Multiple sequence alignment - TraesCS5B01G305800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G305800 chr5B 100.000 3758 0 0 1 3758 489810320 489806563 0.000000e+00 6940
1 TraesCS5B01G305800 chr5D 93.586 1793 71 16 1283 3070 408317267 408315514 0.000000e+00 2634
2 TraesCS5B01G305800 chr5D 95.096 1244 50 4 1 1239 408318942 408317705 0.000000e+00 1949
3 TraesCS5B01G305800 chr5D 90.000 120 12 0 2420 2539 408316186 408316067 5.030000e-34 156
4 TraesCS5B01G305800 chr5A 90.831 1625 122 18 1260 2863 514152554 514150936 0.000000e+00 2150
5 TraesCS5B01G305800 chr5A 95.050 808 30 5 430 1231 514153547 514152744 0.000000e+00 1262
6 TraesCS5B01G305800 chr5A 90.127 395 30 2 1 395 514153928 514153543 4.330000e-139 505
7 TraesCS5B01G305800 chr5A 94.860 214 10 1 2858 3070 514150858 514150645 2.160000e-87 333
8 TraesCS5B01G305800 chr5A 92.373 118 9 0 2360 2477 514151378 514151261 6.460000e-38 169
9 TraesCS5B01G305800 chr3D 84.106 151 22 1 3272 3422 439425469 439425321 1.090000e-30 145
10 TraesCS5B01G305800 chr7A 83.444 151 20 5 3272 3421 675405147 675405001 6.550000e-28 135
11 TraesCS5B01G305800 chr7B 82.609 138 24 0 3287 3424 9695209 9695346 5.100000e-24 122
12 TraesCS5B01G305800 chr1B 91.250 80 6 1 908 987 427066773 427066695 1.430000e-19 108


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G305800 chr5B 489806563 489810320 3757 True 6940.000000 6940 100.0000 1 3758 1 chr5B.!!$R1 3757
1 TraesCS5B01G305800 chr5D 408315514 408318942 3428 True 1579.666667 2634 92.8940 1 3070 3 chr5D.!!$R1 3069
2 TraesCS5B01G305800 chr5A 514150645 514153928 3283 True 883.800000 2150 92.6482 1 3070 5 chr5A.!!$R1 3069

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
965 971 0.891904 TCGGCACCTTTAGTTTGGCC 60.892 55.0 0.0 0.0 38.04 5.36 F
1655 2068 0.179000 AGCTGCCTATCCTTCAACCG 59.821 55.0 0.0 0.0 0.00 4.44 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2596 3029 0.035458 CTGTTCCTTCCTCTTGCCGT 59.965 55.0 0.0 0.0 0.00 5.68 R
3191 3745 0.034186 TATGGAGTTGCTGGCCCAAG 60.034 55.0 0.0 0.0 31.77 3.61 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
30 31 1.349067 ACACAGGTTCAGGAGGGTAC 58.651 55.000 0.00 0.00 0.00 3.34
133 134 3.656457 TGCAATCAGGCAGTCACAT 57.344 47.368 0.00 0.00 39.25 3.21
172 173 2.558359 GGTGCAAACTTAGTCAATGGCT 59.442 45.455 0.00 0.00 0.00 4.75
203 204 6.569179 AAACCATATACAATAATGGCGACC 57.431 37.500 1.29 0.00 45.53 4.79
268 269 6.466812 TGAATCAACAATCTGTCTAGAAGCA 58.533 36.000 0.00 0.00 36.32 3.91
348 349 3.487120 AACACTAATAATCCGGGAGCC 57.513 47.619 0.00 0.00 0.00 4.70
350 351 2.979678 ACACTAATAATCCGGGAGCCAT 59.020 45.455 0.00 0.00 0.00 4.40
351 352 3.244561 ACACTAATAATCCGGGAGCCATG 60.245 47.826 0.00 0.00 0.00 3.66
366 367 1.300971 CCATGACGCTCAACTGTGGG 61.301 60.000 0.00 0.00 0.00 4.61
378 379 1.699730 ACTGTGGGGTTAAAACTGGC 58.300 50.000 0.00 0.00 0.00 4.85
380 381 2.316108 CTGTGGGGTTAAAACTGGCTT 58.684 47.619 0.00 0.00 0.00 4.35
414 415 5.665812 TGTATAACCATGCTAACCTCCTCTT 59.334 40.000 0.00 0.00 0.00 2.85
486 487 4.280929 AGACACTGTACTGCAATGTGAGTA 59.719 41.667 0.00 0.00 37.71 2.59
489 490 3.987868 ACTGTACTGCAATGTGAGTAACG 59.012 43.478 0.00 0.00 0.00 3.18
563 564 9.688091 TGTATCTACTCTGTTCTTTGTATCTCT 57.312 33.333 0.00 0.00 0.00 3.10
746 747 3.335579 CCCAAGGAGAAAGAAACGGTAG 58.664 50.000 0.00 0.00 0.00 3.18
767 773 7.095355 CGGTAGTGCCCAATGTAATAATACTTC 60.095 40.741 0.00 0.00 32.98 3.01
773 779 7.015098 TGCCCAATGTAATAATACTTCCCATTG 59.985 37.037 0.00 0.00 32.98 2.82
836 842 4.819761 TGCAGATCGCGTGGAGCC 62.820 66.667 5.77 0.00 46.97 4.70
894 900 5.596772 TGGCCTTTTATTATTCAGGTAAGCC 59.403 40.000 3.32 0.00 0.00 4.35
940 946 2.116238 TGTATGTTACCTGCTCTCCCC 58.884 52.381 0.00 0.00 0.00 4.81
965 971 0.891904 TCGGCACCTTTAGTTTGGCC 60.892 55.000 0.00 0.00 38.04 5.36
1017 1023 6.303903 TGAAGAATGGATCACATGAAGAGA 57.696 37.500 0.00 0.00 40.44 3.10
1031 1037 1.139853 GAAGAGATTCTCCGGCATGGT 59.860 52.381 10.09 0.00 39.52 3.55
1239 1246 2.238942 TGTCGCCGAGATGCAATTAT 57.761 45.000 0.00 0.00 0.00 1.28
1240 1247 2.135139 TGTCGCCGAGATGCAATTATC 58.865 47.619 0.00 0.00 0.00 1.75
1241 1248 1.461127 GTCGCCGAGATGCAATTATCC 59.539 52.381 0.00 0.00 0.00 2.59
1242 1249 0.798776 CGCCGAGATGCAATTATCCC 59.201 55.000 0.00 0.00 0.00 3.85
1243 1250 1.168714 GCCGAGATGCAATTATCCCC 58.831 55.000 0.00 0.00 0.00 4.81
1244 1251 1.826385 CCGAGATGCAATTATCCCCC 58.174 55.000 0.00 0.00 0.00 5.40
1374 1785 6.042777 TGGATAATCTGACTAGAACGCTTTG 58.957 40.000 0.00 0.00 36.32 2.77
1375 1786 5.463724 GGATAATCTGACTAGAACGCTTTGG 59.536 44.000 0.00 0.00 36.32 3.28
1412 1823 1.285641 CCGCCGCATGTTCAAACTT 59.714 52.632 0.00 0.00 0.00 2.66
1493 1904 3.587797 AGATGGAATTTGCTTGCAGTG 57.412 42.857 0.00 0.00 38.70 3.66
1572 1985 2.185608 GGCTCAAGACTCCTCCGC 59.814 66.667 0.00 0.00 0.00 5.54
1655 2068 0.179000 AGCTGCCTATCCTTCAACCG 59.821 55.000 0.00 0.00 0.00 4.44
1729 2142 6.588204 ACACTTTTCACTGTACATACCTTCA 58.412 36.000 0.00 0.00 0.00 3.02
1752 2165 1.273759 AGAAGACATGCTGCTCTCCA 58.726 50.000 0.00 0.00 0.00 3.86
1817 2237 4.647611 ACCATTCACCAAGTCGAAATACA 58.352 39.130 0.00 0.00 0.00 2.29
1845 2265 9.994432 CATCAGGATTGTAGAACATTTAAAGAC 57.006 33.333 0.00 0.00 0.00 3.01
1962 2392 8.669946 TGTTGATCTTACTGTTTGACATTGTA 57.330 30.769 0.00 0.00 0.00 2.41
2034 2464 3.119602 CGAAGTCCGAATCTCCTACAACA 60.120 47.826 0.00 0.00 41.76 3.33
2075 2505 1.111116 ACTCCAACGACGAGACCCAA 61.111 55.000 0.00 0.00 0.00 4.12
2088 2518 1.614413 AGACCCAACTCTTCGTCAGAC 59.386 52.381 0.00 0.00 0.00 3.51
2093 2523 3.248602 CCCAACTCTTCGTCAGACAAAAG 59.751 47.826 0.41 4.03 0.00 2.27
2099 2529 1.865865 TCGTCAGACAAAAGCCTCAC 58.134 50.000 0.41 0.00 0.00 3.51
2101 2531 0.868406 GTCAGACAAAAGCCTCACCG 59.132 55.000 0.00 0.00 0.00 4.94
2214 2647 2.510238 GCAGTGGCAGCTCCTACG 60.510 66.667 0.00 0.00 40.72 3.51
2215 2648 2.185350 CAGTGGCAGCTCCTACGG 59.815 66.667 0.00 0.00 35.26 4.02
2257 2690 2.821991 AACCTCGTCAGACAAGAAGG 57.178 50.000 0.41 4.29 0.00 3.46
2259 2692 0.605589 CCTCGTCAGACAAGAAGGCT 59.394 55.000 0.41 0.00 33.98 4.58
2295 2728 2.041701 ACAAAGGCAGCCAAGAACATT 58.958 42.857 15.80 0.00 0.00 2.71
2378 2811 0.608035 TCGGTTGGTGCAAAGGATCC 60.608 55.000 2.48 2.48 0.00 3.36
2460 2893 1.451927 GGTCGATGCTGGCAATGGA 60.452 57.895 0.00 0.00 0.00 3.41
2477 2910 1.743252 GAGGCGCCACAAGAAGAGG 60.743 63.158 31.54 0.00 0.00 3.69
2478 2911 2.172483 GAGGCGCCACAAGAAGAGGA 62.172 60.000 31.54 0.00 0.00 3.71
2501 2934 1.620822 GTTGGTGCAAAGGACCTGAT 58.379 50.000 9.12 0.00 34.26 2.90
2596 3029 2.032528 CCTCTTCAGTGCCGGCAA 59.967 61.111 34.66 14.28 0.00 4.52
2612 3045 0.889186 GCAACGGCAAGAGGAAGGAA 60.889 55.000 0.00 0.00 40.72 3.36
2625 3058 0.606673 GAAGGAACAGAGGTGGCCAC 60.607 60.000 28.57 28.57 0.00 5.01
2748 3181 2.308570 TGGAAGCCATGGAAAGAAGCTA 59.691 45.455 18.40 0.00 32.39 3.32
2751 3184 3.274095 AGCCATGGAAAGAAGCTAGTC 57.726 47.619 18.40 0.00 30.46 2.59
2810 3268 4.019174 TGAATTTTCAGGAAGGAGATGGC 58.981 43.478 0.00 0.00 32.50 4.40
2811 3269 3.744940 ATTTTCAGGAAGGAGATGGCA 57.255 42.857 0.00 0.00 0.00 4.92
2812 3270 3.524095 TTTTCAGGAAGGAGATGGCAA 57.476 42.857 0.00 0.00 0.00 4.52
2813 3271 2.496899 TTCAGGAAGGAGATGGCAAC 57.503 50.000 0.00 0.00 0.00 4.17
2837 3295 6.094881 ACATTCGGTTCAGAAAAGAACTTTCA 59.905 34.615 6.77 0.00 45.15 2.69
2892 3433 8.712285 ATTGGAAGATTGTTCATATTTTGCAG 57.288 30.769 0.00 0.00 0.00 4.41
2980 3521 1.221414 AGTCGCTCAAGCAGTGAAAC 58.779 50.000 2.50 0.00 43.49 2.78
2986 3527 1.670811 CTCAAGCAGTGAAACCGTTGT 59.329 47.619 0.00 0.00 37.80 3.32
2988 3529 2.159448 TCAAGCAGTGAAACCGTTGTTG 60.159 45.455 0.00 0.00 37.80 3.33
3058 3612 9.206870 TCATTTCTATGAAATTTCAAGTTTGCC 57.793 29.630 23.91 0.00 41.13 4.52
3070 3624 1.375551 AGTTTGCCGAAACAACTCGT 58.624 45.000 2.87 0.00 43.51 4.18
3071 3625 1.329599 AGTTTGCCGAAACAACTCGTC 59.670 47.619 2.87 0.00 43.51 4.20
3072 3626 1.062880 GTTTGCCGAAACAACTCGTCA 59.937 47.619 0.00 0.00 41.12 4.35
3073 3627 0.653636 TTGCCGAAACAACTCGTCAC 59.346 50.000 0.00 0.00 37.11 3.67
3074 3628 1.200839 GCCGAAACAACTCGTCACG 59.799 57.895 0.00 0.00 37.11 4.35
3075 3629 1.200839 CCGAAACAACTCGTCACGC 59.799 57.895 0.00 0.00 37.11 5.34
3076 3630 1.484227 CCGAAACAACTCGTCACGCA 61.484 55.000 0.00 0.00 37.11 5.24
3077 3631 0.506932 CGAAACAACTCGTCACGCAT 59.493 50.000 0.00 0.00 34.08 4.73
3078 3632 1.717113 CGAAACAACTCGTCACGCATA 59.283 47.619 0.00 0.00 34.08 3.14
3079 3633 2.470140 CGAAACAACTCGTCACGCATAC 60.470 50.000 0.00 0.00 34.08 2.39
3080 3634 2.143008 AACAACTCGTCACGCATACA 57.857 45.000 0.00 0.00 0.00 2.29
3081 3635 2.143008 ACAACTCGTCACGCATACAA 57.857 45.000 0.00 0.00 0.00 2.41
3082 3636 2.058798 ACAACTCGTCACGCATACAAG 58.941 47.619 0.00 0.00 0.00 3.16
3083 3637 2.058798 CAACTCGTCACGCATACAAGT 58.941 47.619 0.00 0.00 0.00 3.16
3084 3638 3.239254 CAACTCGTCACGCATACAAGTA 58.761 45.455 0.00 0.00 0.00 2.24
