 60.179 55.000 7.82 0.00 41.02 4.02
249 250 0.535797 CTCCAAGAAGGGGTACGACC 59.464 60.000 0.00 0.00 38.24 4.79
250 251 0.535797 CCTCCAAGAAGGGGTACGAC 59.464 60.000 0.00 0.00 35.37 4.34
251 252 1.262640 GCCTCCAAGAAGGGGTACGA 61.263 60.000 0.00 0.00 35.37 3.43
252 253 1.221021 GCCTCCAAGAAGGGGTACG 59.779 63.158 0.00 0.00 35.37 3.67
253 254 0.919710 ATGCCTCCAAGAAGGGGTAC 59.080 55.000 0.00 0.00 35.37 3.34
254 255 1.284785 CAATGCCTCCAAGAAGGGGTA 59.715 52.381 0.00 0.00 35.37 3.69
255 256 0.040204 CAATGCCTCCAAGAAGGGGT 59.960 55.000 0.00 0.00 35.37 4.95
256 257 0.040204 ACAATGCCTCCAAGAAGGGG 59.960 55.000 0.00 0.00 36.88 4.79
257 258 1.005215 AGACAATGCCTCCAAGAAGGG 59.995 52.381 0.00 0.00 36.88 3.95
258 259 2.490903 CAAGACAATGCCTCCAAGAAGG 59.509 50.000 0.00 0.00 39.62 3.46
259 260 2.490903 CCAAGACAATGCCTCCAAGAAG 59.509 50.000 0.00 0.00 0.00 2.85
260 261 2.108075 TCCAAGACAATGCCTCCAAGAA 59.892 45.455 0.00 0.00 0.00 2.52
261 262 1.704628 TCCAAGACAATGCCTCCAAGA 59.295 47.619 0.00 0.00 0.00 3.02
262 263 2.089980 CTCCAAGACAATGCCTCCAAG 58.910 52.381 0.00 0.00 0.00 3.61
263 264 1.887956 GCTCCAAGACAATGCCTCCAA 60.888 52.381 0.00 0.00 0.00 3.53
264 265 0.322816 GCTCCAAGACAATGCCTCCA 60.323 55.000 0.00 0.00 0.00 3.86
265 266 1.034292 GGCTCCAAGACAATGCCTCC 61.034 60.000 0.00 0.00 40.36 4.30
266 267 1.034292 GGGCTCCAAGACAATGCCTC 61.034 60.000 0.00 0.00 42.84 4.70
267 268 1.000396 GGGCTCCAAGACAATGCCT 60.000 57.895 0.00 0.00 42.84 4.75
268 269 1.000396 AGGGCTCCAAGACAATGCC 60.000 57.895 0.00 0.00 42.56 4.40
269 270 1.372087 CGAGGGCTCCAAGACAATGC 61.372 60.000 0.00 0.00 0.00 3.56
270 271 0.745845 CCGAGGGCTCCAAGACAATG 60.746 60.000 0.00 0.00 0.00 2.82
271 272 1.201429 ACCGAGGGCTCCAAGACAAT 61.201 55.000 0.00 0.00 0.00 2.71
272 273 1.827399 GACCGAGGGCTCCAAGACAA 61.827 60.000 0.00 0.00 0.00 3.18
273 274 2.203788 ACCGAGGGCTCCAAGACA 60.204 61.111 0.00 0.00 0.00 3.41
274 275 2.579738 GACCGAGGGCTCCAAGAC 59.420 66.667 0.00 0.00 0.00 3.01
275 276 2.683933 GGACCGAGGGCTCCAAGA 60.684 66.667 0.00 0.00 0.00 3.02
276 277 4.148825 CGGACCGAGGGCTCCAAG 62.149 72.222 8.64 0.00 0.00 3.61
296 297 1.499049 GAAGAAGTGTGACGGACCAC 58.501 55.000 0.00 0.00 37.55 4.16
297 298 0.391597 GGAAGAAGTGTGACGGACCA 59.608 55.000 0.00 0.00 0.00 4.02
298 299 0.320508 GGGAAGAAGTGTGACGGACC 60.321 60.000 0.00 0.00 0.00 4.46
299 300 0.666577 CGGGAAGAAGTGTGACGGAC 60.667 60.000 0.00 0.00 0.00 4.79
300 301 1.663739 CGGGAAGAAGTGTGACGGA 59.336 57.895 0.00 0.00 0.00 4.69
301 302 1.374252 CCGGGAAGAAGTGTGACGG 60.374 63.158 0.00 0.00 0.00 4.79
302 303 0.249741 AACCGGGAAGAAGTGTGACG 60.250 55.000 6.32 0.00 0.00 4.35
