Multiple sequence alignment - TraesCS5B01G305500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G305500 chr5B 100.000 3512 0 0 1 3512 489521769 489525280 0.000000e+00 6486.0
1 TraesCS5B01G305500 chr5B 94.771 765 40 0 1764 2528 489575137 489575901 0.000000e+00 1192.0
2 TraesCS5B01G305500 chr5B 87.647 850 75 10 876 1704 489574269 489575109 0.000000e+00 961.0
3 TraesCS5B01G305500 chr5B 84.571 687 101 5 1764 2446 489313170 489312485 0.000000e+00 676.0
4 TraesCS5B01G305500 chr5B 90.278 432 36 4 2539 2968 596440770 596440343 8.510000e-156 560.0
5 TraesCS5B01G305500 chr5D 92.642 1658 105 7 874 2527 408218901 408220545 0.000000e+00 2370.0
6 TraesCS5B01G305500 chr5D 85.298 687 96 5 1764 2446 407988379 407987694 0.000000e+00 704.0
7 TraesCS5B01G305500 chr5D 87.273 275 19 5 212 471 408217282 408217555 2.050000e-77 300.0
8 TraesCS5B01G305500 chr5A 91.198 1670 116 20 876 2528 514003060 514004715 0.000000e+00 2241.0
9 TraesCS5B01G305500 chr5A 84.716 687 100 5 1764 2446 513869855 513869170 0.000000e+00 682.0
10 TraesCS5B01G305500 chr5A 84.058 276 16 14 214 471 514001719 514001984 1.260000e-59 241.0
11 TraesCS5B01G305500 chr5A 86.364 88 4 3 774 853 514002026 514002113 4.830000e-14 89.8
12 TraesCS5B01G305500 chr3B 90.476 966 65 10 2545 3507 133827157 133826216 0.000000e+00 1249.0
13 TraesCS5B01G305500 chr3B 89.083 971 52 16 2536 3502 7177452 7178372 0.000000e+00 1157.0
14 TraesCS5B01G305500 chr3B 92.424 198 15 0 1 198 246488746 246488549 2.060000e-72 283.0
15 TraesCS5B01G305500 chr3B 92.670 191 14 0 5 195 31547660 31547850 3.450000e-70 276.0
16 TraesCS5B01G305500 chr4D 89.260 987 75 14 2528 3501 384958669 384957701 0.000000e+00 1206.0
17 TraesCS5B01G305500 chr2A 89.165 683 49 17 2826 3502 72214971 72214308 0.000000e+00 828.0
18 TraesCS5B01G305500 chr2A 90.972 432 34 3 2538 2968 691532882 691532455 8.450000e-161 577.0
19 TraesCS5B01G305500 chr2A 86.261 444 35 13 3057 3499 691532455 691532037 3.190000e-125 459.0
20 TraesCS5B01G305500 chr2D 80.546 915 117 26 2537 3450 577725044 577724190 0.000000e+00 647.0
21 TraesCS5B01G305500 chr1D 92.593 432 27 3 2538 2968 12203795 12203368 1.790000e-172 616.0
22 TraesCS5B01G305500 chr1D 88.312 385 33 8 3057 3439 12203368 12202994 5.350000e-123 451.0
23 TraesCS5B01G305500 chr6A 90.736 421 35 2 2536 2956 35564952 35565368 3.060000e-155 558.0
24 TraesCS5B01G305500 chr6A 87.736 424 46 4 2543 2965 159187646 159188064 1.130000e-134 490.0
25 TraesCS5B01G305500 chr6A 86.547 446 48 6 3057 3501 159188067 159188501 6.820000e-132 481.0
26 TraesCS5B01G305500 chr6A 90.299 268 20 4 3242 3509 35565516 35565777 2.600000e-91 346.0
27 TraesCS5B01G305500 chr6A 90.517 116 7 2 3057 3172 35565380 35565491 2.180000e-32 150.0
28 TraesCS5B01G305500 chr4A 91.906 383 26 3 2538 2919 654842933 654843311 6.670000e-147 531.0
29 TraesCS5B01G305500 chr4A 84.459 444 34 15 3057 3499 654843338 654843747 4.220000e-109 405.0
30 TraesCS5B01G305500 chr4A 91.542 201 16 1 1 200 676491274 676491474 3.450000e-70 276.0
31 TraesCS5B01G305500 chr7A 90.633 395 32 3 2574 2967 16293493 16293883 1.440000e-143 520.0
32 TraesCS5B01G305500 chr7A 90.594 202 19 0 1 202 728528183 728527982 5.780000e-68 268.0
33 TraesCS5B01G305500 chr7A 83.099 142 16 8 2111 2248 543432123 543432260 4.760000e-24 122.0
34 TraesCS5B01G305500 chr6D 87.557 442 39 8 3057 3496 436243321 436242894 6.770000e-137 497.0
35 TraesCS5B01G305500 chr1B 93.035 201 14 0 1 201 667544414 667544214 9.530000e-76 294.0
36 TraesCS5B01G305500 chr1B 90.196 204 20 0 1 204 562396933 562396730 2.080000e-67 267.0
37 TraesCS5B01G305500 chr1B 78.534 191 31 10 2073 2258 630466460 630466275 2.210000e-22 117.0
38 TraesCS5B01G305500 chr4B 91.626 203 15 1 1 201 621033666 621033868 2.670000e-71 279.0
39 TraesCS5B01G305500 chr2B 91.542 201 17 0 1 201 493245297 493245097 9.600000e-71 278.0
40 TraesCS5B01G305500 chr2B 92.268 194 15 0 2 195 118821526 118821333 3.450000e-70 276.0
41 TraesCS5B01G305500 chr7B 87.736 212 20 3 3057 3266 721222385 721222178 3.500000e-60 243.0
42 TraesCS5B01G305500 chr1A 84.677 124 15 4 2137 2258 551156450 551156329 1.710000e-23 121.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G305500 chr5B 489521769 489525280 3511 False 6486.000000 6486 100.000000 1 3512 1 chr5B.!!$F1 3511
1 TraesCS5B01G305500 chr5B 489574269 489575901 1632 False 1076.500000 1192 91.209000 876 2528 2 chr5B.!!$F2 1652
2 TraesCS5B01G305500 chr5B 489312485 489313170 685 True 676.000000 676 84.571000 1764 2446 1 chr5B.!!$R1 682
3 TraesCS5B01G305500 chr5D 408217282 408220545 3263 False 1335.000000 2370 89.957500 212 2527 2 chr5D.!!$F1 2315
4 TraesCS5B01G305500 chr5D 407987694 407988379 685 True 704.000000 704 85.298000 1764 2446 1 chr5D.!!$R1 682
5 TraesCS5B01G305500 chr5A 514001719 514004715 2996 False 857.266667 2241 87.206667 214 2528 3 chr5A.!!$F1 2314
6 TraesCS5B01G305500 chr5A 513869170 513869855 685 True 682.000000 682 84.716000 1764 2446 1 chr5A.!!$R1 682
7 TraesCS5B01G305500 chr3B 133826216 133827157 941 True 1249.000000 1249 90.476000 2545 3507 1 chr3B.!!$R1 962
8 TraesCS5B01G305500 chr3B 7177452 7178372 920 False 1157.000000 1157 89.083000 2536 3502 1 chr3B.!!$F1 966
9 TraesCS5B01G305500 chr4D 384957701 384958669 968 True 1206.000000 1206 89.260000 2528 3501 1 chr4D.!!$R1 973
10 TraesCS5B01G305500 chr2A 72214308 72214971 663 True 828.000000 828 89.165000 2826 3502 1 chr2A.!!$R1 676
11 TraesCS5B01G305500 chr2A 691532037 691532882 845 True 518.000000 577 88.616500 2538 3499 2 chr2A.!!$R2 961
12 TraesCS5B01G305500 chr2D 577724190 577725044 854 True 647.000000 647 80.546000 2537 3450 1 chr2D.!!$R1 913
13 TraesCS5B01G305500 chr1D 12202994 12203795 801 True 533.500000 616 90.452500 2538 3439 2 chr1D.!!$R1 901
14 TraesCS5B01G305500 chr6A 159187646 159188501 855 False 485.500000 490 87.141500 2543 3501 2 chr6A.!!$F2 958
15 TraesCS5B01G305500 chr6A 35564952 35565777 825 False 351.333333 558 90.517333 2536 3509 3 chr6A.!!$F1 973
16 TraesCS5B01G305500 chr4A 654842933 654843747 814 False 468.000000 531 88.182500 2538 3499 2 chr4A.!!$F2 961

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
802 823 0.030773 TCACGTGCATATCTCTCCGC 59.969 55.0 11.67 0.00 0.00 5.54 F
865 894 0.107800 AGCAGCTGCAGATCACGATT 60.108 50.0 38.24 12.75 45.16 3.34 F
869 898 0.376152 GCTGCAGATCACGATTGTGG 59.624 55.0 20.43 0.00 46.42 4.17 F
872 901 0.647410 GCAGATCACGATTGTGGACG 59.353 55.0 13.27 1.44 46.42 4.79 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2336 3793 0.107508 CATCACCTCCCTCACGCAAT 60.108 55.000 0.00 0.0 0.0 3.56 R
2383 3840 0.674534 GTCTTCACACTCCACTCCGT 59.325 55.000 0.00 0.0 0.0 4.69 R
2491 3948 0.752009 TACAGATCTTCCGCCGCTCT 60.752 55.000 0.00 0.0 0.0 4.09 R
2748 4206 2.898612 TCATTCATTTTGCAAGGCCAGA 59.101 40.909 5.01 0.0 0.0 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 4.477975 GTGCGACGGAGGGAGACG 62.478 72.222 0.00 0.00 0.00 4.18
43 44 4.123009 TCCGCGCGCTGACATGTA 62.123 61.111 30.48 1.84 0.00 2.29
44 45 2.961721 CCGCGCGCTGACATGTAT 60.962 61.111 30.48 0.00 0.00 2.29
45 46 1.660264 CCGCGCGCTGACATGTATA 60.660 57.895 30.48 0.00 0.00 1.47
46 47 1.212455 CCGCGCGCTGACATGTATAA 61.212 55.000 30.48 0.00 0.00 0.98
47 48 0.159554 CGCGCGCTGACATGTATAAG 59.840 55.000 30.48 4.24 0.00 1.73
48 49 1.209128 GCGCGCTGACATGTATAAGT 58.791 50.000 26.67 0.00 0.00 2.24
49 50 1.593006 GCGCGCTGACATGTATAAGTT 59.407 47.619 26.67 0.00 0.00 2.66
50 51 2.030457 GCGCGCTGACATGTATAAGTTT 59.970 45.455 26.67 0.00 0.00 2.66
51 52 3.841372 GCGCGCTGACATGTATAAGTTTC 60.841 47.826 26.67 0.00 0.00 2.78
52 53 3.302480 CGCGCTGACATGTATAAGTTTCC 60.302 47.826 5.56 0.00 0.00 3.13
53 54 3.871594 GCGCTGACATGTATAAGTTTCCT 59.128 43.478 0.00 0.00 0.00 3.36
54 55 5.047847 GCGCTGACATGTATAAGTTTCCTA 58.952 41.667 0.00 0.00 0.00 2.94
55 56 5.050972 GCGCTGACATGTATAAGTTTCCTAC 60.051 44.000 0.00 0.00 0.00 3.18
56 57 5.462398 CGCTGACATGTATAAGTTTCCTACC 59.538 44.000 0.00 0.00 0.00 3.18
57 58 5.462398 GCTGACATGTATAAGTTTCCTACCG 59.538 44.000 0.00 0.00 0.00 4.02
58 59 5.353938 TGACATGTATAAGTTTCCTACCGC 58.646 41.667 0.00 0.00 0.00 5.68
59 60 4.700700 ACATGTATAAGTTTCCTACCGCC 58.299 43.478 0.00 0.00 0.00 6.13