3085 3639 2.860062 ACTCGTCACGCATACAAGTAC 58.140 47.619 0.00 0.00 0.00 2.73
3086 3640 2.227149 ACTCGTCACGCATACAAGTACA 59.773 45.455 0.00 0.00 0.00 2.90
3087 3641 3.239254 CTCGTCACGCATACAAGTACAA 58.761 45.455 0.00 0.00 0.00 2.41
3088 3642 3.640592 TCGTCACGCATACAAGTACAAA 58.359 40.909 0.00 0.00 0.00 2.83
3089 3643 4.049869 TCGTCACGCATACAAGTACAAAA 58.950 39.130 0.00 0.00 0.00 2.44
3090 3644 4.084952 TCGTCACGCATACAAGTACAAAAC 60.085 41.667 0.00 0.00 0.00 2.43
3091 3645 4.460505 GTCACGCATACAAGTACAAAACC 58.539 43.478 0.00 0.00 0.00 3.27
3092 3646 3.499157 TCACGCATACAAGTACAAAACCC 59.501 43.478 0.00 0.00 0.00 4.11
3093 3647 3.251245 CACGCATACAAGTACAAAACCCA 59.749 43.478 0.00 0.00 0.00 4.51
3094 3648 3.251487 ACGCATACAAGTACAAAACCCAC 59.749 43.478 0.00 0.00 0.00 4.61
3095 3649 3.251245 CGCATACAAGTACAAAACCCACA 59.749 43.478 0.00 0.00 0.00 4.17
3096 3650 4.612712 CGCATACAAGTACAAAACCCACAG 60.613 45.833 0.00 0.00 0.00 3.66
3097 3651 4.517453 GCATACAAGTACAAAACCCACAGA 59.483 41.667 0.00 0.00 0.00 3.41
3098 3652 5.334879 GCATACAAGTACAAAACCCACAGAG 60.335 44.000 0.00 0.00 0.00 3.35
3099 3653 2.949644 ACAAGTACAAAACCCACAGAGC 59.050 45.455 0.00 0.00 0.00 4.09
3100 3654 3.214328 CAAGTACAAAACCCACAGAGCT 58.786 45.455 0.00 0.00 0.00 4.09
3101 3655 4.141574 ACAAGTACAAAACCCACAGAGCTA 60.142 41.667 0.00 0.00 0.00 3.32
3102 3656 4.004196 AGTACAAAACCCACAGAGCTAC 57.996 45.455 0.00 0.00 0.00 3.58
3103 3657 2.271944 ACAAAACCCACAGAGCTACC 57.728 50.000 0.00 0.00 0.00 3.18
3104 3658 1.493022 ACAAAACCCACAGAGCTACCA 59.507 47.619 0.00 0.00 0.00 3.25
3105 3659 2.108250 ACAAAACCCACAGAGCTACCAT 59.892 45.455 0.00 0.00 0.00 3.55
3106 3660 3.329520 ACAAAACCCACAGAGCTACCATA 59.670 43.478 0.00 0.00 0.00 2.74
3107 3661 3.914426 AAACCCACAGAGCTACCATAG 57.086 47.619 0.00 0.00 0.00 2.23
3115 3669 4.675404 GCTACCATAGCCGCGATT 57.325 55.556 8.23 0.00 45.95 3.34
3116 3670 3.806591 GCTACCATAGCCGCGATTA 57.193 52.632 8.23 0.00 45.95 1.75
3117 3671 1.630148 GCTACCATAGCCGCGATTAG 58.370 55.000 8.23 0.00 45.95 1.73
3118 3672 1.630148 CTACCATAGCCGCGATTAGC 58.370 55.000 8.23 1.15 43.95 3.09
3119 3673 0.245539 TACCATAGCCGCGATTAGCC 59.754 55.000 8.23 0.00 44.76 3.93
3120 3674 1.293498 CCATAGCCGCGATTAGCCT 59.707 57.895 8.23 0.00 44.76 4.58
3121 3675 0.530744 CCATAGCCGCGATTAGCCTA 59.469 55.000 8.23 0.00 44.76 3.93
3122 3676 1.137086 CCATAGCCGCGATTAGCCTAT 59.863 52.381 8.23 0.76 44.76 2.57
3123 3677 2.418746 CCATAGCCGCGATTAGCCTATT 60.419 50.000 8.23 0.00 44.76 1.73
3124 3678 3.181479 CCATAGCCGCGATTAGCCTATTA 60.181 47.826 8.23 0.00 44.76 0.98
3125 3679 4.430007 CATAGCCGCGATTAGCCTATTAA 58.570 43.478 8.23 0.00 44.76 1.40
3126 3680 3.611766 AGCCGCGATTAGCCTATTAAT 57.388 42.857 8.23 0.00 44.76 1.40
3127 3681 3.262420 AGCCGCGATTAGCCTATTAATG 58.738 45.455 8.23 0.00 44.76 1.90
3128 3682 3.000727 GCCGCGATTAGCCTATTAATGT 58.999 45.455 8.23 0.00 44.76 2.71
3129 3683 3.435671 GCCGCGATTAGCCTATTAATGTT 59.564 43.478 8.23 0.00 44.76 2.71
3130 3684 4.435651 GCCGCGATTAGCCTATTAATGTTC 60.436 45.833 8.23 0.00 44.76 3.18
3131 3685 4.688879 CCGCGATTAGCCTATTAATGTTCA 59.311 41.667 8.23 0.00 44.76 3.18
3132 3686 5.163953 CCGCGATTAGCCTATTAATGTTCAG 60.164 44.000 8.23 0.00 44.76 3.02
3133 3687 5.622378 GCGATTAGCCTATTAATGTTCAGC 58.378 41.667 0.00 0.00 40.81 4.26
3134 3688 5.179368 GCGATTAGCCTATTAATGTTCAGCA 59.821 40.000 0.00 0.00 40.81 4.41
3135 3689 6.593978 CGATTAGCCTATTAATGTTCAGCAC 58.406 40.000 0.00 0.00 0.00 4.40
3136 3690 6.347725 CGATTAGCCTATTAATGTTCAGCACC 60.348 42.308 0.00 0.00 0.00 5.01
3137 3691 4.235079 AGCCTATTAATGTTCAGCACCA 57.765 40.909 0.00 0.00 0.00 4.17
3138 3692 4.202441 AGCCTATTAATGTTCAGCACCAG 58.798 43.478 0.00 0.00 0.00 4.00
3139 3693 3.947834 GCCTATTAATGTTCAGCACCAGT 59.052 43.478 0.00 0.00 0.00 4.00
3140 3694 4.035675 GCCTATTAATGTTCAGCACCAGTC 59.964 45.833 0.00 0.00 0.00 3.51
3141 3695 5.431765 CCTATTAATGTTCAGCACCAGTCT 58.568 41.667 0.00 0.00 0.00 3.24
3142 3696 6.582636 CCTATTAATGTTCAGCACCAGTCTA 58.417 40.000 0.00 0.00 0.00 2.59
3143 3697 6.480320 CCTATTAATGTTCAGCACCAGTCTAC 59.520 42.308 0.00 0.00 0.00 2.59
3144 3698 3.769739 AATGTTCAGCACCAGTCTACA 57.230 42.857 0.00 0.00 0.00 2.74
3145 3699 2.526304 TGTTCAGCACCAGTCTACAC 57.474 50.000 0.00 0.00 0.00 2.90
3146 3700 2.039418 TGTTCAGCACCAGTCTACACT 58.961 47.619 0.00 0.00 0.00 3.55
3147 3701 3.227614 TGTTCAGCACCAGTCTACACTA 58.772 45.455 0.00 0.00 0.00 2.74
3148 3702 3.255888 TGTTCAGCACCAGTCTACACTAG 59.744 47.826 0.00 0.00 0.00 2.57
3149 3703 2.447443 TCAGCACCAGTCTACACTAGG 58.553 52.381 0.00 0.00 0.00 3.02
3150 3704 2.041216 TCAGCACCAGTCTACACTAGGA 59.959 50.000 0.00 0.00 0.00 2.94
3151 3705 2.425312 CAGCACCAGTCTACACTAGGAG 59.575 54.545 0.00 0.00 0.00 3.69
3152 3706 2.041891 AGCACCAGTCTACACTAGGAGT 59.958 50.000 0.00 0.00 0.00 3.85
3161 3715 1.078848 CACTAGGAGTGCACCTGGC 60.079 63.158 14.63 0.26 39.62 4.85
3170 3724 2.280797 GCACCTGGCACACGAGAA 60.281 61.111 0.00 0.00 43.97 2.87
3171 3725 1.891919 GCACCTGGCACACGAGAAA 60.892 57.895 0.00 0.00 43.97 2.52
3172 3726 1.444119 GCACCTGGCACACGAGAAAA 61.444 55.000 0.00 0.00 43.97 2.29
3173 3727 1.021202 CACCTGGCACACGAGAAAAA 58.979 50.000 0.00 0.00 0.00 1.94
3194 3748 4.871933 AAAAATGCCCCTCTACAACTTG 57.128 40.909 0.00 0.00 0.00 3.16
3195 3749 2.514458 AATGCCCCTCTACAACTTGG 57.486 50.000 0.00 0.00 0.00 3.61
3196 3750 0.625849 ATGCCCCTCTACAACTTGGG 59.374 55.000 0.00 0.00 39.37 4.12
3198 3752 1.303282 CCCCTCTACAACTTGGGCC 59.697 63.158 0.00 0.00 38.37 5.80
3199 3753 1.497309 CCCCTCTACAACTTGGGCCA 61.497 60.000 0.00 0.00 38.37 5.36
3200 3754 0.035056 CCCTCTACAACTTGGGCCAG 60.035 60.000 6.23 3.69 32.49 4.85
3201 3755 0.678048 CCTCTACAACTTGGGCCAGC 60.678 60.000 6.23 0.00 0.00 4.85
3202 3756 0.036732 CTCTACAACTTGGGCCAGCA 59.963 55.000 6.23 0.00 0.00 4.41
3203 3757 0.476338 TCTACAACTTGGGCCAGCAA 59.524 50.000 6.23 0.00 0.00 3.91
3204 3758 0.598065 CTACAACTTGGGCCAGCAAC 59.402 55.000 6.23 0.00 0.00 4.17
3205 3759 0.184933 TACAACTTGGGCCAGCAACT 59.815 50.000 6.23 0.00 0.00 3.16
3206 3760 1.109323 ACAACTTGGGCCAGCAACTC 61.109 55.000 6.23 0.00 0.00 3.01
3207 3761 1.531602 AACTTGGGCCAGCAACTCC 60.532 57.895 6.23 0.00 0.00 3.85
3208 3762 2.115910 CTTGGGCCAGCAACTCCA 59.884 61.111 6.23 0.00 0.00 3.86
3209 3763 1.304713 CTTGGGCCAGCAACTCCAT 60.305 57.895 6.23 0.00 0.00 3.41
3210 3764 0.034186 CTTGGGCCAGCAACTCCATA 60.034 55.000 6.23 0.00 0.00 2.74
3211 3765 0.630673 TTGGGCCAGCAACTCCATAT 59.369 50.000 6.23 0.00 0.00 1.78
3212 3766 1.517238 TGGGCCAGCAACTCCATATA 58.483 50.000 0.00 0.00 0.00 0.86
3213 3767 1.421268 TGGGCCAGCAACTCCATATAG 59.579 52.381 0.00 0.00 0.00 1.31
3214 3768 1.528129 GGCCAGCAACTCCATATAGC 58.472 55.000 0.00 0.00 0.00 2.97
3215 3769 1.072965 GGCCAGCAACTCCATATAGCT 59.927 52.381 0.00 0.00 35.63 3.32
3218 3772 3.482156 CAGCAACTCCATATAGCTGGT 57.518 47.619 0.00 0.00 46.55 4.00
3219 3773 3.813443 CAGCAACTCCATATAGCTGGTT 58.187 45.455 0.00 0.00 46.55 3.67
3220 3774 4.202441 CAGCAACTCCATATAGCTGGTTT 58.798 43.478 0.00 0.00 46.55 3.27
3221 3775 4.036027 CAGCAACTCCATATAGCTGGTTTG 59.964 45.833 0.00 0.00 46.55 2.93
3222 3776 3.947834 GCAACTCCATATAGCTGGTTTGT 59.052 43.478 0.00 0.00 37.57 2.83
3223 3777 4.035675 GCAACTCCATATAGCTGGTTTGTC 59.964 45.833 0.00 0.00 37.57 3.18
3224 3778 4.423625 ACTCCATATAGCTGGTTTGTCC 57.576 45.455 0.00 0.00 37.57 4.02
3225 3779 3.780294 ACTCCATATAGCTGGTTTGTCCA 59.220 43.478 0.00 0.00 45.01 4.02
3226 3780 4.130118 CTCCATATAGCTGGTTTGTCCAC 58.870 47.826 0.00 0.00 41.93 4.02
3227 3781 3.118038 TCCATATAGCTGGTTTGTCCACC 60.118 47.826 0.00 0.00 41.93 4.61
3228 3782 3.117888 CCATATAGCTGGTTTGTCCACCT 60.118 47.826 0.00 0.00 41.93 4.00
3229 3783 4.102524 CCATATAGCTGGTTTGTCCACCTA 59.897 45.833 0.00 0.00 41.93 3.08
3230 3784 3.914426 ATAGCTGGTTTGTCCACCTAG 57.086 47.619 0.00 0.00 41.93 3.02
3231 3785 0.036875 AGCTGGTTTGTCCACCTAGC 59.963 55.000 0.00 0.00 41.93 3.42
3232 3786 0.250727 GCTGGTTTGTCCACCTAGCA 60.251 55.000 8.52 0.00 41.93 3.49
3233 3787 1.523758 CTGGTTTGTCCACCTAGCAC 58.476 55.000 0.00 0.00 41.93 4.40
3234 3788 0.109723 TGGTTTGTCCACCTAGCACC 59.890 55.000 0.00 0.00 41.93 5.01
3235 3789 0.953960 GGTTTGTCCACCTAGCACCG 60.954 60.000 0.00 0.00 33.50 4.94
3236 3790 0.250166 GTTTGTCCACCTAGCACCGT 60.250 55.000 0.00 0.00 0.00 4.83
3237 3791 1.001181 GTTTGTCCACCTAGCACCGTA 59.999 52.381 0.00 0.00 0.00 4.02
3238 3792 1.563924 TTGTCCACCTAGCACCGTAT 58.436 50.000 0.00 0.00 0.00 3.06
3239 3793 1.108776 TGTCCACCTAGCACCGTATC 58.891 55.000 0.00 0.00 0.00 2.24
3240 3794 0.388294 GTCCACCTAGCACCGTATCC 59.612 60.000 0.00 0.00 0.00 2.59
3241 3795 1.105167 TCCACCTAGCACCGTATCCG 61.105 60.000 0.00 0.00 0.00 4.18
3242 3796 1.389609 CCACCTAGCACCGTATCCGT 61.390 60.000 0.00 0.00 0.00 4.69
3243 3797 0.030369 CACCTAGCACCGTATCCGTC 59.970 60.000 0.00 0.00 0.00 4.79
