Multiple sequence alignment - TraesCS5B01G307800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G307800 chr5B 100.000 5674 0 0 1 5674 491031511 491037184 0.000000e+00 10479.0
1 TraesCS5B01G307800 chr5B 97.656 128 3 0 1298 1425 246562472 246562599 2.660000e-53 220.0
2 TraesCS5B01G307800 chr5B 81.553 103 15 3 1897 1996 288392036 288391935 1.310000e-11 82.4
3 TraesCS5B01G307800 chr5A 92.147 2534 137 26 1422 3925 520093063 520095564 0.000000e+00 3520.0
4 TraesCS5B01G307800 chr5A 89.504 1229 85 19 3933 5130 520095652 520096867 0.000000e+00 1515.0
5 TraesCS5B01G307800 chr5A 90.216 695 32 14 581 1256 520092359 520093036 0.000000e+00 874.0
6 TraesCS5B01G307800 chr5A 87.389 452 40 11 5109 5560 520112859 520113293 2.360000e-138 503.0
7 TraesCS5B01G307800 chr5A 94.853 136 5 2 1297 1432 688512347 688512214 1.600000e-50 211.0
8 TraesCS5B01G307800 chr5A 93.525 139 8 1 1286 1424 581101944 581102081 7.450000e-49 206.0
9 TraesCS5B01G307800 chr5A 93.443 61 4 0 257 317 520090275 520090335 2.180000e-14 91.6
10 TraesCS5B01G307800 chr5A 94.444 54 1 2 4804 4856 138089500 138089552 1.310000e-11 82.4
11 TraesCS5B01G307800 chr5D 91.271 2612 168 37 2137 4710 408999873 409002462 0.000000e+00 3506.0
12 TraesCS5B01G307800 chr5D 84.687 862 82 27 4852 5674 409002575 409003425 0.000000e+00 815.0
13 TraesCS5B01G307800 chr5D 88.109 698 47 20 588 1256 408998743 408999433 0.000000e+00 797.0
14 TraesCS5B01G307800 chr5D 90.845 284 24 2 1422 1705 408999460 408999741 4.150000e-101 379.0
15 TraesCS5B01G307800 chr2D 85.294 238 26 6 1895 2127 489669265 489669498 2.640000e-58 237.0
16 TraesCS5B01G307800 chr7A 99.219 128 1 0 1298 1425 33148549 33148676 1.230000e-56 231.0
17 TraesCS5B01G307800 chr6B 98.438 128 2 0 1298 1425 646953224 646953097 5.720000e-55 226.0
18 TraesCS5B01G307800 chr6B 94.545 55 2 1 4801 4855 648697392 648697445 3.640000e-12 84.2
19 TraesCS5B01G307800 chr1A 97.638 127 3 0 1298 1424 372223242 372223116 9.570000e-53 219.0
20 TraesCS5B01G307800 chr2A 94.815 135 7 0 1291 1425 166858102 166857968 1.600000e-50 211.0
21 TraesCS5B01G307800 chr2A 94.245 139 6 2 1294 1431 244060614 244060751 1.600000e-50 211.0
22 TraesCS5B01G307800 chr4A 94.245 139 5 3 1288 1424 627359974 627359837 5.760000e-50 209.0
23 TraesCS5B01G307800 chr3B 89.933 149 14 1 1430 1577 82839339 82839191 2.090000e-44 191.0
24 TraesCS5B01G307800 chr3B 89.831 59 2 2 4801 4856 578810956 578810899 7.890000e-09 73.1
25 TraesCS5B01G307800 chr3A 90.141 142 12 2 1430 1570 64307996 64307856 3.490000e-42 183.0
26 TraesCS5B01G307800 chr3A 91.667 48 4 0 4801 4848 581848939 581848892 3.670000e-07 67.6
27 TraesCS5B01G307800 chr3D 86.713 143 17 2 1429 1570 51785594 51785453 2.120000e-34 158.0
28 TraesCS5B01G307800 chr3D 88.889 63 3 2 4801 4859 441261007 441260945 2.190000e-09 75.0
29 TraesCS5B01G307800 chr2B 86.047 86 12 0 1894 1979 756305613 756305698 6.050000e-15 93.5
30 TraesCS5B01G307800 chr2B 86.047 86 12 0 1894 1979 756320461 756320546 6.050000e-15 93.5
31 TraesCS5B01G307800 chr2B 86.047 86 12 0 1894 1979 756334810 756334895 6.050000e-15 93.5
32 TraesCS5B01G307800 chr2B 80.000 100 18 1 1897 1994 541626720 541626819 7.890000e-09 73.1
33 TraesCS5B01G307800 chr2B 88.679 53 4 1 4806 4856 18111204 18111256 4.750000e-06 63.9
34 TraesCS5B01G307800 chr6D 88.333 60 4 3 4801 4857 33901518 33901459 1.020000e-07 69.4
35 TraesCS5B01G307800 chr1D 87.931 58 5 2 4801 4856 446443577 446443520 3.670000e-07 67.6


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G307800 chr5B 491031511 491037184 5673 False 10479.00 10479 100.0000 1 5674 1 chr5B.!!$F2 5673
1 TraesCS5B01G307800 chr5A 520090275 520096867 6592 False 1500.15 3520 91.3275 257 5130 4 chr5A.!!$F4 4873
2 TraesCS5B01G307800 chr5D 408998743 409003425 4682 False 1374.25 3506 88.7280 588 5674 4 chr5D.!!$F1 5086

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
677 2476 0.248539 GCATGTACGTCCGTCTCTCC 60.249 60.0 0.00 0.00 0.00 3.71 F
1309 3148 0.113776 TCACAGGTACTCCCTCCGTT 59.886 55.0 0.00 0.00 43.86 4.44 F
1313 3152 0.115745 AGGTACTCCCTCCGTTCCAA 59.884 55.0 0.00 0.00 40.71 3.53 F
1728 3567 0.536460 TTGAGGGGGACGAAAACAGC 60.536 55.0 0.00 0.00 0.00 4.40 F
2365 4206 0.538287 GTGCAGGCCCTCTGAGTTTT 60.538 55.0 0.00 0.00 46.18 2.43 F
3612 5481 0.685458 AGTGCATGGGAATTCAGCCC 60.685 55.0 7.93 0.27 46.22 5.19 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1494 3333 0.390860 CAGATCATGACGGGGTCCTC 59.609 60.000 0.00 0.0 0.00 3.71 R
2542 4383 0.524862 GAGTACGAGAAGCCGGTTCA 59.475 55.000 12.65 0.0 37.67 3.18 R
3209 5068 0.893270 TGCCACCAGAACCATTTCCG 60.893 55.000 0.00 0.0 31.28 4.30 R
3699 5568 2.360553 ACTTGACTCATGCTGACTCG 57.639 50.000 0.00 0.0 0.00 4.18 R
4084 6031 1.004745 CCACCATACCAAGCAGGAAGT 59.995 52.381 1.83 0.0 41.22 3.01 R
4706 6673 0.459489 GCTCCAAGGCACAAACACAA 59.541 50.000 0.00 0.0 0.00 3.33 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
35 36 7.403312 TTTTATATGGGCCATCGGATTAATG 57.597 36.000 25.07 0.00 0.00 1.90
36 37 2.220653 ATGGGCCATCGGATTAATGG 57.779 50.000 14.78 0.00 45.45 3.16
37 38 0.850100 TGGGCCATCGGATTAATGGT 59.150 50.000 0.00 0.00 44.65 3.55
38 39 1.216678 TGGGCCATCGGATTAATGGTT 59.783 47.619 0.00 0.00 44.65 3.67
39 40 2.443632 TGGGCCATCGGATTAATGGTTA 59.556 45.455 0.00 0.00 44.65 2.85
40 41 3.117474 TGGGCCATCGGATTAATGGTTAA 60.117 43.478 0.00 0.00 44.65 2.01
41 42 3.892588 GGGCCATCGGATTAATGGTTAAA 59.107 43.478 4.39 0.00 44.65 1.52
42 43 4.526650 GGGCCATCGGATTAATGGTTAAAT 59.473 41.667 4.39 0.00 44.65 1.40
43 44 5.712917 GGGCCATCGGATTAATGGTTAAATA 59.287 40.000 4.39 0.00 44.65 1.40
44 45 6.379988 GGGCCATCGGATTAATGGTTAAATAT 59.620 38.462 4.39 0.00 44.65 1.28
45 46 7.093509 GGGCCATCGGATTAATGGTTAAATATT 60.094 37.037 4.39 0.00 44.65 1.28
46 47 7.973944 GGCCATCGGATTAATGGTTAAATATTC 59.026 37.037 0.00 0.00 44.65 1.75
47 48 7.973944 GCCATCGGATTAATGGTTAAATATTCC 59.026 37.037 0.00 0.00 44.65 3.01
48 49 9.243105 CCATCGGATTAATGGTTAAATATTCCT 57.757 33.333 0.00 0.00 39.11 3.36
100 101 7.843490 TCTATTTTGATTGGTACTGTACTGC 57.157 36.000 16.79 2.96 0.00 4.40
101 102 7.620880 TCTATTTTGATTGGTACTGTACTGCT 58.379 34.615 16.79 2.73 0.00 4.24
102 103 8.755028 TCTATTTTGATTGGTACTGTACTGCTA 58.245 33.333 16.79 0.16 0.00 3.49
103 104 7.849804 ATTTTGATTGGTACTGTACTGCTAG 57.150 36.000 16.79 0.00 0.00 3.42
104 105 5.995565 TTGATTGGTACTGTACTGCTAGT 57.004 39.130 16.79 0.00 0.00 2.57
105 106 7.470935 TTTGATTGGTACTGTACTGCTAGTA 57.529 36.000 16.79 0.00 0.00 1.82
106 107 7.655521 TTGATTGGTACTGTACTGCTAGTAT 57.344 36.000 16.79 2.04 32.65 2.12
107 108 7.655521 TGATTGGTACTGTACTGCTAGTATT 57.344 36.000 16.79 0.00 32.65 1.89
108 109 8.756486 TGATTGGTACTGTACTGCTAGTATTA 57.244 34.615 16.79 0.00 32.65 0.98
109 110 9.363401 TGATTGGTACTGTACTGCTAGTATTAT 57.637 33.333 16.79 0.00 32.65 1.28
192 193 9.091220 GTACATCCTAATATGGACCTTTACTCT 57.909 37.037 0.00 0.00 39.17 3.24
193 194 8.568617 ACATCCTAATATGGACCTTTACTCTT 57.431 34.615 0.00 0.00 39.17 2.85
194 195 9.670442 ACATCCTAATATGGACCTTTACTCTTA 57.330 33.333 0.00 0.00 39.17 2.10
214 215 9.535878 ACTCTTATTTATTCTCTTAAAGGCTCG 57.464 33.333 0.00 0.00 0.00 5.03
215 216 8.888579 TCTTATTTATTCTCTTAAAGGCTCGG 57.111 34.615 0.00 0.00 0.00 4.63
216 217 8.701895 TCTTATTTATTCTCTTAAAGGCTCGGA 58.298 33.333 0.00 0.00 0.00 4.55
217 218 9.326413 CTTATTTATTCTCTTAAAGGCTCGGAA 57.674 33.333 0.00 0.00 0.00 4.30
218 219 7.793927 ATTTATTCTCTTAAAGGCTCGGAAG 57.206 36.000 0.00 0.00 0.00 3.46
219 220 6.540438 TTATTCTCTTAAAGGCTCGGAAGA 57.460 37.500 0.00 0.00 39.12 2.87