60 61 4.407945 ACATGTATAAGTTTCCTACCGCCT 59.592 41.667 0.00 0.00 0.00 5.52
61 62 5.104652 ACATGTATAAGTTTCCTACCGCCTT 60.105 40.000 0.00 0.00 0.00 4.35
62 63 4.761975 TGTATAAGTTTCCTACCGCCTTG 58.238 43.478 0.00 0.00 0.00 3.61
63 64 2.773993 TAAGTTTCCTACCGCCTTGG 57.226 50.000 0.00 0.00 46.41 3.61
64 65 0.037734 AAGTTTCCTACCGCCTTGGG 59.962 55.000 0.00 0.00 44.64 4.12
65 66 2.044555 GTTTCCTACCGCCTTGGGC 61.045 63.158 0.00 0.00 46.75 5.36
82 83 2.338984 CCGTGGCGGTAGGCTATC 59.661 66.667 0.00 0.00 42.73 2.08
83 84 2.201022 CCGTGGCGGTAGGCTATCT 61.201 63.158 2.85 0.00 42.73 1.98
84 85 0.892358 CCGTGGCGGTAGGCTATCTA 60.892 60.000 2.85 0.00 42.73 1.98
85 86 0.956633 CGTGGCGGTAGGCTATCTAA 59.043 55.000 2.85 0.00 44.18 2.10
86 87 1.335689 CGTGGCGGTAGGCTATCTAAC 60.336 57.143 2.85 0.00 44.18 2.34
87 88 1.000618 GTGGCGGTAGGCTATCTAACC 59.999 57.143 2.85 2.59 44.18 2.85
88 89 0.607112 GGCGGTAGGCTATCTAACCC 59.393 60.000 2.85 0.00 42.94 4.11
89 90 1.630223 GCGGTAGGCTATCTAACCCT 58.370 55.000 2.85 0.00 39.11 4.34
90 91 2.556114 GGCGGTAGGCTATCTAACCCTA 60.556 54.545 2.85 0.00 42.94 3.53
91 92 2.491298 GCGGTAGGCTATCTAACCCTAC 59.509 54.545 2.85 7.39 46.60 3.18
94 95 1.630223 AGGCTATCTAACCCTACCGC 58.370 55.000 0.00 0.00 0.00 5.68
95 96 0.607112 GGCTATCTAACCCTACCGCC 59.393 60.000 0.00 0.00 0.00 6.13
96 97 1.335145 GCTATCTAACCCTACCGCCA 58.665 55.000 0.00 0.00 0.00 5.69
97 98 1.272769 GCTATCTAACCCTACCGCCAG 59.727 57.143 0.00 0.00 0.00 4.85
98 99 2.872732 CTATCTAACCCTACCGCCAGA 58.127 52.381 0.00 0.00 0.00 3.86
99 100 2.400467 ATCTAACCCTACCGCCAGAT 57.600 50.000 0.00 0.00 0.00 2.90
100 101 1.410004 TCTAACCCTACCGCCAGATG 58.590 55.000 0.00 0.00 0.00 2.90
101 102 0.249911 CTAACCCTACCGCCAGATGC 60.250 60.000 0.00 0.00 0.00 3.91
102 103 1.692173 TAACCCTACCGCCAGATGCC 61.692 60.000 0.00 0.00 36.24 4.40
103 104 4.256180 CCCTACCGCCAGATGCCC 62.256 72.222 0.00 0.00 36.24 5.36
104 105 3.164269 CCTACCGCCAGATGCCCT 61.164 66.667 0.00 0.00 36.24 5.19
105 106 2.109799 CTACCGCCAGATGCCCTG 59.890 66.667 0.00 0.00 42.55 4.45
112 113 2.109799 CAGATGCCCTGGCGGTAG 59.890 66.667 3.32 0.00 45.51 3.18
113 114 3.164269 AGATGCCCTGGCGGTAGG 61.164 66.667 3.32 0.00 45.51 3.18
114 115 3.161450 GATGCCCTGGCGGTAGGA 61.161 66.667 3.32 0.00 45.51 2.94
115 116 3.462199 GATGCCCTGGCGGTAGGAC 62.462 68.421 3.32 0.00 45.51 3.85
117 118 3.712907 GCCCTGGCGGTAGGACAA 61.713 66.667 0.00 0.00 40.42 3.18
118 119 3.074281 CCCTGGCGGTAGGACAAA 58.926 61.111 2.18 0.00 40.42 2.83
119 120 1.078426 CCCTGGCGGTAGGACAAAG 60.078 63.158 2.18 0.00 40.42 2.77
120 121 1.078426 CCTGGCGGTAGGACAAAGG 60.078 63.158 0.00 0.00 40.42 3.11
121 122 1.078426 CTGGCGGTAGGACAAAGGG 60.078 63.158 0.00 0.00 28.86 3.95
122 123 1.838073 CTGGCGGTAGGACAAAGGGT 61.838 60.000 0.00 0.00 28.86 4.34
123 124 1.377612 GGCGGTAGGACAAAGGGTT 59.622 57.895 0.00 0.00 0.00 4.11
124 125 0.614812 GGCGGTAGGACAAAGGGTTA 59.385 55.000 0.00 0.00 0.00 2.85
125 126 1.003464 GGCGGTAGGACAAAGGGTTAA 59.997 52.381 0.00 0.00 0.00 2.01
126 127 2.552809 GGCGGTAGGACAAAGGGTTAAA 60.553 50.000 0.00 0.00 0.00 1.52
127 128 3.349927 GCGGTAGGACAAAGGGTTAAAT 58.650 45.455 0.00 0.00 0.00 1.40
128 129 3.376234 GCGGTAGGACAAAGGGTTAAATC 59.624 47.826 0.00 0.00 0.00 2.17
129 130 3.619929 CGGTAGGACAAAGGGTTAAATCG 59.380 47.826 0.00 0.00 0.00 3.34
130 131 3.376234 GGTAGGACAAAGGGTTAAATCGC 59.624 47.826 0.00 0.00 0.00 4.58
131 132 2.081462 AGGACAAAGGGTTAAATCGCG 58.919 47.619 0.00 0.00 0.00 5.87
132 133 2.078392 GGACAAAGGGTTAAATCGCGA 58.922 47.619 13.09 13.09 0.00 5.87
133 134 2.485038 GGACAAAGGGTTAAATCGCGAA 59.515 45.455 15.24 0.00 0.00 4.70
134 135 3.058085 GGACAAAGGGTTAAATCGCGAAA 60.058 43.478 15.24 0.00 0.00 3.46
135 136 4.538917 GACAAAGGGTTAAATCGCGAAAA 58.461 39.130 15.24 5.23 0.00 2.29
136 137 4.934515 ACAAAGGGTTAAATCGCGAAAAA 58.065 34.783 15.24 4.81 0.00 1.94
160 161 9.485206 AAAATTTCAAACAGGAATCAGATCTTG 57.515 29.630 0.00 0.00 33.04 3.02
161 162 8.413309 AATTTCAAACAGGAATCAGATCTTGA 57.587 30.769 0.00 0.00 40.85 3.02
162 163 7.822161 TTTCAAACAGGAATCAGATCTTGAA 57.178 32.000 0.00 0.00 39.77 2.69
163 164 7.822161 TTCAAACAGGAATCAGATCTTGAAA 57.178 32.000 0.00 0.00 39.77 2.69
164 165 8.413309 TTCAAACAGGAATCAGATCTTGAAAT 57.587 30.769 0.00 0.00 39.77 2.17
165 166 8.413309 TCAAACAGGAATCAGATCTTGAAATT 57.587 30.769 0.00 0.00 39.77 1.82
166 167 8.517878 TCAAACAGGAATCAGATCTTGAAATTC 58.482 33.333 0.00 0.73 39.77 2.17
167 168 8.521176 CAAACAGGAATCAGATCTTGAAATTCT 58.479 33.333 0.00 0.00 39.77 2.40
168 169 8.647256 AACAGGAATCAGATCTTGAAATTCTT 57.353 30.769 0.00 0.00 39.77 2.52
169 170 8.647256 ACAGGAATCAGATCTTGAAATTCTTT 57.353 30.769 0.00 0.00 39.77 2.52
170 171 8.738106 ACAGGAATCAGATCTTGAAATTCTTTC 58.262 33.333 0.00 0.00 39.77 2.62
171 172 8.189460 CAGGAATCAGATCTTGAAATTCTTTCC 58.811 37.037 0.00 4.14 39.77 3.13
172 173 7.892241 AGGAATCAGATCTTGAAATTCTTTCCA 59.108 33.333 16.60 0.00 38.83 3.53
173 174 8.526147 GGAATCAGATCTTGAAATTCTTTCCAA 58.474 33.333 0.00 0.00 39.77 3.53
174 175 9.918630 GAATCAGATCTTGAAATTCTTTCCAAA 57.081 29.630 0.00 0.00 39.77 3.28
177 178 9.754382 TCAGATCTTGAAATTCTTTCCAAAAAG 57.246 29.630 0.00 0.00 38.90 2.27
178 179 8.985805 CAGATCTTGAAATTCTTTCCAAAAAGG 58.014 33.333 0.00 0.00 41.88 3.11
179 180 8.152898 AGATCTTGAAATTCTTTCCAAAAAGGG 58.847 33.333 0.00 0.00 41.88 3.95
180 181 7.194112 TCTTGAAATTCTTTCCAAAAAGGGT 57.806 32.000 0.00 0.00 41.88 4.34
181 182 7.272244 TCTTGAAATTCTTTCCAAAAAGGGTC 58.728 34.615 0.00 0.00 41.88 4.46
182 183 6.552445 TGAAATTCTTTCCAAAAAGGGTCA 57.448 33.333 0.00 0.00 41.88 4.02
183 184 6.951971 TGAAATTCTTTCCAAAAAGGGTCAA 58.048 32.000 0.00 0.00 41.88 3.18
184 185 7.398024 TGAAATTCTTTCCAAAAAGGGTCAAA 58.602 30.769 0.00 0.00 41.88 2.69
185 186 7.885399 TGAAATTCTTTCCAAAAAGGGTCAAAA 59.115 29.630 0.00 0.00 41.88 2.44
186 187 7.624360 AATTCTTTCCAAAAAGGGTCAAAAC 57.376 32.000 0.00 0.00 41.88 2.43
187 188 5.746990 TCTTTCCAAAAAGGGTCAAAACA 57.253 34.783 0.00 0.00 41.88 2.83
188 189 6.306643 TCTTTCCAAAAAGGGTCAAAACAT 57.693 33.333 0.00 0.00 41.88 2.71
189 190 6.112058 TCTTTCCAAAAAGGGTCAAAACATG 58.888 36.000 0.00 0.00 41.88 3.21
190 191 5.683876 TTCCAAAAAGGGTCAAAACATGA 57.316 34.783 0.00 0.00 38.24 3.07
191 192 5.683876 TCCAAAAAGGGTCAAAACATGAA 57.316 34.783 0.00 0.00 36.42 2.57
192 193 6.054860 TCCAAAAAGGGTCAAAACATGAAA 57.945 33.333 0.00 0.00 36.42 2.69
193 194 6.657875 TCCAAAAAGGGTCAAAACATGAAAT 58.342 32.000 0.00 0.00 36.42 2.17
194 195 7.115414 TCCAAAAAGGGTCAAAACATGAAATT 58.885 30.769 0.00 0.00 36.42 1.82
195 196 7.281999 TCCAAAAAGGGTCAAAACATGAAATTC 59.718 33.333 0.00 0.00 36.42 2.17
196 197 6.843069 AAAAGGGTCAAAACATGAAATTCG 57.157 33.333 0.00 0.00 40.50 3.34
197 198 4.519540 AGGGTCAAAACATGAAATTCGG 57.480 40.909 0.00 0.00 40.50 4.30
198 199 2.993220 GGGTCAAAACATGAAATTCGGC 59.007 45.455 0.00 0.00 40.50 5.54
199 200 2.993220 GGTCAAAACATGAAATTCGGCC 59.007 45.455 0.00 0.00 40.50 6.13
200 201 2.661195 GTCAAAACATGAAATTCGGCCG 59.339 45.455 22.12 22.12 40.50 6.13
201 202 1.991965 CAAAACATGAAATTCGGCCGG 59.008 47.619 27.83 8.96 0.00 6.13
202 203 1.540267 AAACATGAAATTCGGCCGGA 58.460 45.000 27.83 20.01 0.00 5.14
203 204 1.540267 AACATGAAATTCGGCCGGAA 58.460 45.000 27.83 18.43 39.42 4.30
204 205 1.540267 ACATGAAATTCGGCCGGAAA 58.460 45.000 27.83 14.28 38.36 3.13
205 206 1.889829 ACATGAAATTCGGCCGGAAAA 59.110 42.857 27.83 13.42 38.36 2.29
206 207 2.258755 CATGAAATTCGGCCGGAAAAC 58.741 47.619 27.83 14.81 38.36 2.43
207 208 0.599060 TGAAATTCGGCCGGAAAACC 59.401 50.000 27.83 11.14 38.36 3.27
208 209 0.599060 GAAATTCGGCCGGAAAACCA 59.401 50.000 27.83 0.00 38.36 3.67
209 210 0.315886 AAATTCGGCCGGAAAACCAC 59.684 50.000 27.83 0.00 38.36 4.16
210 211 1.858372 AATTCGGCCGGAAAACCACG 61.858 55.000 27.83 0.00 38.36 4.94
261 262 2.596851 GGCTGAGACCCTGGCTGAA 61.597 63.158 0.00 0.00 36.55 3.02
262 263 1.376466 GCTGAGACCCTGGCTGAAA 59.624 57.895 0.00 0.00 0.00 2.69
271 272 0.036388 CCTGGCTGAAAAGCTACCGA 60.036 55.000 0.00 0.00 34.73 4.69
303 314 2.634815 ACATCTAGCTGCTTCATGGG 57.365 50.000 7.79 0.00 0.00 4.00
328 340 2.798148 AAGATTGGGACGTGGACCGC 62.798 60.000 0.00 0.00 41.42 5.68