3244 3798 0.106819 ACCTAGCACCGTATCCGTCT 60.107 55.000 0.00 0.00 0.00 4.18
3245 3799 0.311165 CCTAGCACCGTATCCGTCTG 59.689 60.000 0.00 0.00 0.00 3.51
3246 3800 0.317938 CTAGCACCGTATCCGTCTGC 60.318 60.000 0.00 0.00 36.56 4.26
3247 3801 1.033202 TAGCACCGTATCCGTCTGCA 61.033 55.000 1.38 0.00 37.96 4.41
3248 3802 1.878522 GCACCGTATCCGTCTGCAG 60.879 63.158 7.63 7.63 36.42 4.41
3249 3803 1.807226 CACCGTATCCGTCTGCAGA 59.193 57.895 13.74 13.74 0.00 4.26
3250 3804 0.525668 CACCGTATCCGTCTGCAGAC 60.526 60.000 32.73 32.73 41.47 3.51
3251 3805 1.065928 CCGTATCCGTCTGCAGACC 59.934 63.158 35.07 22.02 41.86 3.85
3252 3806 1.298413 CGTATCCGTCTGCAGACCG 60.298 63.158 35.07 29.45 41.86 4.79
3253 3807 1.065928 GTATCCGTCTGCAGACCGG 59.934 63.158 35.07 34.16 41.86 5.28
3254 3808 1.379443 TATCCGTCTGCAGACCGGT 60.379 57.895 35.32 29.70 41.86 5.28
3255 3809 1.663379 TATCCGTCTGCAGACCGGTG 61.663 60.000 35.32 25.38 41.86 4.94
3256 3810 4.742201 CCGTCTGCAGACCGGTGG 62.742 72.222 35.07 27.16 41.86 4.61
3257 3811 3.680786 CGTCTGCAGACCGGTGGA 61.681 66.667 35.07 0.00 41.86 4.02
3258 3812 2.262915 GTCTGCAGACCGGTGGAG 59.737 66.667 32.55 9.99 39.07 3.86
3259 3813 2.117423 TCTGCAGACCGGTGGAGA 59.883 61.111 14.63 12.70 42.09 3.71
3260 3814 2.262915 CTGCAGACCGGTGGAGAC 59.737 66.667 14.63 0.00 38.10 3.36
3261 3815 3.302347 CTGCAGACCGGTGGAGACC 62.302 68.421 14.63 0.00 38.10 3.85
3269 3823 4.675404 GGTGGAGACCGACTTGTG 57.325 61.111 0.00 0.00 30.61 3.33
3270 3824 2.046938 GGTGGAGACCGACTTGTGA 58.953 57.895 0.00 0.00 30.61 3.58
3271 3825 0.391597 GGTGGAGACCGACTTGTGAA 59.608 55.000 0.00 0.00 30.61 3.18
3272 3826 1.499049 GTGGAGACCGACTTGTGAAC 58.501 55.000 0.00 0.00 0.00 3.18
3273 3827 1.116308 TGGAGACCGACTTGTGAACA 58.884 50.000 0.00 0.00 0.00 3.18
3274 3828 1.691976 TGGAGACCGACTTGTGAACAT 59.308 47.619 0.00 0.00 0.00 2.71
3275 3829 2.104111 TGGAGACCGACTTGTGAACATT 59.896 45.455 0.00 0.00 0.00 2.71
3276 3830 2.480419 GGAGACCGACTTGTGAACATTG 59.520 50.000 0.00 0.00 0.00 2.82
3277 3831 3.390135 GAGACCGACTTGTGAACATTGA 58.610 45.455 0.00 0.00 0.00 2.57
3278 3832 3.997021 GAGACCGACTTGTGAACATTGAT 59.003 43.478 0.00 0.00 0.00 2.57
3279 3833 3.748048 AGACCGACTTGTGAACATTGATG 59.252 43.478 0.00 0.00 0.00 3.07
3280 3834 3.476552 ACCGACTTGTGAACATTGATGT 58.523 40.909 0.00 0.00 44.20 3.06
3281 3835 3.250762 ACCGACTTGTGAACATTGATGTG 59.749 43.478 0.00 0.00 41.61 3.21
3282 3836 3.498018 CCGACTTGTGAACATTGATGTGA 59.502 43.478 0.00 0.00 41.61 3.58
3283 3837 4.024133 CCGACTTGTGAACATTGATGTGAA 60.024 41.667 0.00 0.00 41.61 3.18
3284 3838 5.505489 CCGACTTGTGAACATTGATGTGAAA 60.505 40.000 0.00 0.00 41.61 2.69
3285 3839 5.622448 CGACTTGTGAACATTGATGTGAAAG 59.378 40.000 0.00 3.03 41.61 2.62
3286 3840 5.284079 ACTTGTGAACATTGATGTGAAAGC 58.716 37.500 0.00 0.00 41.61 3.51
3287 3841 4.241590 TGTGAACATTGATGTGAAAGCC 57.758 40.909 0.00 0.00 41.61 4.35
3288 3842 3.236816 GTGAACATTGATGTGAAAGCCG 58.763 45.455 0.00 0.00 41.61 5.52
3289 3843 2.228582 TGAACATTGATGTGAAAGCCGG 59.771 45.455 0.00 0.00 41.61 6.13
3290 3844 0.527565 ACATTGATGTGAAAGCCGGC 59.472 50.000 21.89 21.89 40.03 6.13
3291 3845 0.179129 CATTGATGTGAAAGCCGGCC 60.179 55.000 26.15 8.84 0.00 6.13
3292 3846 0.611618 ATTGATGTGAAAGCCGGCCA 60.612 50.000 26.15 14.55 0.00 5.36
3293 3847 0.611618 TTGATGTGAAAGCCGGCCAT 60.612 50.000 26.15 19.21 0.00 4.40
3294 3848 0.611618 TGATGTGAAAGCCGGCCATT 60.612 50.000 26.15 19.59 0.00 3.16
3295 3849 0.101219 GATGTGAAAGCCGGCCATTC 59.899 55.000 27.27 27.27 0.00 2.67
3296 3850 0.611618 ATGTGAAAGCCGGCCATTCA 60.612 50.000 30.82 30.82 0.00 2.57
3297 3851 0.825425 TGTGAAAGCCGGCCATTCAA 60.825 50.000 34.08 24.44 35.07 2.69
3298 3852 0.532115 GTGAAAGCCGGCCATTCAAT 59.468 50.000 34.08 11.24 35.07 2.57
3299 3853 0.817013 TGAAAGCCGGCCATTCAATC 59.183 50.000 31.80 17.72 30.60 2.67
3300 3854 0.248621 GAAAGCCGGCCATTCAATCG 60.249 55.000 28.39 0.00 0.00 3.34
3301 3855 1.666209 AAAGCCGGCCATTCAATCGG 61.666 55.000 26.15 0.00 44.70 4.18
3302 3856 2.515991 GCCGGCCATTCAATCGGA 60.516 61.111 18.11 0.00 44.69 4.55
3303 3857 2.834618 GCCGGCCATTCAATCGGAC 61.835 63.158 18.11 0.00 44.69 4.79
3304 3858 2.186826 CCGGCCATTCAATCGGACC 61.187 63.158 2.24 0.00 44.69 4.46
3305 3859 2.186826 CGGCCATTCAATCGGACCC 61.187 63.158 2.24 0.00 0.00 4.46
3306 3860 2.186826 GGCCATTCAATCGGACCCG 61.187 63.158 0.00 1.31 41.35 5.28
3307 3861 2.834618 GCCATTCAATCGGACCCGC 61.835 63.158 3.13 0.00 39.59 6.13
3308 3862 1.451207 CCATTCAATCGGACCCGCA 60.451 57.895 3.13 0.00 39.59 5.69
3309 3863 0.819259 CCATTCAATCGGACCCGCAT 60.819 55.000 3.13 0.00 39.59 4.73
3310 3864 1.542328 CCATTCAATCGGACCCGCATA 60.542 52.381 3.13 0.00 39.59 3.14
3311 3865 1.531149 CATTCAATCGGACCCGCATAC 59.469 52.381 3.13 0.00 39.59 2.39
3312 3866 0.537653 TTCAATCGGACCCGCATACA 59.462 50.000 3.13 0.00 39.59 2.29
3313 3867 0.756294 TCAATCGGACCCGCATACAT 59.244 50.000 3.13 0.00 39.59 2.29
3314 3868 1.140052 TCAATCGGACCCGCATACATT 59.860 47.619 3.13 0.00 39.59 2.71
3315 3869 1.946768 CAATCGGACCCGCATACATTT 59.053 47.619 3.13 0.00 39.59 2.32
3316 3870 1.878953 ATCGGACCCGCATACATTTC 58.121 50.000 3.13 0.00 39.59 2.17
3317 3871 0.537653 TCGGACCCGCATACATTTCA 59.462 50.000 3.13 0.00 39.59 2.69
3318 3872 1.066071 TCGGACCCGCATACATTTCAA 60.066 47.619 3.13 0.00 39.59 2.69
3319 3873 1.740585 CGGACCCGCATACATTTCAAA 59.259 47.619 0.00 0.00 0.00 2.69
3320 3874 2.162608 CGGACCCGCATACATTTCAAAA 59.837 45.455 0.00 0.00 0.00 2.44
3321 3875 3.507786 GGACCCGCATACATTTCAAAAC 58.492 45.455 0.00 0.00 0.00 2.43
3322 3876 3.057174 GGACCCGCATACATTTCAAAACA 60.057 43.478 0.00 0.00 0.00 2.83
3323 3877 4.551388 GACCCGCATACATTTCAAAACAA 58.449 39.130 0.00 0.00 0.00 2.83
3324 3878 4.950050 ACCCGCATACATTTCAAAACAAA 58.050 34.783 0.00 0.00 0.00 2.83
3325 3879 4.987912 ACCCGCATACATTTCAAAACAAAG 59.012 37.500 0.00 0.00 0.00 2.77
3326 3880 4.987912 CCCGCATACATTTCAAAACAAAGT 59.012 37.500 0.00 0.00 0.00 2.66
3327 3881 5.465056 CCCGCATACATTTCAAAACAAAGTT 59.535 36.000 0.00 0.00 0.00 2.66
3328 3882 6.354080 CCGCATACATTTCAAAACAAAGTTG 58.646 36.000 0.00 0.00 0.00 3.16
3329 3883 6.199908 CCGCATACATTTCAAAACAAAGTTGA 59.800 34.615 0.00 0.00 33.21 3.18
3330 3884 7.254252 CCGCATACATTTCAAAACAAAGTTGAA 60.254 33.333 0.00 0.00 41.91 2.69
3331 3885 8.274939 CGCATACATTTCAAAACAAAGTTGAAT 58.725 29.630 0.00 0.00 42.82 2.57
3341 3895 9.658799 TCAAAACAAAGTTGAATAAATTGGACA 57.341 25.926 0.00 0.00 32.13 4.02
3362 3916 9.658799 TGGACAAATTTTATCAAACAAAACAGA 57.341 25.926 0.00 0.00 0.00 3.41
3377 3931 8.728088 AACAAAACAGATTTTAGCATAGTTCG 57.272 30.769 0.00 0.00 35.79 3.95
3378 3932 7.305474 ACAAAACAGATTTTAGCATAGTTCGG 58.695 34.615 0.00 0.00 35.79 4.30
3379 3933 7.174253 ACAAAACAGATTTTAGCATAGTTCGGA 59.826 33.333 0.00 0.00 35.79 4.55
3380 3934 6.663944 AACAGATTTTAGCATAGTTCGGAC 57.336 37.500 0.00 0.00 0.00 4.79
3381 3935 5.730550 ACAGATTTTAGCATAGTTCGGACA 58.269 37.500 0.00 0.00 0.00 4.02
3382 3936 6.349300 ACAGATTTTAGCATAGTTCGGACAT 58.651 36.000 0.00 0.00 0.00 3.06
3383 3937 7.497595 ACAGATTTTAGCATAGTTCGGACATA 58.502 34.615 0.00 0.00 0.00 2.29
3384 3938 7.985184 ACAGATTTTAGCATAGTTCGGACATAA 59.015 33.333 0.00 0.00 0.00 1.90
3385 3939 8.276325 CAGATTTTAGCATAGTTCGGACATAAC 58.724 37.037 0.00 0.00 0.00 1.89
3386 3940 8.204836 AGATTTTAGCATAGTTCGGACATAACT 58.795 33.333 0.00 0.00 40.25 2.24
3387 3941 8.732746 ATTTTAGCATAGTTCGGACATAACTT 57.267 30.769 0.00 0.00 38.18 2.66
3388 3942 9.826574 ATTTTAGCATAGTTCGGACATAACTTA 57.173 29.630 0.00 0.00 38.18 2.24
3389 3943 8.638685 TTTAGCATAGTTCGGACATAACTTAC 57.361 34.615 0.00 0.00 38.18 2.34
3390 3944 6.216801 AGCATAGTTCGGACATAACTTACA 57.783 37.500 0.00 0.00 38.18 2.41
3391 3945 6.817184 AGCATAGTTCGGACATAACTTACAT 58.183 36.000 0.00 0.00 38.18 2.29
3392 3946 7.948357 AGCATAGTTCGGACATAACTTACATA 58.052 34.615 0.00 0.00 38.18 2.29
3393 3947 8.418662 AGCATAGTTCGGACATAACTTACATAA 58.581 33.333 0.00 0.00 38.18 1.90
3394 3948 9.037737 GCATAGTTCGGACATAACTTACATAAA 57.962 33.333 0.00 0.00 38.18 1.40
3397 3951 8.348983 AGTTCGGACATAACTTACATAAATCG 57.651 34.615 0.00 0.00 33.39 3.34
3398 3952 7.437267 AGTTCGGACATAACTTACATAAATCGG 59.563 37.037 0.00 0.00 33.39 4.18
3399 3953 7.041635 TCGGACATAACTTACATAAATCGGA 57.958 36.000 0.00 0.00 0.00 4.55
3400 3954 6.919662 TCGGACATAACTTACATAAATCGGAC 59.080 38.462 0.00 0.00 0.00 4.79
3401 3955 6.129273 CGGACATAACTTACATAAATCGGACG 60.129 42.308 0.00 0.00 0.00 4.79
3402 3956 6.919662 GGACATAACTTACATAAATCGGACGA 59.080 38.462 0.00 0.00 0.00 4.20
3403 3957 7.597743 GGACATAACTTACATAAATCGGACGAT 59.402 37.037 0.65 0.65 36.23 3.73
3404 3958 9.616634 GACATAACTTACATAAATCGGACGATA 57.383 33.333 7.72 0.00 33.97 2.92
3410 3964 9.537192 ACTTACATAAATCGGACGATATTTTGA 57.463 29.630 7.72 0.00 33.97 2.69
3411 3965 9.793245 CTTACATAAATCGGACGATATTTTGAC 57.207 33.333 7.72 0.00 33.97 3.18