220 221 4.884668 TTCTCTTAAAGGCTCGGAAGAA 57.115 40.909 7.01 2.48 41.32 2.52
221 222 5.422214 TTCTCTTAAAGGCTCGGAAGAAT 57.578 39.130 7.01 0.00 41.32 2.40
222 223 5.422214 TCTCTTAAAGGCTCGGAAGAATT 57.578 39.130 7.01 0.00 41.32 2.17
223 224 5.420409 TCTCTTAAAGGCTCGGAAGAATTC 58.580 41.667 0.00 0.00 46.67 2.17
347 348 8.608844 TTTTGCGGGTATTTTGAATACAAATT 57.391 26.923 11.61 0.00 43.99 1.82
381 382 9.221933 ACGTTTAATCTTGTTCACATATAACCA 57.778 29.630 0.00 0.00 0.00 3.67
382 383 9.485591 CGTTTAATCTTGTTCACATATAACCAC 57.514 33.333 0.00 0.00 0.00 4.16
383 384 9.783256 GTTTAATCTTGTTCACATATAACCACC 57.217 33.333 0.00 0.00 0.00 4.61
385 386 9.747898 TTAATCTTGTTCACATATAACCACCTT 57.252 29.630 0.00 0.00 0.00 3.50
386 387 8.650143 AATCTTGTTCACATATAACCACCTTT 57.350 30.769 0.00 0.00 0.00 3.11
388 389 8.786826 TCTTGTTCACATATAACCACCTTTAG 57.213 34.615 0.00 0.00 0.00 1.85
389 390 8.380099 TCTTGTTCACATATAACCACCTTTAGT 58.620 33.333 0.00 0.00 0.00 2.24
391 392 8.330466 TGTTCACATATAACCACCTTTAGTTG 57.670 34.615 0.00 0.00 0.00 3.16
393 394 7.023171 TCACATATAACCACCTTTAGTTGGT 57.977 36.000 0.00 0.00 38.53 3.67
394 395 7.107542 TCACATATAACCACCTTTAGTTGGTC 58.892 38.462 0.00 0.00 35.28 4.02
395 396 7.037873 TCACATATAACCACCTTTAGTTGGTCT 60.038 37.037 0.00 0.00 35.28 3.85
397 398 8.828751 ACATATAACCACCTTTAGTTGGTCTAA 58.171 33.333 0.00 0.00 35.28 2.10
398 399 9.847224 CATATAACCACCTTTAGTTGGTCTAAT 57.153 33.333 0.00 0.00 38.27 1.73
402 403 7.991084 ACCACCTTTAGTTGGTCTAATTTAC 57.009 36.000 0.00 0.00 38.27 2.01
403 404 6.652062 ACCACCTTTAGTTGGTCTAATTTACG 59.348 38.462 0.00 0.00 38.27 3.18
404 405 6.093082 CCACCTTTAGTTGGTCTAATTTACGG 59.907 42.308 0.00 0.00 38.27 4.02
405 406 6.652062 CACCTTTAGTTGGTCTAATTTACGGT 59.348 38.462 0.00 0.00 38.27 4.83
406 407 6.875726 ACCTTTAGTTGGTCTAATTTACGGTC 59.124 38.462 0.00 0.00 38.27 4.79
407 408 6.875195 CCTTTAGTTGGTCTAATTTACGGTCA 59.125 38.462 0.00 0.00 38.27 4.02
408 409 7.388500 CCTTTAGTTGGTCTAATTTACGGTCAA 59.612 37.037 0.00 0.00 38.27 3.18
410 411 9.941325 TTTAGTTGGTCTAATTTACGGTCAATA 57.059 29.630 0.00 0.00 38.27 1.90
411 412 9.941325 TTAGTTGGTCTAATTTACGGTCAATAA 57.059 29.630 0.00 0.00 34.17 1.40
413 414 9.457436 AGTTGGTCTAATTTACGGTCAATAATT 57.543 29.630 0.00 0.00 0.00 1.40
437 438 9.723601 ATTAATTTTGAAATGTATGCACACCTT 57.276 25.926 0.00 0.00 37.54 3.50
441 442 9.723601 ATTTTGAAATGTATGCACACCTTATTT 57.276 25.926 0.00 0.00 37.54 1.40
450 451 9.800433 TGTATGCACACCTTATTTATTGAAATG 57.200 29.630 0.00 0.00 35.96 2.32
451 452 9.248291 GTATGCACACCTTATTTATTGAAATGG 57.752 33.333 0.00 0.00 35.96 3.16
452 453 7.473735 TGCACACCTTATTTATTGAAATGGA 57.526 32.000 0.00 0.00 35.96 3.41
453 454 7.546358 TGCACACCTTATTTATTGAAATGGAG 58.454 34.615 0.00 0.00 35.96 3.86
454 455 6.980397 GCACACCTTATTTATTGAAATGGAGG 59.020 38.462 10.60 10.60 41.21 4.30
458 459 7.561356 CACCTTATTTATTGAAATGGAGGGAGT 59.439 37.037 14.15 0.00 40.52 3.85
459 460 8.787818 ACCTTATTTATTGAAATGGAGGGAGTA 58.212 33.333 14.15 0.00 40.52 2.59
465 466 2.852449 TGAAATGGAGGGAGTATTGGCT 59.148 45.455 0.00 0.00 0.00 4.75
466 467 4.044308 TGAAATGGAGGGAGTATTGGCTA 58.956 43.478 0.00 0.00 0.00 3.93
467 468 4.476846 TGAAATGGAGGGAGTATTGGCTAA 59.523 41.667 0.00 0.00 0.00 3.09
468 469 4.713792 AATGGAGGGAGTATTGGCTAAG 57.286 45.455 0.00 0.00 0.00 2.18
470 471 3.731431 TGGAGGGAGTATTGGCTAAGAA 58.269 45.455 0.00 0.00 0.00 2.52
471 472 4.307259 TGGAGGGAGTATTGGCTAAGAAT 58.693 43.478 0.00 0.00 0.00 2.40
473 474 5.544176 TGGAGGGAGTATTGGCTAAGAATAG 59.456 44.000 0.00 0.00 0.00 1.73
475 476 6.270231 GGAGGGAGTATTGGCTAAGAATAGAA 59.730 42.308 0.00 0.00 0.00 2.10
476 477 7.202102 GGAGGGAGTATTGGCTAAGAATAGAAA 60.202 40.741 0.00 0.00 0.00 2.52
478 479 9.393786 AGGGAGTATTGGCTAAGAATAGAAATA 57.606 33.333 0.00 0.00 0.00 1.40
479 480 9.660180 GGGAGTATTGGCTAAGAATAGAAATAG 57.340 37.037 0.00 0.00 0.00 1.73
480 481 9.157104 GGAGTATTGGCTAAGAATAGAAATAGC 57.843 37.037 0.00 0.00 39.96 2.97
481 482 9.712305 GAGTATTGGCTAAGAATAGAAATAGCA 57.288 33.333 6.05 0.00 41.93 3.49
485 486 8.534333 TTGGCTAAGAATAGAAATAGCATACG 57.466 34.615 6.05 0.00 41.93 3.06
486 487 6.590292 TGGCTAAGAATAGAAATAGCATACGC 59.410 38.462 6.05 0.00 41.93 4.42
487 488 6.237595 GGCTAAGAATAGAAATAGCATACGCG 60.238 42.308 3.53 3.53 45.49 6.01
488 489 6.527023 GCTAAGAATAGAAATAGCATACGCGA 59.473 38.462 15.93 0.00 45.49 5.87
490 491 5.403246 AGAATAGAAATAGCATACGCGAGG 58.597 41.667 15.93 1.96 45.49 4.63
491 492 4.785511 ATAGAAATAGCATACGCGAGGT 57.214 40.909 15.93 10.61 45.49 3.85
492 493 3.454371 AGAAATAGCATACGCGAGGTT 57.546 42.857 15.93 1.63 45.49 3.50
495 496 2.882927 ATAGCATACGCGAGGTTTCA 57.117 45.000 15.93 0.00 45.49 2.69
496 497 2.658373 TAGCATACGCGAGGTTTCAA 57.342 45.000 15.93 0.00 45.49 2.69
497 498 1.803334 AGCATACGCGAGGTTTCAAA 58.197 45.000 15.93 0.00 45.49 2.69
500 501 3.190535 AGCATACGCGAGGTTTCAAAATT 59.809 39.130 15.93 0.00 45.49 1.82
501 502 3.917985 GCATACGCGAGGTTTCAAAATTT 59.082 39.130 15.93 0.00 0.00 1.82
503 504 5.741982 GCATACGCGAGGTTTCAAAATTTAT 59.258 36.000 15.93 0.00 0.00 1.40
504 505 6.252655 GCATACGCGAGGTTTCAAAATTTATT 59.747 34.615 15.93 0.00 0.00 1.40
507 508 4.262045 CGCGAGGTTTCAAAATTTATTCCG 59.738 41.667 0.00 0.00 0.00 4.30
508 509 5.395642 GCGAGGTTTCAAAATTTATTCCGA 58.604 37.500 0.00 0.00 0.00 4.55
509 510 6.033966 GCGAGGTTTCAAAATTTATTCCGAT 58.966 36.000 0.00 0.00 0.00 4.18
510 511 7.190871 GCGAGGTTTCAAAATTTATTCCGATA 58.809 34.615 0.00 0.00 0.00 2.92
528 529 8.615878 TTCCGATAAACATATGTTAATCTGGG 57.384 34.615 21.07 16.25 37.25 4.45
529 530 7.969004 TCCGATAAACATATGTTAATCTGGGA 58.031 34.615 21.07 17.94 37.25 4.37
530 531 8.433599 TCCGATAAACATATGTTAATCTGGGAA 58.566 33.333 21.07 3.55 37.25 3.97
531 532 8.721478 CCGATAAACATATGTTAATCTGGGAAG 58.279 37.037 21.07 5.44 37.25 3.46
532 533 9.273016 CGATAAACATATGTTAATCTGGGAAGT 57.727 33.333 21.07 4.11 37.25 3.01
535 536 8.980481 AAACATATGTTAATCTGGGAAGTAGG 57.020 34.615 21.07 0.00 37.25 3.18
538 539 8.211629 ACATATGTTAATCTGGGAAGTAGGAAC 58.788 37.037 1.41 0.00 0.00 3.62
539 540 6.636454 ATGTTAATCTGGGAAGTAGGAACA 57.364 37.500 0.00 0.00 0.00 3.18
540 541 6.636454 TGTTAATCTGGGAAGTAGGAACAT 57.364 37.500 0.00 0.00 0.00 2.71
541 542 7.743116 TGTTAATCTGGGAAGTAGGAACATA 57.257 36.000 0.00 0.00 0.00 2.29
542 543 7.562135 TGTTAATCTGGGAAGTAGGAACATAC 58.438 38.462 0.00 0.00 0.00 2.39
543 544 7.402071 TGTTAATCTGGGAAGTAGGAACATACT 59.598 37.037 0.00 0.00 37.61 2.12
544 545 5.878406 ATCTGGGAAGTAGGAACATACTG 57.122 43.478 0.05 0.00 36.14 2.74
545 546 4.684724 TCTGGGAAGTAGGAACATACTGT 58.315 43.478 0.05 0.00 36.14 3.55
548 2098 6.550108 TCTGGGAAGTAGGAACATACTGTATC 59.450 42.308 0.00 0.00 36.14 2.24
619 2418 5.088739 CCGTATGTTTGAAAAGACAGCATC 58.911 41.667 0.00 0.00 0.00 3.91
620 2419 4.783036 CGTATGTTTGAAAAGACAGCATCG 59.217 41.667 0.00 0.00 0.00 3.84
621 2420 5.389411 CGTATGTTTGAAAAGACAGCATCGA 60.389 40.000 0.00 0.00 0.00 3.59
622 2421 5.633830 ATGTTTGAAAAGACAGCATCGAT 57.366 34.783 0.00 0.00 0.00 3.59
623 2422 5.034554 TGTTTGAAAAGACAGCATCGATC 57.965 39.130 0.00 0.00 0.00 3.69
624 2423 4.514816 TGTTTGAAAAGACAGCATCGATCA 59.485 37.500 0.00 0.00 0.00 2.92
625 2424 5.181811 TGTTTGAAAAGACAGCATCGATCAT 59.818 36.000 0.00 0.00 0.00 2.45
677 2476 0.248539 GCATGTACGTCCGTCTCTCC 60.249 60.000 0.00 0.00 0.00 3.71
699 2498 1.131883 GAGCAAAGCTACGTCTACGGA 59.868 52.381 7.50 0.00 40.96 4.69
717 2516 3.129988 ACGGACAGATTCTTACTTACCGG 59.870 47.826 0.00 0.00 37.59 5.28
769 2568 1.465172 GAAAGGAAAGGGGCCCACT 59.535 57.895 27.72 15.98 0.00 4.00
786 2585 3.074412 CCACTCAGTAAAAATCAGGCGT 58.926 45.455 0.00 0.00 0.00 5.68