303 304 1.202604 TGAACCGGGAAGAAGTGTGAC 60.203 52.381 6.32 0.00 0.00 3.67
304 305 1.124780 TGAACCGGGAAGAAGTGTGA 58.875 50.000 6.32 0.00 0.00 3.58
305 306 2.076863 GATGAACCGGGAAGAAGTGTG 58.923 52.381 6.32 0.00 0.00 3.82
306 307 1.337823 CGATGAACCGGGAAGAAGTGT 60.338 52.381 6.32 0.00 0.00 3.55
307 308 1.359848 CGATGAACCGGGAAGAAGTG 58.640 55.000 6.32 0.00 0.00 3.16
308 309 0.249398 CCGATGAACCGGGAAGAAGT 59.751 55.000 6.32 0.00 45.43 3.01
309 310 3.065575 CCGATGAACCGGGAAGAAG 57.934 57.895 6.32 0.00 45.43 2.85
317 318 1.889105 CAGGATGCCCGATGAACCG 60.889 63.158 0.00 0.00 37.58 4.44
318 319 1.097547 CACAGGATGCCCGATGAACC 61.098 60.000 0.00 0.00 42.53 3.62
319 320 1.097547 CCACAGGATGCCCGATGAAC 61.098 60.000 0.00 0.00 42.53 3.18
320 321 1.224315 CCACAGGATGCCCGATGAA 59.776 57.895 0.00 0.00 42.53 2.57
321 322 2.745308 CCCACAGGATGCCCGATGA 61.745 63.158 0.00 0.00 42.53 2.92
322 323 2.203252 CCCACAGGATGCCCGATG 60.203 66.667 0.00 0.00 42.53 3.84
323 324 3.492353 CCCCACAGGATGCCCGAT 61.492 66.667 0.00 0.00 42.53 4.18
329 330 4.802051 CCACGCCCCCACAGGATG 62.802 72.222 0.00 0.00 46.00 3.51
330 331 3.935456 TACCACGCCCCCACAGGAT 62.935 63.158 0.00 0.00 38.24 3.24
331 332 4.642488 TACCACGCCCCCACAGGA 62.642 66.667 0.00 0.00 38.24 3.86
332 333 4.096003 CTACCACGCCCCCACAGG 62.096 72.222 0.00 0.00 0.00 4.00
333 334 3.310860 GACTACCACGCCCCCACAG 62.311 68.421 0.00 0.00 0.00 3.66
334 335 3.315949 GACTACCACGCCCCCACA 61.316 66.667 0.00 0.00 0.00 4.17
335 336 4.446413 CGACTACCACGCCCCCAC 62.446 72.222 0.00 0.00 0.00 4.61
337 338 3.698820 AACGACTACCACGCCCCC 61.699 66.667 0.00 0.00 0.00 5.40
338 339 2.433664 CAACGACTACCACGCCCC 60.434 66.667 0.00 0.00 0.00 5.80
339 340 1.445582 CTCAACGACTACCACGCCC 60.446 63.158 0.00 0.00 0.00 6.13
340 341 1.445582 CCTCAACGACTACCACGCC 60.446 63.158 0.00 0.00 0.00 5.68
341 342 1.445582 CCCTCAACGACTACCACGC 60.446 63.158 0.00 0.00 0.00 5.34
342 343 0.388134 CACCCTCAACGACTACCACG 60.388 60.000 0.00 0.00 0.00 4.94
343 344 0.677842 ACACCCTCAACGACTACCAC 59.322 55.000 0.00 0.00 0.00 4.16
344 345 0.677288 CACACCCTCAACGACTACCA 59.323 55.000 0.00 0.00 0.00 3.25
345 346 0.677842 ACACACCCTCAACGACTACC 59.322 55.000 0.00 0.00 0.00 3.18
346 347 1.068127 ACACACACCCTCAACGACTAC 59.932 52.381 0.00 0.00 0.00 2.73
347 348 1.338973 GACACACACCCTCAACGACTA 59.661 52.381 0.00 0.00 0.00 2.59
348 349 0.104304 GACACACACCCTCAACGACT 59.896 55.000 0.00 0.00 0.00 4.18
349 350 1.213094 CGACACACACCCTCAACGAC 61.213 60.000 0.00 0.00 0.00 4.34
350 351 1.066752 CGACACACACCCTCAACGA 59.933 57.895 0.00 0.00 0.00 3.85
351 352 1.954146 CCGACACACACCCTCAACG 60.954 63.158 0.00 0.00 0.00 4.10