3412 3966 9.537192 TTACATAAATCGGACGATATTTTGACT 57.463 29.630 7.72 0.00 33.97 3.41
3413 3967 7.851508 ACATAAATCGGACGATATTTTGACTG 58.148 34.615 7.72 3.29 33.97 3.51
3414 3968 7.494625 ACATAAATCGGACGATATTTTGACTGT 59.505 33.333 7.72 3.80 33.97 3.55
3415 3969 6.737254 AAATCGGACGATATTTTGACTGTT 57.263 33.333 7.72 0.00 33.97 3.16
3416 3970 6.737254 AATCGGACGATATTTTGACTGTTT 57.263 33.333 7.72 0.00 33.97 2.83
3417 3971 7.837202 AATCGGACGATATTTTGACTGTTTA 57.163 32.000 7.72 0.00 33.97 2.01
3418 3972 7.837202 ATCGGACGATATTTTGACTGTTTAA 57.163 32.000 5.27 0.00 32.36 1.52
3419 3973 7.052565 TCGGACGATATTTTGACTGTTTAAC 57.947 36.000 0.00 0.00 0.00 2.01
3420 3974 6.869913 TCGGACGATATTTTGACTGTTTAACT 59.130 34.615 0.00 0.00 0.00 2.24
3421 3975 8.028354 TCGGACGATATTTTGACTGTTTAACTA 58.972 33.333 0.00 0.00 0.00 2.24
3422 3976 8.814235 CGGACGATATTTTGACTGTTTAACTAT 58.186 33.333 0.00 0.00 0.00 2.12
3461 4015 7.690952 AAAACTAGGACGTTAAATTATGGCA 57.309 32.000 0.00 0.00 0.00 4.92
3462 4016 7.690952 AAACTAGGACGTTAAATTATGGCAA 57.309 32.000 0.00 0.00 0.00 4.52
3463 4017 7.690952 AACTAGGACGTTAAATTATGGCAAA 57.309 32.000 0.00 0.00 0.00 3.68
3464 4018 7.080353 ACTAGGACGTTAAATTATGGCAAAC 57.920 36.000 0.00 0.00 0.00 2.93
3465 4019 4.976987 AGGACGTTAAATTATGGCAAACG 58.023 39.130 15.87 15.87 46.11 3.60
3466 4020 4.696402 AGGACGTTAAATTATGGCAAACGA 59.304 37.500 22.21 0.00 44.11 3.85
3467 4021 4.789629 GGACGTTAAATTATGGCAAACGAC 59.210 41.667 22.21 16.84 44.11 4.34
3468 4022 4.396519 ACGTTAAATTATGGCAAACGACG 58.603 39.130 22.21 14.08 44.11 5.12
3469 4023 4.152045 ACGTTAAATTATGGCAAACGACGA 59.848 37.500 22.21 0.00 44.11 4.20
3470 4024 4.489493 CGTTAAATTATGGCAAACGACGAC 59.511 41.667 13.04 0.00 44.11 4.34
3471 4025 3.481112 AAATTATGGCAAACGACGACC 57.519 42.857 0.00 0.00 0.00 4.79
3472 4026 2.396590 ATTATGGCAAACGACGACCT 57.603 45.000 0.00 0.00 0.00 3.85
3473 4027 3.530265 ATTATGGCAAACGACGACCTA 57.470 42.857 0.00 0.00 0.00 3.08
3474 4028 2.572191 TATGGCAAACGACGACCTAG 57.428 50.000 0.00 0.00 0.00 3.02
3475 4029 0.739813 ATGGCAAACGACGACCTAGC 60.740 55.000 0.00 0.00 0.00 3.42
3476 4030 1.373748 GGCAAACGACGACCTAGCA 60.374 57.895 0.00 0.00 0.00 3.49
3477 4031 0.739813 GGCAAACGACGACCTAGCAT 60.740 55.000 0.00 0.00 0.00 3.79
3478 4032 0.370273 GCAAACGACGACCTAGCATG 59.630 55.000 0.00 0.00 0.00 4.06
3479 4033 0.370273 CAAACGACGACCTAGCATGC 59.630 55.000 10.51 10.51 0.00 4.06
3480 4034 1.076533 AAACGACGACCTAGCATGCG 61.077 55.000 13.01 0.00 0.00 4.73
3481 4035 2.102357 CGACGACCTAGCATGCGT 59.898 61.111 13.01 3.92 39.99 5.24
3482 4036 2.224217 CGACGACCTAGCATGCGTG 61.224 63.158 13.01 9.01 37.07 5.34
3483 4037 1.878522 GACGACCTAGCATGCGTGG 60.879 63.158 23.97 23.97 37.07 4.94
3484 4038 3.264897 CGACCTAGCATGCGTGGC 61.265 66.667 25.01 18.19 0.00 5.01
3485 4039 2.897350 GACCTAGCATGCGTGGCC 60.897 66.667 25.01 15.04 0.00 5.36
3486 4040 4.838152 ACCTAGCATGCGTGGCCG 62.838 66.667 25.01 9.53 37.07 6.13
3519 4073 4.796231 ACGCTGCCGTCATCGTCC 62.796 66.667 0.00 0.00 46.39 4.79
3520 4074 4.498520 CGCTGCCGTCATCGTCCT 62.499 66.667 0.00 0.00 35.01 3.85
3521 4075 2.125512 GCTGCCGTCATCGTCCTT 60.126 61.111 0.00 0.00 35.01 3.36
3522 4076 2.167861 GCTGCCGTCATCGTCCTTC 61.168 63.158 0.00 0.00 35.01 3.46
3523 4077 1.519455 CTGCCGTCATCGTCCTTCC 60.519 63.158 0.00 0.00 35.01 3.46
3524 4078 2.225791 CTGCCGTCATCGTCCTTCCA 62.226 60.000 0.00 0.00 35.01 3.53
3525 4079 1.519455 GCCGTCATCGTCCTTCCAG 60.519 63.158 0.00 0.00 35.01 3.86
3526 4080 1.519455 CCGTCATCGTCCTTCCAGC 60.519 63.158 0.00 0.00 35.01 4.85
3527 4081 1.874019 CGTCATCGTCCTTCCAGCG 60.874 63.158 0.00 0.00 0.00 5.18
3528 4082 1.215647 GTCATCGTCCTTCCAGCGT 59.784 57.895 0.00 0.00 0.00 5.07
3529 4083 1.078759 GTCATCGTCCTTCCAGCGTG 61.079 60.000 0.00 0.00 0.00 5.34
3530 4084 1.811266 CATCGTCCTTCCAGCGTGG 60.811 63.158 0.00 0.00 39.43 4.94
3531 4085 1.982395 ATCGTCCTTCCAGCGTGGA 60.982 57.895 3.02 3.02 46.61 4.02
3544 4098 4.754667 GTGGAAGGACGCGGGGAC 62.755 72.222 12.47 0.00 0.00 4.46
3546 4100 4.754667 GGAAGGACGCGGGGACAC 62.755 72.222 12.47 0.00 0.00 3.67
3567 4121 1.742761 GCAGCCTTGCTTGACTATCA 58.257 50.000 0.00 0.00 46.95 2.15
3568 4122 1.399791 GCAGCCTTGCTTGACTATCAC 59.600 52.381 0.00 0.00 46.95 3.06
3569 4123 2.012673 CAGCCTTGCTTGACTATCACC 58.987 52.381 0.00 0.00 36.40 4.02
3570 4124 1.009829 GCCTTGCTTGACTATCACCG 58.990 55.000 0.00 0.00 0.00 4.94
3571 4125 1.009829 CCTTGCTTGACTATCACCGC 58.990 55.000 0.00 0.00 0.00 5.68
3572 4126 1.009829 CTTGCTTGACTATCACCGCC 58.990 55.000 0.00 0.00 0.00 6.13
3573 4127 0.613260 TTGCTTGACTATCACCGCCT 59.387 50.000 0.00 0.00 0.00 5.52
3574 4128 0.108186 TGCTTGACTATCACCGCCTG 60.108 55.000 0.00 0.00 0.00 4.85
3575 4129 0.175760 GCTTGACTATCACCGCCTGA 59.824 55.000 0.00 0.00 0.00 3.86
3576 4130 1.927895 CTTGACTATCACCGCCTGAC 58.072 55.000 0.00 0.00 0.00 3.51
3577 4131 0.172578 TTGACTATCACCGCCTGACG 59.827 55.000 0.00 0.00 43.15 4.35
3578 4132 1.589196 GACTATCACCGCCTGACGC 60.589 63.158 0.00 0.00 41.76 5.19
3579 4133 2.005960 GACTATCACCGCCTGACGCT 62.006 60.000 0.00 0.00 41.76 5.07
3580 4134 0.750546 ACTATCACCGCCTGACGCTA 60.751 55.000 0.00 0.00 41.76 4.26
3581 4135 0.384309 CTATCACCGCCTGACGCTAA 59.616 55.000 0.00 0.00 41.76 3.09
3582 4136 1.000163 CTATCACCGCCTGACGCTAAT 60.000 52.381 0.00 0.00 41.76 1.73
3583 4137 0.530650 ATCACCGCCTGACGCTAATG 60.531 55.000 0.00 0.00 41.76 1.90
3584 4138 1.153647 CACCGCCTGACGCTAATGA 60.154 57.895 0.00 0.00 41.76 2.57
3585 4139 1.141881 ACCGCCTGACGCTAATGAG 59.858 57.895 0.00 0.00 41.76 2.90
3586 4140 1.592669 CCGCCTGACGCTAATGAGG 60.593 63.158 0.00 0.00 41.76 3.86
3587 4141 1.592669 CGCCTGACGCTAATGAGGG 60.593 63.158 0.00 0.00 41.37 4.30
3588 4142 1.227674 GCCTGACGCTAATGAGGGG 60.228 63.158 0.00 0.00 39.92 4.79
3589 4143 1.447643 CCTGACGCTAATGAGGGGG 59.552 63.158 0.00 0.00 39.92 5.40
3590 4144 1.338136 CCTGACGCTAATGAGGGGGT 61.338 60.000 0.00 0.00 39.92 4.95
3591 4145 0.541863 CTGACGCTAATGAGGGGGTT 59.458 55.000 0.00 0.00 39.92 4.11
3592 4146 0.251916 TGACGCTAATGAGGGGGTTG 59.748 55.000 0.00 0.00 39.92 3.77
3593 4147 0.252197 GACGCTAATGAGGGGGTTGT 59.748 55.000 0.00 0.00 39.92 3.32
3594 4148 0.696501 ACGCTAATGAGGGGGTTGTT 59.303 50.000 0.00 0.00 39.92 2.83
3595 4149 1.339727 ACGCTAATGAGGGGGTTGTTC 60.340 52.381 0.00 0.00 39.92 3.18
3596 4150 1.763968 GCTAATGAGGGGGTTGTTCC 58.236 55.000 0.00 0.00 0.00 3.62
3597 4151 2.017113 GCTAATGAGGGGGTTGTTCCG 61.017 57.143 0.00 0.00 37.00 4.30
3598 4152 0.034863 TAATGAGGGGGTTGTTCCGC 60.035 55.000 0.00 0.00 46.75 5.54
3601 4155 2.434774 AGGGGGTTGTTCCGCTTC 59.565 61.111 0.00 0.00 46.20 3.86
3602 4156 2.154074 AGGGGGTTGTTCCGCTTCT 61.154 57.895 0.00 0.00 46.20 2.85
3603 4157 1.228459 GGGGGTTGTTCCGCTTCTT 60.228 57.895 0.00 0.00 46.67 2.52
3604 4158 1.241990 GGGGGTTGTTCCGCTTCTTC 61.242 60.000 0.00 0.00 46.67 2.87
3605 4159 1.241990 GGGGTTGTTCCGCTTCTTCC 61.242 60.000 0.00 0.00 44.48 3.46
3606 4160 0.250770 GGGTTGTTCCGCTTCTTCCT 60.251 55.000 0.00 0.00 37.00 3.36
3607 4161 0.875059 GGTTGTTCCGCTTCTTCCTG 59.125 55.000 0.00 0.00 0.00 3.86
3608 4162 0.238553 GTTGTTCCGCTTCTTCCTGC 59.761 55.000 0.00 0.00 0.00 4.85
3613 4167 2.430921 CGCTTCTTCCTGCGTCGT 60.431 61.111 0.00 0.00 46.09 4.34
3614 4168 2.720758 CGCTTCTTCCTGCGTCGTG 61.721 63.158 0.00 0.00 46.09 4.35
3615 4169 3.016474 GCTTCTTCCTGCGTCGTGC 62.016 63.158 0.00 0.00 46.70 5.34
3632 4186 4.069232 CAGAGGGCCGCTTCGACA 62.069 66.667 7.20 0.00 0.00 4.35
3633 4187 3.311110 AGAGGGCCGCTTCGACAA 61.311 61.111 3.03 0.00 0.00 3.18
3634 4188 2.125106 GAGGGCCGCTTCGACAAT 60.125 61.111 0.00 0.00 0.00 2.71
3635 4189 2.436646 AGGGCCGCTTCGACAATG 60.437 61.111 0.00 0.00 0.00 2.82
3636 4190 2.746277 GGGCCGCTTCGACAATGT 60.746 61.111 0.00 0.00 0.00 2.71
3637 4191 2.332654 GGGCCGCTTCGACAATGTT 61.333 57.895 0.00 0.00 0.00 2.71
3638 4192 1.154225 GGCCGCTTCGACAATGTTG 60.154 57.895 0.00 0.00 0.00 3.33
3639 4193 1.154225 GCCGCTTCGACAATGTTGG 60.154 57.895 0.11 0.00 0.00 3.77
3640 4194 1.154225 CCGCTTCGACAATGTTGGC 60.154 57.895 0.11 0.00 0.00 4.52
3641 4195 1.154225 CGCTTCGACAATGTTGGCC 60.154 57.895 0.00 0.00 30.46 5.36
3642 4196 1.212751 GCTTCGACAATGTTGGCCC 59.787 57.895 0.00 0.00 30.46 5.80
3643 4197 1.883021 CTTCGACAATGTTGGCCCC 59.117 57.895 0.00 0.00 30.46 5.80
3644 4198 1.922135 CTTCGACAATGTTGGCCCCG 61.922 60.000 0.00 0.00 30.46 5.73
3645 4199 2.359354 CGACAATGTTGGCCCCGA 60.359 61.111 0.00 0.00 30.46 5.14
3646 4200 1.748879 CGACAATGTTGGCCCCGAT 60.749 57.895 0.00 0.00 30.46 4.18
3647 4201 1.714899 CGACAATGTTGGCCCCGATC 61.715 60.000 0.00 0.00 30.46 3.69
3648 4202 1.714899 GACAATGTTGGCCCCGATCG 61.715 60.000 8.51 8.51 0.00 3.69
3649 4203 2.828549 AATGTTGGCCCCGATCGC 60.829 61.111 10.32 0.00 0.00 4.58
3667 4221 4.162690 GGTGCCCTAGCGGAGGTG 62.163 72.222 6.92 0.71 45.03 4.00
3668 4222 4.840005 GTGCCCTAGCGGAGGTGC 62.840 72.222 6.92 9.61 45.03 5.01