358 371 7.530190 CACAGATTTGTTGTTTGTGTTTGTTTC 59.470 33.333 0.00 0.00 34.62 2.78
359 372 6.731505 CAGATTTGTTGTTTGTGTTTGTTTCG 59.268 34.615 0.00 0.00 0.00 3.46
360 373 4.974103 TTGTTGTTTGTGTTTGTTTCGG 57.026 36.364 0.00 0.00 0.00 4.30
399 416 3.782369 CGATGACGATTGAGCAACAAATG 59.218 43.478 0.00 0.33 42.03 2.32
435 452 2.027024 GCGTGCATGCATGGGATG 59.973 61.111 34.64 14.81 33.81 3.51
456 477 1.075600 AGGAGCCTACCTCTGAGCC 60.076 63.158 0.00 0.00 40.57 4.70
467 488 1.834856 CTCTGAGCCCTTGACCAGCA 61.835 60.000 0.00 0.00 0.00 4.41
468 489 1.203441 TCTGAGCCCTTGACCAGCAT 61.203 55.000 0.00 0.00 0.00 3.79
469 490 0.747283 CTGAGCCCTTGACCAGCATC 60.747 60.000 0.00 0.00 0.00 3.91
470 491 1.817099 GAGCCCTTGACCAGCATCG 60.817 63.158 0.00 0.00 0.00 3.84
471 492 2.045926 GCCCTTGACCAGCATCGT 60.046 61.111 0.00 0.00 0.00 3.73
472 493 2.109126 GCCCTTGACCAGCATCGTC 61.109 63.158 0.00 0.00 0.00 4.20
473 494 1.296392 CCCTTGACCAGCATCGTCA 59.704 57.895 0.00 0.00 38.46 4.35
474 495 1.021390 CCCTTGACCAGCATCGTCAC 61.021 60.000 0.54 0.00 39.89 3.67
475 496 0.036952 CCTTGACCAGCATCGTCACT 60.037 55.000 0.54 0.00 39.89 3.41
476 497 1.073964 CTTGACCAGCATCGTCACTG 58.926 55.000 0.54 0.00 39.89 3.66
479 500 2.267006 CCAGCATCGTCACTGGCT 59.733 61.111 7.28 0.00 46.50 4.75
480 501 1.517361 CCAGCATCGTCACTGGCTA 59.483 57.895 7.28 0.00 46.50 3.93
481 502 0.108186 CCAGCATCGTCACTGGCTAA 60.108 55.000 7.28 0.00 46.50 3.09
482 503 1.002366 CAGCATCGTCACTGGCTAAC 58.998 55.000 0.00 0.00 34.25 2.34
483 504 0.898320 AGCATCGTCACTGGCTAACT 59.102 50.000 0.00 0.00 34.25 2.24
484 505 2.100197 AGCATCGTCACTGGCTAACTA 58.900 47.619 0.00 0.00 34.25 2.24
485 506 2.159226 AGCATCGTCACTGGCTAACTAC 60.159 50.000 0.00 0.00 34.25 2.73
486 507 2.159226 GCATCGTCACTGGCTAACTACT 60.159 50.000 0.00 0.00 0.00 2.57
487 508 3.439293 CATCGTCACTGGCTAACTACTG 58.561 50.000 0.00 0.00 0.00 2.74
488 509 1.201647 TCGTCACTGGCTAACTACTGC 59.798 52.381 0.00 0.00 0.00 4.40
495 516 2.425578 GGCTAACTACTGCCTCGATC 57.574 55.000 0.00 0.00 45.26 3.69
514 535 1.072505 AGTCGACCGGCAATGGTTT 59.927 52.632 13.01 0.00 44.01 3.27
516 537 1.158434 GTCGACCGGCAATGGTTTTA 58.842 50.000 3.51 0.00 44.01 1.52
518 539 1.740585 TCGACCGGCAATGGTTTTATG 59.259 47.619 0.00 0.00 44.01 1.90
525 546 3.730662 CGGCAATGGTTTTATGAAGGACG 60.731 47.826 0.00 0.00 0.00 4.79
528 549 5.465935 GCAATGGTTTTATGAAGGACGAAA 58.534 37.500 0.00 0.00 0.00 3.46
529 550 5.572896 GCAATGGTTTTATGAAGGACGAAAG 59.427 40.000 0.00 0.00 0.00 2.62
531 552 7.538575 CAATGGTTTTATGAAGGACGAAAGAT 58.461 34.615 0.00 0.00 0.00 2.40
534 555 6.148811 TGGTTTTATGAAGGACGAAAGATGAC 59.851 38.462 0.00 0.00 0.00 3.06
535 556 6.148811 GGTTTTATGAAGGACGAAAGATGACA 59.851 38.462 0.00 0.00 0.00 3.58
536 557 7.308348 GGTTTTATGAAGGACGAAAGATGACAA 60.308 37.037 0.00 0.00 0.00 3.18
537 558 7.737972 TTTATGAAGGACGAAAGATGACAAA 57.262 32.000 0.00 0.00 0.00 2.83
538 559 5.869753 ATGAAGGACGAAAGATGACAAAG 57.130 39.130 0.00 0.00 0.00 2.77
539 560 4.956085 TGAAGGACGAAAGATGACAAAGA 58.044 39.130 0.00 0.00 0.00 2.52
540 561 4.991056 TGAAGGACGAAAGATGACAAAGAG 59.009 41.667 0.00 0.00 0.00 2.85
541 562 3.931578 AGGACGAAAGATGACAAAGAGG 58.068 45.455 0.00 0.00 0.00 3.69
542 563 3.325135 AGGACGAAAGATGACAAAGAGGT 59.675 43.478 0.00 0.00 0.00 3.85
543 564 4.065789 GGACGAAAGATGACAAAGAGGTT 58.934 43.478 0.00 0.00 0.00 3.50
544 565 4.152580 GGACGAAAGATGACAAAGAGGTTC 59.847 45.833 0.00 0.00 0.00 3.62
545 566 4.065789 ACGAAAGATGACAAAGAGGTTCC 58.934 43.478 0.00 0.00 0.00 3.62
546 567 4.065088 CGAAAGATGACAAAGAGGTTCCA 58.935 43.478 0.00 0.00 0.00 3.53
547 568 4.083802 CGAAAGATGACAAAGAGGTTCCAC 60.084 45.833 0.00 0.00 0.00 4.02
548 569 4.437682 AAGATGACAAAGAGGTTCCACA 57.562 40.909 0.00 0.00 0.00 4.17
549 570 4.437682 AGATGACAAAGAGGTTCCACAA 57.562 40.909 0.00 0.00 0.00 3.33
550 571 4.990526 AGATGACAAAGAGGTTCCACAAT 58.009 39.130 0.00 0.00 0.00 2.71
551 572 4.763793 AGATGACAAAGAGGTTCCACAATG 59.236 41.667 0.00 0.00 0.00 2.82
552 573 2.622942 TGACAAAGAGGTTCCACAATGC 59.377 45.455 0.00 0.00 0.00 3.56
553 574 2.887152 GACAAAGAGGTTCCACAATGCT 59.113 45.455 0.00 0.00 0.00 3.79
554 575 4.072131 GACAAAGAGGTTCCACAATGCTA 58.928 43.478 0.00 0.00 0.00 3.49
555 576 4.469657 ACAAAGAGGTTCCACAATGCTAA 58.530 39.130 0.00 0.00 0.00 3.09
556 577 4.892934 ACAAAGAGGTTCCACAATGCTAAA 59.107 37.500 0.00 0.00 0.00 1.85
557 578 5.362430 ACAAAGAGGTTCCACAATGCTAAAA 59.638 36.000 0.00 0.00 0.00 1.52
558 579 6.127196 ACAAAGAGGTTCCACAATGCTAAAAA 60.127 34.615 0.00 0.00 0.00 1.94
559 580 6.670695 AAGAGGTTCCACAATGCTAAAAAT 57.329 33.333 0.00 0.00 0.00 1.82
560 581 6.670695 AGAGGTTCCACAATGCTAAAAATT 57.329 33.333 0.00 0.00 0.00 1.82
561 582 7.066307 AGAGGTTCCACAATGCTAAAAATTT 57.934 32.000 0.00 0.00 0.00 1.82
562 583 6.930722 AGAGGTTCCACAATGCTAAAAATTTG 59.069 34.615 0.00 0.00 0.00 2.32
563 584 6.825610 AGGTTCCACAATGCTAAAAATTTGA 58.174 32.000 0.00 0.00 0.00 2.69
564 585 6.705825 AGGTTCCACAATGCTAAAAATTTGAC 59.294 34.615 0.00 0.00 0.00 3.18
565 586 6.346518 GGTTCCACAATGCTAAAAATTTGACG 60.347 38.462 0.00 0.00 0.00 4.35
566 587 5.837437 TCCACAATGCTAAAAATTTGACGT 58.163 33.333 0.00 0.00 0.00 4.34
567 588 5.918011 TCCACAATGCTAAAAATTTGACGTC 59.082 36.000 9.11 9.11 0.00 4.34
568 589 5.689514 CCACAATGCTAAAAATTTGACGTCA 59.310 36.000 15.76 15.76 0.00 4.35
569 590 6.129115 CCACAATGCTAAAAATTTGACGTCAG 60.129 38.462 19.11 5.58 0.00 3.51
570 591 6.636447 CACAATGCTAAAAATTTGACGTCAGA 59.364 34.615 19.11 15.36 0.00 3.27
571 592 7.326789 CACAATGCTAAAAATTTGACGTCAGAT 59.673 33.333 19.11 17.13 0.00 2.90
572 593 7.867403 ACAATGCTAAAAATTTGACGTCAGATT 59.133 29.630 24.27 24.27 32.82 2.40
573 594 8.368126 CAATGCTAAAAATTTGACGTCAGATTC 58.632 33.333 28.30 18.27 30.57 2.52
574 595 7.202016 TGCTAAAAATTTGACGTCAGATTCT 57.798 32.000 28.30 21.48 30.57 2.40
575 596 7.648142 TGCTAAAAATTTGACGTCAGATTCTT 58.352 30.769 28.30 24.10 30.57 2.52
576 597 8.779303 TGCTAAAAATTTGACGTCAGATTCTTA 58.221 29.630 28.30 23.96 30.57 2.10
577 598 9.607285 GCTAAAAATTTGACGTCAGATTCTTAA 57.393 29.630 28.30 15.30 30.57 1.85
579 600 8.507470 AAAAATTTGACGTCAGATTCTTAAGC 57.493 30.769 28.30 0.00 30.57 3.09
580 601 6.801539 AATTTGACGTCAGATTCTTAAGCA 57.198 33.333 24.27 1.47 0.00 3.91
581 602 5.591643 TTTGACGTCAGATTCTTAAGCAC 57.408 39.130 19.11 0.00 0.00 4.40
582 603 4.251543 TGACGTCAGATTCTTAAGCACA 57.748 40.909 15.76 0.00 0.00 4.57
583 604 4.627058 TGACGTCAGATTCTTAAGCACAA 58.373 39.130 15.76 0.00 0.00 3.33
584 605 5.053811 TGACGTCAGATTCTTAAGCACAAA 58.946 37.500 15.76 0.00 0.00 2.83
585 606 5.700832 TGACGTCAGATTCTTAAGCACAAAT 59.299 36.000 15.76 0.00 0.00 2.32
586 607 5.931532 ACGTCAGATTCTTAAGCACAAATG 58.068 37.500 0.00 0.00 0.00 2.32
587 608 5.470098 ACGTCAGATTCTTAAGCACAAATGT 59.530 36.000 0.00 0.00 0.00 2.71
588 609 6.017109 ACGTCAGATTCTTAAGCACAAATGTT 60.017 34.615 0.00 0.00 0.00 2.71
589 610 6.857964 CGTCAGATTCTTAAGCACAAATGTTT 59.142 34.615 0.00 0.00 33.34 2.83
590 611 7.379529 CGTCAGATTCTTAAGCACAAATGTTTT 59.620 33.333 0.00 0.00 30.98 2.43
591 612 9.034544 GTCAGATTCTTAAGCACAAATGTTTTT 57.965 29.630 0.00 0.00 30.98 1.94
597 618 9.809096 TTCTTAAGCACAAATGTTTTTATGACA 57.191 25.926 0.00 0.00 30.98 3.58
598 619 9.809096 TCTTAAGCACAAATGTTTTTATGACAA 57.191 25.926 0.00 0.00 30.98 3.18
611 632 9.046296 TGTTTTTATGACAAATTTAATTGGCGT 57.954 25.926 0.00 0.00 41.42 5.68
618 639 8.459521 TGACAAATTTAATTGGCGTAAGAATG 57.540 30.769 0.00 0.00 41.42 2.67
619 640 7.543868 TGACAAATTTAATTGGCGTAAGAATGG 59.456 33.333 0.00 0.00 41.42 3.16
620 641 7.607250 ACAAATTTAATTGGCGTAAGAATGGA 58.393 30.769 0.00 0.00 35.06 3.41
621 642 8.091449 ACAAATTTAATTGGCGTAAGAATGGAA 58.909 29.630 0.00 0.00 35.06 3.53
622 643 8.930760 CAAATTTAATTGGCGTAAGAATGGAAA 58.069 29.630 0.00 0.00 43.02 3.13
623 644 9.665719 AAATTTAATTGGCGTAAGAATGGAAAT 57.334 25.926 0.00 0.00 43.02 2.17
624 645 9.665719 AATTTAATTGGCGTAAGAATGGAAATT 57.334 25.926 0.00 0.00 43.02 1.82
625 646 9.665719 ATTTAATTGGCGTAAGAATGGAAATTT 57.334 25.926 0.00 0.00 43.02 1.82
629 650 9.665719 AATTGGCGTAAGAATGGAAATTTAATT 57.334 25.926 0.00 0.00 43.02 1.40
630 651 9.665719 ATTGGCGTAAGAATGGAAATTTAATTT 57.334 25.926 2.23 2.23 43.02 1.82
639 660 9.520204 AGAATGGAAATTTAATTTATGAGCACG 57.480 29.630 2.65 0.00 31.47 5.34