352 353 1.145377 ACCGACACACACCCTCAAC 59.855 57.895 0.00 0.00 0.00 3.18
353 354 1.145156 CACCGACACACACCCTCAA 59.855 57.895 0.00 0.00 0.00 3.02
354 355 2.818841 CACCGACACACACCCTCA 59.181 61.111 0.00 0.00 0.00 3.86
355 356 2.665185 GCACCGACACACACCCTC 60.665 66.667 0.00 0.00 0.00 4.30
356 357 4.250305 GGCACCGACACACACCCT 62.250 66.667 0.00 0.00 0.00 4.34
369 370 1.152963 ATACAAGGATGCCGGGCAC 60.153 57.895 26.48 17.58 43.04 5.01
370 371 1.148273 GATACAAGGATGCCGGGCA 59.852 57.895 26.11 26.11 44.86 5.36
371 372 0.603975 GAGATACAAGGATGCCGGGC 60.604 60.000 13.32 13.32 0.00 6.13
372 373 0.319900 CGAGATACAAGGATGCCGGG 60.320 60.000 2.18 0.00 0.00 5.73
373 374 0.389391 ACGAGATACAAGGATGCCGG 59.611 55.000 0.00 0.00 0.00 6.13
374 375 1.338337 AGACGAGATACAAGGATGCCG 59.662 52.381 0.00 0.00 0.00 5.69
375 376 3.126831 CAAGACGAGATACAAGGATGCC 58.873 50.000 0.00 0.00 0.00 4.40
376 377 3.126831 CCAAGACGAGATACAAGGATGC 58.873 50.000 0.00 0.00 0.00 3.91
377 378 3.133003 ACCCAAGACGAGATACAAGGATG 59.867 47.826 0.00 0.00 0.00 3.51
378 379 3.133003 CACCCAAGACGAGATACAAGGAT 59.867 47.826 0.00 0.00 0.00 3.24
379 380 2.496070 CACCCAAGACGAGATACAAGGA 59.504 50.000 0.00 0.00 0.00 3.36
380 381 2.233922 ACACCCAAGACGAGATACAAGG 59.766 50.000 0.00 0.00 0.00 3.61
381 382 3.254060 CACACCCAAGACGAGATACAAG 58.746 50.000 0.00 0.00 0.00 3.16
382 383 2.631062 ACACACCCAAGACGAGATACAA 59.369 45.455 0.00 0.00 0.00 2.41
383 384 2.029380 CACACACCCAAGACGAGATACA 60.029 50.000 0.00 0.00 0.00 2.29
384 385 2.029290 ACACACACCCAAGACGAGATAC 60.029 50.000 0.00 0.00 0.00 2.24
385 386 2.029380 CACACACACCCAAGACGAGATA 60.029 50.000 0.00 0.00 0.00 1.98
386 387 1.048601 ACACACACCCAAGACGAGAT 58.951 50.000 0.00 0.00 0.00 2.75
387 388 0.104120 CACACACACCCAAGACGAGA 59.896 55.000 0.00 0.00 0.00 4.04
388 389 0.880278 CCACACACACCCAAGACGAG 60.880 60.000 0.00 0.00 0.00 4.18
389 390 1.145156 CCACACACACCCAAGACGA 59.855 57.895 0.00 0.00 0.00 4.20
390 391 1.153249 ACCACACACACCCAAGACG 60.153 57.895 0.00 0.00 0.00 4.18
391 392 0.393808 ACACCACACACACCCAAGAC 60.394 55.000 0.00 0.00 0.00 3.01
392 393 0.393673 CACACCACACACACCCAAGA 60.394 55.000 0.00 0.00 0.00 3.02
393 394 2.003658 GCACACCACACACACCCAAG 62.004 60.000 0.00 0.00 0.00 3.61
394 395 2.049185 GCACACCACACACACCCAA 61.049 57.895 0.00 0.00 0.00 4.12
395 396 2.439338 GCACACCACACACACCCA 60.439 61.111 0.00 0.00 0.00 4.51
396 397 3.582120 CGCACACCACACACACCC 61.582 66.667 0.00 0.00 0.00 4.61
397 398 1.928706 AAACGCACACCACACACACC 61.929 55.000 0.00 0.00 0.00 4.16
398 399 0.796491 CAAACGCACACCACACACAC 60.796 55.000 0.00 0.00 0.00 3.82