796 2596 6.882678 AGTAAAAATCAGGCGTGGTTATTAGT 59.117 34.615 5.15 2.26 0.00 2.24
812 2612 2.327325 TAGTTGAGGTTGGAGAGGCT 57.673 50.000 0.00 0.00 0.00 4.58
881 2697 3.740115 TGTTCTTTCTTCTTCCTTCCGG 58.260 45.455 0.00 0.00 0.00 5.14
894 2710 0.321653 CTTCCGGTTCCCTTGTGAGG 60.322 60.000 0.00 0.00 43.15 3.86
1013 2829 0.876399 TTCACGATGACGACGAGGAA 59.124 50.000 0.00 0.00 42.66 3.36
1036 2852 2.571096 GACGAGACGACAGACGCG 60.571 66.667 3.53 3.53 46.94 6.01
1057 2873 4.452733 CCCTCGTTGCCTCCGTCC 62.453 72.222 0.00 0.00 0.00 4.79
1198 3032 1.677552 CAGCTCCAAACGGGGTACT 59.322 57.895 0.00 0.00 37.22 2.73
1199 3033 0.899720 CAGCTCCAAACGGGGTACTA 59.100 55.000 0.00 0.00 37.22 1.82
1200 3034 0.900421 AGCTCCAAACGGGGTACTAC 59.100 55.000 0.00 0.00 37.22 2.73
1201 3035 0.900421 GCTCCAAACGGGGTACTACT 59.100 55.000 0.00 0.00 37.22 2.57
1202 3036 2.102578 GCTCCAAACGGGGTACTACTA 58.897 52.381 0.00 0.00 37.22 1.82
1203 3037 2.159184 GCTCCAAACGGGGTACTACTAC 60.159 54.545 0.00 0.00 37.22 2.73
1220 3059 3.100671 ACTACCTACCTCTGGCTTTCTG 58.899 50.000 0.00 0.00 0.00 3.02
1226 3065 1.699634 ACCTCTGGCTTTCTGCACTTA 59.300 47.619 0.00 0.00 45.15 2.24
1229 3068 2.485814 CTCTGGCTTTCTGCACTTAACC 59.514 50.000 0.00 0.00 45.15 2.85
1232 3071 3.230134 TGGCTTTCTGCACTTAACCAAT 58.770 40.909 0.00 0.00 45.15 3.16
1238 3077 6.424812 GCTTTCTGCACTTAACCAATTGATTT 59.575 34.615 7.12 2.24 42.31 2.17
1241 3080 8.984891 TTCTGCACTTAACCAATTGATTTATG 57.015 30.769 7.12 8.62 0.00 1.90
1242 3081 8.347004 TCTGCACTTAACCAATTGATTTATGA 57.653 30.769 7.12 0.00 0.00 2.15
1252 3091 9.573133 AACCAATTGATTTATGAATTTCTCGTC 57.427 29.630 7.12 0.00 0.00 4.20
1257 3096 8.777865 TTGATTTATGAATTTCTCGTCTGAGT 57.222 30.769 0.00 0.00 43.09 3.41
1258 3097 8.189709 TGATTTATGAATTTCTCGTCTGAGTG 57.810 34.615 0.00 0.00 43.09 3.51
1259 3098 8.034804 TGATTTATGAATTTCTCGTCTGAGTGA 58.965 33.333 0.00 0.00 43.09 3.41
1260 3099 7.582435 TTTATGAATTTCTCGTCTGAGTGAC 57.418 36.000 0.00 0.00 43.09 3.67
1290 3129 1.889105 GCATCGCATCCCGTCACAT 60.889 57.895 0.00 0.00 38.35 3.21
1291 3130 1.835483 GCATCGCATCCCGTCACATC 61.835 60.000 0.00 0.00 38.35 3.06
1292 3131 0.530431 CATCGCATCCCGTCACATCA 60.530 55.000 0.00 0.00 38.35 3.07
1293 3132 0.530650 ATCGCATCCCGTCACATCAC 60.531 55.000 0.00 0.00 38.35 3.06
1294 3133 1.447663 CGCATCCCGTCACATCACA 60.448 57.895 0.00 0.00 0.00 3.58
1295 3134 1.423721 CGCATCCCGTCACATCACAG 61.424 60.000 0.00 0.00 0.00 3.66
1296 3135 1.091771 GCATCCCGTCACATCACAGG 61.092 60.000 0.00 0.00 0.00 4.00
1297 3136 0.250234 CATCCCGTCACATCACAGGT 59.750 55.000 0.00 0.00 0.00 4.00
1298 3137 1.480545 CATCCCGTCACATCACAGGTA 59.519 52.381 0.00 0.00 0.00 3.08
1299 3138 0.892755 TCCCGTCACATCACAGGTAC 59.107 55.000 0.00 0.00 0.00 3.34
1300 3139 0.895530 CCCGTCACATCACAGGTACT 59.104 55.000 0.00 0.00 43.88 2.73
1301 3140 1.135083 CCCGTCACATCACAGGTACTC 60.135 57.143 0.00 0.00 34.60 2.59
1302 3141 1.135083 CCGTCACATCACAGGTACTCC 60.135 57.143 0.00 0.00 34.60 3.85
1303 3142 1.135083 CGTCACATCACAGGTACTCCC 60.135 57.143 0.00 0.00 34.60 4.30
1305 3144 2.166664 GTCACATCACAGGTACTCCCTC 59.833 54.545 0.00 0.00 43.86 4.30
1306 3145 1.482593 CACATCACAGGTACTCCCTCC 59.517 57.143 0.00 0.00 43.86 4.30
1307 3146 0.747255 CATCACAGGTACTCCCTCCG 59.253 60.000 0.00 0.00 43.86 4.63
1308 3147 0.335361 ATCACAGGTACTCCCTCCGT 59.665 55.000 0.00 0.00 43.86 4.69
1309 3148 0.113776 TCACAGGTACTCCCTCCGTT 59.886 55.000 0.00 0.00 43.86 4.44
1310 3149 0.531200 CACAGGTACTCCCTCCGTTC 59.469 60.000 0.00 0.00 43.86 3.95
1311 3150 0.614134 ACAGGTACTCCCTCCGTTCC 60.614 60.000 0.00 0.00 43.86 3.62
1312 3151 0.613853 CAGGTACTCCCTCCGTTCCA 60.614 60.000 0.00 0.00 43.86 3.53
1313 3152 0.115745 AGGTACTCCCTCCGTTCCAA 59.884 55.000 0.00 0.00 40.71 3.53
1314 3153 0.978907 GGTACTCCCTCCGTTCCAAA 59.021 55.000 0.00 0.00 0.00 3.28
1315 3154 1.558294 GGTACTCCCTCCGTTCCAAAT 59.442 52.381 0.00 0.00 0.00 2.32
1316 3155 2.026542 GGTACTCCCTCCGTTCCAAATT 60.027 50.000 0.00 0.00 0.00 1.82
1317 3156 3.198417 GGTACTCCCTCCGTTCCAAATTA 59.802 47.826 0.00 0.00 0.00 1.40
1318 3157 3.345508 ACTCCCTCCGTTCCAAATTAC 57.654 47.619 0.00 0.00 0.00 1.89
1319 3158 2.910977 ACTCCCTCCGTTCCAAATTACT 59.089 45.455 0.00 0.00 0.00 2.24
1320 3159 3.329814 ACTCCCTCCGTTCCAAATTACTT 59.670 43.478 0.00 0.00 0.00 2.24
1321 3160 3.681593 TCCCTCCGTTCCAAATTACTTG 58.318 45.455 0.00 0.00 34.52 3.16
1322 3161 3.073356 TCCCTCCGTTCCAAATTACTTGT 59.927 43.478 0.00 0.00 32.65 3.16
1323 3162 3.439129 CCCTCCGTTCCAAATTACTTGTC 59.561 47.826 0.00 0.00 32.65 3.18
1324 3163 4.324267 CCTCCGTTCCAAATTACTTGTCT 58.676 43.478 0.00 0.00 32.65 3.41
1325 3164 4.760204 CCTCCGTTCCAAATTACTTGTCTT 59.240 41.667 0.00 0.00 32.65 3.01
1326 3165 5.334879 CCTCCGTTCCAAATTACTTGTCTTG 60.335 44.000 0.00 0.00 32.65 3.02
1327 3166 5.369833 TCCGTTCCAAATTACTTGTCTTGA 58.630 37.500 0.00 0.00 32.65 3.02
1328 3167 5.823570 TCCGTTCCAAATTACTTGTCTTGAA 59.176 36.000 0.00 0.00 32.65 2.69
1329 3168 6.488683 TCCGTTCCAAATTACTTGTCTTGAAT 59.511 34.615 0.00 0.00 32.65 2.57
1330 3169 7.013846 TCCGTTCCAAATTACTTGTCTTGAATT 59.986 33.333 0.00 0.00 32.65 2.17
1331 3170 7.651704 CCGTTCCAAATTACTTGTCTTGAATTT 59.348 33.333 0.00 0.00 32.97 1.82
1332 3171 8.479280 CGTTCCAAATTACTTGTCTTGAATTTG 58.521 33.333 10.52 10.52 43.82 2.32
1333 3172 9.313118 GTTCCAAATTACTTGTCTTGAATTTGT 57.687 29.630 14.45 0.00 43.18 2.83
1334 3173 9.528018 TTCCAAATTACTTGTCTTGAATTTGTC 57.472 29.630 14.45 0.00 43.18 3.18
1335 3174 8.912988 TCCAAATTACTTGTCTTGAATTTGTCT 58.087 29.630 14.45 0.00 43.18 3.41
1342 3181 8.467402 ACTTGTCTTGAATTTGTCTAGATACG 57.533 34.615 0.00 0.00 39.77 3.06
1343 3182 8.304596 ACTTGTCTTGAATTTGTCTAGATACGA 58.695 33.333 0.00 0.00 39.77 3.43
1344 3183 9.140286 CTTGTCTTGAATTTGTCTAGATACGAA 57.860 33.333 0.00 0.00 39.77 3.85
1345 3184 9.653287 TTGTCTTGAATTTGTCTAGATACGAAT 57.347 29.630 0.00 0.00 39.77 3.34
1346 3185 9.087424 TGTCTTGAATTTGTCTAGATACGAATG 57.913 33.333 0.00 0.00 39.77 2.67
1347 3186 9.088512 GTCTTGAATTTGTCTAGATACGAATGT 57.911 33.333 0.00 0.00 39.77 2.71
1365 3204 8.019656 ACGAATGTATCTAGACCCATTTTAGT 57.980 34.615 15.99 13.81 0.00 2.24
1366 3205 7.926555 ACGAATGTATCTAGACCCATTTTAGTG 59.073 37.037 15.99 9.23 0.00 2.74
1367 3206 7.095607 CGAATGTATCTAGACCCATTTTAGTGC 60.096 40.741 15.99 5.68 0.00 4.40
1368 3207 6.808321 TGTATCTAGACCCATTTTAGTGCT 57.192 37.500 0.00 0.00 0.00 4.40
1369 3208 7.907841 TGTATCTAGACCCATTTTAGTGCTA 57.092 36.000 0.00 0.00 0.00 3.49
1370 3209 7.952671 TGTATCTAGACCCATTTTAGTGCTAG 58.047 38.462 0.00 0.00 0.00 3.42
1371 3210 7.783119 TGTATCTAGACCCATTTTAGTGCTAGA 59.217 37.037 0.00 0.00 37.74 2.43
1372 3211 7.863901 ATCTAGACCCATTTTAGTGCTAGAT 57.136 36.000 0.00 0.00 38.62 1.98
1373 3212 8.958060 ATCTAGACCCATTTTAGTGCTAGATA 57.042 34.615 0.00 0.00 40.48 1.98
1374 3213 8.179509 TCTAGACCCATTTTAGTGCTAGATAC 57.820 38.462 0.00 0.00 30.90 2.24
1375 3214 6.176014 AGACCCATTTTAGTGCTAGATACC 57.824 41.667 0.00 0.00 0.00 2.73
1376 3215 5.905913 AGACCCATTTTAGTGCTAGATACCT 59.094 40.000 0.00 0.00 0.00 3.08
1377 3216 6.042208 AGACCCATTTTAGTGCTAGATACCTC 59.958 42.308 0.00 0.00 0.00 3.85
1378 3217 5.905913 ACCCATTTTAGTGCTAGATACCTCT 59.094 40.000 0.00 0.00 35.39 3.69
1379 3218 6.183361 ACCCATTTTAGTGCTAGATACCTCTG 60.183 42.308 0.00 0.00 32.66 3.35
1380 3219 6.183361 CCCATTTTAGTGCTAGATACCTCTGT 60.183 42.308 0.00 0.00 32.66 3.41
1381 3220 7.015292 CCCATTTTAGTGCTAGATACCTCTGTA 59.985 40.741 0.00 0.00 32.66 2.74
1382 3221 8.589338 CCATTTTAGTGCTAGATACCTCTGTAT 58.411 37.037 0.00 0.00 40.41 2.29