3689 4243 1.859383 GCTTAGCGACCATTCCTCTC 58.141 55.000 0.00 0.00 0.00 3.20
3690 4244 1.539280 GCTTAGCGACCATTCCTCTCC 60.539 57.143 0.00 0.00 0.00 3.71
3691 4245 1.757118 CTTAGCGACCATTCCTCTCCA 59.243 52.381 0.00 0.00 0.00 3.86
3692 4246 1.860641 TAGCGACCATTCCTCTCCAA 58.139 50.000 0.00 0.00 0.00 3.53
3693 4247 0.250513 AGCGACCATTCCTCTCCAAC 59.749 55.000 0.00 0.00 0.00 3.77
3694 4248 0.744771 GCGACCATTCCTCTCCAACC 60.745 60.000 0.00 0.00 0.00 3.77
3695 4249 0.905357 CGACCATTCCTCTCCAACCT 59.095 55.000 0.00 0.00 0.00 3.50
3696 4250 1.279271 CGACCATTCCTCTCCAACCTT 59.721 52.381 0.00 0.00 0.00 3.50
3697 4251 2.716217 GACCATTCCTCTCCAACCTTG 58.284 52.381 0.00 0.00 0.00 3.61
3707 4261 2.267045 CCAACCTTGGCAAGCTACC 58.733 57.895 21.77 0.00 42.21 3.18
3708 4262 1.250840 CCAACCTTGGCAAGCTACCC 61.251 60.000 21.77 0.00 42.21 3.69
3709 4263 0.539438 CAACCTTGGCAAGCTACCCA 60.539 55.000 21.77 2.34 0.00 4.51
3710 4264 0.409484 AACCTTGGCAAGCTACCCAT 59.591 50.000 21.77 0.00 0.00 4.00
3711 4265 0.034089 ACCTTGGCAAGCTACCCATC 60.034 55.000 21.77 0.00 0.00 3.51
3712 4266 0.034186 CCTTGGCAAGCTACCCATCA 60.034 55.000 21.77 0.00 0.00 3.07
3713 4267 1.616725 CCTTGGCAAGCTACCCATCAA 60.617 52.381 21.77 0.00 0.00 2.57
3714 4268 1.747355 CTTGGCAAGCTACCCATCAAG 59.253 52.381 15.25 2.83 0.00 3.02
3715 4269 0.034186 TGGCAAGCTACCCATCAAGG 60.034 55.000 3.36 0.00 37.03 3.61
3716 4270 0.034089 GGCAAGCTACCCATCAAGGT 60.034 55.000 0.00 0.00 44.37 3.50
3717 4271 1.098050 GCAAGCTACCCATCAAGGTG 58.902 55.000 0.00 0.00 41.42 4.00
3718 4272 1.755179 CAAGCTACCCATCAAGGTGG 58.245 55.000 0.00 0.00 41.42 4.61
3720 4274 4.540153 CTACCCATCAAGGTGGCG 57.460 61.111 0.00 0.00 41.42 5.69
3721 4275 1.153168 CTACCCATCAAGGTGGCGG 60.153 63.158 0.00 0.00 41.42 6.13
3722 4276 3.338275 TACCCATCAAGGTGGCGGC 62.338 63.158 0.00 0.00 41.42 6.53
3740 4294 4.148825 GCCACCGCTCGTCCATCT 62.149 66.667 0.00 0.00 0.00 2.90
3741 4295 2.105128 CCACCGCTCGTCCATCTC 59.895 66.667 0.00 0.00 0.00 2.75
3742 4296 2.105128 CACCGCTCGTCCATCTCC 59.895 66.667 0.00 0.00 0.00 3.71
3743 4297 2.362503 ACCGCTCGTCCATCTCCA 60.363 61.111 0.00 0.00 0.00 3.86
3744 4298 1.758514 ACCGCTCGTCCATCTCCAT 60.759 57.895 0.00 0.00 0.00 3.41
3745 4299 1.300465 CCGCTCGTCCATCTCCATG 60.300 63.158 0.00 0.00 0.00 3.66
3753 4307 3.483954 CCATCTCCATGGTGGTGAC 57.516 57.895 25.35 0.00 44.46 3.67
3754 4308 0.620030 CCATCTCCATGGTGGTGACA 59.380 55.000 25.35 1.78 44.46 3.58
3755 4309 1.407851 CCATCTCCATGGTGGTGACAG 60.408 57.143 25.35 8.22 44.46 3.51
3756 4310 1.556451 CATCTCCATGGTGGTGACAGA 59.444 52.381 20.29 10.13 42.10 3.41
3757 4311 1.269958 TCTCCATGGTGGTGACAGAG 58.730 55.000 12.58 0.00 44.46 3.35
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
8 9 1.909302 ACCCTCCTGAACCTGTGTATG 59.091 52.381 0.00 0.00 0.00 2.39
13 14 0.903454 CGGTACCCTCCTGAACCTGT 60.903 60.000 6.25 0.00 0.00 4.00
30 31 0.100682 CACTATGACGTGGTCTCCGG 59.899 60.000 0.00 0.00 33.15 5.14
131 132 3.265791 CCTTCCCTTTCTTCGACTCATG 58.734 50.000 0.00 0.00 0.00 3.07
133 134 2.037251 CACCTTCCCTTTCTTCGACTCA 59.963 50.000 0.00 0.00 0.00 3.41
196 197 2.031919 GTGTGGATGTGGTCGCCA 59.968 61.111 0.00 0.00 0.00 5.69
348 349 1.300971 CCCCACAGTTGAGCGTCATG 61.301 60.000 0.00 0.00 0.00 3.07
350 351 1.978455 AACCCCACAGTTGAGCGTCA 61.978 55.000 0.00 0.00 0.00 4.35
351 352 0.034337 TAACCCCACAGTTGAGCGTC 59.966 55.000 0.00 0.00 0.00 5.19
366 367 3.140623 TGTACGGAAGCCAGTTTTAACC 58.859 45.455 0.00 0.00 0.00 2.85
378 379 5.006358 GCATGGTTATACACTTGTACGGAAG 59.994 44.000 0.00 0.00 32.72 3.46
380 381 4.160814 AGCATGGTTATACACTTGTACGGA 59.839 41.667 0.00 0.00 32.72 4.69
486 487 3.753272 AGCAGAAACAAGCATATCACGTT 59.247 39.130 0.00 0.00 0.00 3.99
489 490 4.730035 GCAGAGCAGAAACAAGCATATCAC 60.730 45.833 0.00 0.00 0.00 3.06
746 747 5.830991 TGGGAAGTATTATTACATTGGGCAC 59.169 40.000 0.00 0.00 0.00 5.01
767 773 4.175953 CATCAAGATGCAGCCCAATGGG 62.176 54.545 15.45 15.45 37.72 4.00
773 779 1.105759 GGGACATCAAGATGCAGCCC 61.106 60.000 15.78 15.78 42.39 5.19
836 842 2.827921 CAATCCTGAAAGTTTCCCTGGG 59.172 50.000 13.01 6.33 0.00 4.45
894 900 6.638168 CATATATTGCATACAGTGACGGAG 57.362 41.667 0.00 0.00 0.00 4.63
940 946 0.038526 ACTAAAGGTGCCGAGACACG 60.039 55.000 0.00 0.00 41.65 4.49
965 971 1.078759 CGCAGGGAGCAGAGTAAACG 61.079 60.000 0.00 0.00 46.13 3.60
1017 1023 1.528824 CCTCACCATGCCGGAGAAT 59.471 57.895 5.05 0.00 38.63 2.40
1059 1065 0.604780 TCTCGTCTTCGTCCTTCCGT 60.605 55.000 0.00 0.00 38.33 4.69
1208 1214 0.041663 CGGCGACAAAATGAACACGT 60.042 50.000 0.00 0.00 0.00 4.49
1255 1262 1.472662 ATCATCTTAGCCCCGGACGG 61.473 60.000 0.73 3.25 0.00 4.79
1310 1719 7.113658 TGTGTATCAACTTCCCTAGATCTTC 57.886 40.000 0.00 0.00 0.00 2.87
1351 1760 5.463724 CCAAAGCGTTCTAGTCAGATTATCC 59.536 44.000 0.00 0.00 0.00 2.59
1374 1785 4.369182 CGGTCACCTATATTCAGACAACC 58.631 47.826 0.00 0.00 0.00 3.77
1375 1786 3.802685 GCGGTCACCTATATTCAGACAAC 59.197 47.826 0.00 0.00 0.00 3.32
1493 1904 7.389053 AGTGAGAGAATAGGTCAACATGTTTTC 59.611 37.037 8.77 9.19 0.00 2.29
1655 2068 6.627287 GCCATCATACCCTTGAAGTTTTAACC 60.627 42.308 0.00 0.00 0.00 2.85
1729 2142 3.181467 GGAGAGCAGCATGTCTTCTATGT 60.181 47.826 0.00 0.00 39.31 2.29
1773 2186 9.731819 ATGGTAATTACTTCGATATGTATAGCG 57.268 33.333 15.05 3.35 42.90 4.26
1817 2237 8.579850 TTTAAATGTTCTACAATCCTGATGCT 57.420 30.769 0.00 0.00 0.00 3.79
1845 2265 6.464222 TGTGTAGTATGAGAAGAGGGTTTTG 58.536 40.000 0.00 0.00 0.00 2.44
1962 2392 7.840931 ACTTTCCTGAGAACTGTTGAAATTTT 58.159 30.769 0.00 0.00 0.00 1.82
2034 2464 1.065564 GCAGACTTTGAGGAGCTGGAT 60.066 52.381 0.00 0.00 0.00 3.41
2075 2505 2.103263 AGGCTTTTGTCTGACGAAGAGT 59.897 45.455 20.89 9.00 34.84 3.24
2088 2518 1.580845 CTCTGGCGGTGAGGCTTTTG 61.581 60.000 0.00 0.00 46.88 2.44
2099 2529 3.554342 CAGGGGATCCTCTGGCGG 61.554 72.222 31.35 8.07 42.67 6.13
2101 2531 3.883549 GGCAGGGGATCCTCTGGC 61.884 72.222 42.55 42.55 46.42 4.85
2214 2647 2.469465 TAGCTGCCTTGGTGTCTGCC 62.469 60.000 0.00 0.00 0.00 4.85
2215 2648 0.606401 TTAGCTGCCTTGGTGTCTGC 60.606 55.000 0.00 0.00 0.00 4.26
2312 2745 2.654912 GCCACCGTGACGTTCTTCG 61.655 63.158 3.64 0.00 46.00 3.79
2327 2760 4.039092 GAGCTCTTGGGGCAGCCA 62.039 66.667 15.19 0.00 36.17 4.75
2378 2811 0.813184 ATTGCCAGCATTGACCTTCG 59.187 50.000 0.00 0.00 0.00 3.79
2386 2819 2.983791 GCCACCATTGCCAGCATT 59.016 55.556 0.00 0.00 0.00 3.56
2405 2838 1.867233 CAACCGACACTCTTCTTGTGG 59.133 52.381 0.00 0.00 39.52 4.17
2460 2893 1.557269 ATCCTCTTCTTGTGGCGCCT 61.557 55.000 29.70 0.00 0.00 5.52
2477 2910 0.521735 GTCCTTTGCACCAACCGATC 59.478 55.000 0.00 0.00 0.00 3.69
2478 2911 0.893727 GGTCCTTTGCACCAACCGAT 60.894 55.000 0.00 0.00 33.63 4.18
2501 2934 2.823593 CATTGCCGGCATCGACCA 60.824 61.111 33.25 15.45 39.00 4.02
2521 2954 2.323580 GCACTCTTCTTGCAGCGCT 61.324 57.895 2.64 2.64 39.93 5.92
2596 3029 0.035458 CTGTTCCTTCCTCTTGCCGT 59.965 55.000 0.00 0.00 0.00 5.68
2612 3045 4.008933 GCTCGTGGCCACCTCTGT 62.009 66.667 29.95 0.00 34.27 3.41
2625 3058 1.226888 GTTACCAGTAGCCGGCTCG 60.227 63.158 36.73 22.48 0.00 5.03
2723 3156 0.897621 CTTTCCATGGCTTCCAACCC 59.102 55.000 6.96 0.00 36.95 4.11
2799 3257 1.672881 CCGAATGTTGCCATCTCCTTC 59.327 52.381 0.00 0.00 0.00 3.46
2800 3258 1.004745 ACCGAATGTTGCCATCTCCTT 59.995 47.619 0.00 0.00 0.00 3.36
2801 3259 0.620556 ACCGAATGTTGCCATCTCCT 59.379 50.000 0.00 0.00 0.00 3.69
2802 3260 1.401905 GAACCGAATGTTGCCATCTCC 59.598 52.381 0.00 0.00 37.29 3.71
2803 3261 2.083774 TGAACCGAATGTTGCCATCTC 58.916 47.619 0.00 0.00 37.29 2.75
2804 3262 2.086869 CTGAACCGAATGTTGCCATCT 58.913 47.619 0.00 0.00 37.29 2.90
2805 3263 2.083774 TCTGAACCGAATGTTGCCATC 58.916 47.619 0.00 0.00 37.29 3.51
2806 3264 2.198827 TCTGAACCGAATGTTGCCAT 57.801 45.000 0.00 0.00 37.29 4.40
2807 3265 1.974265 TTCTGAACCGAATGTTGCCA 58.026 45.000 0.00 0.00 37.29 4.92
2808 3266 3.004315 TCTTTTCTGAACCGAATGTTGCC 59.996 43.478 0.00 0.00 37.29 4.52
2809 3267 4.223320 TCTTTTCTGAACCGAATGTTGC 57.777 40.909 0.00 0.00 37.29 4.17
2810 3268 5.821204 AGTTCTTTTCTGAACCGAATGTTG 58.179 37.500 4.08 0.00 45.25 3.33
2811 3269 6.451064 AAGTTCTTTTCTGAACCGAATGTT 57.549 33.333 4.08 0.00 45.25 2.71
2812 3270 6.094881 TGAAAGTTCTTTTCTGAACCGAATGT 59.905 34.615 4.08 0.00 45.25 2.71
2813 3271 6.494842 TGAAAGTTCTTTTCTGAACCGAATG 58.505 36.000 4.08 0.00 45.25 2.67
2814 3272 6.693315 TGAAAGTTCTTTTCTGAACCGAAT 57.307 33.333 4.08 0.00 45.25 3.34
2815 3273 6.119144 CTGAAAGTTCTTTTCTGAACCGAA 57.881 37.500 4.08 0.00 45.25 4.30
2816 3274 5.734855 CTGAAAGTTCTTTTCTGAACCGA 57.265 39.130 4.08 0.00 45.25 4.69
2871 3412 9.713740 CTCTACTGCAAAATATGAACAATCTTC 57.286 33.333 0.00 0.00 0.00 2.87
2892 3433 6.595772 CAGCTACATGGTGAAAATCTCTAC 57.404 41.667 0.00 0.00 46.27 2.59
2980 3521 4.854399 TCTTTTACTGAATGCAACAACGG 58.146 39.130 0.00 0.00 0.00 4.44