399 400 1.237954 ACAAACGCACACCACACACA 61.238 50.000 0.00 0.00 0.00 3.72
400 401 0.727970 TACAAACGCACACCACACAC 59.272 50.000 0.00 0.00 0.00 3.82
401 402 1.600013 GATACAAACGCACACCACACA 59.400 47.619 0.00 0.00 0.00 3.72
402 403 1.397945 CGATACAAACGCACACCACAC 60.398 52.381 0.00 0.00 0.00 3.82
403 404 0.862490 CGATACAAACGCACACCACA 59.138 50.000 0.00 0.00 0.00 4.17
404 405 1.141645 TCGATACAAACGCACACCAC 58.858 50.000 0.00 0.00 0.00 4.16
405 406 1.729517 CATCGATACAAACGCACACCA 59.270 47.619 0.00 0.00 0.00 4.17
406 407 1.062002 CCATCGATACAAACGCACACC 59.938 52.381 0.00 0.00 0.00 4.16
407 408 1.529010 GCCATCGATACAAACGCACAC 60.529 52.381 0.00 0.00 0.00 3.82
408 409 0.724549 GCCATCGATACAAACGCACA 59.275 50.000 0.00 0.00 0.00 4.57
409 410 1.006832 AGCCATCGATACAAACGCAC 58.993 50.000 0.00 0.00 0.00 5.34
410 411 1.396648 CAAGCCATCGATACAAACGCA 59.603 47.619 0.00 0.00 0.00 5.24
411 412 1.268032 CCAAGCCATCGATACAAACGC 60.268 52.381 0.00 0.00 0.00 4.84
412 413 2.006888 ACCAAGCCATCGATACAAACG 58.993 47.619 0.00 0.00 0.00 3.60
413 414 3.190535 ACAACCAAGCCATCGATACAAAC 59.809 43.478 0.00 0.00 0.00 2.93
414 415 3.190327 CACAACCAAGCCATCGATACAAA 59.810 43.478 0.00 0.00 0.00 2.83
415 416 2.746904 CACAACCAAGCCATCGATACAA 59.253 45.455 0.00 0.00 0.00 2.41
416 417 2.355197 CACAACCAAGCCATCGATACA 58.645 47.619 0.00 0.00 0.00 2.29
417 418 1.670811 CCACAACCAAGCCATCGATAC 59.329 52.381 0.00 0.00 0.00 2.24
418 419 1.557371 TCCACAACCAAGCCATCGATA 59.443 47.619 0.00 0.00 0.00 2.92
419 420 0.327924 TCCACAACCAAGCCATCGAT 59.672 50.000 0.00 0.00 0.00 3.59
420 421 0.327924 ATCCACAACCAAGCCATCGA 59.672 50.000 0.00 0.00 0.00 3.59
421 422 0.452987 CATCCACAACCAAGCCATCG 59.547 55.000 0.00 0.00 0.00 3.84
422 423 1.549203 ACATCCACAACCAAGCCATC 58.451 50.000 0.00 0.00 0.00 3.51
423 424 1.619827 CAACATCCACAACCAAGCCAT 59.380 47.619 0.00 0.00 0.00 4.40
424 425 1.039068 CAACATCCACAACCAAGCCA 58.961 50.000 0.00 0.00 0.00 4.75
425 426 0.318120 CCAACATCCACAACCAAGCC 59.682 55.000 0.00 0.00 0.00 4.35
426 427 1.039856 ACCAACATCCACAACCAAGC 58.960 50.000 0.00 0.00 0.00 4.01
427 428 2.802774 GCAACCAACATCCACAACCAAG 60.803 50.000 0.00 0.00 0.00 3.61
428 429 1.137872 GCAACCAACATCCACAACCAA 59.862 47.619 0.00 0.00 0.00 3.67
429 430 0.749649 GCAACCAACATCCACAACCA 59.250 50.000 0.00 0.00 0.00 3.67
430 431 1.039856 AGCAACCAACATCCACAACC 58.960 50.000 0.00 0.00 0.00 3.77
431 432 2.888834 AAGCAACCAACATCCACAAC 57.111 45.000 0.00 0.00 0.00 3.32
432 433 6.656632 TTATAAAGCAACCAACATCCACAA 57.343 33.333 0.00 0.00 0.00 3.33
433 434 6.663093 AGATTATAAAGCAACCAACATCCACA 59.337 34.615 0.00 0.00 0.00 4.17