1399 3238 9.127277 ACCTCTGTATCTAGACAAATCTAAGAC 57.873 37.037 0.00 0.00 36.98 3.01
1400 3239 9.126151 CCTCTGTATCTAGACAAATCTAAGACA 57.874 37.037 0.00 0.00 36.98 3.41
1410 3249 8.480643 AGACAAATCTAAGACAAGTAATTCGG 57.519 34.615 0.00 0.00 31.46 4.30
1411 3250 8.311836 AGACAAATCTAAGACAAGTAATTCGGA 58.688 33.333 0.00 0.00 31.46 4.55
1412 3251 8.842358 ACAAATCTAAGACAAGTAATTCGGAA 57.158 30.769 0.00 0.00 0.00 4.30
1413 3252 8.718734 ACAAATCTAAGACAAGTAATTCGGAAC 58.281 33.333 0.00 0.00 0.00 3.62
1430 3269 0.606401 AACGGAGGGAGTACGTCGAA 60.606 55.000 0.00 0.00 40.31 3.71
1453 3292 2.835701 GACGAGAGCAATGGCGTCCA 62.836 60.000 0.00 1.01 45.16 4.02
1473 3312 5.652891 GTCCACCTCTTCTACTACTTCATCA 59.347 44.000 0.00 0.00 0.00 3.07
1485 3324 1.006043 ACTTCATCAGGTCGGAGAGGA 59.994 52.381 0.00 0.00 36.95 3.71
1565 3404 2.366916 CTCCGGCCTTGTCTATGAGATT 59.633 50.000 0.00 0.00 0.00 2.40
1602 3441 2.632996 TCTTCAAGTCCAGAACCATCGT 59.367 45.455 0.00 0.00 0.00 3.73
1611 3450 0.727970 AGAACCATCGTCTCGTCTCG 59.272 55.000 0.00 0.00 0.00 4.04
1621 3460 1.004715 GTCTCGTCTCGATCCGTCTTC 60.005 57.143 4.14 0.00 34.61 2.87
1641 3480 7.168135 CGTCTTCCTTTTTCTCTTCCATTTTTG 59.832 37.037 0.00 0.00 0.00 2.44
1643 3482 6.806668 TCCTTTTTCTCTTCCATTTTTGGT 57.193 33.333 0.00 0.00 0.00 3.67
1726 3565 2.438800 TTTTGAGGGGGACGAAAACA 57.561 45.000 0.00 0.00 0.00 2.83
1728 3567 0.536460 TTGAGGGGGACGAAAACAGC 60.536 55.000 0.00 0.00 0.00 4.40
1738 3577 3.431233 GGACGAAAACAGCAACTAGTACC 59.569 47.826 0.00 0.00 0.00 3.34
1739 3578 3.054878 ACGAAAACAGCAACTAGTACCG 58.945 45.455 0.00 0.00 0.00 4.02
1758 3597 1.227823 CTCGGTGTGGCTTTGTCCA 60.228 57.895 0.00 0.00 0.00 4.02
1766 3605 0.895100 TGGCTTTGTCCACATGCCTC 60.895 55.000 18.88 2.18 42.42 4.70
1774 3613 4.100084 CACATGCCTCCTGCGGGA 62.100 66.667 15.16 15.16 45.60 5.14
1802 3641 1.880027 CAGGTGCTCCCACACTTTAAC 59.120 52.381 0.00 0.00 43.88 2.01
1805 3644 2.572290 GTGCTCCCACACTTTAACTGT 58.428 47.619 0.00 0.00 41.67 3.55
1808 3647 4.020543 TGCTCCCACACTTTAACTGTTTT 58.979 39.130 0.00 0.00 0.00 2.43
1818 3657 7.436080 CACACTTTAACTGTTTTCATCATGCTT 59.564 33.333 0.00 0.00 0.00 3.91
1888 3728 7.513190 TTTTTCGCGGGTGAATAAAATATTG 57.487 32.000 6.13 0.00 0.00 1.90
1893 3733 7.091443 TCGCGGGTGAATAAAATATTGTTTTT 58.909 30.769 6.13 0.00 33.56 1.94
2290 4130 5.565592 TCATGTAGCACTAGCCAAAAATG 57.434 39.130 0.00 0.00 43.56 2.32
2291 4131 5.009631 TCATGTAGCACTAGCCAAAAATGT 58.990 37.500 0.00 0.00 43.56 2.71
2292 4132 4.764679 TGTAGCACTAGCCAAAAATGTG 57.235 40.909 0.00 0.00 43.56 3.21
2365 4206 0.538287 GTGCAGGCCCTCTGAGTTTT 60.538 55.000 0.00 0.00 46.18 2.43
2447 4288 2.576615 AGGCAGGTTTCAGTCTCAAAC 58.423 47.619 0.00 0.00 33.65 2.93
2499 4340 1.227674 GTCGCACATGGATCCCTCC 60.228 63.158 9.90 0.00 42.45 4.30
2542 4383 1.557832 TCTTCATCGATTCCCCCGTTT 59.442 47.619 0.00 0.00 0.00 3.60
2651 4493 1.636003 GGTCCCACTTCCTCCTCAATT 59.364 52.381 0.00 0.00 0.00 2.32
2709 4551 3.786048 GCTTATTGTTCTTGCATGTACGC 59.214 43.478 5.16 0.00 0.00 4.42
2741 4583 1.351076 TGATGAGCACCCAGAGTTCA 58.649 50.000 0.00 0.00 0.00 3.18
2755 4597 4.331168 CCAGAGTTCATGTCGAATCCTTTC 59.669 45.833 0.00 0.00 35.63 2.62
2854 4697 2.603021 TGCACAAGTCTTCTCTCCTCT 58.397 47.619 0.00 0.00 0.00 3.69
2858 4701 5.952347 TGCACAAGTCTTCTCTCCTCTATAA 59.048 40.000 0.00 0.00 0.00 0.98
2888 4731 4.759516 TTTTCTTGTCCGAATAACTGGC 57.240 40.909 0.00 0.00 0.00 4.85
2953 4799 6.549364 TCTCAATCTAAAGGTTTGAAGCCAAA 59.451 34.615 0.00 0.00 39.74 3.28
2955 4801 7.560368 TCAATCTAAAGGTTTGAAGCCAAAAA 58.440 30.769 0.00 0.00 43.18 1.94
3148 4995 4.806640 TCCTCTCAATTTTGAAATGGCC 57.193 40.909 0.00 0.00 36.64 5.36
3179 5026 2.119484 TTGCCCACCGTAGTTCCCTG 62.119 60.000 0.00 0.00 0.00 4.45
3180 5027 2.267961 CCCACCGTAGTTCCCTGC 59.732 66.667 0.00 0.00 0.00 4.85
3181 5028 2.267961 CCACCGTAGTTCCCTGCC 59.732 66.667 0.00 0.00 0.00 4.85
3182 5029 2.125673 CACCGTAGTTCCCTGCCG 60.126 66.667 0.00 0.00 0.00 5.69
3224 5083 3.758554 CTCAAATCGGAAATGGTTCTGGT 59.241 43.478 0.00 0.00 40.13 4.00
3249 5108 1.774894 TTGCCTGCCGTAGTTCCCTT 61.775 55.000 0.00 0.00 0.00 3.95
3250 5109 1.745489 GCCTGCCGTAGTTCCCTTG 60.745 63.158 0.00 0.00 0.00 3.61
3459 5325 2.947652 GCTACTTGCATCCATGTGTGAT 59.052 45.455 0.00 0.00 42.31 3.06
3612 5481 0.685458 AGTGCATGGGAATTCAGCCC 60.685 55.000 7.93 0.27 46.22 5.19
3657 5526 3.305813 GCCATCGACGAGGTATCCAATTA 60.306 47.826 8.86 0.00 0.00 1.40
3699 5568 4.160252 TGCCTTTCATTTCTCCCAATTAGC 59.840 41.667 0.00 0.00 0.00 3.09
3707 5576 1.137086 TCTCCCAATTAGCGAGTCAGC 59.863 52.381 0.00 0.00 37.41 4.26
3710 5579 1.600957 CCCAATTAGCGAGTCAGCATG 59.399 52.381 9.14 0.00 40.15 4.06
3724 5593 2.874086 TCAGCATGAGTCAAGTTGTGTG 59.126 45.455 11.25 0.00 42.56 3.82
3745 5614 4.096382 GTGTTTGTGAAGTGTGTCAAGGAT 59.904 41.667 0.00 0.00 0.00 3.24
3771 5640 1.308069 CCAAACCACATCCTGGAGCG 61.308 60.000 1.52 0.00 43.95 5.03
4048 5995 0.972134 TGTCAGAGAGGCTCTTGGTG 59.028 55.000 19.80 15.97 38.99 4.17
4084 6031 3.113322 GACGTCTGAATACGCATTGCTA 58.887 45.455 8.70 0.00 46.71 3.49
4096 6043 1.133790 GCATTGCTACTTCCTGCTTGG 59.866 52.381 0.16 0.00 37.10 3.61
4100 6047 3.266510 TGCTACTTCCTGCTTGGTATG 57.733 47.619 0.00 0.00 37.07 2.39
4149 6112 1.883926 GTACATTGCAGGGAACGGTTT 59.116 47.619 0.00 0.00 0.00 3.27
4202 6165 4.493545 CGGTACACCAACGATATTTTCAGC 60.494 45.833 0.00 0.00 35.14 4.26
4309 6272 2.513204 CACGCAGGCCTGGATCAG 60.513 66.667 33.46 15.03 0.00 2.90
4383 6346 1.302832 GTTGCAGGGTGAGGACTGG 60.303 63.158 0.00 0.00 35.30 4.00
4389 6352 1.062488 AGGGTGAGGACTGGTTTGCT 61.062 55.000 0.00 0.00 0.00 3.91
4390 6353 0.178990 GGGTGAGGACTGGTTTGCTT 60.179 55.000 0.00 0.00 0.00 3.91
4418 6381 4.022416 GTCATATGGGTGTTGCAACTGAAA 60.022 41.667 28.61 13.50 0.00 2.69
4419 6382 4.218200 TCATATGGGTGTTGCAACTGAAAG 59.782 41.667 28.61 11.99 42.29 2.62
4422 6385 1.111277 GGTGTTGCAACTGAAAGGGT 58.889 50.000 28.61 0.00 39.30 4.34
4424 6387 2.024414 GTGTTGCAACTGAAAGGGTCT 58.976 47.619 28.61 0.00 39.30 3.85
4443 6406 5.104735 GGGTCTAGACTTGTTCTGATGGATT 60.105 44.000 21.88 0.00 35.55 3.01
4453 6416 3.986996 TCTGATGGATTCTCACAAGCA 57.013 42.857 0.00 0.00 0.00 3.91
4547 6510 3.026630 TGGTGTCTTCTCTTTGCTACG 57.973 47.619 0.00 0.00 0.00 3.51
4706 6673 2.063774 CCTCCGGTGGTGGTTACTT 58.936 57.895 14.67 0.00 32.24 2.24
4710 6677 0.948678 CCGGTGGTGGTTACTTTGTG 59.051 55.000 0.00 0.00 0.00 3.33
4711 6678 1.670791 CGGTGGTGGTTACTTTGTGT 58.329 50.000 0.00 0.00 0.00 3.72
4728 6721 1.266989 GTGTTTGTGCCTTGGAGCTAC 59.733 52.381 0.00 0.00 0.00 3.58
4730 6723 1.953686 GTTTGTGCCTTGGAGCTACAA 59.046 47.619 11.81 11.81 34.34 2.41
4766 6759 4.744570 AGCTTGATTCACAGATGCAAATG 58.255 39.130 0.00 0.00 0.00 2.32
4768 6761 5.047590 AGCTTGATTCACAGATGCAAATGAA 60.048 36.000 8.38 7.89 35.64 2.57
4773 6766 7.828712 TGATTCACAGATGCAAATGAATGTTA 58.171 30.769 17.63 6.38 40.88 2.41
4821 6814 1.081892 GACTGTGTGCATCGCTTGAT 58.918 50.000 0.00 0.00 0.00 2.57
4829 6822 1.647629 CATCGCTTGATGCAGAGGC 59.352 57.895 0.00 0.00 42.78 4.70
4832 6825 2.124983 GCTTGATGCAGAGGCCGA 60.125 61.111 0.00 0.00 42.31 5.54
4835 6828 1.964608 CTTGATGCAGAGGCCGAGGA 61.965 60.000 0.00 0.00 40.13 3.71
4841 6834 0.036858 GCAGAGGCCGAGGATAATCC 60.037 60.000 0.00 0.00 36.58 3.01
5019 7021 1.810030 GACTCCATCCAACGACCGC 60.810 63.158 0.00 0.00 0.00 5.68
5094 7098 6.966534 AATAATATTCCTTTCACCCTGCAG 57.033 37.500 6.78 6.78 0.00 4.41
5103 7107 3.998913 TTCACCCTGCAGTCATTATGA 57.001 42.857 13.81 4.03 0.00 2.15
5115 7119 5.182001 GCAGTCATTATGAGGACAACAAGTT 59.818 40.000 5.04 0.00 38.98 2.66
5155 7159 7.496346 TTGGTGAGGTAGATTCATCTAAGTT 57.504 36.000 0.00 0.00 40.77 2.66