640 661 9.515020 GAATGGAAATTTAATTTATGAGCACGA 57.485 29.630 2.65 0.00 31.47 4.35
641 662 8.856490 ATGGAAATTTAATTTATGAGCACGAC 57.144 30.769 2.65 0.00 31.47 4.34
642 663 7.254852 TGGAAATTTAATTTATGAGCACGACC 58.745 34.615 2.65 0.00 31.47 4.79
643 664 7.094162 TGGAAATTTAATTTATGAGCACGACCA 60.094 33.333 2.65 0.32 31.47 4.02
644 665 7.920682 GGAAATTTAATTTATGAGCACGACCAT 59.079 33.333 2.65 0.00 31.47 3.55
645 666 9.301153 GAAATTTAATTTATGAGCACGACCATT 57.699 29.630 2.65 0.00 31.47 3.16
646 667 9.651913 AAATTTAATTTATGAGCACGACCATTT 57.348 25.926 0.54 0.00 0.00 2.32
647 668 9.651913 AATTTAATTTATGAGCACGACCATTTT 57.348 25.926 0.00 0.00 0.00 1.82
648 669 8.682128 TTTAATTTATGAGCACGACCATTTTC 57.318 30.769 0.00 0.00 0.00 2.29
649 670 6.515272 AATTTATGAGCACGACCATTTTCT 57.485 33.333 0.00 0.00 0.00 2.52
650 671 4.944962 TTATGAGCACGACCATTTTCTG 57.055 40.909 0.00 0.00 0.00 3.02
664 685 6.622833 CCATTTTCTGGCAAAAATTGAACT 57.377 33.333 9.18 0.00 38.47 3.01
665 686 6.432107 CCATTTTCTGGCAAAAATTGAACTG 58.568 36.000 9.18 4.36 38.47 3.16
666 687 6.260493 CCATTTTCTGGCAAAAATTGAACTGA 59.740 34.615 9.18 0.00 38.47 3.41
667 688 6.907206 TTTTCTGGCAAAAATTGAACTGAG 57.093 33.333 0.00 0.00 0.00 3.35
668 689 3.981211 TCTGGCAAAAATTGAACTGAGC 58.019 40.909 0.00 0.00 0.00 4.26
669 690 3.062042 CTGGCAAAAATTGAACTGAGCC 58.938 45.455 0.00 0.00 41.15 4.70
670 691 2.061028 GGCAAAAATTGAACTGAGCCG 58.939 47.619 0.00 0.00 0.00 5.52
671 692 2.061028 GCAAAAATTGAACTGAGCCGG 58.939 47.619 0.00 0.00 0.00 6.13
672 693 2.288152 GCAAAAATTGAACTGAGCCGGA 60.288 45.455 5.05 0.00 0.00 5.14
673 694 3.614870 GCAAAAATTGAACTGAGCCGGAT 60.615 43.478 5.05 0.00 0.00 4.18
674 695 4.559153 CAAAAATTGAACTGAGCCGGATT 58.441 39.130 5.05 0.00 0.00 3.01
675 696 4.871933 AAAATTGAACTGAGCCGGATTT 57.128 36.364 5.05 0.00 0.00 2.17
676 697 5.975693 AAAATTGAACTGAGCCGGATTTA 57.024 34.783 5.05 0.00 0.00 1.40
677 698 6.530019 AAAATTGAACTGAGCCGGATTTAT 57.470 33.333 5.05 0.00 0.00 1.40
678 699 5.757850 AATTGAACTGAGCCGGATTTATC 57.242 39.130 5.05 0.00 0.00 1.75
679 700 3.904800 TGAACTGAGCCGGATTTATCA 57.095 42.857 5.05 0.00 0.00 2.15
680 701 4.422073 TGAACTGAGCCGGATTTATCAT 57.578 40.909 5.05 0.00 0.00 2.45
681 702 5.545063 TGAACTGAGCCGGATTTATCATA 57.455 39.130 5.05 0.00 0.00 2.15
682 703 5.297547 TGAACTGAGCCGGATTTATCATAC 58.702 41.667 5.05 0.00 0.00 2.39
683 704 4.273148 ACTGAGCCGGATTTATCATACC 57.727 45.455 5.05 0.00 0.00 2.73
684 705 3.008049 ACTGAGCCGGATTTATCATACCC 59.992 47.826 5.05 0.00 0.00 3.69
685 706 2.304761 TGAGCCGGATTTATCATACCCC 59.695 50.000 5.05 0.00 0.00 4.95
686 707 2.304761 GAGCCGGATTTATCATACCCCA 59.695 50.000 5.05 0.00 0.00 4.96
687 708 2.039879 AGCCGGATTTATCATACCCCAC 59.960 50.000 5.05 0.00 0.00 4.61
688 709 2.039879 GCCGGATTTATCATACCCCACT 59.960 50.000 5.05 0.00 0.00 4.00
689 710 3.497942 GCCGGATTTATCATACCCCACTT 60.498 47.826 5.05 0.00 0.00 3.16
690 711 4.072131 CCGGATTTATCATACCCCACTTG 58.928 47.826 0.00 0.00 0.00 3.16
691 712 3.502211 CGGATTTATCATACCCCACTTGC 59.498 47.826 0.00 0.00 0.00 4.01
692 713 3.826729 GGATTTATCATACCCCACTTGCC 59.173 47.826 0.00 0.00 0.00 4.52
693 714 4.469657 GATTTATCATACCCCACTTGCCA 58.530 43.478 0.00 0.00 0.00 4.92
694 715 4.323569 TTTATCATACCCCACTTGCCAA 57.676 40.909 0.00 0.00 0.00 4.52
695 716 2.143876 ATCATACCCCACTTGCCAAC 57.856 50.000 0.00 0.00 0.00 3.77
696 717 1.072266 TCATACCCCACTTGCCAACT 58.928 50.000 0.00 0.00 0.00 3.16
697 718 2.270858 TCATACCCCACTTGCCAACTA 58.729 47.619 0.00 0.00 0.00 2.24
698 719 2.645297 TCATACCCCACTTGCCAACTAA 59.355 45.455 0.00 0.00 0.00 2.24
699 720 3.074687 TCATACCCCACTTGCCAACTAAA 59.925 43.478 0.00 0.00 0.00 1.85
700 721 1.699730 ACCCCACTTGCCAACTAAAC 58.300 50.000 0.00 0.00 0.00 2.01
701 722 1.216930 ACCCCACTTGCCAACTAAACT 59.783 47.619 0.00 0.00 0.00 2.66
702 723 1.886542 CCCCACTTGCCAACTAAACTC 59.113 52.381 0.00 0.00 0.00 3.01
703 724 1.535462 CCCACTTGCCAACTAAACTCG 59.465 52.381 0.00 0.00 0.00 4.18
704 725 1.069227 CCACTTGCCAACTAAACTCGC 60.069 52.381 0.00 0.00 0.00 5.03
705 726 1.069227 CACTTGCCAACTAAACTCGCC 60.069 52.381 0.00 0.00 0.00 5.54
706 727 0.165944 CTTGCCAACTAAACTCGCCG 59.834 55.000 0.00 0.00 0.00 6.46
707 728 0.533308 TTGCCAACTAAACTCGCCGT 60.533 50.000 0.00 0.00 0.00 5.68
708 729 0.317799 TGCCAACTAAACTCGCCGTA 59.682 50.000 0.00 0.00 0.00 4.02
709 730 1.270199 TGCCAACTAAACTCGCCGTAA 60.270 47.619 0.00 0.00 0.00 3.18
710 731 1.127397 GCCAACTAAACTCGCCGTAAC 59.873 52.381 0.00 0.00 0.00 2.50
711 732 2.406130 CCAACTAAACTCGCCGTAACA 58.594 47.619 0.00 0.00 0.00 2.41
712 733 2.156310 CCAACTAAACTCGCCGTAACAC 59.844 50.000 0.00 0.00 0.00 3.32
713 734 2.796031 CAACTAAACTCGCCGTAACACA 59.204 45.455 0.00 0.00 0.00 3.72
714 735 3.096489 ACTAAACTCGCCGTAACACAA 57.904 42.857 0.00 0.00 0.00 3.33
715 736 3.456280 ACTAAACTCGCCGTAACACAAA 58.544 40.909 0.00 0.00 0.00 2.83
716 737 4.060205 ACTAAACTCGCCGTAACACAAAT 58.940 39.130 0.00 0.00 0.00 2.32
717 738 3.974871 AAACTCGCCGTAACACAAATT 57.025 38.095 0.00 0.00 0.00 1.82
718 739 2.961522 ACTCGCCGTAACACAAATTG 57.038 45.000 0.00 0.00 0.00 2.32
719 740 1.069500 ACTCGCCGTAACACAAATTGC 60.069 47.619 0.00 0.00 0.00 3.56
720 741 1.196808 CTCGCCGTAACACAAATTGCT 59.803 47.619 0.00 0.00 0.00 3.91
721 742 2.413796 CTCGCCGTAACACAAATTGCTA 59.586 45.455 0.00 0.00 0.00 3.49
722 743 3.004171 TCGCCGTAACACAAATTGCTAT 58.996 40.909 0.00 0.00 0.00 2.97
723 744 4.182339 TCGCCGTAACACAAATTGCTATA 58.818 39.130 0.00 0.00 0.00 1.31
724 745 4.630505 TCGCCGTAACACAAATTGCTATAA 59.369 37.500 0.00 0.00 0.00 0.98
725 746 5.121925 TCGCCGTAACACAAATTGCTATAAA 59.878 36.000 0.00 0.00 0.00 1.40
726 747 5.795939 CGCCGTAACACAAATTGCTATAAAA 59.204 36.000 0.00 0.00 0.00 1.52
727 748 6.305877 CGCCGTAACACAAATTGCTATAAAAA 59.694 34.615 0.00 0.00 0.00 1.94
728 749 7.441864 GCCGTAACACAAATTGCTATAAAAAC 58.558 34.615 0.00 0.00 0.00 2.43
729 750 7.115095 GCCGTAACACAAATTGCTATAAAAACA 59.885 33.333 0.00 0.00 0.00 2.83
730 751 9.134734 CCGTAACACAAATTGCTATAAAAACAT 57.865 29.630 0.00 0.00 0.00 2.71
734 755 9.469807 AACACAAATTGCTATAAAAACATTCGA 57.530 25.926 0.00 0.00 0.00 3.71
735 756 9.638239 ACACAAATTGCTATAAAAACATTCGAT 57.362 25.926 0.00 0.00 0.00 3.59
743 764 9.667989 TGCTATAAAAACATTCGATTCATCATG 57.332 29.630 0.00 0.00 0.00 3.07
744 765 9.121517 GCTATAAAAACATTCGATTCATCATGG 57.878 33.333 0.00 0.00 0.00 3.66
747 768 4.801147 AACATTCGATTCATCATGGTCG 57.199 40.909 6.93 6.93 35.55 4.79
748 769 4.058721 ACATTCGATTCATCATGGTCGA 57.941 40.909 10.73 10.73 40.86 4.20
754 775 7.728847 TTCGATTCATCATGGTCGAAAATAT 57.271 32.000 19.74 0.00 46.28 1.28
755 776 7.120789 TCGATTCATCATGGTCGAAAATATG 57.879 36.000 11.94 0.00 39.80 1.78
756 777 6.928492 TCGATTCATCATGGTCGAAAATATGA 59.072 34.615 11.94 0.00 39.80 2.15
757 778 7.603784 TCGATTCATCATGGTCGAAAATATGAT 59.396 33.333 11.94 8.35 39.80 2.45
761 782 7.847166 CATCATGGTCGAAAATATGATGTTG 57.153 36.000 21.85 9.08 45.85 3.33
762 783 7.420002 CATCATGGTCGAAAATATGATGTTGT 58.580 34.615 21.85 2.61 45.85 3.32
763 784 8.558700 CATCATGGTCGAAAATATGATGTTGTA 58.441 33.333 21.85 0.00 45.85 2.41
764 785 8.141835 TCATGGTCGAAAATATGATGTTGTAG 57.858 34.615 0.00 0.00 0.00 2.74
765 786 7.768582 TCATGGTCGAAAATATGATGTTGTAGT 59.231 33.333 0.00 0.00 0.00 2.73
766 787 7.302350 TGGTCGAAAATATGATGTTGTAGTG 57.698 36.000 0.00 0.00 0.00 2.74
767 788 6.876789 TGGTCGAAAATATGATGTTGTAGTGT 59.123 34.615 0.00 0.00 0.00 3.55
768 789 7.064134 TGGTCGAAAATATGATGTTGTAGTGTC 59.936 37.037 0.00 0.00 0.00 3.67
769 790 7.399523 GTCGAAAATATGATGTTGTAGTGTCC 58.600 38.462 0.00 0.00 0.00 4.02
770 791 7.064134 GTCGAAAATATGATGTTGTAGTGTCCA 59.936 37.037 0.00 0.00 0.00 4.02
771 792 7.604545 TCGAAAATATGATGTTGTAGTGTCCAA 59.395 33.333 0.00 0.00 0.00 3.53
772 793 7.904977 CGAAAATATGATGTTGTAGTGTCCAAG 59.095 37.037 0.00 0.00 0.00 3.61
777 798 5.482006 TGATGTTGTAGTGTCCAAGAGATG 58.518 41.667 0.00 0.00 0.00 2.90
778 799 3.664107 TGTTGTAGTGTCCAAGAGATGC 58.336 45.455 0.00 0.00 0.00 3.91
802 823 0.030773 TCACGTGCATATCTCTCCGC 59.969 55.000 11.67 0.00 0.00 5.54
805 826 0.665670 CGTGCATATCTCTCCGCCAG 60.666 60.000 0.00 0.00 0.00 4.85
806 827 0.948141 GTGCATATCTCTCCGCCAGC 60.948 60.000 0.00 0.00 0.00 4.85