434 435 7.100458 AGATTATAAAGCAACCAACATCCAC 57.900 36.000 0.00 0.00 0.00 4.02
435 436 8.815565 TTAGATTATAAAGCAACCAACATCCA 57.184 30.769 0.00 0.00 0.00 3.41
436 437 9.736023 CTTTAGATTATAAAGCAACCAACATCC 57.264 33.333 0.00 0.00 0.00 3.51
448 449 6.294010 GCTTTCCCCCGCTTTAGATTATAAAG 60.294 42.308 6.46 6.46 37.53 1.85
449 450 5.533528 GCTTTCCCCCGCTTTAGATTATAAA 59.466 40.000 0.00 0.00 0.00 1.40
450 451 5.067954 GCTTTCCCCCGCTTTAGATTATAA 58.932 41.667 0.00 0.00 0.00 0.98
451 452 4.506095 GGCTTTCCCCCGCTTTAGATTATA 60.506 45.833 0.00 0.00 0.00 0.98
452 453 3.487372 GCTTTCCCCCGCTTTAGATTAT 58.513 45.455 0.00 0.00 0.00 1.28
453 454 2.422377 GGCTTTCCCCCGCTTTAGATTA 60.422 50.000 0.00 0.00 0.00 1.75
454 455 1.685180 GGCTTTCCCCCGCTTTAGATT 60.685 52.381 0.00 0.00 0.00 2.40
455 456 0.106669 GGCTTTCCCCCGCTTTAGAT 60.107 55.000 0.00 0.00 0.00 1.98
456 457 1.205460 AGGCTTTCCCCCGCTTTAGA 61.205 55.000 0.00 0.00 0.00 2.10
457 458 0.323451 AAGGCTTTCCCCCGCTTTAG 60.323 55.000 0.00 0.00 0.00 1.85
458 459 0.113580 AAAGGCTTTCCCCCGCTTTA 59.886 50.000 6.68 0.00 0.00 1.85
459 460 0.762842 AAAAGGCTTTCCCCCGCTTT 60.763 50.000 13.76 0.00 0.00 3.51
460 461 0.762842 AAAAAGGCTTTCCCCCGCTT 60.763 50.000 13.76 0.00 0.00 4.68
461 462 1.152333 AAAAAGGCTTTCCCCCGCT 60.152 52.632 13.76 0.00 0.00 5.52
462 463 1.292223 GAAAAAGGCTTTCCCCCGC 59.708 57.895 13.76 0.00 0.00 6.13
463 464 1.584495 CGAAAAAGGCTTTCCCCCG 59.416 57.895 13.76 10.31 0.00 5.73
464 465 0.541063 TCCGAAAAAGGCTTTCCCCC 60.541 55.000 13.76 2.28 0.00 5.40
465 466 1.557099 ATCCGAAAAAGGCTTTCCCC 58.443 50.000 13.76 4.71 0.00 4.81
466 467 6.567891 CGATATAATCCGAAAAAGGCTTTCCC 60.568 42.308 13.76 7.18 0.00 3.97
467 468 6.204108 TCGATATAATCCGAAAAAGGCTTTCC 59.796 38.462 13.76 7.54 0.00 3.13
468 469 7.186021 TCGATATAATCCGAAAAAGGCTTTC 57.814 36.000 13.76 0.41 0.00 2.62
469 470 7.562454 TTCGATATAATCCGAAAAAGGCTTT 57.438 32.000 6.68 6.68 41.13 3.51
478 479 7.012894 AGCCAACAATTTTCGATATAATCCGAA 59.987 33.333 0.00 0.00 42.17 4.30
479 480 6.485313 AGCCAACAATTTTCGATATAATCCGA 59.515 34.615 0.00 0.00 0.00 4.55
480 481 6.668323 AGCCAACAATTTTCGATATAATCCG 58.332 36.000 0.00 0.00 0.00 4.18
481 482 9.394477 GTTAGCCAACAATTTTCGATATAATCC 57.606 33.333 0.00 0.00 34.60 3.01
482 483 9.944663 TGTTAGCCAACAATTTTCGATATAATC 57.055 29.630 0.00 0.00 41.69 1.75
483 484 9.730420 GTGTTAGCCAACAATTTTCGATATAAT 57.270 29.630 0.00 0.00 45.99 1.28
484 485 7.906010 CGTGTTAGCCAACAATTTTCGATATAA 59.094 33.333 0.00 0.00 45.99 0.98
485 486 7.064847 ACGTGTTAGCCAACAATTTTCGATATA 59.935 33.333 10.85 0.00 45.99 0.86
486 487 6.128117 ACGTGTTAGCCAACAATTTTCGATAT 60.128 34.615 10.85 0.00 45.99 1.63