5156 7160 8.603898 TTGGTGAGGTAGATTCATCTAAGTTA 57.396 34.615 0.00 0.00 40.77 2.24
5158 7162 8.861086 TGGTGAGGTAGATTCATCTAAGTTATC 58.139 37.037 0.00 0.00 40.77 1.75
5170 7174 9.567776 TTCATCTAAGTTATCTCTCTCCTACAG 57.432 37.037 0.00 0.00 0.00 2.74
5171 7175 8.939932 TCATCTAAGTTATCTCTCTCCTACAGA 58.060 37.037 0.00 0.00 0.00 3.41
5172 7176 9.739276 CATCTAAGTTATCTCTCTCCTACAGAT 57.261 37.037 0.00 0.00 0.00 2.90
5176 7180 8.918202 AAGTTATCTCTCTCCTACAGATACAG 57.082 38.462 0.00 0.00 30.43 2.74
5177 7181 8.041143 AGTTATCTCTCTCCTACAGATACAGT 57.959 38.462 0.00 0.00 30.43 3.55
5178 7182 8.154856 AGTTATCTCTCTCCTACAGATACAGTC 58.845 40.741 0.00 0.00 30.43 3.51
5179 7183 5.959583 TCTCTCTCCTACAGATACAGTCA 57.040 43.478 0.00 0.00 0.00 3.41
5180 7184 6.508030 TCTCTCTCCTACAGATACAGTCAT 57.492 41.667 0.00 0.00 0.00 3.06
5226 7261 6.909550 ATCTAGTAAATGGGCACTCTAGAG 57.090 41.667 18.49 18.49 37.74 2.43
5242 7277 7.094805 GCACTCTAGAGATCTCGACAAAGATAT 60.095 40.741 26.57 0.00 36.13 1.63
5243 7278 9.430623 CACTCTAGAGATCTCGACAAAGATATA 57.569 37.037 26.57 0.00 36.13 0.86
5292 7327 9.990868 ACCATACACATATACCTAGATATCACA 57.009 33.333 5.32 0.00 0.00 3.58
5388 7423 5.222631 CAAATTTCTTTGAGGTGTAGTGCC 58.777 41.667 0.00 0.00 43.71 5.01
5396 7431 7.455058 TCTTTGAGGTGTAGTGCCTTAAAATA 58.545 34.615 0.00 0.00 39.84 1.40
5510 7546 7.596995 GCAGTTAATTTTGCCAAGTGTAATACA 59.403 33.333 0.00 0.00 34.28 2.29
5521 7557 7.990314 TGCCAAGTGTAATACATACATGTACAT 59.010 33.333 7.96 1.41 45.87 2.29
5636 7672 7.295340 AGAGTAAAGTTCTTGGGTTGGTTAAT 58.705 34.615 0.00 0.00 0.00 1.40
5642 7678 6.548321 AGTTCTTGGGTTGGTTAATGTGATA 58.452 36.000 0.00 0.00 0.00 2.15
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
10 11 7.093552 CCATTAATCCGATGGCCCATATAAAAA 60.094 37.037 0.00 0.00 37.81 1.94
11 12 6.379703 CCATTAATCCGATGGCCCATATAAAA 59.620 38.462 0.00 0.00 37.81 1.52
12 13 5.890985 CCATTAATCCGATGGCCCATATAAA 59.109 40.000 0.00 0.00 37.81 1.40
13 14 5.044476 ACCATTAATCCGATGGCCCATATAA 60.044 40.000 0.00 0.00 46.43 0.98
14 15 4.476846 ACCATTAATCCGATGGCCCATATA 59.523 41.667 0.00 0.00 46.43 0.86
15 16 3.269381 ACCATTAATCCGATGGCCCATAT 59.731 43.478 0.00 0.00 46.43 1.78
16 17 2.647299 ACCATTAATCCGATGGCCCATA 59.353 45.455 0.00 0.00 46.43 2.74
17 18 1.428912 ACCATTAATCCGATGGCCCAT 59.571 47.619 0.00 0.00 46.43 4.00
18 19 0.850100 ACCATTAATCCGATGGCCCA 59.150 50.000 0.00 0.00 46.43 5.36
19 20 1.995376 AACCATTAATCCGATGGCCC 58.005 50.000 0.00 0.00 46.43 5.80
20 21 5.722021 ATTTAACCATTAATCCGATGGCC 57.278 39.130 0.00 0.00 46.43 5.36
21 22 7.973944 GGAATATTTAACCATTAATCCGATGGC 59.026 37.037 3.16 0.00 46.43 4.40
74 75 8.726988 GCAGTACAGTACCAATCAAAATAGAAA 58.273 33.333 7.13 0.00 0.00 2.52
75 76 8.100791 AGCAGTACAGTACCAATCAAAATAGAA 58.899 33.333 7.13 0.00 0.00 2.10
76 77 7.620880 AGCAGTACAGTACCAATCAAAATAGA 58.379 34.615 7.13 0.00 0.00 1.98
77 78 7.849804 AGCAGTACAGTACCAATCAAAATAG 57.150 36.000 7.13 0.00 0.00 1.73
78 79 8.537016 ACTAGCAGTACAGTACCAATCAAAATA 58.463 33.333 7.13 0.00 0.00 1.40
79 80 7.394816 ACTAGCAGTACAGTACCAATCAAAAT 58.605 34.615 7.13 0.00 0.00 1.82
80 81 6.765403 ACTAGCAGTACAGTACCAATCAAAA 58.235 36.000 7.13 0.00 0.00 2.44
81 82 6.354794 ACTAGCAGTACAGTACCAATCAAA 57.645 37.500 7.13 0.00 0.00 2.69
82 83 5.995565 ACTAGCAGTACAGTACCAATCAA 57.004 39.130 7.13 0.00 0.00 2.57
83 84 7.655521 AATACTAGCAGTACAGTACCAATCA 57.344 36.000 7.13 0.00 32.84 2.57
162 163 8.990693 AAAGGTCCATATTAGGATGTACCTAT 57.009 34.615 1.60 0.00 43.34 2.57
163 164 9.317827 GTAAAGGTCCATATTAGGATGTACCTA 57.682 37.037 1.60 0.00 43.34 3.08
164 165 8.017251 AGTAAAGGTCCATATTAGGATGTACCT 58.983 37.037 0.00 0.00 45.37 3.08
165 166 8.203681 AGTAAAGGTCCATATTAGGATGTACC 57.796 38.462 0.00 0.00 40.42 3.34
166 167 9.091220 AGAGTAAAGGTCCATATTAGGATGTAC 57.909 37.037 0.00 0.00 40.42 2.90
167 168 9.670442 AAGAGTAAAGGTCCATATTAGGATGTA 57.330 33.333 0.00 0.00 40.42 2.29
168 169 8.568617 AAGAGTAAAGGTCCATATTAGGATGT 57.431 34.615 0.00 0.00 40.42 3.06
188 189 9.535878 CGAGCCTTTAAGAGAATAAATAAGAGT 57.464 33.333 0.00 0.00 0.00 3.24
189 190 8.983724 CCGAGCCTTTAAGAGAATAAATAAGAG 58.016 37.037 0.00 0.00 0.00 2.85
190 191 8.701895 TCCGAGCCTTTAAGAGAATAAATAAGA 58.298 33.333 0.00 0.00 0.00 2.10
191 192 8.888579 TCCGAGCCTTTAAGAGAATAAATAAG 57.111 34.615 0.00 0.00 0.00 1.73
192 193 9.326413 CTTCCGAGCCTTTAAGAGAATAAATAA 57.674 33.333 0.00 0.00 0.00 1.40
193 194 8.701895 TCTTCCGAGCCTTTAAGAGAATAAATA 58.298 33.333 0.00 0.00 0.00 1.40
194 195 7.565680 TCTTCCGAGCCTTTAAGAGAATAAAT 58.434 34.615 0.00 0.00 0.00 1.40
195 196 6.942976 TCTTCCGAGCCTTTAAGAGAATAAA 58.057 36.000 0.00 0.00 0.00 1.40
196 197 6.540438 TCTTCCGAGCCTTTAAGAGAATAA 57.460 37.500 0.00 0.00 0.00 1.40
197 198 6.540438 TTCTTCCGAGCCTTTAAGAGAATA 57.460 37.500 0.00 0.00 30.19 1.75
198 199 5.422214 TTCTTCCGAGCCTTTAAGAGAAT 57.578 39.130 0.00 0.00 30.19 2.40
199 200 4.884668 TTCTTCCGAGCCTTTAAGAGAA 57.115 40.909 0.00 0.00 30.19 2.87
200 201 5.420409 GAATTCTTCCGAGCCTTTAAGAGA 58.580 41.667 0.00 0.00 30.19 3.10
201 202 4.572795 GGAATTCTTCCGAGCCTTTAAGAG 59.427 45.833 5.23 0.00 40.59 2.85
202 203 4.514401 GGAATTCTTCCGAGCCTTTAAGA 58.486 43.478 5.23 0.00 40.59 2.10
203 204 4.884458 GGAATTCTTCCGAGCCTTTAAG 57.116 45.455 5.23 0.00 40.59 1.85
321 322 8.608844 ATTTGTATTCAAAATACCCGCAAAAA 57.391 26.923 1.36 1.97 44.97 1.94
322 323 8.608844 AATTTGTATTCAAAATACCCGCAAAA 57.391 26.923 1.36 2.52 44.97 2.44
323 324 7.872993 TGAATTTGTATTCAAAATACCCGCAAA 59.127 29.630 1.36 0.00 45.38 3.68
324 325 7.378966 TGAATTTGTATTCAAAATACCCGCAA 58.621 30.769 1.36 0.00 45.38 4.85
325 326 6.925211 TGAATTTGTATTCAAAATACCCGCA 58.075 32.000 1.36 0.00 45.38 5.69
351 352 5.579384 TGTGAACAAGATTAAACGTACCG 57.421 39.130 0.00 0.00 0.00 4.02
357 358 9.783256 GGTGGTTATATGTGAACAAGATTAAAC 57.217 33.333 0.00 0.00 0.00 2.01
358 359 9.747898 AGGTGGTTATATGTGAACAAGATTAAA 57.252 29.630 0.00 0.00 0.00 1.52
359 360 9.747898 AAGGTGGTTATATGTGAACAAGATTAA 57.252 29.630 0.00 0.00 0.00 1.40
363 364 8.380099 ACTAAAGGTGGTTATATGTGAACAAGA 58.620 33.333 0.00 0.00 0.00 3.02
367 368 7.392393 ACCAACTAAAGGTGGTTATATGTGAAC 59.608 37.037 14.08 0.00 38.13 3.18
370 371 7.110155 AGACCAACTAAAGGTGGTTATATGTG 58.890 38.462 20.37 0.00 40.09 3.21
371 372 7.266905 AGACCAACTAAAGGTGGTTATATGT 57.733 36.000 20.37 0.00 40.09 2.29
372 373 9.847224 ATTAGACCAACTAAAGGTGGTTATATG 57.153 33.333 20.37 0.00 43.15 1.78
376 377 9.506018 GTAAATTAGACCAACTAAAGGTGGTTA 57.494 33.333 20.37 11.74 43.15 2.85
378 379 6.652062 CGTAAATTAGACCAACTAAAGGTGGT 59.348 38.462 19.57 19.57 43.15 4.16
379 380 6.093082 CCGTAAATTAGACCAACTAAAGGTGG 59.907 42.308 12.62 12.62 43.15 4.61
380 381 6.652062 ACCGTAAATTAGACCAACTAAAGGTG 59.348 38.462 0.00 0.00 43.15 4.00
381 382 6.772605 ACCGTAAATTAGACCAACTAAAGGT 58.227 36.000 0.00 0.00 43.15 3.50
382 383 6.875195 TGACCGTAAATTAGACCAACTAAAGG 59.125 38.462 0.00 0.00 43.15 3.11
383 384 7.894376 TGACCGTAAATTAGACCAACTAAAG 57.106 36.000 0.00 0.00 43.15 1.85
385 386 9.941325 TTATTGACCGTAAATTAGACCAACTAA 57.059 29.630 0.00 0.00 43.89 2.24
410 411 9.723601 AGGTGTGCATACATTTCAAAATTAATT 57.276 25.926 15.93 0.00 39.39 1.40
411 412 9.723601 AAGGTGTGCATACATTTCAAAATTAAT 57.276 25.926 15.93 0.00 39.39 1.40
419 420 9.800433 CAATAAATAAGGTGTGCATACATTTCA 57.200 29.630 18.47 2.38 39.39 2.69
424 425 9.800433 CATTTCAATAAATAAGGTGTGCATACA 57.200 29.630 15.93 0.00 33.45 2.29
425 426 9.248291 CCATTTCAATAAATAAGGTGTGCATAC 57.752 33.333 4.79 4.79 33.45 2.39
426 427 9.194972 TCCATTTCAATAAATAAGGTGTGCATA 57.805 29.630 0.00 0.00 33.45 3.14