853 882 1.226916 CTCTACCTCGCAGCAGCTG 60.227 63.158 18.93 18.93 39.10 4.24
862 891 3.090656 CAGCAGCTGCAGATCACG 58.909 61.111 38.24 14.55 45.16 4.35
863 892 1.447314 CAGCAGCTGCAGATCACGA 60.447 57.895 38.24 0.00 45.16 4.35
864 893 0.810426 CAGCAGCTGCAGATCACGAT 60.810 55.000 38.24 13.55 45.16 3.73
865 894 0.107800 AGCAGCTGCAGATCACGATT 60.108 50.000 38.24 12.75 45.16 3.34
869 898 0.376152 GCTGCAGATCACGATTGTGG 59.624 55.000 20.43 0.00 46.42 4.17
871 900 1.662629 CTGCAGATCACGATTGTGGAC 59.337 52.381 8.42 7.62 46.42 4.02
872 901 0.647410 GCAGATCACGATTGTGGACG 59.353 55.000 13.27 1.44 46.42 4.79
875 2286 0.914551 GATCACGATTGTGGACGACG 59.085 55.000 13.27 0.00 46.42 5.12
883 2308 0.800683 TTGTGGACGACGATCATCGC 60.801 55.000 11.67 4.13 45.12 4.58
932 2357 2.806019 GCCATCTAGCATCACTCACTGG 60.806 54.545 0.00 0.00 0.00 4.00
933 2358 2.224233 CCATCTAGCATCACTCACTGGG 60.224 54.545 0.00 0.00 0.00 4.45
941 2366 1.715785 TCACTCACTGGGATCACACA 58.284 50.000 0.00 0.00 0.00 3.72
995 2431 1.058748 CACTGCACGCGGATTAACG 59.941 57.895 12.47 0.00 0.00 3.18
1050 2486 1.043116 CCATCCACGTCCTCCTGCTA 61.043 60.000 0.00 0.00 0.00 3.49
1554 2990 4.736896 GGACCAGACGACGTGCCC 62.737 72.222 4.58 0.00 0.00 5.36
1561 2997 4.353437 ACGACGTGCCCTCGTTCC 62.353 66.667 0.00 0.00 41.58 3.62
1593 3029 4.509737 GACTGCCCCGCGTACCTC 62.510 72.222 4.92 0.00 0.00 3.85
1626 3069 2.579201 CAGTTCGTGGGCCTCGAT 59.421 61.111 28.75 14.28 37.18 3.59
1645 3088 2.202690 CCGCCGATTACGTGCTCA 60.203 61.111 0.00 0.00 37.88 4.26
1693 3140 5.453762 CCACTGGTATGTATTGAGCTCATCA 60.454 44.000 19.04 16.84 35.62 3.07
1694 3141 5.695363 CACTGGTATGTATTGAGCTCATCAG 59.305 44.000 19.04 11.76 39.68 2.90
1714 3165 2.890311 AGTCACTGACACTCCTTCTCAG 59.110 50.000 11.80 0.00 37.93 3.35
1717 3168 2.890311 CACTGACACTCCTTCTCAGTCT 59.110 50.000 0.00 0.00 42.21 3.24
1724 3175 4.202524 ACACTCCTTCTCAGTCTCTACAGT 60.203 45.833 0.00 0.00 0.00 3.55
1726 3177 3.945285 CTCCTTCTCAGTCTCTACAGTCC 59.055 52.174 0.00 0.00 0.00 3.85
1727 3178 3.589735 TCCTTCTCAGTCTCTACAGTCCT 59.410 47.826 0.00 0.00 0.00 3.85
1728 3179 4.043561 TCCTTCTCAGTCTCTACAGTCCTT 59.956 45.833 0.00 0.00 0.00 3.36
1730 3181 5.946972 CCTTCTCAGTCTCTACAGTCCTTAA 59.053 44.000 0.00 0.00 0.00 1.85
1731 3182 6.127842 CCTTCTCAGTCTCTACAGTCCTTAAC 60.128 46.154 0.00 0.00 0.00 2.01
1734 3185 5.877491 TCAGTCTCTACAGTCCTTAACAGA 58.123 41.667 0.00 0.00 0.00 3.41
1735 3186 5.706369 TCAGTCTCTACAGTCCTTAACAGAC 59.294 44.000 0.00 0.00 34.31 3.51
1748 3199 2.225068 AACAGACACTGAGACGTTGG 57.775 50.000 5.76 0.00 35.18 3.77
1755 3206 2.146342 CACTGAGACGTTGGCAATCTT 58.854 47.619 1.92 0.00 0.00 2.40
1998 3452 2.285368 ATGGAGGAGGTGGCGGAA 60.285 61.111 0.00 0.00 0.00 4.30
2020 3474 3.521308 CTTTTCAACAGCGGCGCGT 62.521 57.895 27.59 23.38 0.00 6.01
2337 3794 2.765807 CGGGAGGAGGTGGAGCAT 60.766 66.667 0.00 0.00 0.00 3.79
2383 3840 4.415150 AGTACCGGACGAGGGCGA 62.415 66.667 9.46 0.00 41.64 5.54
2489 3946 1.878522 CGAGGAAATCCGAGCGGTG 60.879 63.158 8.96 0.00 42.08 4.94
2491 3948 1.956629 GAGGAAATCCGAGCGGTGGA 61.957 60.000 8.96 7.98 42.08 4.02
2528 3985 4.051922 CTGTAGTTTCGTGCTGTTTCTCT 58.948 43.478 0.00 0.00 0.00 3.10
2529 3986 3.802139 TGTAGTTTCGTGCTGTTTCTCTG 59.198 43.478 0.00 0.00 0.00 3.35
2530 3987 3.179443 AGTTTCGTGCTGTTTCTCTGA 57.821 42.857 0.00 0.00 0.00 3.27
2531 3988 2.866762 AGTTTCGTGCTGTTTCTCTGAC 59.133 45.455 0.00 0.00 0.00 3.51
2532 3989 2.595124 TTCGTGCTGTTTCTCTGACA 57.405 45.000 0.00 0.00 0.00 3.58
2533 3990 2.595124 TCGTGCTGTTTCTCTGACAA 57.405 45.000 0.00 0.00 0.00 3.18
2534 3991 2.473816 TCGTGCTGTTTCTCTGACAAG 58.526 47.619 0.00 0.00 0.00 3.16
2629 4087 7.983307 AGGTACTAGATACTACAGTTTTCACG 58.017 38.462 0.00 0.00 36.02 4.35
2861 4322 4.148871 CACAGAATATTGACCGACGCTATG 59.851 45.833 0.00 0.00 0.00 2.23
2862 4323 3.675225 CAGAATATTGACCGACGCTATGG 59.325 47.826 0.00 0.00 0.00 2.74
3010 4479 2.125673 GCACGGCACATCTACGGT 60.126 61.111 0.00 0.00 0.00 4.83
3302 4802 1.459592 ACAGATTCGTTTTCTTCGCCG 59.540 47.619 0.00 0.00 0.00 6.46
3507 5008 0.769247 AAACGGGGCCTAAGAGTGTT 59.231 50.000 0.84 0.00 0.00 3.32
3508 5009 0.036306 AACGGGGCCTAAGAGTGTTG 59.964 55.000 0.84 0.00 0.00 3.33
3509 5010 0.834687 ACGGGGCCTAAGAGTGTTGA 60.835 55.000 0.84 0.00 0.00 3.18
3510 5011 0.323629 CGGGGCCTAAGAGTGTTGAA 59.676 55.000 0.84 0.00 0.00 2.69
3511 5012 1.065418 CGGGGCCTAAGAGTGTTGAAT 60.065 52.381 0.84 0.00 0.00 2.57
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
25 26 3.905227 TATACATGTCAGCGCGCGGAG 62.905 57.143 33.58 23.58 0.00 4.63
26 27 2.065906 TATACATGTCAGCGCGCGGA 62.066 55.000 33.06 29.74 0.00 5.54
27 28 1.212455 TTATACATGTCAGCGCGCGG 61.212 55.000 33.06 26.50 0.00 6.46
28 29 0.159554 CTTATACATGTCAGCGCGCG 59.840 55.000 28.44 28.44 0.00 6.86
29 30 1.209128 ACTTATACATGTCAGCGCGC 58.791 50.000 26.66 26.66 0.00 6.86
30 31 3.302480 GGAAACTTATACATGTCAGCGCG 60.302 47.826 0.00 0.00 0.00 6.86
31 32 3.871594 AGGAAACTTATACATGTCAGCGC 59.128 43.478 0.00 0.00 37.44 5.92
32 33 5.462398 GGTAGGAAACTTATACATGTCAGCG 59.538 44.000 0.00 0.00 43.67 5.18
33 34 5.462398 CGGTAGGAAACTTATACATGTCAGC 59.538 44.000 0.00 0.00 43.67 4.26
34 35 5.462398 GCGGTAGGAAACTTATACATGTCAG 59.538 44.000 0.00 0.00 43.67 3.51
35 36 5.353938 GCGGTAGGAAACTTATACATGTCA 58.646 41.667 0.00 0.00 43.67 3.58
36 37 4.748600 GGCGGTAGGAAACTTATACATGTC 59.251 45.833 0.00 0.00 43.67 3.06
37 38 4.407945 AGGCGGTAGGAAACTTATACATGT 59.592 41.667 2.69 2.69 43.67 3.21
38 39 4.957296 AGGCGGTAGGAAACTTATACATG 58.043 43.478 0.00 0.00 43.67 3.21
39 40 5.365619 CAAGGCGGTAGGAAACTTATACAT 58.634 41.667 0.00 0.00 43.67 2.29
40 41 4.383335 CCAAGGCGGTAGGAAACTTATACA 60.383 45.833 0.00 0.00 43.67 2.29
41 42 4.124970 CCAAGGCGGTAGGAAACTTATAC 58.875 47.826 0.00 0.00 43.67 1.47
42 43 3.135167 CCCAAGGCGGTAGGAAACTTATA 59.865 47.826 0.00 0.00 43.67 0.98
43 44 2.092592 CCCAAGGCGGTAGGAAACTTAT 60.093 50.000 0.00 0.00 43.67 1.73
44 45 1.279846 CCCAAGGCGGTAGGAAACTTA 59.720 52.381 0.00 0.00 43.67 2.24
45 46 0.037734 CCCAAGGCGGTAGGAAACTT 59.962 55.000 0.00 0.00 43.67 2.66
46 47 2.479820 GCCCAAGGCGGTAGGAAACT 62.480 60.000 0.00 0.00 41.65 2.66
47 48 2.044555 GCCCAAGGCGGTAGGAAAC 61.045 63.158 0.00 0.00 39.62 2.78
48 49 2.353573 GCCCAAGGCGGTAGGAAA 59.646 61.111 0.00 0.00 39.62 3.13
66 67 0.956633 TTAGATAGCCTACCGCCACG 59.043 55.000 0.00 0.00 38.78 4.94
67 68 1.000618 GGTTAGATAGCCTACCGCCAC 59.999 57.143 0.00 0.00 38.78 5.01
68 69 1.335145 GGTTAGATAGCCTACCGCCA 58.665 55.000 0.00 0.00 38.78 5.69
69 70 0.607112 GGGTTAGATAGCCTACCGCC 59.393 60.000 0.00 0.00 41.39 6.13
76 77 0.607112 GGCGGTAGGGTTAGATAGCC 59.393 60.000 0.00 0.00 45.13 3.93
77 78 1.272769 CTGGCGGTAGGGTTAGATAGC 59.727 57.143 0.00 0.00 0.00 2.97
78 79 2.872732 TCTGGCGGTAGGGTTAGATAG 58.127 52.381 0.00 0.00 0.00 2.08
79 80 3.162666 CATCTGGCGGTAGGGTTAGATA 58.837 50.000 0.00 0.00 0.00 1.98
80 81 1.971357 CATCTGGCGGTAGGGTTAGAT 59.029 52.381 0.00 0.00 0.00 1.98
81 82 1.410004 CATCTGGCGGTAGGGTTAGA 58.590 55.000 0.00 0.00 0.00 2.10
82 83 0.249911 GCATCTGGCGGTAGGGTTAG 60.250 60.000 0.00 0.00 0.00 2.34
83 84 1.692173 GGCATCTGGCGGTAGGGTTA 61.692 60.000 0.00 0.00 46.16 2.85
84 85 2.590092 GCATCTGGCGGTAGGGTT 59.410 61.111 0.00 0.00 0.00 4.11
85 86 3.480133 GGCATCTGGCGGTAGGGT 61.480 66.667 0.00 0.00 46.16 4.34
86 87 4.256180 GGGCATCTGGCGGTAGGG 62.256 72.222 0.00 0.00 46.16 3.53
87 88 3.164269 AGGGCATCTGGCGGTAGG 61.164 66.667 0.00 0.00 46.16 3.18
88 89 2.109799 CAGGGCATCTGGCGGTAG 59.890 66.667 0.00 0.00 46.16 3.18
95 96 2.109799 CTACCGCCAGGGCATCTG 59.890 66.667 11.42 0.00 43.47 2.90
96 97 3.164269 CCTACCGCCAGGGCATCT 61.164 66.667 11.42 0.00 43.47 2.90
97 98 3.161450 TCCTACCGCCAGGGCATC 61.161 66.667 11.42 0.00 43.47 3.91
98 99 3.480133 GTCCTACCGCCAGGGCAT 61.480 66.667 11.42 0.00 40.26 4.40
100 101 3.262448 TTTGTCCTACCGCCAGGGC 62.262 63.158 0.00 0.00 43.47 5.19
101 102 1.078426 CTTTGTCCTACCGCCAGGG 60.078 63.158 1.15 0.00 43.47 4.45
102 103 1.078426 CCTTTGTCCTACCGCCAGG 60.078 63.158 0.00 0.00 45.13 4.45
103 104 1.078426 CCCTTTGTCCTACCGCCAG 60.078 63.158 0.00 0.00 0.00 4.85
104 105 1.420532 AACCCTTTGTCCTACCGCCA 61.421 55.000 0.00 0.00 0.00 5.69