487 488 5.179742 ACGTGTTAGCCAACAATTTTCGATA 59.820 36.000 10.85 0.00 45.99 2.92
488 489 4.023536 ACGTGTTAGCCAACAATTTTCGAT 60.024 37.500 10.85 0.00 45.99 3.59
489 490 3.312973 ACGTGTTAGCCAACAATTTTCGA 59.687 39.130 10.85 0.00 45.99 3.71
490 491 3.623863 ACGTGTTAGCCAACAATTTTCG 58.376 40.909 0.00 1.41 45.99 3.46
491 492 5.959652 AAACGTGTTAGCCAACAATTTTC 57.040 34.783 0.00 0.00 45.99 2.29
522 523 2.254546 TATGCTAATTCACGGGCTGG 57.745 50.000 0.00 0.00 0.00 4.85
548 549 3.445450 CGACCTCTATATACTGCAGGCAT 59.555 47.826 19.93 13.14 0.00 4.40
564 565 4.602995 GATGAACTGATGAGTACGACCTC 58.397 47.826 0.00 0.00 0.00 3.85
673 2019 2.702270 AGAGGGTTTGGCTTTCCATT 57.298 45.000 0.00 0.00 43.05 3.16
686 2032 1.686741 GGATCTGGACGAGAAGAGGGT 60.687 57.143 0.00 0.00 33.12 4.34
689 2035 0.665835 CCGGATCTGGACGAGAAGAG 59.334 60.000 16.28 0.00 33.12 2.85
690 2036 1.384989 GCCGGATCTGGACGAGAAGA 61.385 60.000 25.54 0.00 33.12 2.87
808 2460 2.036098 TAGACGACGGAGGGGCAA 59.964 61.111 0.00 0.00 0.00 4.52
928 2584 2.546368 TCGCAAACTTGAGCACGTTAAT 59.454 40.909 0.00 0.00 0.00 1.40
934 2590 3.482786 CTGTAATCGCAAACTTGAGCAC 58.517 45.455 0.00 0.00 0.00 4.40
935 2591 2.483877 CCTGTAATCGCAAACTTGAGCA 59.516 45.455 0.00 0.00 0.00 4.26
964 2620 8.486210 AGCTCATATTAGGTCAACTTATGTGAA 58.514 33.333 0.00 0.00 36.40 3.18
968 2626 6.933521 AGCAGCTCATATTAGGTCAACTTATG 59.066 38.462 0.00 0.00 0.00 1.90
978 2637 9.664332 AACATAAGATAAGCAGCTCATATTAGG 57.336 33.333 3.50 3.50 0.00 2.69
992 2651 5.005394 CCGTTGACGTGGAACATAAGATAAG 59.995 44.000 0.00 0.00 44.52 1.73
997 2656 1.127951 GCCGTTGACGTGGAACATAAG 59.872 52.381 0.00 0.00 44.52 1.73
998 2657 1.149987 GCCGTTGACGTGGAACATAA 58.850 50.000 0.00 0.00 44.52 1.90
1077 3251 2.827190 TAGACATCGGCGGCGTCT 60.827 61.111 31.06 26.44 42.49 4.18
1149 3323 0.738412 GTGCATTGGCCAGCATGTTC 60.738 55.000 21.28 6.29 43.44 3.18
1469 3646 1.101635 TCGGATCACTACCTCGCCTG 61.102 60.000 0.00 0.00 0.00 4.85
1479 3656 2.060980 GCACCCTCCTCGGATCACT 61.061 63.158 0.00 0.00 33.16 3.41
1550 3727 0.732880 CGTGTAGAACCAGCCGTCTG 60.733 60.000 0.00 0.00 40.02 3.51
1775 3958 3.697747 CGCCCCTACCGTTGTCCA 61.698 66.667 0.00 0.00 0.00 4.02
1782 3965 4.208686 GTCAGCTCGCCCCTACCG 62.209 72.222 0.00 0.00 0.00 4.02
2008 4201 2.438975 CCATGCATGCCGGACTGT 60.439 61.111 21.69 0.00 0.00 3.55
2029 4222 6.260936 GCGGAAATAGAATCTTCATTGAAGGA 59.739 38.462 22.86 12.18 39.82 3.36
2032 4225 7.630242 AAGCGGAAATAGAATCTTCATTGAA 57.370 32.000 0.00 0.00 0.00 2.69
2037 4230 5.523916 GCACTAAGCGGAAATAGAATCTTCA 59.476 40.000 0.00 0.00 0.00 3.02
2038 4231 5.980025 GCACTAAGCGGAAATAGAATCTTC 58.020 41.667 0.00 0.00 0.00 2.87