427 428 8.076910 TCCATTTCAATAAATAAGGTGTGCAT 57.923 30.769 0.00 0.00 33.45 3.96
428 429 7.363705 CCTCCATTTCAATAAATAAGGTGTGCA 60.364 37.037 0.00 0.00 34.96 4.57
429 430 6.980397 CCTCCATTTCAATAAATAAGGTGTGC 59.020 38.462 0.00 0.00 34.96 4.57
430 431 7.341769 TCCCTCCATTTCAATAAATAAGGTGTG 59.658 37.037 0.00 0.00 36.42 3.82
431 432 7.418378 TCCCTCCATTTCAATAAATAAGGTGT 58.582 34.615 0.00 0.00 36.42 4.16
432 433 7.561356 ACTCCCTCCATTTCAATAAATAAGGTG 59.439 37.037 0.00 0.00 36.42 4.00
433 434 7.652554 ACTCCCTCCATTTCAATAAATAAGGT 58.347 34.615 0.00 0.00 36.42 3.50
434 435 9.813826 ATACTCCCTCCATTTCAATAAATAAGG 57.186 33.333 0.00 0.00 37.16 2.69
437 438 9.586732 CCAATACTCCCTCCATTTCAATAAATA 57.413 33.333 0.00 0.00 33.45 1.40
438 439 7.015584 GCCAATACTCCCTCCATTTCAATAAAT 59.984 37.037 0.00 0.00 35.65 1.40
439 440 6.323739 GCCAATACTCCCTCCATTTCAATAAA 59.676 38.462 0.00 0.00 0.00 1.40
441 442 5.134339 AGCCAATACTCCCTCCATTTCAATA 59.866 40.000 0.00 0.00 0.00 1.90
442 443 4.078980 AGCCAATACTCCCTCCATTTCAAT 60.079 41.667 0.00 0.00 0.00 2.57
443 444 3.269381 AGCCAATACTCCCTCCATTTCAA 59.731 43.478 0.00 0.00 0.00 2.69
444 445 2.852449 AGCCAATACTCCCTCCATTTCA 59.148 45.455 0.00 0.00 0.00 2.69
446 447 4.726825 TCTTAGCCAATACTCCCTCCATTT 59.273 41.667 0.00 0.00 0.00 2.32
448 449 3.941629 TCTTAGCCAATACTCCCTCCAT 58.058 45.455 0.00 0.00 0.00 3.41
449 450 3.414759 TCTTAGCCAATACTCCCTCCA 57.585 47.619 0.00 0.00 0.00 3.86
450 451 4.984146 ATTCTTAGCCAATACTCCCTCC 57.016 45.455 0.00 0.00 0.00 4.30
451 452 6.919775 TCTATTCTTAGCCAATACTCCCTC 57.080 41.667 0.00 0.00 0.00 4.30
452 453 7.691993 TTTCTATTCTTAGCCAATACTCCCT 57.308 36.000 0.00 0.00 0.00 4.20
453 454 9.660180 CTATTTCTATTCTTAGCCAATACTCCC 57.340 37.037 0.00 0.00 0.00 4.30
454 455 9.157104 GCTATTTCTATTCTTAGCCAATACTCC 57.843 37.037 0.00 0.00 32.72 3.85
459 460 9.155975 CGTATGCTATTTCTATTCTTAGCCAAT 57.844 33.333 0.00 0.00 36.97 3.16
461 462 6.590292 GCGTATGCTATTTCTATTCTTAGCCA 59.410 38.462 0.00 0.00 36.97 4.75
462 463 6.237595 CGCGTATGCTATTTCTATTCTTAGCC 60.238 42.308 5.20 0.00 39.65 3.93
465 466 7.027760 CCTCGCGTATGCTATTTCTATTCTTA 58.972 38.462 5.77 0.00 39.65 2.10
466 467 5.864474 CCTCGCGTATGCTATTTCTATTCTT 59.136 40.000 5.77 0.00 39.65 2.52
467 468 5.047943 ACCTCGCGTATGCTATTTCTATTCT 60.048 40.000 5.77 0.00 39.65 2.40
468 469 5.162075 ACCTCGCGTATGCTATTTCTATTC 58.838 41.667 5.77 0.00 39.65 1.75
470 471 4.785511 ACCTCGCGTATGCTATTTCTAT 57.214 40.909 5.77 0.00 39.65 1.98
471 472 4.579454 AACCTCGCGTATGCTATTTCTA 57.421 40.909 5.77 0.00 39.65 2.10
473 474 3.554324 TGAAACCTCGCGTATGCTATTTC 59.446 43.478 5.77 9.50 39.65 2.17
475 476 3.173668 TGAAACCTCGCGTATGCTATT 57.826 42.857 5.77 0.00 39.65 1.73
476 477 2.882927 TGAAACCTCGCGTATGCTAT 57.117 45.000 5.77 0.00 39.65 2.97
478 479 1.803334 TTTGAAACCTCGCGTATGCT 58.197 45.000 5.77 0.00 39.65 3.79
479 480 2.604969 TTTTGAAACCTCGCGTATGC 57.395 45.000 5.77 0.00 37.91 3.14
480 481 7.044314 GGAATAAATTTTGAAACCTCGCGTATG 60.044 37.037 5.77 0.00 0.00 2.39
481 482 6.970613 GGAATAAATTTTGAAACCTCGCGTAT 59.029 34.615 5.77 0.00 0.00 3.06
482 483 6.316319 GGAATAAATTTTGAAACCTCGCGTA 58.684 36.000 5.77 0.00 0.00 4.42
483 484 5.158494 GGAATAAATTTTGAAACCTCGCGT 58.842 37.500 5.77 0.00 0.00 6.01
484 485 4.262045 CGGAATAAATTTTGAAACCTCGCG 59.738 41.667 0.00 0.00 0.00 5.87
485 486 5.395642 TCGGAATAAATTTTGAAACCTCGC 58.604 37.500 0.00 0.00 0.00 5.03
486 487 9.562583 TTTATCGGAATAAATTTTGAAACCTCG 57.437 29.630 0.00 0.00 33.41 4.63
503 504 8.433599 TCCCAGATTAACATATGTTTATCGGAA 58.566 33.333 32.06 22.80 44.28 4.30
504 505 7.969004 TCCCAGATTAACATATGTTTATCGGA 58.031 34.615 32.06 28.71 44.28 4.55
510 511 8.778059 TCCTACTTCCCAGATTAACATATGTTT 58.222 33.333 25.31 9.42 39.31 2.83
513 514 8.210946 TGTTCCTACTTCCCAGATTAACATATG 58.789 37.037 0.00 0.00 0.00 1.78
514 515 8.331931 TGTTCCTACTTCCCAGATTAACATAT 57.668 34.615 0.00 0.00 0.00 1.78
515 516 7.743116 TGTTCCTACTTCCCAGATTAACATA 57.257 36.000 0.00 0.00 0.00 2.29
517 518 6.636454 ATGTTCCTACTTCCCAGATTAACA 57.364 37.500 0.00 0.00 0.00 2.41
519 520 7.792032 CAGTATGTTCCTACTTCCCAGATTAA 58.208 38.462 0.00 0.00 29.41 1.40
520 521 7.361457 CAGTATGTTCCTACTTCCCAGATTA 57.639 40.000 0.00 0.00 29.41 1.75
568 2118 6.990939 GGGCGGTAGAAATTTAGTCTAGATTT 59.009 38.462 7.85 7.85 0.00 2.17
619 2418 3.444916 ACAGCTGGTTTACGTATGATCG 58.555 45.455 19.93 0.00 0.00 3.69
620 2419 5.828747 TCTACAGCTGGTTTACGTATGATC 58.171 41.667 19.93 0.00 0.00 2.92
621 2420 5.847111 TCTACAGCTGGTTTACGTATGAT 57.153 39.130 19.93 0.00 0.00 2.45
622 2421 5.648178 TTCTACAGCTGGTTTACGTATGA 57.352 39.130 19.93 0.00 0.00 2.15
623 2422 6.018994 GGATTTCTACAGCTGGTTTACGTATG 60.019 42.308 19.93 0.00 0.00 2.39
624 2423 6.047231 GGATTTCTACAGCTGGTTTACGTAT 58.953 40.000 19.93 0.73 0.00 3.06
625 2424 5.413499 GGATTTCTACAGCTGGTTTACGTA 58.587 41.667 19.93 0.00 0.00 3.57
677 2476 1.546834 GTAGACGTAGCTTTGCTCGG 58.453 55.000 0.00 3.44 40.44 4.63
699 2498 6.070938 AGCTTAACCGGTAAGTAAGAATCTGT 60.071 38.462 22.94 0.26 41.28 3.41
717 2516 2.113860 TCCTGCCACATCAGCTTAAC 57.886 50.000 0.00 0.00 32.87 2.01
769 2568 3.134574 ACCACGCCTGATTTTTACTGA 57.865 42.857 0.00 0.00 0.00 3.41
786 2585 5.045869 CCTCTCCAACCTCAACTAATAACCA 60.046 44.000 0.00 0.00 0.00 3.67
796 2596 1.544825 CCGAGCCTCTCCAACCTCAA 61.545 60.000 0.00 0.00 0.00 3.02
812 2612 2.355310 CCCAAAATGCTACACCTACCGA 60.355 50.000 0.00 0.00 0.00 4.69
881 2697 2.328099 CGCAGCCTCACAAGGGAAC 61.328 63.158 0.00 0.00 43.58 3.62
959 2775 4.320928 CTCCCTCTCGCGCGCTAG 62.321 72.222 30.48 27.70 0.00 3.42
960 2776 4.851179 TCTCCCTCTCGCGCGCTA 62.851 66.667 30.48 18.56 0.00 4.26
1013 2829 0.609151 TCTGTCGTCTCGTCTCCTCT 59.391 55.000 0.00 0.00 0.00 3.69
1057 2873 0.686112 AGAAGGAGGAGGAAGAGGCG 60.686 60.000 0.00 0.00 0.00 5.52
1170 3004 2.142292 TTTGGAGCTGGAAGGGGAGC 62.142 60.000 0.00 0.00 35.28 4.70
1198 3032 4.279145 CAGAAAGCCAGAGGTAGGTAGTA 58.721 47.826 0.00 0.00 0.00 1.82
1199 3033 3.100671 CAGAAAGCCAGAGGTAGGTAGT 58.899 50.000 0.00 0.00 0.00 2.73
1200 3034 2.159028 GCAGAAAGCCAGAGGTAGGTAG 60.159 54.545 0.00 0.00 37.23 3.18
1201 3035 1.831736 GCAGAAAGCCAGAGGTAGGTA 59.168 52.381 0.00 0.00 37.23 3.08
1202 3036 0.615850 GCAGAAAGCCAGAGGTAGGT 59.384 55.000 0.00 0.00 37.23 3.08
1203 3037 0.615331 TGCAGAAAGCCAGAGGTAGG 59.385 55.000 0.00 0.00 44.83 3.18
1226 3065 9.573133 GACGAGAAATTCATAAATCAATTGGTT 57.427 29.630 5.42 0.78 0.00 3.67
1229 3068 9.992910 TCAGACGAGAAATTCATAAATCAATTG 57.007 29.630 0.00 0.00 0.00 2.32
1232 3071 8.659491 CACTCAGACGAGAAATTCATAAATCAA 58.341 33.333 0.00 0.00 42.34 2.57
1273 3112 0.530431 TGATGTGACGGGATGCGATG 60.530 55.000 0.00 0.00 0.00 3.84
1282 3121 1.135083 GGAGTACCTGTGATGTGACGG 60.135 57.143 0.00 0.00 0.00 4.79
1295 3134 0.978907 TTTGGAACGGAGGGAGTACC 59.021 55.000 0.00 0.00 40.67 3.34
1296 3135 3.345508 AATTTGGAACGGAGGGAGTAC 57.654 47.619 0.00 0.00 0.00 2.73
1297 3136 4.098894 AGTAATTTGGAACGGAGGGAGTA 58.901 43.478 0.00 0.00 0.00 2.59
1298 3137 2.910977 AGTAATTTGGAACGGAGGGAGT 59.089 45.455 0.00 0.00 0.00 3.85
1299 3138 3.629142 AGTAATTTGGAACGGAGGGAG 57.371 47.619 0.00 0.00 0.00 4.30
1300 3139 3.073356 ACAAGTAATTTGGAACGGAGGGA 59.927 43.478 0.00 0.00 41.25 4.20
1301 3140 3.418047 ACAAGTAATTTGGAACGGAGGG 58.582 45.455 0.00 0.00 41.25 4.30
1302 3141 4.324267 AGACAAGTAATTTGGAACGGAGG 58.676 43.478 0.00 0.00 41.25 4.30
1303 3142 5.468746 TCAAGACAAGTAATTTGGAACGGAG 59.531 40.000 0.00 0.00 41.25 4.63
1304 3143 5.369833 TCAAGACAAGTAATTTGGAACGGA 58.630 37.500 0.00 0.00 41.25 4.69
1305 3144 5.682943 TCAAGACAAGTAATTTGGAACGG 57.317 39.130 0.00 0.00 41.25 4.44