2986 3527 7.966246 AATGCATTTCTTTTACTGAATGCAA 57.034 28.000 21.60 9.48 39.17 4.08
3017 3558 5.213891 AGAAATGAACCCGCAATTTTCTT 57.786 34.783 0.00 0.00 31.30 2.52
3018 3559 4.871933 AGAAATGAACCCGCAATTTTCT 57.128 36.364 0.00 0.00 0.00 2.52
3019 3560 6.329496 TCATAGAAATGAACCCGCAATTTTC 58.671 36.000 0.00 0.00 39.20 2.29
3020 3561 6.279513 TCATAGAAATGAACCCGCAATTTT 57.720 33.333 0.00 0.00 39.20 1.82
3021 3562 5.913137 TCATAGAAATGAACCCGCAATTT 57.087 34.783 0.00 0.00 39.20 1.82
3022 3563 5.913137 TTCATAGAAATGAACCCGCAATT 57.087 34.783 0.00 0.00 45.17 2.32
3058 3612 0.506932 ATGCGTGACGAGTTGTTTCG 59.493 50.000 10.10 4.58 45.70 3.46
3070 3624 3.499157 GGGTTTTGTACTTGTATGCGTGA 59.501 43.478 0.00 0.00 0.00 4.35
3071 3625 3.251245 TGGGTTTTGTACTTGTATGCGTG 59.749 43.478 0.00 0.00 0.00 5.34
3072 3626 3.251487 GTGGGTTTTGTACTTGTATGCGT 59.749 43.478 0.00 0.00 0.00 5.24
3073 3627 3.251245 TGTGGGTTTTGTACTTGTATGCG 59.749 43.478 0.00 0.00 0.00 4.73
3074 3628 4.517453 TCTGTGGGTTTTGTACTTGTATGC 59.483 41.667 0.00 0.00 0.00 3.14
3075 3629 5.334879 GCTCTGTGGGTTTTGTACTTGTATG 60.335 44.000 0.00 0.00 0.00 2.39
3076 3630 4.760204 GCTCTGTGGGTTTTGTACTTGTAT 59.240 41.667 0.00 0.00 0.00 2.29
3077 3631 4.131596 GCTCTGTGGGTTTTGTACTTGTA 58.868 43.478 0.00 0.00 0.00 2.41
3078 3632 2.949644 GCTCTGTGGGTTTTGTACTTGT 59.050 45.455 0.00 0.00 0.00 3.16
3079 3633 3.214328 AGCTCTGTGGGTTTTGTACTTG 58.786 45.455 0.00 0.00 0.00 3.16
3080 3634 3.577805 AGCTCTGTGGGTTTTGTACTT 57.422 42.857 0.00 0.00 0.00 2.24
3081 3635 3.244457 GGTAGCTCTGTGGGTTTTGTACT 60.244 47.826 0.00 0.00 0.00 2.73
3082 3636 3.072211 GGTAGCTCTGTGGGTTTTGTAC 58.928 50.000 0.00 0.00 0.00 2.90
3083 3637 2.706723 TGGTAGCTCTGTGGGTTTTGTA 59.293 45.455 0.00 0.00 0.00 2.41
3084 3638 1.493022 TGGTAGCTCTGTGGGTTTTGT 59.507 47.619 0.00 0.00 0.00 2.83
3085 3639 2.270352 TGGTAGCTCTGTGGGTTTTG 57.730 50.000 0.00 0.00 0.00 2.44
3086 3640 4.222124 CTATGGTAGCTCTGTGGGTTTT 57.778 45.455 0.00 0.00 0.00 2.43
3087 3641 3.914426 CTATGGTAGCTCTGTGGGTTT 57.086 47.619 0.00 0.00 0.00 3.27
3099 3653 1.630148 GCTAATCGCGGCTATGGTAG 58.370 55.000 6.13 0.00 0.00 3.18
3100 3654 0.245539 GGCTAATCGCGGCTATGGTA 59.754 55.000 6.13 0.00 40.44 3.25
3101 3655 1.004918 GGCTAATCGCGGCTATGGT 60.005 57.895 6.13 0.00 40.44 3.55
3102 3656 0.530744 TAGGCTAATCGCGGCTATGG 59.469 55.000 6.13 0.00 40.44 2.74
3103 3657 2.586258 ATAGGCTAATCGCGGCTATG 57.414 50.000 6.13 0.00 45.18 2.23
3105 3659 4.081862 ACATTAATAGGCTAATCGCGGCTA 60.082 41.667 6.13 0.00 42.62 3.93
3106 3660 3.262420 CATTAATAGGCTAATCGCGGCT 58.738 45.455 6.13 0.00 40.44 5.52
3107 3661 3.000727 ACATTAATAGGCTAATCGCGGC 58.999 45.455 6.13 0.19 40.44 6.53
3108 3662 4.688879 TGAACATTAATAGGCTAATCGCGG 59.311 41.667 6.13 0.00 40.44 6.46
3109 3663 5.668866 GCTGAACATTAATAGGCTAATCGCG 60.669 44.000 0.00 0.00 40.44 5.87
3110 3664 5.179368 TGCTGAACATTAATAGGCTAATCGC 59.821 40.000 0.00 0.00 38.13 4.58
3111 3665 6.347725 GGTGCTGAACATTAATAGGCTAATCG 60.348 42.308 0.00 0.00 0.00 3.34
3112 3666 6.486657 TGGTGCTGAACATTAATAGGCTAATC 59.513 38.462 0.00 0.00 0.00 1.75
3113 3667 6.364701 TGGTGCTGAACATTAATAGGCTAAT 58.635 36.000 0.00 0.00 0.00 1.73
3114 3668 5.750524 TGGTGCTGAACATTAATAGGCTAA 58.249 37.500 0.00 0.00 0.00 3.09
3115 3669 5.104527 ACTGGTGCTGAACATTAATAGGCTA 60.105 40.000 0.00 0.00 0.00 3.93
3116 3670 4.202441 CTGGTGCTGAACATTAATAGGCT 58.798 43.478 0.00 0.00 0.00 4.58
3117 3671 3.947834 ACTGGTGCTGAACATTAATAGGC 59.052 43.478 0.00 0.00 0.00 3.93
3118 3672 5.431765 AGACTGGTGCTGAACATTAATAGG 58.568 41.667 0.00 0.00 0.00 2.57
3119 3673 7.010552 GTGTAGACTGGTGCTGAACATTAATAG 59.989 40.741 0.00 0.00 0.00 1.73
3120 3674 6.816640 GTGTAGACTGGTGCTGAACATTAATA 59.183 38.462 0.00 0.00 0.00 0.98
3121 3675 5.643777 GTGTAGACTGGTGCTGAACATTAAT 59.356 40.000 0.00 0.00 0.00 1.40
3122 3676 4.994852 GTGTAGACTGGTGCTGAACATTAA 59.005 41.667 0.00 0.00 0.00 1.40
3123 3677 4.283467 AGTGTAGACTGGTGCTGAACATTA 59.717 41.667 0.00 0.00 0.00 1.90
3124 3678 3.071602 AGTGTAGACTGGTGCTGAACATT 59.928 43.478 0.00 0.00 0.00 2.71
3125 3679 2.634940 AGTGTAGACTGGTGCTGAACAT 59.365 45.455 0.00 0.00 0.00 2.71
3126 3680 2.039418 AGTGTAGACTGGTGCTGAACA 58.961 47.619 0.00 0.00 0.00 3.18
3127 3681 2.821991 AGTGTAGACTGGTGCTGAAC 57.178 50.000 0.00 0.00 0.00 3.18
3128 3682 2.826128 CCTAGTGTAGACTGGTGCTGAA 59.174 50.000 2.10 0.00 33.21 3.02
3129 3683 2.041216 TCCTAGTGTAGACTGGTGCTGA 59.959 50.000 2.10 0.00 33.21 4.26
3130 3684 2.425312 CTCCTAGTGTAGACTGGTGCTG 59.575 54.545 2.10 0.00 33.21 4.41
3131 3685 2.041891 ACTCCTAGTGTAGACTGGTGCT 59.958 50.000 2.10 0.00 33.21 4.40
3132 3686 2.164624 CACTCCTAGTGTAGACTGGTGC 59.835 54.545 2.10 0.00 41.19 5.01
3144 3698 3.393360 GCCAGGTGCACTCCTAGT 58.607 61.111 17.98 0.00 40.77 2.57
3153 3707 1.444119 TTTTCTCGTGTGCCAGGTGC 61.444 55.000 0.00 0.00 41.77 5.01
3154 3708 1.021202 TTTTTCTCGTGTGCCAGGTG 58.979 50.000 0.00 0.00 0.00 4.00
3155 3709 3.487576 TTTTTCTCGTGTGCCAGGT 57.512 47.368 0.00 0.00 0.00 4.00
3173 3727 3.578282 CCAAGTTGTAGAGGGGCATTTTT 59.422 43.478 1.45 0.00 0.00 1.94
3174 3728 3.165071 CCAAGTTGTAGAGGGGCATTTT 58.835 45.455 1.45 0.00 0.00 1.82
3175 3729 2.557452 CCCAAGTTGTAGAGGGGCATTT 60.557 50.000 1.45 0.00 37.66 2.32
3176 3730 1.005924 CCCAAGTTGTAGAGGGGCATT 59.994 52.381 1.45 0.00 37.66 3.56
3177 3731 0.625849 CCCAAGTTGTAGAGGGGCAT 59.374 55.000 1.45 0.00 37.66 4.40
3178 3732 2.074967 CCCAAGTTGTAGAGGGGCA 58.925 57.895 1.45 0.00 37.66 5.36
3180 3734 1.303282 GGCCCAAGTTGTAGAGGGG 59.697 63.158 1.45 0.00 41.75 4.79
3181 3735 0.035056 CTGGCCCAAGTTGTAGAGGG 60.035 60.000 0.00 0.00 44.37 4.30
3182 3736 0.678048 GCTGGCCCAAGTTGTAGAGG 60.678 60.000 0.00 0.00 0.00 3.69
3183 3737 0.036732 TGCTGGCCCAAGTTGTAGAG 59.963 55.000 0.00 0.00 0.00 2.43
3184 3738 0.476338 TTGCTGGCCCAAGTTGTAGA 59.524 50.000 0.00 0.00 0.00 2.59
3185 3739 0.598065 GTTGCTGGCCCAAGTTGTAG 59.402 55.000 0.00 0.00 0.00 2.74
3186 3740 0.184933 AGTTGCTGGCCCAAGTTGTA 59.815 50.000 0.00 0.00 0.00 2.41
3187 3741 1.076044 AGTTGCTGGCCCAAGTTGT 60.076 52.632 0.00 0.00 0.00 3.32
3188 3742 1.662044 GAGTTGCTGGCCCAAGTTG 59.338 57.895 0.00 0.00 0.00 3.16
3189 3743 1.531602 GGAGTTGCTGGCCCAAGTT 60.532 57.895 0.00 0.00 0.00 2.66
3190 3744 2.085343 ATGGAGTTGCTGGCCCAAGT 62.085 55.000 0.00 0.03 31.77 3.16
3191 3745 0.034186 TATGGAGTTGCTGGCCCAAG 60.034 55.000 0.00 0.00 31.77 3.61
3192 3746 0.630673 ATATGGAGTTGCTGGCCCAA 59.369 50.000 0.00 0.00 31.77 4.12
3193 3747 1.421268 CTATATGGAGTTGCTGGCCCA 59.579 52.381 0.00 0.00 0.00 5.36
3194 3748 1.884067 GCTATATGGAGTTGCTGGCCC 60.884 57.143 0.00 0.00 0.00 5.80
3195 3749 1.072965 AGCTATATGGAGTTGCTGGCC 59.927 52.381 0.00 0.00 32.32 5.36
3196 3750 2.149578 CAGCTATATGGAGTTGCTGGC 58.850 52.381 0.00 0.00 44.95 4.85
3199 3753 4.202441 CAAACCAGCTATATGGAGTTGCT 58.798 43.478 0.00 0.00 43.57 3.91
3200 3754 3.947834 ACAAACCAGCTATATGGAGTTGC 59.052 43.478 0.00 0.00 43.57 4.17
3201 3755 4.576463 GGACAAACCAGCTATATGGAGTTG 59.424 45.833 0.00 6.16 43.57 3.16
3202 3756 4.227300 TGGACAAACCAGCTATATGGAGTT 59.773 41.667 0.00 0.00 44.64 3.01
3203 3757 3.780294 TGGACAAACCAGCTATATGGAGT 59.220 43.478 0.00 0.00 44.64 3.85
3204 3758 4.422073 TGGACAAACCAGCTATATGGAG 57.578 45.455 0.00 0.00 44.64 3.86
3216 3770 0.953960 CGGTGCTAGGTGGACAAACC 60.954 60.000 0.00 0.00 38.87 3.27
3217 3771 0.250166 ACGGTGCTAGGTGGACAAAC 60.250 55.000 0.00 0.00 38.87 2.93
3218 3772 1.340088 TACGGTGCTAGGTGGACAAA 58.660 50.000 0.00 0.00 38.87 2.83
3219 3773 1.479323 GATACGGTGCTAGGTGGACAA 59.521 52.381 0.00 0.00 38.87 3.18
3220 3774 1.108776 GATACGGTGCTAGGTGGACA 58.891 55.000 0.00 0.00 38.87 4.02
3221 3775 0.388294 GGATACGGTGCTAGGTGGAC 59.612 60.000 0.00 0.00 36.19 4.02
3222 3776 2.816746 GGATACGGTGCTAGGTGGA 58.183 57.895 0.00 0.00 0.00 4.02
3235 3789 1.065928 CCGGTCTGCAGACGGATAC 59.934 63.158 40.45 26.08 45.65 2.24
3236 3790 1.379443 ACCGGTCTGCAGACGGATA 60.379 57.895 39.79 14.09 45.65 2.59
3237 3791 2.680352 ACCGGTCTGCAGACGGAT 60.680 61.111 39.79 30.75 45.65 4.18
3238 3792 3.680786 CACCGGTCTGCAGACGGA 61.681 66.667 39.79 15.27 45.65 4.69
3239 3793 4.742201 CCACCGGTCTGCAGACGG 62.742 72.222 35.46 35.46 45.65 4.79
3240 3794 3.633094 CTCCACCGGTCTGCAGACG 62.633 68.421 34.28 28.23 45.65 4.18
3241 3795 2.262915 CTCCACCGGTCTGCAGAC 59.737 66.667 34.25 34.25 44.04 3.51
3242 3796 2.117423 TCTCCACCGGTCTGCAGA 59.883 61.111 13.74 13.74 0.00 4.26
3243 3797 2.262915 GTCTCCACCGGTCTGCAG 59.737 66.667 2.59 7.63 0.00 4.41
3244 3798 3.311110 GGTCTCCACCGGTCTGCA 61.311 66.667 2.59 0.00 31.06 4.41
3252 3806 0.391597 TTCACAAGTCGGTCTCCACC 59.608 55.000 0.00 0.00 39.69 4.61
3253 3807 1.202486 TGTTCACAAGTCGGTCTCCAC 60.202 52.381 0.00 0.00 0.00 4.02
3254 3808 1.116308 TGTTCACAAGTCGGTCTCCA 58.884 50.000 0.00 0.00 0.00 3.86
3255 3809 2.457366 ATGTTCACAAGTCGGTCTCC 57.543 50.000 0.00 0.00 0.00 3.71