2039 4232 5.993106 GCACTAAGCGGAAATAGAATCTT 57.007 39.130 0.00 0.00 0.00 2.40
2053 4246 0.855349 CCGATCATCACGCACTAAGC 59.145 55.000 0.00 0.00 40.87 3.09
2054 4247 0.855349 GCCGATCATCACGCACTAAG 59.145 55.000 0.00 0.00 0.00 2.18
2055 4248 0.529773 GGCCGATCATCACGCACTAA 60.530 55.000 0.00 0.00 0.00 2.24
2056 4249 1.067416 GGCCGATCATCACGCACTA 59.933 57.895 0.00 0.00 0.00 2.74
2057 4250 2.202932 GGCCGATCATCACGCACT 60.203 61.111 0.00 0.00 0.00 4.40
2058 4251 3.272334 GGGCCGATCATCACGCAC 61.272 66.667 0.00 0.00 0.00 5.34
2059 4252 3.030168 AAGGGCCGATCATCACGCA 62.030 57.895 0.00 0.00 0.00 5.24
2060 4253 2.203070 AAGGGCCGATCATCACGC 60.203 61.111 0.00 0.00 0.00 5.34
2061 4254 0.744414 AACAAGGGCCGATCATCACG 60.744 55.000 0.00 0.00 0.00 4.35
2062 4255 0.734889 CAACAAGGGCCGATCATCAC 59.265 55.000 0.00 0.00 0.00 3.06
2063 4256 0.617935 TCAACAAGGGCCGATCATCA 59.382 50.000 0.00 0.00 0.00 3.07
2064 4257 1.972872 ATCAACAAGGGCCGATCATC 58.027 50.000 0.00 0.00 0.00 2.92
2065 4258 2.442236 AATCAACAAGGGCCGATCAT 57.558 45.000 0.00 0.00 0.00 2.45
2066 4259 2.639065 GTAATCAACAAGGGCCGATCA 58.361 47.619 0.00 0.00 0.00 2.92
2067 4260 1.597663 CGTAATCAACAAGGGCCGATC 59.402 52.381 0.00 0.00 0.00 3.69
2068 4261 1.065709 ACGTAATCAACAAGGGCCGAT 60.066 47.619 0.00 0.00 0.00 4.18
2069 4262 0.322322 ACGTAATCAACAAGGGCCGA 59.678 50.000 0.00 0.00 0.00 5.54
2070 4263 1.161843 AACGTAATCAACAAGGGCCG 58.838 50.000 0.00 0.00 0.00 6.13
2071 4264 4.769859 TTAAACGTAATCAACAAGGGCC 57.230 40.909 0.00 0.00 0.00 5.80
2072 4265 8.238631 TCTTATTTAAACGTAATCAACAAGGGC 58.761 33.333 0.00 0.00 0.00 5.19
2073 4266 9.550811 GTCTTATTTAAACGTAATCAACAAGGG 57.449 33.333 0.00 0.00 0.00 3.95
2087 4280 7.088272 AGCAATCCCGTTTGTCTTATTTAAAC 58.912 34.615 0.00 0.00 0.00 2.01
2088 4281 7.222000 AGCAATCCCGTTTGTCTTATTTAAA 57.778 32.000 0.00 0.00 0.00 1.52
2089 4282 6.827586 AGCAATCCCGTTTGTCTTATTTAA 57.172 33.333 0.00 0.00 0.00 1.52
2090 4283 7.925043 TTAGCAATCCCGTTTGTCTTATTTA 57.075 32.000 0.00 0.00 0.00 1.40
2091 4284 6.827586 TTAGCAATCCCGTTTGTCTTATTT 57.172 33.333 0.00 0.00 0.00 1.40
2092 4285 6.827586 TTTAGCAATCCCGTTTGTCTTATT 57.172 33.333 0.00 0.00 0.00 1.40
2093 4286 6.828785 AGATTTAGCAATCCCGTTTGTCTTAT 59.171 34.615 0.00 0.00 39.95 1.73
2094 4287 6.177610 AGATTTAGCAATCCCGTTTGTCTTA 58.822 36.000 0.00 0.00 39.95 2.10
2095 4288 5.010282 AGATTTAGCAATCCCGTTTGTCTT 58.990 37.500 0.00 0.00 39.95 3.01
2096 4289 4.589908 AGATTTAGCAATCCCGTTTGTCT 58.410 39.130 0.00 0.00 39.95 3.41
2097 4290 4.965119 AGATTTAGCAATCCCGTTTGTC 57.035 40.909 0.00 0.00 39.95 3.18