1306 3145 8.479280 CAAATTCAAGACAAGTAATTTGGAACG 58.521 33.333 10.17 0.00 41.93 3.95
1307 3146 9.313118 ACAAATTCAAGACAAGTAATTTGGAAC 57.687 29.630 18.33 0.00 46.31 3.62
1308 3147 9.528018 GACAAATTCAAGACAAGTAATTTGGAA 57.472 29.630 18.33 0.00 46.31 3.53
1309 3148 8.912988 AGACAAATTCAAGACAAGTAATTTGGA 58.087 29.630 18.33 1.48 46.31 3.53
1316 3155 9.569167 CGTATCTAGACAAATTCAAGACAAGTA 57.431 33.333 0.00 0.00 0.00 2.24
1317 3156 8.304596 TCGTATCTAGACAAATTCAAGACAAGT 58.695 33.333 0.00 0.00 0.00 3.16
1318 3157 8.689251 TCGTATCTAGACAAATTCAAGACAAG 57.311 34.615 0.00 0.00 0.00 3.16
1319 3158 9.653287 ATTCGTATCTAGACAAATTCAAGACAA 57.347 29.630 0.00 0.00 0.00 3.18
1320 3159 9.087424 CATTCGTATCTAGACAAATTCAAGACA 57.913 33.333 0.00 0.00 0.00 3.41
1321 3160 9.088512 ACATTCGTATCTAGACAAATTCAAGAC 57.911 33.333 0.00 0.00 0.00 3.01
1339 3178 9.139734 ACTAAAATGGGTCTAGATACATTCGTA 57.860 33.333 19.09 14.66 32.80 3.43
1340 3179 7.926555 CACTAAAATGGGTCTAGATACATTCGT 59.073 37.037 19.09 14.89 32.80 3.85
1341 3180 7.095607 GCACTAAAATGGGTCTAGATACATTCG 60.096 40.741 19.09 14.47 32.80 3.34
1342 3181 7.934120 AGCACTAAAATGGGTCTAGATACATTC 59.066 37.037 19.09 9.96 32.80 2.67
1343 3182 7.806180 AGCACTAAAATGGGTCTAGATACATT 58.194 34.615 15.24 15.24 35.24 2.71
1344 3183 7.380423 AGCACTAAAATGGGTCTAGATACAT 57.620 36.000 0.00 0.76 0.00 2.29
1345 3184 6.808321 AGCACTAAAATGGGTCTAGATACA 57.192 37.500 0.00 0.00 0.00 2.29
1346 3185 8.179509 TCTAGCACTAAAATGGGTCTAGATAC 57.820 38.462 0.00 0.00 29.74 2.24
1347 3186 8.958060 ATCTAGCACTAAAATGGGTCTAGATA 57.042 34.615 0.00 0.00 39.33 1.98
1348 3187 7.863901 ATCTAGCACTAAAATGGGTCTAGAT 57.136 36.000 0.00 0.00 37.49 1.98
1349 3188 7.232941 GGTATCTAGCACTAAAATGGGTCTAGA 59.767 40.741 0.00 0.00 36.50 2.43
1350 3189 7.233757 AGGTATCTAGCACTAAAATGGGTCTAG 59.766 40.741 0.00 0.00 0.00 2.43
1351 3190 7.073854 AGGTATCTAGCACTAAAATGGGTCTA 58.926 38.462 0.00 0.00 0.00 2.59
1352 3191 5.905913 AGGTATCTAGCACTAAAATGGGTCT 59.094 40.000 0.00 0.00 0.00 3.85
1353 3192 6.042208 AGAGGTATCTAGCACTAAAATGGGTC 59.958 42.308 0.00 0.00 32.54 4.46
1354 3193 5.905913 AGAGGTATCTAGCACTAAAATGGGT 59.094 40.000 0.00 0.00 32.54 4.51
1355 3194 6.183361 ACAGAGGTATCTAGCACTAAAATGGG 60.183 42.308 0.00 0.00 33.22 4.00
1356 3195 6.821388 ACAGAGGTATCTAGCACTAAAATGG 58.179 40.000 0.00 0.00 33.22 3.16
1373 3212 9.127277 GTCTTAGATTTGTCTAGATACAGAGGT 57.873 37.037 0.00 0.00 0.00 3.85
1374 3213 9.126151 TGTCTTAGATTTGTCTAGATACAGAGG 57.874 37.037 0.00 0.00 0.00 3.69
1384 3223 9.582431 CCGAATTACTTGTCTTAGATTTGTCTA 57.418 33.333 0.00 0.00 0.00 2.59
1385 3224 8.311836 TCCGAATTACTTGTCTTAGATTTGTCT 58.688 33.333 0.00 0.00 0.00 3.41
1386 3225 8.475331 TCCGAATTACTTGTCTTAGATTTGTC 57.525 34.615 0.00 0.00 0.00 3.18
1387 3226 8.718734 GTTCCGAATTACTTGTCTTAGATTTGT 58.281 33.333 0.00 0.00 0.00 2.83
1388 3227 7.898309 CGTTCCGAATTACTTGTCTTAGATTTG 59.102 37.037 0.00 0.00 0.00 2.32
1389 3228 7.064253 CCGTTCCGAATTACTTGTCTTAGATTT 59.936 37.037 0.00 0.00 0.00 2.17
1390 3229 6.534079 CCGTTCCGAATTACTTGTCTTAGATT 59.466 38.462 0.00 0.00 0.00 2.40
1391 3230 6.040878 CCGTTCCGAATTACTTGTCTTAGAT 58.959 40.000 0.00 0.00 0.00 1.98
1392 3231 5.183713 TCCGTTCCGAATTACTTGTCTTAGA 59.816 40.000 0.00 0.00 0.00 2.10
1393 3232 5.404946 TCCGTTCCGAATTACTTGTCTTAG 58.595 41.667 0.00 0.00 0.00 2.18
1394 3233 5.389859 TCCGTTCCGAATTACTTGTCTTA 57.610 39.130 0.00 0.00 0.00 2.10
1395 3234 4.243270 CTCCGTTCCGAATTACTTGTCTT 58.757 43.478 0.00 0.00 0.00 3.01
1396 3235 3.368116 CCTCCGTTCCGAATTACTTGTCT 60.368 47.826 0.00 0.00 0.00 3.41
1397 3236 2.928116 CCTCCGTTCCGAATTACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
1398 3237 2.354403 CCCTCCGTTCCGAATTACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
1399 3238 2.093869 TCCCTCCGTTCCGAATTACTTG 60.094 50.000 0.00 0.00 0.00 3.16
1400 3239 2.167900 CTCCCTCCGTTCCGAATTACTT 59.832 50.000 0.00 0.00 0.00 2.24
1401 3240 1.755380 CTCCCTCCGTTCCGAATTACT 59.245 52.381 0.00 0.00 0.00 2.24
1402 3241 1.479730 ACTCCCTCCGTTCCGAATTAC 59.520 52.381 0.00 0.00 0.00 1.89
1403 3242 1.856629 ACTCCCTCCGTTCCGAATTA 58.143 50.000 0.00 0.00 0.00 1.40
1404 3243 1.479730 GTACTCCCTCCGTTCCGAATT 59.520 52.381 0.00 0.00 0.00 2.17
1405 3244 1.109609 GTACTCCCTCCGTTCCGAAT 58.890 55.000 0.00 0.00 0.00 3.34
1406 3245 1.308069 CGTACTCCCTCCGTTCCGAA 61.308 60.000 0.00 0.00 0.00 4.30
1407 3246 1.746615 CGTACTCCCTCCGTTCCGA 60.747 63.158 0.00 0.00 0.00 4.55
1408 3247 1.986575 GACGTACTCCCTCCGTTCCG 61.987 65.000 0.00 0.00 34.51 4.30
1409 3248 1.805910 GACGTACTCCCTCCGTTCC 59.194 63.158 0.00 0.00 34.51 3.62
1410 3249 1.021390 TCGACGTACTCCCTCCGTTC 61.021 60.000 0.00 0.00 34.51 3.95
1411 3250 0.606401 TTCGACGTACTCCCTCCGTT 60.606 55.000 0.00 0.00 34.51 4.44
1412 3251 1.003355 TTCGACGTACTCCCTCCGT 60.003 57.895 0.00 0.00 37.56 4.69
1413 3252 1.023513 ACTTCGACGTACTCCCTCCG 61.024 60.000 0.00 0.00 0.00 4.63
1414 3253 0.450983 CACTTCGACGTACTCCCTCC 59.549 60.000 0.00 0.00 0.00 4.30
1415 3254 0.450983 CCACTTCGACGTACTCCCTC 59.549 60.000 0.00 0.00 0.00 4.30
1416 3255 0.037303 TCCACTTCGACGTACTCCCT 59.963 55.000 0.00 0.00 0.00 4.20
1417 3256 0.169894 GTCCACTTCGACGTACTCCC 59.830 60.000 0.00 0.00 0.00 4.30
1418 3257 3.691110 GTCCACTTCGACGTACTCC 57.309 57.895 0.00 0.00 0.00 3.85
1430 3269 1.078848 GCCATTGCTCTCGTCCACT 60.079 57.895 0.00 0.00 33.53 4.00
1453 3292 5.833340 ACCTGATGAAGTAGTAGAAGAGGT 58.167 41.667 0.00 0.00 0.00 3.85
1494 3333 0.390860 CAGATCATGACGGGGTCCTC 59.609 60.000 0.00 0.00 0.00 3.71
1579 3418 2.550830 TGGTTCTGGACTTGAAGAGC 57.449 50.000 0.00 0.00 0.00 4.09
1602 3441 1.288350 GAAGACGGATCGAGACGAGA 58.712 55.000 16.95 0.00 39.91 4.04
1611 3450 4.632251 GGAAGAGAAAAAGGAAGACGGATC 59.368 45.833 0.00 0.00 0.00 3.36
1621 3460 6.479990 GTCACCAAAAATGGAAGAGAAAAAGG 59.520 38.462 1.10 0.00 0.00 3.11
1641 3480 3.005897 ACAGATATAGATGCACGGTCACC 59.994 47.826 0.00 0.00 0.00 4.02
1643 3482 3.058224 CGACAGATATAGATGCACGGTCA 60.058 47.826 0.00 0.00 0.00 4.02
1716 3555 3.431233 GGTACTAGTTGCTGTTTTCGTCC 59.569 47.826 0.00 0.00 0.00 4.79
1717 3556 3.120782 CGGTACTAGTTGCTGTTTTCGTC 59.879 47.826 0.00 0.00 0.00 4.20
1718 3557 3.054878 CGGTACTAGTTGCTGTTTTCGT 58.945 45.455 0.00 0.00 0.00 3.85
1726 3565 1.807886 CCGAGCGGTACTAGTTGCT 59.192 57.895 14.51 14.51 41.11 3.91
1738 3577 2.954753 GACAAAGCCACACCGAGCG 61.955 63.158 0.00 0.00 0.00 5.03
1739 3578 2.617274 GGACAAAGCCACACCGAGC 61.617 63.158 0.00 0.00 0.00 5.03
1774 3613 3.763897 GTGTGGGAGCACCTGATATTTTT 59.236 43.478 0.00 0.00 41.11 1.94
1802 3641 7.473027 AAAGTTTGAAGCATGATGAAAACAG 57.527 32.000 18.49 0.00 31.53 3.16
1869 3709 6.879188 AAAACAATATTTTATTCACCCGCG 57.121 33.333 0.00 0.00 0.00 6.46
1886 3726 8.545229 AATGTCTTGTGAACATTCAAAAACAA 57.455 26.923 12.45 6.16 39.21 2.83
1888 3728 9.824534 AAAAATGTCTTGTGAACATTCAAAAAC 57.175 25.926 2.29 0.70 39.21 2.43
1916 3756 7.332557 TGCGTCTGAACTTTTTAGGGATTATA 58.667 34.615 0.00 0.00 0.00 0.98
1918 3758 5.553123 TGCGTCTGAACTTTTTAGGGATTA 58.447 37.500 0.00 0.00 0.00 1.75
1936 3776 4.553429 CCTTGTGTATTTCGAATTTGCGTC 59.447 41.667 0.00 0.00 0.00 5.19
1939 3779 5.938322 TCTCCTTGTGTATTTCGAATTTGC 58.062 37.500 0.00 0.00 0.00 3.68
2017 3857 5.552870 AGAGAAATATGGGTGCGAATAGT 57.447 39.130 0.00 0.00 0.00 2.12
2080 3920 6.549364 AGACATGTGTTCACATTCCCTAAAAA 59.451 34.615 14.65 0.00 0.00 1.94
2128 3968 4.906747 TGCTAGCATTTTCCCCAAAAAT 57.093 36.364 14.93 0.00 46.23 1.82
2133 3973 1.688942 CCCATGCTAGCATTTTCCCCA 60.689 52.381 27.59 0.00 33.90 4.96