3256 3810 3.390135 TCAATGTTCACAAGTCGGTCTC 58.610 45.455 0.00 0.00 0.00 3.36
3257 3811 3.469008 TCAATGTTCACAAGTCGGTCT 57.531 42.857 0.00 0.00 0.00 3.85
3258 3812 3.498397 ACATCAATGTTCACAAGTCGGTC 59.502 43.478 0.00 0.00 37.90 4.79
3259 3813 3.250762 CACATCAATGTTCACAAGTCGGT 59.749 43.478 0.00 0.00 39.39 4.69
3260 3814 3.498018 TCACATCAATGTTCACAAGTCGG 59.502 43.478 0.00 0.00 39.39 4.79
3261 3815 4.730600 TCACATCAATGTTCACAAGTCG 57.269 40.909 0.00 0.00 39.39 4.18
3262 3816 5.400485 GCTTTCACATCAATGTTCACAAGTC 59.600 40.000 0.00 0.00 39.39 3.01
3263 3817 5.284079 GCTTTCACATCAATGTTCACAAGT 58.716 37.500 0.00 0.00 39.39 3.16
3264 3818 4.682860 GGCTTTCACATCAATGTTCACAAG 59.317 41.667 0.00 0.00 39.39 3.16
3265 3819 4.619973 GGCTTTCACATCAATGTTCACAA 58.380 39.130 0.00 0.00 39.39 3.33
3266 3820 3.304592 CGGCTTTCACATCAATGTTCACA 60.305 43.478 0.00 0.00 39.39 3.58
3267 3821 3.236816 CGGCTTTCACATCAATGTTCAC 58.763 45.455 0.00 0.00 39.39 3.18
3268 3822 2.228582 CCGGCTTTCACATCAATGTTCA 59.771 45.455 0.00 0.00 39.39 3.18
3269 3823 2.867429 CCGGCTTTCACATCAATGTTC 58.133 47.619 0.00 0.00 39.39 3.18
3270 3824 1.067635 GCCGGCTTTCACATCAATGTT 60.068 47.619 22.15 0.00 39.39 2.71
3271 3825 0.527565 GCCGGCTTTCACATCAATGT 59.472 50.000 22.15 0.00 42.84 2.71
3272 3826 0.179129 GGCCGGCTTTCACATCAATG 60.179 55.000 28.56 0.00 0.00 2.82
3273 3827 0.611618 TGGCCGGCTTTCACATCAAT 60.612 50.000 28.56 0.00 0.00 2.57
3274 3828 0.611618 ATGGCCGGCTTTCACATCAA 60.612 50.000 28.56 0.00 0.00 2.57
3275 3829 0.611618 AATGGCCGGCTTTCACATCA 60.612 50.000 28.56 13.66 0.00 3.07
3276 3830 0.101219 GAATGGCCGGCTTTCACATC 59.899 55.000 28.56 13.77 0.00 3.06
3277 3831 0.611618 TGAATGGCCGGCTTTCACAT 60.612 50.000 29.35 20.87 0.00 3.21
3278 3832 0.825425 TTGAATGGCCGGCTTTCACA 60.825 50.000 31.47 21.06 0.00 3.58
3279 3833 0.532115 ATTGAATGGCCGGCTTTCAC 59.468 50.000 31.47 16.61 0.00 3.18
3280 3834 0.817013 GATTGAATGGCCGGCTTTCA 59.183 50.000 29.35 29.35 0.00 2.69
3281 3835 0.248621 CGATTGAATGGCCGGCTTTC 60.249 55.000 28.56 26.96 0.00 2.62
3282 3836 1.666209 CCGATTGAATGGCCGGCTTT 61.666 55.000 28.56 20.31 35.29 3.51
3283 3837 2.120909 CCGATTGAATGGCCGGCTT 61.121 57.895 28.56 14.46 35.29 4.35
3284 3838 2.516930 CCGATTGAATGGCCGGCT 60.517 61.111 28.56 6.33 35.29 5.52
3285 3839 2.515991 TCCGATTGAATGGCCGGC 60.516 61.111 21.18 21.18 41.55 6.13
3286 3840 2.186826 GGTCCGATTGAATGGCCGG 61.187 63.158 0.00 0.00 43.02 6.13
3287 3841 2.186826 GGGTCCGATTGAATGGCCG 61.187 63.158 0.00 0.00 0.00 6.13
3288 3842 2.186826 CGGGTCCGATTGAATGGCC 61.187 63.158 2.83 0.00 42.83 5.36
3289 3843 2.834618 GCGGGTCCGATTGAATGGC 61.835 63.158 14.15 0.00 42.83 4.40
3290 3844 0.819259 ATGCGGGTCCGATTGAATGG 60.819 55.000 14.15 0.00 42.83 3.16
3291 3845 1.531149 GTATGCGGGTCCGATTGAATG 59.469 52.381 14.15 0.00 42.83 2.67
3292 3846 1.140052 TGTATGCGGGTCCGATTGAAT 59.860 47.619 14.15 1.19 42.83 2.57
3293 3847 0.537653 TGTATGCGGGTCCGATTGAA 59.462 50.000 14.15 0.00 42.83 2.69
3294 3848 0.756294 ATGTATGCGGGTCCGATTGA 59.244 50.000 14.15 0.00 42.83 2.57
3295 3849 1.593196 AATGTATGCGGGTCCGATTG 58.407 50.000 14.15 0.00 42.83 2.67
3296 3850 2.218603 GAAATGTATGCGGGTCCGATT 58.781 47.619 14.15 0.67 42.83 3.34
3297 3851 1.140052 TGAAATGTATGCGGGTCCGAT 59.860 47.619 14.15 6.59 42.83 4.18
3298 3852 0.537653 TGAAATGTATGCGGGTCCGA 59.462 50.000 14.15 0.00 42.83 4.55
3299 3853 1.374560 TTGAAATGTATGCGGGTCCG 58.625 50.000 4.85 4.85 43.09 4.79
3300 3854 3.057174 TGTTTTGAAATGTATGCGGGTCC 60.057 43.478 0.00 0.00 0.00 4.46
3301 3855 4.167554 TGTTTTGAAATGTATGCGGGTC 57.832 40.909 0.00 0.00 0.00 4.46
3302 3856 4.592485 TTGTTTTGAAATGTATGCGGGT 57.408 36.364 0.00 0.00 0.00 5.28
3303 3857 4.987912 ACTTTGTTTTGAAATGTATGCGGG 59.012 37.500 0.00 0.00 0.00 6.13
3304 3858 6.199908 TCAACTTTGTTTTGAAATGTATGCGG 59.800 34.615 0.00 0.00 29.89 5.69
3305 3859 7.159437 TCAACTTTGTTTTGAAATGTATGCG 57.841 32.000 0.00 0.00 29.89 4.73
3315 3869 9.658799 TGTCCAATTTATTCAACTTTGTTTTGA 57.341 25.926 0.00 0.00 0.00 2.69
3336 3890 9.658799 TCTGTTTTGTTTGATAAAATTTGTCCA 57.341 25.926 0.12 0.00 30.62 4.02
3351 3905 9.180678 CGAACTATGCTAAAATCTGTTTTGTTT 57.819 29.630 0.00 0.00 38.01 2.83
3352 3906 7.807907 CCGAACTATGCTAAAATCTGTTTTGTT 59.192 33.333 0.00 0.00 38.01 2.83
3353 3907 7.174253 TCCGAACTATGCTAAAATCTGTTTTGT 59.826 33.333 0.00 0.00 38.01 2.83
3354 3908 7.481798 GTCCGAACTATGCTAAAATCTGTTTTG 59.518 37.037 0.00 0.00 38.01 2.44
3355 3909 7.174253 TGTCCGAACTATGCTAAAATCTGTTTT 59.826 33.333 0.00 0.00 40.48 2.43
3356 3910 6.653320 TGTCCGAACTATGCTAAAATCTGTTT 59.347 34.615 0.00 0.00 0.00 2.83
3357 3911 6.170506 TGTCCGAACTATGCTAAAATCTGTT 58.829 36.000 0.00 0.00 0.00 3.16
3358 3912 5.730550 TGTCCGAACTATGCTAAAATCTGT 58.269 37.500 0.00 0.00 0.00 3.41
3359 3913 6.851222 ATGTCCGAACTATGCTAAAATCTG 57.149 37.500 0.00 0.00 0.00 2.90
3360 3914 8.204836 AGTTATGTCCGAACTATGCTAAAATCT 58.795 33.333 0.00 0.00 35.36 2.40
3361 3915 8.366671 AGTTATGTCCGAACTATGCTAAAATC 57.633 34.615 0.00 0.00 35.36 2.17
3362 3916 8.732746 AAGTTATGTCCGAACTATGCTAAAAT 57.267 30.769 0.00 0.00 36.10 1.82
3363 3917 9.090692 GTAAGTTATGTCCGAACTATGCTAAAA 57.909 33.333 0.00 0.00 36.10 1.52
3364 3918 8.252417 TGTAAGTTATGTCCGAACTATGCTAAA 58.748 33.333 0.00 0.00 36.10 1.85
3365 3919 7.774134 TGTAAGTTATGTCCGAACTATGCTAA 58.226 34.615 0.00 0.00 36.10 3.09
3366 3920 7.337480 TGTAAGTTATGTCCGAACTATGCTA 57.663 36.000 0.00 0.00 36.10 3.49
3367 3921 6.216801 TGTAAGTTATGTCCGAACTATGCT 57.783 37.500 0.00 0.00 36.10 3.79
3368 3922 8.583810 TTATGTAAGTTATGTCCGAACTATGC 57.416 34.615 0.00 0.00 36.10 3.14
3371 3925 9.454585 CGATTTATGTAAGTTATGTCCGAACTA 57.545 33.333 0.00 0.00 36.10 2.24
3372 3926 7.437267 CCGATTTATGTAAGTTATGTCCGAACT 59.563 37.037 0.00 0.00 38.81 3.01
3373 3927 7.436080 TCCGATTTATGTAAGTTATGTCCGAAC 59.564 37.037 0.00 0.00 0.00 3.95
3374 3928 7.436080 GTCCGATTTATGTAAGTTATGTCCGAA 59.564 37.037 0.00 0.00 0.00 4.30
3375 3929 6.919662 GTCCGATTTATGTAAGTTATGTCCGA 59.080 38.462 0.00 0.00 0.00 4.55
3376 3930 6.129273 CGTCCGATTTATGTAAGTTATGTCCG 60.129 42.308 0.00 0.00 0.00 4.79
3377 3931 6.919662 TCGTCCGATTTATGTAAGTTATGTCC 59.080 38.462 0.00 0.00 0.00 4.02
3378 3932 7.919313 TCGTCCGATTTATGTAAGTTATGTC 57.081 36.000 0.00 0.00 0.00 3.06
3384 3938 9.537192 TCAAAATATCGTCCGATTTATGTAAGT 57.463 29.630 7.57 0.00 36.17 2.24
3385 3939 9.793245 GTCAAAATATCGTCCGATTTATGTAAG 57.207 33.333 7.57 0.00 36.17 2.34
3386 3940 9.537192 AGTCAAAATATCGTCCGATTTATGTAA 57.463 29.630 7.57 0.00 36.17 2.41
3387 3941 8.974408 CAGTCAAAATATCGTCCGATTTATGTA 58.026 33.333 7.57 0.00 36.17 2.29
3388 3942 7.494625 ACAGTCAAAATATCGTCCGATTTATGT 59.505 33.333 7.57 1.70 36.17 2.29
3389 3943 7.851508 ACAGTCAAAATATCGTCCGATTTATG 58.148 34.615 7.57 4.07 36.17 1.90
3390 3944 8.433421 AACAGTCAAAATATCGTCCGATTTAT 57.567 30.769 7.57 0.00 36.17 1.40
3391 3945 7.837202 AACAGTCAAAATATCGTCCGATTTA 57.163 32.000 7.57 0.00 36.17 1.40
3392 3946 6.737254 AACAGTCAAAATATCGTCCGATTT 57.263 33.333 7.57 0.00 36.17 2.17
3393 3947 6.737254 AAACAGTCAAAATATCGTCCGATT 57.263 33.333 7.57 0.00 36.17 3.34
3394 3948 7.548075 AGTTAAACAGTCAAAATATCGTCCGAT 59.452 33.333 7.41 7.41 38.54 4.18
3395 3949 6.869913 AGTTAAACAGTCAAAATATCGTCCGA 59.130 34.615 0.00 0.00 0.00 4.55
3396 3950 7.057149 AGTTAAACAGTCAAAATATCGTCCG 57.943 36.000 0.00 0.00 0.00 4.79
3435 3989 9.228949 TGCCATAATTTAACGTCCTAGTTTTTA 57.771 29.630 0.00 0.00 35.70 1.52
3436 3990 8.113173 TGCCATAATTTAACGTCCTAGTTTTT 57.887 30.769 0.00 0.00 35.70 1.94
3437 3991 7.690952 TGCCATAATTTAACGTCCTAGTTTT 57.309 32.000 0.00 0.00 35.70 2.43
3438 3992 7.690952 TTGCCATAATTTAACGTCCTAGTTT 57.309 32.000 0.00 0.00 35.70 2.66
3439 3993 7.532571 GTTTGCCATAATTTAACGTCCTAGTT 58.467 34.615 0.00 0.00 38.07 2.24
3440 3994 6.183360 CGTTTGCCATAATTTAACGTCCTAGT 60.183 38.462 0.00 0.00 37.42 2.57
3441 3995 6.036300 TCGTTTGCCATAATTTAACGTCCTAG 59.964 38.462 0.00 0.00 41.48 3.02
3442 3996 5.873712 TCGTTTGCCATAATTTAACGTCCTA 59.126 36.000 0.00 0.00 41.48 2.94
3443 3997 4.696402 TCGTTTGCCATAATTTAACGTCCT 59.304 37.500 0.00 0.00 41.48 3.85
3444 3998 4.789629 GTCGTTTGCCATAATTTAACGTCC 59.210 41.667 0.00 0.00 41.48 4.79
3445 3999 4.489493 CGTCGTTTGCCATAATTTAACGTC 59.511 41.667 0.00 0.00 41.48 4.34
3446 4000 4.152045 TCGTCGTTTGCCATAATTTAACGT 59.848 37.500 0.00 0.00 41.48 3.99
3447 4001 4.489493 GTCGTCGTTTGCCATAATTTAACG 59.511 41.667 0.00 0.00 41.95 3.18
3448 4002 4.789629 GGTCGTCGTTTGCCATAATTTAAC 59.210 41.667 0.00 0.00 0.00 2.01
3449 4003 4.696402 AGGTCGTCGTTTGCCATAATTTAA 59.304 37.500 0.00 0.00 0.00 1.52
3450 4004 4.255301 AGGTCGTCGTTTGCCATAATTTA 58.745 39.130 0.00 0.00 0.00 1.40
3451 4005 3.078837 AGGTCGTCGTTTGCCATAATTT 58.921 40.909 0.00 0.00 0.00 1.82
3452 4006 2.706890 AGGTCGTCGTTTGCCATAATT 58.293 42.857 0.00 0.00 0.00 1.40
3453 4007 2.396590 AGGTCGTCGTTTGCCATAAT 57.603 45.000 0.00 0.00 0.00 1.28