105 106 0.614812 TAACCCTTTGTCCTACCGCC 59.385 55.000 0.00 0.00 0.00 6.13
106 107 2.477845 TTAACCCTTTGTCCTACCGC 57.522 50.000 0.00 0.00 0.00 5.68
107 108 3.619929 CGATTTAACCCTTTGTCCTACCG 59.380 47.826 0.00 0.00 0.00 4.02
108 109 3.376234 GCGATTTAACCCTTTGTCCTACC 59.624 47.826 0.00 0.00 0.00 3.18
109 110 3.063045 CGCGATTTAACCCTTTGTCCTAC 59.937 47.826 0.00 0.00 0.00 3.18
110 111 3.055963 TCGCGATTTAACCCTTTGTCCTA 60.056 43.478 3.71 0.00 0.00 2.94
111 112 2.081462 CGCGATTTAACCCTTTGTCCT 58.919 47.619 0.00 0.00 0.00 3.85
112 113 2.078392 TCGCGATTTAACCCTTTGTCC 58.922 47.619 3.71 0.00 0.00 4.02
113 114 3.817148 TTCGCGATTTAACCCTTTGTC 57.183 42.857 10.88 0.00 0.00 3.18
114 115 4.571372 TTTTCGCGATTTAACCCTTTGT 57.429 36.364 10.88 0.00 0.00 2.83
134 135 9.485206 CAAGATCTGATTCCTGTTTGAAATTTT 57.515 29.630 0.00 0.00 0.00 1.82
135 136 8.863086 TCAAGATCTGATTCCTGTTTGAAATTT 58.137 29.630 0.00 0.00 0.00 1.82
136 137 8.413309 TCAAGATCTGATTCCTGTTTGAAATT 57.587 30.769 0.00 0.00 0.00 1.82
137 138 8.413309 TTCAAGATCTGATTCCTGTTTGAAAT 57.587 30.769 0.00 0.00 32.32 2.17
138 139 7.822161 TTCAAGATCTGATTCCTGTTTGAAA 57.178 32.000 0.00 0.00 32.32 2.69
139 140 7.822161 TTTCAAGATCTGATTCCTGTTTGAA 57.178 32.000 0.00 0.00 32.78 2.69
140 141 8.413309 AATTTCAAGATCTGATTCCTGTTTGA 57.587 30.769 0.00 0.00 32.78 2.69
141 142 8.521176 AGAATTTCAAGATCTGATTCCTGTTTG 58.479 33.333 0.00 0.00 32.78 2.93
142 143 8.647256 AGAATTTCAAGATCTGATTCCTGTTT 57.353 30.769 0.00 0.00 32.78 2.83
143 144 8.647256 AAGAATTTCAAGATCTGATTCCTGTT 57.353 30.769 0.00 0.00 32.78 3.16
144 145 8.647256 AAAGAATTTCAAGATCTGATTCCTGT 57.353 30.769 0.00 0.00 27.08 4.00
161 162 7.667635 TGTTTTGACCCTTTTTGGAAAGAATTT 59.332 29.630 0.70 0.00 44.03 1.82
162 163 7.171653 TGTTTTGACCCTTTTTGGAAAGAATT 58.828 30.769 0.70 0.00 44.03 2.17
163 164 6.716284 TGTTTTGACCCTTTTTGGAAAGAAT 58.284 32.000 0.70 0.00 44.03 2.40
164 165 6.115448 TGTTTTGACCCTTTTTGGAAAGAA 57.885 33.333 0.70 0.00 44.03 2.52
165 166 5.746990 TGTTTTGACCCTTTTTGGAAAGA 57.253 34.783 0.70 0.00 44.03 2.52
166 167 6.112058 TCATGTTTTGACCCTTTTTGGAAAG 58.888 36.000 0.00 0.00 41.56 2.62
167 168 6.054860 TCATGTTTTGACCCTTTTTGGAAA 57.945 33.333 0.00 0.00 38.35 3.13
168 169 5.683876 TCATGTTTTGACCCTTTTTGGAA 57.316 34.783 0.00 0.00 38.35 3.53
169 170 5.683876 TTCATGTTTTGACCCTTTTTGGA 57.316 34.783 0.00 0.00 33.59 3.53
170 171 6.940831 ATTTCATGTTTTGACCCTTTTTGG 57.059 33.333 0.00 0.00 32.84 3.28
171 172 7.125113 CGAATTTCATGTTTTGACCCTTTTTG 58.875 34.615 0.00 0.00 32.84 2.44
172 173 6.259829 CCGAATTTCATGTTTTGACCCTTTTT 59.740 34.615 0.00 0.00 32.84 1.94
173 174 5.757808 CCGAATTTCATGTTTTGACCCTTTT 59.242 36.000 0.00 0.00 32.84 2.27
174 175 5.296748 CCGAATTTCATGTTTTGACCCTTT 58.703 37.500 0.00 0.00 32.84 3.11
175 176 4.799255 GCCGAATTTCATGTTTTGACCCTT 60.799 41.667 0.00 0.00 32.84 3.95
176 177 3.306019 GCCGAATTTCATGTTTTGACCCT 60.306 43.478 0.00 0.00 32.84 4.34
177 178 2.993220 GCCGAATTTCATGTTTTGACCC 59.007 45.455 0.00 0.00 32.84 4.46
178 179 2.993220 GGCCGAATTTCATGTTTTGACC 59.007 45.455 0.00 0.00 32.84 4.02
179 180 2.661195 CGGCCGAATTTCATGTTTTGAC 59.339 45.455 24.07 0.00 32.84 3.18
180 181 2.352225 CCGGCCGAATTTCATGTTTTGA 60.352 45.455 30.73 0.00 0.00 2.69
181 182 1.991965 CCGGCCGAATTTCATGTTTTG 59.008 47.619 30.73 0.00 0.00 2.44
182 183 1.889829 TCCGGCCGAATTTCATGTTTT 59.110 42.857 30.73 0.00 0.00 2.43
183 184 1.540267 TCCGGCCGAATTTCATGTTT 58.460 45.000 30.73 0.00 0.00 2.83
184 185 1.540267 TTCCGGCCGAATTTCATGTT 58.460 45.000 30.73 0.00 0.00 2.71
185 186 1.540267 TTTCCGGCCGAATTTCATGT 58.460 45.000 30.73 0.00 0.00 3.21
186 187 2.258755 GTTTTCCGGCCGAATTTCATG 58.741 47.619 30.73 7.15 0.00 3.07
187 188 1.203758 GGTTTTCCGGCCGAATTTCAT 59.796 47.619 30.73 0.00 0.00 2.57
188 189 0.599060 GGTTTTCCGGCCGAATTTCA 59.401 50.000 30.73 1.54 0.00 2.69
189 190 0.599060 TGGTTTTCCGGCCGAATTTC 59.401 50.000 30.73 13.69 44.36 2.17
190 191 0.315886 GTGGTTTTCCGGCCGAATTT 59.684 50.000 30.73 0.00 44.36 1.82
191 192 1.858372 CGTGGTTTTCCGGCCGAATT 61.858 55.000 30.73 0.00 44.36 2.17
192 193 2.329614 CGTGGTTTTCCGGCCGAAT 61.330 57.895 30.73 0.00 44.36 3.34
193 194 2.973600 CGTGGTTTTCCGGCCGAA 60.974 61.111 30.73 16.49 44.36 4.30
198 199 3.419759 CGAGGCGTGGTTTTCCGG 61.420 66.667 0.00 0.00 44.36 5.14
199 200 2.356553 TCGAGGCGTGGTTTTCCG 60.357 61.111 0.00 0.00 44.36 4.30
200 201 2.664436 CGTCGAGGCGTGGTTTTCC 61.664 63.158 0.00 0.00 41.14 3.13
201 202 1.883725 GACGTCGAGGCGTGGTTTTC 61.884 60.000 7.69 0.00 45.79 2.29
202 203 1.952635 GACGTCGAGGCGTGGTTTT 60.953 57.895 7.69 0.00 45.79 2.43
203 204 2.355481 GACGTCGAGGCGTGGTTT 60.355 61.111 7.69 0.00 45.79 3.27
204 205 2.814183 GATGACGTCGAGGCGTGGTT 62.814 60.000 7.69 0.00 45.79 3.67
205 206 3.338126 GATGACGTCGAGGCGTGGT 62.338 63.158 7.69 0.00 45.79 4.16
206 207 2.579787 GATGACGTCGAGGCGTGG 60.580 66.667 7.69 0.00 45.79 4.94
207 208 2.579787 GGATGACGTCGAGGCGTG 60.580 66.667 7.69 0.00 45.79 5.34
209 210 3.518998 AGGGATGACGTCGAGGCG 61.519 66.667 11.62 0.00 37.94 5.52
210 211 2.105128 CAGGGATGACGTCGAGGC 59.895 66.667 11.62 0.00 0.00 4.70
261 262 2.736144 TGTGACGAATCGGTAGCTTT 57.264 45.000 7.80 0.00 0.00 3.51
262 263 2.230508 TCTTGTGACGAATCGGTAGCTT 59.769 45.455 7.80 0.00 0.00 3.74
271 272 4.867047 CAGCTAGATGTTCTTGTGACGAAT 59.133 41.667 0.00 0.00 0.00 3.34
303 314 1.217882 CACGTCCCAATCTTATCGCC 58.782 55.000 0.00 0.00 0.00 5.54
328 340 2.126467 CAAACAACAAATCTGTGCCGG 58.874 47.619 0.00 0.00 35.37 6.13
332 344 6.464895 ACAAACACAAACAACAAATCTGTG 57.535 33.333 0.00 0.00 42.43 3.66
333 345 7.489574 AAACAAACACAAACAACAAATCTGT 57.510 28.000 0.00 0.00 37.39 3.41
449 470 1.203441 ATGCTGGTCAAGGGCTCAGA 61.203 55.000 0.00 0.00 0.00 3.27
450 471 0.747283 GATGCTGGTCAAGGGCTCAG 60.747 60.000 0.00 0.00 0.00 3.35
456 477 0.036952 AGTGACGATGCTGGTCAAGG 60.037 55.000 6.63 0.00 45.20 3.61
467 488 2.159226 GCAGTAGTTAGCCAGTGACGAT 60.159 50.000 0.00 0.00 0.00 3.73
468 489 1.201647 GCAGTAGTTAGCCAGTGACGA 59.798 52.381 0.00 0.00 0.00 4.20
469 490 1.630148 GCAGTAGTTAGCCAGTGACG 58.370 55.000 0.00 0.00 0.00 4.35
477 498 2.359531 ACTGATCGAGGCAGTAGTTAGC 59.640 50.000 18.77 0.00 44.27 3.09
478 499 4.217754 GACTGATCGAGGCAGTAGTTAG 57.782 50.000 19.83 0.00 45.94 2.34
495 516 1.234615 AAACCATTGCCGGTCGACTG 61.235 55.000 17.81 17.81 38.76 3.51
502 523 2.757868 TCCTTCATAAAACCATTGCCGG 59.242 45.455 0.00 0.00 0.00 6.13
508 529 6.884295 TCATCTTTCGTCCTTCATAAAACCAT 59.116 34.615 0.00 0.00 0.00 3.55
512 533 7.737972 TTGTCATCTTTCGTCCTTCATAAAA 57.262 32.000 0.00 0.00 0.00 1.52
514 535 7.158697 TCTTTGTCATCTTTCGTCCTTCATAA 58.841 34.615 0.00 0.00 0.00 1.90
516 537 5.551233 TCTTTGTCATCTTTCGTCCTTCAT 58.449 37.500 0.00 0.00 0.00 2.57
518 539 4.390297 CCTCTTTGTCATCTTTCGTCCTTC 59.610 45.833 0.00 0.00 0.00 3.46
525 546 4.821805 TGTGGAACCTCTTTGTCATCTTTC 59.178 41.667 0.00 0.00 34.36 2.62
528 549 4.437682 TTGTGGAACCTCTTTGTCATCT 57.562 40.909 0.00 0.00 34.36 2.90
529 550 4.616835 GCATTGTGGAACCTCTTTGTCATC 60.617 45.833 0.00 0.00 34.36 2.92
531 552 2.622942 GCATTGTGGAACCTCTTTGTCA 59.377 45.455 0.00 0.00 34.36 3.58
534 555 5.452078 TTTAGCATTGTGGAACCTCTTTG 57.548 39.130 0.00 0.00 34.36 2.77
535 556 6.478512 TTTTTAGCATTGTGGAACCTCTTT 57.521 33.333 0.00 0.00 34.36 2.52
536 557 6.670695 ATTTTTAGCATTGTGGAACCTCTT 57.329 33.333 0.00 0.00 34.36 2.85
537 558 6.670695 AATTTTTAGCATTGTGGAACCTCT 57.329 33.333 0.00 0.00 34.36 3.69
538 559 6.928492 TCAAATTTTTAGCATTGTGGAACCTC 59.072 34.615 0.00 0.00 34.36 3.85
539 560 6.705825 GTCAAATTTTTAGCATTGTGGAACCT 59.294 34.615 0.00 0.00 34.36 3.50
540 561 6.346518 CGTCAAATTTTTAGCATTGTGGAACC 60.347 38.462 0.00 0.00 34.36 3.62
541 562 6.200097 ACGTCAAATTTTTAGCATTGTGGAAC 59.800 34.615 0.00 0.00 37.35 3.62
542 563 6.276847 ACGTCAAATTTTTAGCATTGTGGAA 58.723 32.000 0.00 0.00 0.00 3.53
543 564 5.837437 ACGTCAAATTTTTAGCATTGTGGA 58.163 33.333 0.00 0.00 0.00 4.02
544 565 5.689514 TGACGTCAAATTTTTAGCATTGTGG 59.310 36.000 17.62 0.00 0.00 4.17
545 566 6.636447 TCTGACGTCAAATTTTTAGCATTGTG 59.364 34.615 20.49 1.43 0.00 3.33
546 567 6.734137 TCTGACGTCAAATTTTTAGCATTGT 58.266 32.000 20.49 0.00 0.00 2.71
547 568 7.801547 ATCTGACGTCAAATTTTTAGCATTG 57.198 32.000 20.49 2.50 0.00 2.82