2134 3974 1.043022 CCCATGCTAGCATTTTCCCC 58.957 55.000 27.59 0.00 33.90 4.81
2135 3975 2.071778 TCCCATGCTAGCATTTTCCC 57.928 50.000 27.59 0.00 33.90 3.97
2165 4005 1.284491 TGCATATCCAGTGCTCCCAAA 59.716 47.619 0.00 0.00 42.92 3.28
2166 4006 0.918258 TGCATATCCAGTGCTCCCAA 59.082 50.000 0.00 0.00 42.92 4.12
2201 4041 2.704572 AGAAGTGGATTTGCTTCGAGG 58.295 47.619 0.00 0.00 44.07 4.63
2499 4340 0.824109 TATTGCTCACCTGGGAGACG 59.176 55.000 14.12 0.00 37.05 4.18
2542 4383 0.524862 GAGTACGAGAAGCCGGTTCA 59.475 55.000 12.65 0.00 37.67 3.18
2651 4493 1.972795 GTACTAGTGGTGGTTGGGTGA 59.027 52.381 5.39 0.00 0.00 4.02
2709 4551 1.664016 GCTCATCAAACCACTGCAACG 60.664 52.381 0.00 0.00 0.00 4.10
2741 4583 3.617263 GCAACGTAGAAAGGATTCGACAT 59.383 43.478 0.00 0.00 40.10 3.06
2877 4720 7.595502 CCTAGAAGTTATACAGCCAGTTATTCG 59.404 40.741 0.00 0.00 0.00 3.34
2881 4724 6.437755 TCCCTAGAAGTTATACAGCCAGTTA 58.562 40.000 0.00 0.00 0.00 2.24
3001 4847 1.563924 ATTGTGTACTACAGGCGGGA 58.436 50.000 0.00 0.00 41.10 5.14
3038 4884 8.408601 TCTCCAAATTGAGAGAAAAAGTTCAAG 58.591 33.333 10.35 0.00 36.48 3.02
3158 5005 1.239296 GGGAACTACGGTGGGCAAAC 61.239 60.000 0.00 0.00 0.00 2.93
3166 5013 1.304381 TACGGCAGGGAACTACGGT 60.304 57.895 0.00 0.00 42.30 4.83
3209 5068 0.893270 TGCCACCAGAACCATTTCCG 60.893 55.000 0.00 0.00 31.28 4.30
3277 5137 2.678471 AACATGCCAAATTAGCAGGC 57.322 45.000 13.20 8.96 45.51 4.85
3421 5287 6.337356 CAAGTAGCAAGTTCCCTTTCAAAAA 58.663 36.000 0.00 0.00 0.00 1.94
3454 5320 6.841229 ACTGACTTAATAGATGAGGGATCACA 59.159 38.462 0.00 0.00 32.86 3.58
3516 5385 6.588348 AAACTGCAAAGACAAACATAAAGC 57.412 33.333 0.00 0.00 0.00 3.51
3556 5425 4.906618 ACTCCTGGAAATAATCAACACGT 58.093 39.130 0.00 0.00 0.00 4.49
3557 5426 5.872617 TGTACTCCTGGAAATAATCAACACG 59.127 40.000 0.00 0.00 0.00 4.49
3560 5429 7.110155 TCCTTGTACTCCTGGAAATAATCAAC 58.890 38.462 0.00 0.00 0.00 3.18
3612 5481 2.653890 CATGACTTTTTGTGCACTCCG 58.346 47.619 19.41 4.65 0.00 4.63
3671 5540 3.243704 TGGGAGAAATGAAAGGCAAAACG 60.244 43.478 0.00 0.00 0.00 3.60
3699 5568 2.360553 ACTTGACTCATGCTGACTCG 57.639 50.000 0.00 0.00 0.00 4.18
3707 5576 4.794762 CACAAACACACAACTTGACTCATG 59.205 41.667 0.00 0.00 0.00 3.07
3710 5579 4.678509 TCACAAACACACAACTTGACTC 57.321 40.909 0.00 0.00 0.00 3.36
3713 5582 4.277174 ACACTTCACAAACACACAACTTGA 59.723 37.500 0.00 0.00 0.00 3.02
3722 5591 3.438781 TCCTTGACACACTTCACAAACAC 59.561 43.478 0.00 0.00 0.00 3.32
3724 5593 4.900635 ATCCTTGACACACTTCACAAAC 57.099 40.909 0.00 0.00 0.00 2.93
3745 5614 3.436325 CCAGGATGTGGTTTGGGCATATA 60.436 47.826 0.00 0.00 42.17 0.86
3795 5664 6.947733 TGAATTCAGTTTCAGATTGTATGGGT 59.052 34.615 3.38 0.00 32.07 4.51
3796 5665 7.395190 TGAATTCAGTTTCAGATTGTATGGG 57.605 36.000 3.38 0.00 32.07 4.00
4048 5995 4.748102 TCAGACGTCAATTACTTTGTGGAC 59.252 41.667 19.50 0.00 36.65 4.02
4084 6031 1.004745 CCACCATACCAAGCAGGAAGT 59.995 52.381 1.83 0.00 41.22 3.01
4096 6043 5.620206 TCATGATCAACCATACCACCATAC 58.380 41.667 0.00 0.00 0.00 2.39
4100 6047 7.170965 AGAATATCATGATCAACCATACCACC 58.829 38.462 12.53 0.00 0.00 4.61
4149 6112 4.226427 AGTTGCATCTTAGCCATGAAGA 57.774 40.909 0.00 0.00 37.34 2.87
4309 6272 2.036089 ACAACGGAGAAGTTCAGAGACC 59.964 50.000 5.50 0.09 30.96 3.85
4383 6346 2.097466 CCCATATGACGGACAAGCAAAC 59.903 50.000 3.65 0.00 0.00 2.93
4389 6352 2.705730 CAACACCCATATGACGGACAA 58.294 47.619 3.65 0.00 0.00 3.18
4390 6353 1.677518 GCAACACCCATATGACGGACA 60.678 52.381 3.65 0.00 0.00 4.02
4418 6381 3.772025 CCATCAGAACAAGTCTAGACCCT 59.228 47.826 19.38 4.21 33.56 4.34
4419 6382 3.769844 TCCATCAGAACAAGTCTAGACCC 59.230 47.826 19.38 4.27 33.56 4.46
4422 6385 6.665248 TGAGAATCCATCAGAACAAGTCTAGA 59.335 38.462 0.00 0.00 33.56 2.43
4424 6387 6.211384 TGTGAGAATCCATCAGAACAAGTCTA 59.789 38.462 0.00 0.00 33.56 2.59
4443 6406 5.357878 ACATGAGAAAAAGTTGCTTGTGAGA 59.642 36.000 0.00 0.00 0.00 3.27
4453 6416 8.565896 TGTATATCTGCACATGAGAAAAAGTT 57.434 30.769 0.00 0.00 0.00 2.66
4706 6673 0.459489 GCTCCAAGGCACAAACACAA 59.541 50.000 0.00 0.00 0.00 3.33
4710 6677 1.604604 TGTAGCTCCAAGGCACAAAC 58.395 50.000 0.00 0.00 34.17 2.93
4711 6678 1.953686 GTTGTAGCTCCAAGGCACAAA 59.046 47.619 0.00 0.00 36.16 2.83
4773 6766 6.729690 CCCCCATTGTTATACATTGAACAT 57.270 37.500 0.00 0.00 35.57 2.71
4793 6786 0.546122 TGCACACAGTCATATCCCCC 59.454 55.000 0.00 0.00 0.00 5.40
4821 6814 0.681733 GATTATCCTCGGCCTCTGCA 59.318 55.000 0.00 0.00 40.13 4.41
4823 6816 1.638529 AGGATTATCCTCGGCCTCTG 58.361 55.000 8.15 0.00 45.66 3.35
4902 6900 2.904866 GAAGCACGCCCACCAACA 60.905 61.111 0.00 0.00 0.00 3.33
4977 6979 7.011669 GTCTTATCTACGGAGGCAGATAGATAC 59.988 44.444 0.00 0.00 36.71 2.24
5019 7021 8.905660 TTAATAAATGGGATGCAAATGGATTG 57.094 30.769 0.00 0.00 42.21 2.67
5083 7087 3.370846 CCTCATAATGACTGCAGGGTGAA 60.371 47.826 19.93 0.30 0.00 3.18
5090 7094 4.284829 TGTTGTCCTCATAATGACTGCA 57.715 40.909 0.00 0.00 32.67 4.41
5093 7097 8.321353 TGATAACTTGTTGTCCTCATAATGACT 58.679 33.333 7.57 0.00 32.67 3.41
5094 7098 8.492673 TGATAACTTGTTGTCCTCATAATGAC 57.507 34.615 7.57 0.00 0.00 3.06
5130 7134 7.496346 ACTTAGATGAATCTACCTCACCAAA 57.504 36.000 0.00 0.00 39.00 3.28
5155 7159 7.619512 TGACTGTATCTGTAGGAGAGAGATA 57.380 40.000 0.00 0.00 38.97 1.98
5156 7160 6.508030 TGACTGTATCTGTAGGAGAGAGAT 57.492 41.667 0.00 0.00 41.05 2.75
5158 7162 5.408299 CGATGACTGTATCTGTAGGAGAGAG 59.592 48.000 0.00 0.00 32.80 3.20
5165 7169 9.737427 AAATACTTTCGATGACTGTATCTGTAG 57.263 33.333 0.00 0.00 0.00 2.74
5170 7174 7.491372 TGGTGAAATACTTTCGATGACTGTATC 59.509 37.037 0.00 0.00 42.55 2.24
5171 7175 7.327975 TGGTGAAATACTTTCGATGACTGTAT 58.672 34.615 0.00 0.00 42.55 2.29
5172 7176 6.693466 TGGTGAAATACTTTCGATGACTGTA 58.307 36.000 0.00 0.00 42.55 2.74
5175 7179 8.786826 TTATTGGTGAAATACTTTCGATGACT 57.213 30.769 0.00 0.00 42.55 3.41
5176 7180 8.665685 ACTTATTGGTGAAATACTTTCGATGAC 58.334 33.333 0.00 0.00 42.55 3.06
5177 7181 8.786826 ACTTATTGGTGAAATACTTTCGATGA 57.213 30.769 0.00 0.00 42.55 2.92
5195 7199 9.209175 GAGTGCCCATTTACTAGATACTTATTG 57.791 37.037 0.00 0.00 0.00 1.90
5215 7219 2.566913 TGTCGAGATCTCTAGAGTGCC 58.433 52.381 20.26 9.61 0.00 5.01
5256 7291 8.934697 AGGTATATGTGTATGGTTGTGTCTATT 58.065 33.333 0.00 0.00 0.00 1.73
5258 7293 7.907841 AGGTATATGTGTATGGTTGTGTCTA 57.092 36.000 0.00 0.00 0.00 2.59
5260 7295 7.948357 TCTAGGTATATGTGTATGGTTGTGTC 58.052 38.462 0.00 0.00 0.00 3.67
5261 7296 7.907841 TCTAGGTATATGTGTATGGTTGTGT 57.092 36.000 0.00 0.00 0.00 3.72
5369 7404 3.857157 AGGCACTACACCTCAAAGAAA 57.143 42.857 0.00 0.00 36.02 2.52
5371 7406 4.967084 TTAAGGCACTACACCTCAAAGA 57.033 40.909 0.00 0.00 38.49 2.52
5372 7407 6.575162 ATTTTAAGGCACTACACCTCAAAG 57.425 37.500 0.00 0.00 38.49 2.77
5375 7410 8.466617 TTTTTATTTTAAGGCACTACACCTCA 57.533 30.769 0.00 0.00 38.49 3.86
5402 7437 2.806608 ATGCAAAGTGAAGGCAGTTG 57.193 45.000 0.00 0.00 41.40 3.16
5405 7440 8.483307 AATATTTTAATGCAAAGTGAAGGCAG 57.517 30.769 0.00 0.00 41.40 4.85
5473 7509 9.664332 TGGCAAAATTAACTGCATAATAATGTT 57.336 25.926 8.76 0.00 40.46 2.71
5485 7521 9.638239 ATGTATTACACTTGGCAAAATTAACTG 57.362 29.630 0.00 0.00 0.00 3.16
5605 7641 8.638873 CCAACCCAAGAACTTTACTCTTTAAAT 58.361 33.333 0.00 0.00 30.58 1.40
5617 7653 5.205056 TCACATTAACCAACCCAAGAACTT 58.795 37.500 0.00 0.00 0.00 2.66
5619 7655 5.722021 ATCACATTAACCAACCCAAGAAC 57.278 39.130 0.00 0.00 0.00 3.01
5624 7660 7.945664 GGGTAATATATCACATTAACCAACCCA 59.054 37.037 6.08 0.00 42.81 4.51
5625 7661 8.344446 GGGTAATATATCACATTAACCAACCC 57.656 38.462 6.08 0.00 42.81 4.11


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.