2098 4291 6.177610 TCTTAGATTTAGCAATCCCGTTTGT 58.822 36.000 0.00 0.00 39.95 2.83
2099 4292 6.677781 TCTTAGATTTAGCAATCCCGTTTG 57.322 37.500 0.00 0.00 39.95 2.93
2100 4293 5.297029 GCTCTTAGATTTAGCAATCCCGTTT 59.703 40.000 0.00 0.00 39.95 3.60
2101 4294 4.816925 GCTCTTAGATTTAGCAATCCCGTT 59.183 41.667 0.00 0.00 39.95 4.44
2102 4295 4.141711 TGCTCTTAGATTTAGCAATCCCGT 60.142 41.667 0.00 0.00 42.96 5.28
2103 4296 4.380531 TGCTCTTAGATTTAGCAATCCCG 58.619 43.478 0.00 0.00 42.96 5.14
2110 4303 6.018343 GTGGTGAAGATGCTCTTAGATTTAGC 60.018 42.308 0.00 0.00 36.73 3.09
2111 4304 6.199908 CGTGGTGAAGATGCTCTTAGATTTAG 59.800 42.308 0.00 0.00 36.73 1.85
2112 4305 6.042777 CGTGGTGAAGATGCTCTTAGATTTA 58.957 40.000 0.00 0.00 36.73 1.40
2113 4306 4.872691 CGTGGTGAAGATGCTCTTAGATTT 59.127 41.667 0.00 0.00 36.73 2.17
2114 4307 4.437239 CGTGGTGAAGATGCTCTTAGATT 58.563 43.478 0.00 0.00 36.73 2.40
2115 4308 3.739519 GCGTGGTGAAGATGCTCTTAGAT 60.740 47.826 0.00 0.00 36.73 1.98
2116 4309 2.417379 GCGTGGTGAAGATGCTCTTAGA 60.417 50.000 0.00 0.00 36.73 2.10
2117 4310 1.929836 GCGTGGTGAAGATGCTCTTAG 59.070 52.381 0.00 0.00 36.73 2.18
2118 4311 1.735700 CGCGTGGTGAAGATGCTCTTA 60.736 52.381 0.00 0.00 36.73 2.10
2119 4312 1.016130 CGCGTGGTGAAGATGCTCTT 61.016 55.000 0.00 0.00 39.87 2.85
2120 4313 1.446792 CGCGTGGTGAAGATGCTCT 60.447 57.895 0.00 0.00 0.00 4.09
2121 4314 2.456119 CCGCGTGGTGAAGATGCTC 61.456 63.158 6.91 0.00 0.00 4.26
2122 4315 2.434884 CCGCGTGGTGAAGATGCT 60.435 61.111 6.91 0.00 0.00 3.79
2123 4316 4.166011 GCCGCGTGGTGAAGATGC 62.166 66.667 17.91 0.00 37.67 3.91
2136 4329 0.453782 ACTGATTTTTAACGCGCCGC 60.454 50.000 5.73 0.00 0.00 6.53
2144 4337 3.056304 GGCGCTGCAAACTGATTTTTAA 58.944 40.909 7.64 0.00 0.00 1.52
2151 4344 4.617520 TCCGGCGCTGCAAACTGA 62.618 61.111 11.81 0.00 0.00 3.41
2161 4354 4.521062 AGCTGATGACTCCGGCGC 62.521 66.667 0.00 0.00 0.00 6.53
2162 4355 1.021390 AAAAGCTGATGACTCCGGCG 61.021 55.000 0.00 0.00 0.00 6.46
2169 4362 0.886563 AGCCAGCAAAAGCTGATGAC 59.113 50.000 18.23 5.56 44.60 3.06
2172 4365 1.544691 CTGAAGCCAGCAAAAGCTGAT 59.455 47.619 18.23 4.42 39.87 2.90
2173 4366 0.956633 CTGAAGCCAGCAAAAGCTGA 59.043 50.000 18.23 0.00 39.87 4.26
2445 4772 0.034896 ACTCCAATGACGAGCGGTTT 59.965 50.000 0.00 0.00 0.00 3.27
2510 4837 1.503818 GGACAAGCAAACGCGGAAGA 61.504 55.000 12.47 0.00 0.00 2.87
2585 4914 4.335315 TCATCAACGAGCAACAGTTTTTCT 59.665 37.500 0.00 0.00 0.00 2.52
2589 4918 3.609103 GTCATCAACGAGCAACAGTTT 57.391 42.857 0.00 0.00 0.00 2.66
2681 5010 2.771639 CGTGAGAATCGGAGGCGGA 61.772 63.158 0.00 0.00 38.61 5.54


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.