3454 4008 2.883574 CTAGGTCGTCGTTTGCCATAA 58.116 47.619 0.00 0.00 0.00 1.90
3455 4009 1.470285 GCTAGGTCGTCGTTTGCCATA 60.470 52.381 0.00 0.00 0.00 2.74
3456 4010 0.739813 GCTAGGTCGTCGTTTGCCAT 60.740 55.000 0.00 0.00 0.00 4.40
3457 4011 1.373748 GCTAGGTCGTCGTTTGCCA 60.374 57.895 0.00 0.00 0.00 4.92
3458 4012 0.739813 ATGCTAGGTCGTCGTTTGCC 60.740 55.000 0.00 0.00 0.00 4.52
3459 4013 0.370273 CATGCTAGGTCGTCGTTTGC 59.630 55.000 0.00 0.00 0.00 3.68
3460 4014 0.370273 GCATGCTAGGTCGTCGTTTG 59.630 55.000 11.37 0.00 0.00 2.93
3461 4015 1.076533 CGCATGCTAGGTCGTCGTTT 61.077 55.000 17.13 0.00 0.00 3.60
3462 4016 1.516386 CGCATGCTAGGTCGTCGTT 60.516 57.895 17.13 0.00 0.00 3.85
3463 4017 2.102357 CGCATGCTAGGTCGTCGT 59.898 61.111 17.13 0.00 0.00 4.34
3464 4018 2.102357 ACGCATGCTAGGTCGTCG 59.898 61.111 17.13 0.00 0.00 5.12
3465 4019 1.878522 CCACGCATGCTAGGTCGTC 60.879 63.158 17.13 0.00 32.38 4.20
3466 4020 2.184322 CCACGCATGCTAGGTCGT 59.816 61.111 17.13 1.52 35.35 4.34
3467 4021 3.264897 GCCACGCATGCTAGGTCG 61.265 66.667 21.65 6.78 0.00 4.79
3468 4022 2.897350 GGCCACGCATGCTAGGTC 60.897 66.667 21.65 17.73 0.00 3.85
3469 4023 4.838152 CGGCCACGCATGCTAGGT 62.838 66.667 21.65 8.73 0.00 3.08
3508 4062 1.519455 GCTGGAAGGACGATGACGG 60.519 63.158 0.00 0.00 44.46 4.79
3509 4063 1.874019 CGCTGGAAGGACGATGACG 60.874 63.158 0.00 0.00 45.75 4.35
3510 4064 1.078759 CACGCTGGAAGGACGATGAC 61.079 60.000 0.00 0.00 0.00 3.06
3511 4065 1.215382 CACGCTGGAAGGACGATGA 59.785 57.895 0.00 0.00 0.00 2.92
3512 4066 1.811266 CCACGCTGGAAGGACGATG 60.811 63.158 0.00 0.00 40.96 3.84
3513 4067 1.982395 TCCACGCTGGAAGGACGAT 60.982 57.895 4.51 0.00 45.00 3.73
3514 4068 2.599281 TCCACGCTGGAAGGACGA 60.599 61.111 4.51 0.00 45.00 4.20
3527 4081 4.754667 GTCCCCGCGTCCTTCCAC 62.755 72.222 4.92 0.00 0.00 4.02
3529 4083 4.754667 GTGTCCCCGCGTCCTTCC 62.755 72.222 4.92 0.00 0.00 3.46
3549 4103 2.012673 GGTGATAGTCAAGCAAGGCTG 58.987 52.381 0.00 0.00 39.62 4.85
3550 4104 1.406069 CGGTGATAGTCAAGCAAGGCT 60.406 52.381 0.00 0.00 42.56 4.58
3551 4105 1.009829 CGGTGATAGTCAAGCAAGGC 58.990 55.000 0.00 0.00 0.00 4.35
3552 4106 1.009829 GCGGTGATAGTCAAGCAAGG 58.990 55.000 0.00 0.00 34.06 3.61
3553 4107 1.009829 GGCGGTGATAGTCAAGCAAG 58.990 55.000 9.69 0.00 35.08 4.01
3554 4108 0.613260 AGGCGGTGATAGTCAAGCAA 59.387 50.000 9.69 0.00 35.08 3.91
3555 4109 0.108186 CAGGCGGTGATAGTCAAGCA 60.108 55.000 9.69 0.00 35.08 3.91
3556 4110 0.175760 TCAGGCGGTGATAGTCAAGC 59.824 55.000 0.00 1.56 33.42 4.01
3557 4111 1.799181 CGTCAGGCGGTGATAGTCAAG 60.799 57.143 0.00 0.00 37.56 3.02
3558 4112 0.172578 CGTCAGGCGGTGATAGTCAA 59.827 55.000 0.00 0.00 37.56 3.18
3559 4113 1.807226 CGTCAGGCGGTGATAGTCA 59.193 57.895 0.00 0.00 37.56 3.41
3560 4114 1.589196 GCGTCAGGCGGTGATAGTC 60.589 63.158 0.00 0.00 41.69 2.59
3561 4115 2.494918 GCGTCAGGCGGTGATAGT 59.505 61.111 0.00 0.00 41.69 2.12
3570 4124 1.227674 CCCCTCATTAGCGTCAGGC 60.228 63.158 0.00 0.00 44.05 4.85
3571 4125 1.338136 ACCCCCTCATTAGCGTCAGG 61.338 60.000 0.00 0.00 0.00 3.86
3572 4126 0.541863 AACCCCCTCATTAGCGTCAG 59.458 55.000 0.00 0.00 0.00 3.51
3573 4127 0.251916 CAACCCCCTCATTAGCGTCA 59.748 55.000 0.00 0.00 0.00 4.35
3574 4128 0.252197 ACAACCCCCTCATTAGCGTC 59.748 55.000 0.00 0.00 0.00 5.19
3575 4129 0.696501 AACAACCCCCTCATTAGCGT 59.303 50.000 0.00 0.00 0.00 5.07
3576 4130 1.379527 GAACAACCCCCTCATTAGCG 58.620 55.000 0.00 0.00 0.00 4.26
3577 4131 1.763968 GGAACAACCCCCTCATTAGC 58.236 55.000 0.00 0.00 0.00 3.09
3578 4132 2.017113 GCGGAACAACCCCCTCATTAG 61.017 57.143 0.00 0.00 34.64 1.73
3579 4133 0.034863 GCGGAACAACCCCCTCATTA 60.035 55.000 0.00 0.00 34.64 1.90
3580 4134 1.304134 GCGGAACAACCCCCTCATT 60.304 57.895 0.00 0.00 34.64 2.57
3581 4135 1.789576 AAGCGGAACAACCCCCTCAT 61.790 55.000 0.00 0.00 34.64 2.90
3582 4136 2.406002 GAAGCGGAACAACCCCCTCA 62.406 60.000 0.00 0.00 34.64 3.86
3583 4137 1.674651 GAAGCGGAACAACCCCCTC 60.675 63.158 0.00 0.00 34.64 4.30
3584 4138 1.716028 AAGAAGCGGAACAACCCCCT 61.716 55.000 0.00 0.00 34.64 4.79
3585 4139 1.228459 AAGAAGCGGAACAACCCCC 60.228 57.895 0.00 0.00 34.64 5.40
3586 4140 1.241990 GGAAGAAGCGGAACAACCCC 61.242 60.000 0.00 0.00 34.64 4.95
3587 4141 0.250770 AGGAAGAAGCGGAACAACCC 60.251 55.000 0.00 0.00 34.64 4.11
3588 4142 0.875059 CAGGAAGAAGCGGAACAACC 59.125 55.000 0.00 0.00 0.00 3.77
3589 4143 0.238553 GCAGGAAGAAGCGGAACAAC 59.761 55.000 0.00 0.00 0.00 3.32
3590 4144 2.629002 GCAGGAAGAAGCGGAACAA 58.371 52.632 0.00 0.00 0.00 2.83
3591 4145 4.379174 GCAGGAAGAAGCGGAACA 57.621 55.556 0.00 0.00 0.00 3.18
3597 4151 3.016474 GCACGACGCAGGAAGAAGC 62.016 63.158 0.00 0.00 41.79 3.86
3598 4152 3.159984 GCACGACGCAGGAAGAAG 58.840 61.111 0.00 0.00 41.79 2.85
3615 4169 2.859273 ATTGTCGAAGCGGCCCTCTG 62.859 60.000 0.00 0.00 0.00 3.35
3616 4170 2.660064 ATTGTCGAAGCGGCCCTCT 61.660 57.895 0.00 0.00 0.00 3.69
3617 4171 2.125106 ATTGTCGAAGCGGCCCTC 60.125 61.111 0.00 0.00 0.00 4.30
3618 4172 2.436646 CATTGTCGAAGCGGCCCT 60.437 61.111 0.00 0.00 0.00 5.19
3619 4173 2.332654 AACATTGTCGAAGCGGCCC 61.333 57.895 0.00 0.00 0.00 5.80
3620 4174 1.154225 CAACATTGTCGAAGCGGCC 60.154 57.895 0.00 0.00 0.00 6.13
3621 4175 1.154225 CCAACATTGTCGAAGCGGC 60.154 57.895 0.00 0.00 0.00 6.53
3622 4176 1.154225 GCCAACATTGTCGAAGCGG 60.154 57.895 0.00 0.00 0.00 5.52
3623 4177 1.154225 GGCCAACATTGTCGAAGCG 60.154 57.895 0.00 0.00 0.00 4.68
3624 4178 1.212751 GGGCCAACATTGTCGAAGC 59.787 57.895 4.39 0.00 0.00 3.86
3625 4179 1.883021 GGGGCCAACATTGTCGAAG 59.117 57.895 4.39 0.00 0.00 3.79
3626 4180 1.969064 CGGGGCCAACATTGTCGAA 60.969 57.895 4.39 0.00 0.00 3.71
3627 4181 2.191786 ATCGGGGCCAACATTGTCGA 62.192 55.000 4.39 2.26 0.00 4.20
3628 4182 1.714899 GATCGGGGCCAACATTGTCG 61.715 60.000 4.39 0.00 0.00 4.35
3629 4183 1.714899 CGATCGGGGCCAACATTGTC 61.715 60.000 7.38 0.00 0.00 3.18
3630 4184 1.748879 CGATCGGGGCCAACATTGT 60.749 57.895 7.38 0.00 0.00 2.71
3631 4185 3.110139 CGATCGGGGCCAACATTG 58.890 61.111 7.38 0.00 0.00 2.82
3632 4186 2.828549 GCGATCGGGGCCAACATT 60.829 61.111 18.30 0.00 0.00 2.71
3670 4224 1.539280 GGAGAGGAATGGTCGCTAAGC 60.539 57.143 0.00 0.00 0.00 3.09
3671 4225 1.757118 TGGAGAGGAATGGTCGCTAAG 59.243 52.381 0.00 0.00 0.00 2.18
3672 4226 1.860641 TGGAGAGGAATGGTCGCTAA 58.139 50.000 0.00 0.00 0.00 3.09
3673 4227 1.480954 GTTGGAGAGGAATGGTCGCTA 59.519 52.381 0.00 0.00 0.00 4.26
3674 4228 0.250513 GTTGGAGAGGAATGGTCGCT 59.749 55.000 0.00 0.00 0.00 4.93
3675 4229 0.744771 GGTTGGAGAGGAATGGTCGC 60.745 60.000 0.00 0.00 0.00 5.19
3676 4230 0.905357 AGGTTGGAGAGGAATGGTCG 59.095 55.000 0.00 0.00 0.00 4.79
3677 4231 2.716217 CAAGGTTGGAGAGGAATGGTC 58.284 52.381 0.00 0.00 0.00 4.02
3678 4232 2.887151 CAAGGTTGGAGAGGAATGGT 57.113 50.000 0.00 0.00 0.00 3.55
3690 4244 0.539438 TGGGTAGCTTGCCAAGGTTG 60.539 55.000 15.12 0.00 40.27 3.77
3691 4245 0.409484 ATGGGTAGCTTGCCAAGGTT 59.591 50.000 15.12 0.00 40.27 3.50
3692 4246 0.034089 GATGGGTAGCTTGCCAAGGT 60.034 55.000 14.30 14.30 42.74 3.50
3693 4247 0.034186 TGATGGGTAGCTTGCCAAGG 60.034 55.000 6.57 0.00 0.00 3.61
3694 4248 1.747355 CTTGATGGGTAGCTTGCCAAG 59.253 52.381 0.00 0.00 0.00 3.61
3695 4249 1.616725 CCTTGATGGGTAGCTTGCCAA 60.617 52.381 8.92 0.00 0.00 4.52
3696 4250 0.034186 CCTTGATGGGTAGCTTGCCA 60.034 55.000 8.92 0.00 0.00 4.92
3697 4251 0.034089 ACCTTGATGGGTAGCTTGCC 60.034 55.000 0.00 0.00 41.11 4.52
3698 4252 1.098050 CACCTTGATGGGTAGCTTGC 58.902 55.000 0.00 0.00 41.11 4.01
3699 4253 1.755179 CCACCTTGATGGGTAGCTTG 58.245 55.000 0.00 0.00 41.11 4.01
3700 4254 0.034089 GCCACCTTGATGGGTAGCTT 60.034 55.000 0.00 0.00 40.06 3.74
3701 4255 1.609783 GCCACCTTGATGGGTAGCT 59.390 57.895 0.00 0.00 40.06 3.32
3702 4256 1.819632 CGCCACCTTGATGGGTAGC 60.820 63.158 0.00 0.00 40.43 3.58
3703 4257 1.153168 CCGCCACCTTGATGGGTAG 60.153 63.158 0.00 0.00 40.43 3.18
3704 4258 2.994699 CCGCCACCTTGATGGGTA 59.005 61.111 0.00 0.00 40.43 3.69
3705 4259 4.740822 GCCGCCACCTTGATGGGT 62.741 66.667 0.00 0.00 40.43 4.51
3723 4277 4.148825 AGATGGACGAGCGGTGGC 62.149 66.667 0.00 0.00 40.37 5.01
3724 4278 2.105128 GAGATGGACGAGCGGTGG 59.895 66.667 0.00 0.00 0.00 4.61
3725 4279 2.021068 ATGGAGATGGACGAGCGGTG 62.021 60.000 0.00 0.00 0.00 4.94
3726 4280 1.758514 ATGGAGATGGACGAGCGGT 60.759 57.895 0.00 0.00 0.00 5.68
3727 4281 1.300465 CATGGAGATGGACGAGCGG 60.300 63.158 0.00 0.00 0.00 5.52
3728 4282 4.333095 CATGGAGATGGACGAGCG 57.667 61.111 0.00 0.00 0.00 5.03
3736 4290 1.556451 TCTGTCACCACCATGGAGATG 59.444 52.381 21.47 8.28 40.96 2.90
3737 4291 1.836166 CTCTGTCACCACCATGGAGAT 59.164 52.381 21.47 0.00 40.96 2.75
3738 4292 1.269958 CTCTGTCACCACCATGGAGA 58.730 55.000 21.47 7.86 40.96 3.71
3739 4293 3.849002 CTCTGTCACCACCATGGAG 57.151 57.895 21.47 11.19 40.96 3.86


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.