548 569 8.299570 AGAATCTGACGTCAAATTTTTAGCATT 58.700 29.630 17.73 6.57 0.00 3.56
549 570 7.820648 AGAATCTGACGTCAAATTTTTAGCAT 58.179 30.769 17.73 0.00 0.00 3.79
550 571 7.202016 AGAATCTGACGTCAAATTTTTAGCA 57.798 32.000 17.73 0.00 0.00 3.49
551 572 9.607285 TTAAGAATCTGACGTCAAATTTTTAGC 57.393 29.630 20.39 9.05 0.00 3.09
553 574 9.607285 GCTTAAGAATCTGACGTCAAATTTTTA 57.393 29.630 17.73 18.19 0.00 1.52
554 575 8.134895 TGCTTAAGAATCTGACGTCAAATTTTT 58.865 29.630 20.20 20.20 0.00 1.94
555 576 7.591426 GTGCTTAAGAATCTGACGTCAAATTTT 59.409 33.333 17.73 10.00 0.00 1.82
556 577 7.078228 GTGCTTAAGAATCTGACGTCAAATTT 58.922 34.615 17.73 11.93 0.00 1.82
557 578 6.204688 TGTGCTTAAGAATCTGACGTCAAATT 59.795 34.615 16.76 16.76 0.00 1.82
558 579 5.700832 TGTGCTTAAGAATCTGACGTCAAAT 59.299 36.000 20.49 9.50 0.00 2.32
559 580 5.053811 TGTGCTTAAGAATCTGACGTCAAA 58.946 37.500 20.49 6.93 0.00 2.69
560 581 4.627058 TGTGCTTAAGAATCTGACGTCAA 58.373 39.130 20.49 11.00 0.00 3.18
561 582 4.251543 TGTGCTTAAGAATCTGACGTCA 57.748 40.909 18.88 18.88 0.00 4.35
562 583 5.591643 TTTGTGCTTAAGAATCTGACGTC 57.408 39.130 9.11 9.11 0.00 4.34
563 584 5.470098 ACATTTGTGCTTAAGAATCTGACGT 59.530 36.000 6.67 0.00 0.00 4.34
564 585 5.931532 ACATTTGTGCTTAAGAATCTGACG 58.068 37.500 6.67 0.00 0.00 4.35
565 586 8.579682 AAAACATTTGTGCTTAAGAATCTGAC 57.420 30.769 6.67 0.00 0.00 3.51
571 592 9.809096 TGTCATAAAAACATTTGTGCTTAAGAA 57.191 25.926 6.67 0.00 0.00 2.52
572 593 9.809096 TTGTCATAAAAACATTTGTGCTTAAGA 57.191 25.926 6.67 0.00 0.00 2.10
585 606 9.046296 ACGCCAATTAAATTTGTCATAAAAACA 57.954 25.926 0.00 0.00 0.00 2.83
592 613 9.086336 CATTCTTACGCCAATTAAATTTGTCAT 57.914 29.630 0.00 0.00 0.00 3.06
593 614 7.543868 CCATTCTTACGCCAATTAAATTTGTCA 59.456 33.333 0.00 0.00 0.00 3.58
594 615 7.757624 TCCATTCTTACGCCAATTAAATTTGTC 59.242 33.333 0.00 0.00 0.00 3.18
595 616 7.607250 TCCATTCTTACGCCAATTAAATTTGT 58.393 30.769 0.00 0.00 0.00 2.83
596 617 8.472683 TTCCATTCTTACGCCAATTAAATTTG 57.527 30.769 0.00 0.00 0.00 2.32
597 618 9.665719 ATTTCCATTCTTACGCCAATTAAATTT 57.334 25.926 0.00 0.00 0.00 1.82
598 619 9.665719 AATTTCCATTCTTACGCCAATTAAATT 57.334 25.926 0.00 0.00 0.00 1.82
599 620 9.665719 AAATTTCCATTCTTACGCCAATTAAAT 57.334 25.926 0.00 0.00 0.00 1.40
603 624 9.665719 AATTAAATTTCCATTCTTACGCCAATT 57.334 25.926 0.00 0.00 0.00 2.32
604 625 9.665719 AAATTAAATTTCCATTCTTACGCCAAT 57.334 25.926 0.00 0.00 0.00 3.16
613 634 9.520204 CGTGCTCATAAATTAAATTTCCATTCT 57.480 29.630 0.00 0.00 33.82 2.40
614 635 9.515020 TCGTGCTCATAAATTAAATTTCCATTC 57.485 29.630 0.00 0.00 33.82 2.67
615 636 9.301153 GTCGTGCTCATAAATTAAATTTCCATT 57.699 29.630 0.00 0.00 33.82 3.16
616 637 7.920682 GGTCGTGCTCATAAATTAAATTTCCAT 59.079 33.333 0.00 0.00 33.82 3.41
617 638 7.094162 TGGTCGTGCTCATAAATTAAATTTCCA 60.094 33.333 0.00 0.00 33.82 3.53
618 639 7.254852 TGGTCGTGCTCATAAATTAAATTTCC 58.745 34.615 0.00 0.00 33.82 3.13
619 640 8.856490 ATGGTCGTGCTCATAAATTAAATTTC 57.144 30.769 0.00 0.00 33.82 2.17
620 641 9.651913 AAATGGTCGTGCTCATAAATTAAATTT 57.348 25.926 0.00 0.00 36.29 1.82
621 642 9.651913 AAAATGGTCGTGCTCATAAATTAAATT 57.348 25.926 0.00 0.00 0.00 1.82
622 643 9.301153 GAAAATGGTCGTGCTCATAAATTAAAT 57.699 29.630 0.00 0.00 0.00 1.40
623 644 8.519526 AGAAAATGGTCGTGCTCATAAATTAAA 58.480 29.630 0.00 0.00 0.00 1.52
624 645 7.967854 CAGAAAATGGTCGTGCTCATAAATTAA 59.032 33.333 0.00 0.00 0.00 1.40
625 646 7.415095 CCAGAAAATGGTCGTGCTCATAAATTA 60.415 37.037 0.00 0.00 44.91 1.40
626 647 6.324819 CAGAAAATGGTCGTGCTCATAAATT 58.675 36.000 0.00 0.00 0.00 1.82
627 648 5.163622 CCAGAAAATGGTCGTGCTCATAAAT 60.164 40.000 0.00 0.00 44.91 1.40
628 649 4.155826 CCAGAAAATGGTCGTGCTCATAAA 59.844 41.667 0.00 0.00 44.91 1.40
629 650 3.689161 CCAGAAAATGGTCGTGCTCATAA 59.311 43.478 0.00 0.00 44.91 1.90
630 651 3.270027 CCAGAAAATGGTCGTGCTCATA 58.730 45.455 0.00 0.00 44.91 2.15
631 652 2.086869 CCAGAAAATGGTCGTGCTCAT 58.913 47.619 0.00 0.00 44.91 2.90
632 653 1.522668 CCAGAAAATGGTCGTGCTCA 58.477 50.000 0.00 0.00 44.91 4.26
642 663 7.249186 TCAGTTCAATTTTTGCCAGAAAATG 57.751 32.000 4.07 0.00 38.75 2.32
643 664 6.017687 GCTCAGTTCAATTTTTGCCAGAAAAT 60.018 34.615 0.00 0.00 40.06 1.82
644 665 5.294060 GCTCAGTTCAATTTTTGCCAGAAAA 59.706 36.000 0.00 0.00 33.46 2.29
645 666 4.810491 GCTCAGTTCAATTTTTGCCAGAAA 59.190 37.500 0.00 0.00 0.00 2.52
646 667 4.370917 GCTCAGTTCAATTTTTGCCAGAA 58.629 39.130 0.00 0.00 0.00 3.02
647 668 3.243839 GGCTCAGTTCAATTTTTGCCAGA 60.244 43.478 0.00 0.00 38.99 3.86
648 669 3.062042 GGCTCAGTTCAATTTTTGCCAG 58.938 45.455 0.00 0.00 38.99 4.85
649 670 2.545532 CGGCTCAGTTCAATTTTTGCCA 60.546 45.455 0.00 0.00 39.09 4.92
650 671 2.061028 CGGCTCAGTTCAATTTTTGCC 58.939 47.619 0.00 0.00 36.14 4.52
651 672 2.061028 CCGGCTCAGTTCAATTTTTGC 58.939 47.619 0.00 0.00 0.00 3.68
652 673 3.641437 TCCGGCTCAGTTCAATTTTTG 57.359 42.857 0.00 0.00 0.00 2.44
653 674 4.871933 AATCCGGCTCAGTTCAATTTTT 57.128 36.364 0.00 0.00 0.00 1.94
654 675 4.871933 AAATCCGGCTCAGTTCAATTTT 57.128 36.364 0.00 0.00 0.00 1.82
655 676 5.652014 TGATAAATCCGGCTCAGTTCAATTT 59.348 36.000 0.00 0.00 0.00 1.82
656 677 5.192927 TGATAAATCCGGCTCAGTTCAATT 58.807 37.500 0.00 0.00 0.00 2.32
657 678 4.780815 TGATAAATCCGGCTCAGTTCAAT 58.219 39.130 0.00 0.00 0.00 2.57
658 679 4.214986 TGATAAATCCGGCTCAGTTCAA 57.785 40.909 0.00 0.00 0.00 2.69
659 680 3.904800 TGATAAATCCGGCTCAGTTCA 57.095 42.857 0.00 0.00 0.00 3.18
660 681 4.691216 GGTATGATAAATCCGGCTCAGTTC 59.309 45.833 0.00 0.00 0.00 3.01
661 682 4.505039 GGGTATGATAAATCCGGCTCAGTT 60.505 45.833 0.00 0.00 0.00 3.16
662 683 3.008049 GGGTATGATAAATCCGGCTCAGT 59.992 47.826 0.00 0.00 0.00 3.41
663 684 3.600388 GGGTATGATAAATCCGGCTCAG 58.400 50.000 0.00 0.00 0.00 3.35
664 685 2.304761 GGGGTATGATAAATCCGGCTCA 59.695 50.000 0.00 0.00 0.00 4.26
665 686 2.304761 TGGGGTATGATAAATCCGGCTC 59.695 50.000 0.00 0.00 0.00 4.70
666 687 2.039879 GTGGGGTATGATAAATCCGGCT 59.960 50.000 0.00 0.00 0.00 5.52
667 688 2.039879 AGTGGGGTATGATAAATCCGGC 59.960 50.000 0.00 0.00 0.00 6.13
668 689 4.072131 CAAGTGGGGTATGATAAATCCGG 58.928 47.826 0.00 0.00 0.00 5.14
669 690 3.502211 GCAAGTGGGGTATGATAAATCCG 59.498 47.826 0.00 0.00 0.00 4.18
670 691 3.826729 GGCAAGTGGGGTATGATAAATCC 59.173 47.826 0.00 0.00 0.00 3.01
671 692 4.469657 TGGCAAGTGGGGTATGATAAATC 58.530 43.478 0.00 0.00 0.00 2.17
672 693 4.534647 TGGCAAGTGGGGTATGATAAAT 57.465 40.909 0.00 0.00 0.00 1.40
673 694 4.020543 GTTGGCAAGTGGGGTATGATAAA 58.979 43.478 0.00 0.00 0.00 1.40
674 695 3.268334 AGTTGGCAAGTGGGGTATGATAA 59.732 43.478 6.80 0.00 0.00 1.75
675 696 2.849943 AGTTGGCAAGTGGGGTATGATA 59.150 45.455 6.80 0.00 0.00 2.15
676 697 1.640670 AGTTGGCAAGTGGGGTATGAT 59.359 47.619 6.80 0.00 0.00 2.45
677 698 1.072266 AGTTGGCAAGTGGGGTATGA 58.928 50.000 6.80 0.00 0.00 2.15
678 699 2.799126 TAGTTGGCAAGTGGGGTATG 57.201 50.000 17.67 0.00 0.00 2.39
679 700 3.075432 AGTTTAGTTGGCAAGTGGGGTAT 59.925 43.478 17.67 0.00 0.00 2.73
680 701 2.444010 AGTTTAGTTGGCAAGTGGGGTA 59.556 45.455 17.67 0.00 0.00 3.69
681 702 1.216930 AGTTTAGTTGGCAAGTGGGGT 59.783 47.619 17.67 0.00 0.00 4.95
682 703 1.886542 GAGTTTAGTTGGCAAGTGGGG 59.113 52.381 17.67 0.00 0.00 4.96
683 704 1.535462 CGAGTTTAGTTGGCAAGTGGG 59.465 52.381 17.67 0.00 0.00 4.61
684 705 1.069227 GCGAGTTTAGTTGGCAAGTGG 60.069 52.381 17.67 1.63 0.00 4.00
685 706 1.069227 GGCGAGTTTAGTTGGCAAGTG 60.069 52.381 17.67 0.78 0.00 3.16
686 707 1.235724 GGCGAGTTTAGTTGGCAAGT 58.764 50.000 12.91 12.91 0.00 3.16
687 708 0.165944 CGGCGAGTTTAGTTGGCAAG 59.834 55.000 0.00 0.00 0.00 4.01
688 709 0.533308 ACGGCGAGTTTAGTTGGCAA 60.533 50.000 16.62 0.00 0.00 4.52
689 710 0.317799 TACGGCGAGTTTAGTTGGCA 59.682 50.000 16.62 0.00 0.00 4.92
690 711 1.127397 GTTACGGCGAGTTTAGTTGGC 59.873 52.381 16.62 0.00 0.00 4.52
691 712 2.156310 GTGTTACGGCGAGTTTAGTTGG 59.844 50.000 16.62 0.00 0.00 3.77
692 713 2.796031 TGTGTTACGGCGAGTTTAGTTG 59.204 45.455 16.62 0.00 0.00 3.16
693 714 3.096489 TGTGTTACGGCGAGTTTAGTT 57.904 42.857 16.62 0.00 0.00 2.24
694 715 2.798976 TGTGTTACGGCGAGTTTAGT 57.201 45.000 16.62 0.00 0.00 2.24
695 716 4.657075 ATTTGTGTTACGGCGAGTTTAG 57.343 40.909 16.62 0.00 0.00 1.85
696 717 4.774586 CAATTTGTGTTACGGCGAGTTTA 58.225 39.130 16.62 0.00 0.00 2.01
697 718 3.623863 CAATTTGTGTTACGGCGAGTTT 58.376 40.909 16.62 0.00 0.00 2.66
698 719 2.603652 GCAATTTGTGTTACGGCGAGTT 60.604 45.455 16.62 0.00 0.00 3.01
699 720 1.069500 GCAATTTGTGTTACGGCGAGT 60.069 47.619 16.62 0.00 0.00 4.18
700 721 1.196808 AGCAATTTGTGTTACGGCGAG 59.803 47.619 16.62 0.00 0.00 5.03
701 722 1.231221 AGCAATTTGTGTTACGGCGA 58.769 45.000 16.62 0.00 0.00 5.54
702 723 2.884663 TAGCAATTTGTGTTACGGCG 57.115 45.000 4.80 4.80 0.00 6.46
703 724 7.115095 TGTTTTTATAGCAATTTGTGTTACGGC 59.885 33.333 0.00 0.00 0.00 5.68
704 725 8.508800 TGTTTTTATAGCAATTTGTGTTACGG 57.491 30.769 0.00 0.00 0.00 4.02
708 729 9.469807 TCGAATGTTTTTATAGCAATTTGTGTT 57.530 25.926 0.00 0.00 0.00 3.32
709 730 9.638239 ATCGAATGTTTTTATAGCAATTTGTGT 57.362 25.926 0.00 0.00 0.00 3.72
717 738 9.667989 CATGATGAATCGAATGTTTTTATAGCA 57.332 29.630 0.00 0.00 0.00 3.49
718 739 9.121517 CCATGATGAATCGAATGTTTTTATAGC 57.878 33.333 0.00 0.00 0.00 2.97
721 742 7.857389 CGACCATGATGAATCGAATGTTTTTAT 59.143 33.333 11.94 0.00 36.70 1.40
722 743 7.065204 TCGACCATGATGAATCGAATGTTTTTA 59.935 33.333 16.00 0.00 40.41 1.52
723 744 6.029607 CGACCATGATGAATCGAATGTTTTT 58.970 36.000 11.94 0.00 36.70 1.94
724 745 5.353956 TCGACCATGATGAATCGAATGTTTT 59.646 36.000 16.00 0.00 40.41 2.43
725 746 4.875536 TCGACCATGATGAATCGAATGTTT 59.124 37.500 16.00 0.00 40.41 2.83
726 747 4.441792 TCGACCATGATGAATCGAATGTT 58.558 39.130 16.00 0.00 40.41 2.71
727 748 4.058721 TCGACCATGATGAATCGAATGT 57.941 40.909 16.00 0.00 40.41 2.71
731 752 6.928492 TCATATTTTCGACCATGATGAATCGA 59.072 34.615 14.85 14.85 41.55 3.59
732 753 7.120789 TCATATTTTCGACCATGATGAATCG 57.879 36.000 11.32 11.32 35.91 3.34
738 759 7.572523 ACAACATCATATTTTCGACCATGAT 57.427 32.000 0.00 0.00 38.37 2.45
739 760 7.768582 ACTACAACATCATATTTTCGACCATGA 59.231 33.333 0.00 0.00 32.32 3.07
740 761 7.852454 CACTACAACATCATATTTTCGACCATG 59.148 37.037 0.00 0.00 0.00 3.66
741 762 7.552687 ACACTACAACATCATATTTTCGACCAT 59.447 33.333 0.00 0.00 0.00 3.55
742 763 6.876789 ACACTACAACATCATATTTTCGACCA 59.123 34.615 0.00 0.00 0.00 4.02
743 764 7.303634 ACACTACAACATCATATTTTCGACC 57.696 36.000 0.00 0.00 0.00 4.79
744 765 7.064134 TGGACACTACAACATCATATTTTCGAC 59.936 37.037 0.00 0.00 0.00 4.20
745 766 7.100409 TGGACACTACAACATCATATTTTCGA 58.900 34.615 0.00 0.00 0.00 3.71
746 767 7.302350 TGGACACTACAACATCATATTTTCG 57.698 36.000 0.00 0.00 0.00 3.46
747 768 8.946085 TCTTGGACACTACAACATCATATTTTC 58.054 33.333 0.00 0.00 0.00 2.29
748 769 8.862325 TCTTGGACACTACAACATCATATTTT 57.138 30.769 0.00 0.00 0.00 1.82
749 770 8.321353 TCTCTTGGACACTACAACATCATATTT 58.679 33.333 0.00 0.00 0.00 1.40
750 771 7.851228 TCTCTTGGACACTACAACATCATATT 58.149 34.615 0.00 0.00 0.00 1.28
751 772 7.423844 TCTCTTGGACACTACAACATCATAT 57.576 36.000 0.00 0.00 0.00 1.78
752 773 6.850752 TCTCTTGGACACTACAACATCATA 57.149 37.500 0.00 0.00 0.00 2.15
753 774 5.745312 TCTCTTGGACACTACAACATCAT 57.255 39.130 0.00 0.00 0.00 2.45
754 775 5.482006 CATCTCTTGGACACTACAACATCA 58.518 41.667 0.00 0.00 0.00 3.07
755 776 4.331168 GCATCTCTTGGACACTACAACATC 59.669 45.833 0.00 0.00 0.00 3.06
756 777 4.019860 AGCATCTCTTGGACACTACAACAT 60.020 41.667 0.00 0.00 0.00 2.71
757 778 3.324846 AGCATCTCTTGGACACTACAACA 59.675 43.478 0.00 0.00 0.00 3.33
758 779 3.929610 GAGCATCTCTTGGACACTACAAC 59.070 47.826 0.00 0.00 0.00 3.32
759 780 3.367395 CGAGCATCTCTTGGACACTACAA 60.367 47.826 0.00 0.00 0.00 2.41
760 781 2.164422 CGAGCATCTCTTGGACACTACA 59.836 50.000 0.00 0.00 0.00 2.74
761 782 2.423892 TCGAGCATCTCTTGGACACTAC 59.576 50.000 0.00 0.00 0.00 2.73
762 783 2.723273 TCGAGCATCTCTTGGACACTA 58.277 47.619 0.00 0.00 0.00 2.74
763 784 1.550327 TCGAGCATCTCTTGGACACT 58.450 50.000 0.00 0.00 0.00 3.55
764 785 2.159184 TGATCGAGCATCTCTTGGACAC 60.159 50.000 0.00 0.00 31.92 3.67
765 786 2.102578 TGATCGAGCATCTCTTGGACA 58.897 47.619 0.00 0.00 31.92 4.02
766 787 2.468831 GTGATCGAGCATCTCTTGGAC 58.531 52.381 6.66 0.00 31.92 4.02
767 788 1.066152 CGTGATCGAGCATCTCTTGGA 59.934 52.381 6.66 0.00 39.71 3.53
768 789 1.202348 ACGTGATCGAGCATCTCTTGG 60.202 52.381 6.66 0.00 40.62 3.61
769 790 1.851053 CACGTGATCGAGCATCTCTTG 59.149 52.381 10.90 0.00 40.62 3.02
770 791 2.200792 CACGTGATCGAGCATCTCTT 57.799 50.000 10.90 0.00 40.62 2.85
771 792 3.934521 CACGTGATCGAGCATCTCT 57.065 52.632 10.90 0.00 40.62 3.10
778 799 3.487536 GAGAGATATGCACGTGATCGAG 58.512 50.000 22.23 0.00 40.62 4.04
791 812 1.181786 GCTAGCTGGCGGAGAGATAT 58.818 55.000 6.22 0.00 0.00 1.63
793 814 0.758685 AAGCTAGCTGGCGGAGAGAT 60.759 55.000 20.16 0.00 37.29 2.75
802 823 2.008329 CAGAAAGAGCAAGCTAGCTGG 58.992 52.381 20.16 17.64 46.75 4.85
805 826 0.731994 GCCAGAAAGAGCAAGCTAGC 59.268 55.000 6.62 6.62 0.00 3.42
806 827 2.399916 AGCCAGAAAGAGCAAGCTAG 57.600 50.000 0.00 0.00 0.00 3.42
853 882 0.647410 CGTCCACAATCGTGATCTGC 59.353 55.000 0.00 0.00 46.80 4.26
854 883 1.920574 GTCGTCCACAATCGTGATCTG 59.079 52.381 0.00 0.00 46.80 2.90
857 886 0.524414 TCGTCGTCCACAATCGTGAT 59.476 50.000 0.00 0.00 46.80 3.06
858 887 0.524414 ATCGTCGTCCACAATCGTGA 59.476 50.000 0.00 0.00 46.80 4.35
859 888 0.914551 GATCGTCGTCCACAATCGTG 59.085 55.000 0.00 0.00 43.21 4.35
861 890 1.781429 GATGATCGTCGTCCACAATCG 59.219 52.381 0.00 0.00 0.00 3.34
862 891 1.781429 CGATGATCGTCGTCCACAATC 59.219 52.381 25.78 1.19 36.88 2.67
863 892 1.840181 CGATGATCGTCGTCCACAAT 58.160 50.000 25.78 0.00 36.88 2.71
864 893 0.800683 GCGATGATCGTCGTCCACAA 60.801 55.000 31.77 0.00 42.81 3.33
865 894 1.226575 GCGATGATCGTCGTCCACA 60.227 57.895 31.77 0.00 42.81 4.17
869 898 0.597637 AATGGGCGATGATCGTCGTC 60.598 55.000 31.77 30.60 46.90 4.20
871 900 0.319040 AGAATGGGCGATGATCGTCG 60.319 55.000 28.87 28.87 46.90 5.12
872 901 2.724977 TAGAATGGGCGATGATCGTC 57.275 50.000 16.83 14.34 44.91 4.20
875 2286 5.355071 TGCATTTATAGAATGGGCGATGATC 59.645 40.000 0.00 0.00 0.00 2.92
932 2357 4.642437 TGATAGACTCAGACTGTGTGATCC 59.358 45.833 14.60 3.74 0.00 3.36
933 2358 5.356751 AGTGATAGACTCAGACTGTGTGATC 59.643 44.000 14.60 15.32 33.51 2.92
941 2366 5.071788 AGCTAGCTAGTGATAGACTCAGACT 59.928 44.000 17.69 2.60 34.34 3.24
942 2367 5.305585 AGCTAGCTAGTGATAGACTCAGAC 58.694 45.833 17.69 0.26 34.34 3.51
943 2368 5.071115 TGAGCTAGCTAGTGATAGACTCAGA 59.929 44.000 19.38 1.36 38.76 3.27
944 2369 5.304778 TGAGCTAGCTAGTGATAGACTCAG 58.695 45.833 19.38 0.00 38.76 3.35
945 2370 5.297569 TGAGCTAGCTAGTGATAGACTCA 57.702 43.478 19.38 18.60 39.95 3.41
946 2371 5.862924 CTGAGCTAGCTAGTGATAGACTC 57.137 47.826 19.38 16.49 36.65 3.36
1033 2469 1.043673 GGTAGCAGGAGGACGTGGAT 61.044 60.000 0.00 0.00 33.23 3.41
1194 2630 3.209812 CCGTCGGAGATCTCGGCA 61.210 66.667 22.06 10.71 40.67 5.69
1350 2786 2.126618 TGCAGGAACGCGTCGTAG 60.127 61.111 14.44 4.62 39.99 3.51
1531 2967 4.477975 GTCGTCTGGTCCGAGCCG 62.478 72.222 0.00 0.00 34.56 5.52
1608 3051 3.665675 ATCGAGGCCCACGAACTGC 62.666 63.158 22.76 0.00 42.80 4.40
1626 3069 4.444838 AGCACGTAATCGGCGGCA 62.445 61.111 10.53 0.00 41.85 5.69
1635 3078 3.585862 GAAGGAGTTGATGAGCACGTAA 58.414 45.455 0.00 0.00 0.00 3.18
1693 3140 2.890311 CTGAGAAGGAGTGTCAGTGACT 59.110 50.000 23.29 4.70 41.66 3.41
1694 3141 3.296322 CTGAGAAGGAGTGTCAGTGAC 57.704 52.381 16.68 16.68 41.66 3.67
1714 3165 5.474189 AGTGTCTGTTAAGGACTGTAGAGAC 59.526 44.000 0.00 0.00 35.04 3.36
1717 3168 5.382616 TCAGTGTCTGTTAAGGACTGTAGA 58.617 41.667 0.00 0.00 36.46 2.59
1724 3175 3.220110 ACGTCTCAGTGTCTGTTAAGGA 58.780 45.455 0.00 0.00 32.61 3.36
1726 3177 3.736252 CCAACGTCTCAGTGTCTGTTAAG 59.264 47.826 0.00 0.00 32.61 1.85
1727 3178 3.713288 CCAACGTCTCAGTGTCTGTTAA 58.287 45.455 0.00 0.00 32.61 2.01
1728 3179 2.545113 GCCAACGTCTCAGTGTCTGTTA 60.545 50.000 0.00 0.00 32.61 2.41
1730 3181 0.249489 GCCAACGTCTCAGTGTCTGT 60.249 55.000 0.00 0.00 32.61 3.41
1731 3182 0.249447 TGCCAACGTCTCAGTGTCTG 60.249 55.000 0.00 0.00 0.00 3.51
1734 3185 1.070758 AGATTGCCAACGTCTCAGTGT 59.929 47.619 0.00 0.00 0.00 3.55
1735 3186 1.800805 AGATTGCCAACGTCTCAGTG 58.199 50.000 0.00 0.00 0.00 3.66
1755 3206 5.477607 TGTACTCCGATTCCTTTCAAGAA 57.522 39.130 0.00 0.00 0.00 2.52
1821 3275 1.445582 GTTGTCCAGGTACGCCGAG 60.446 63.158 0.00 0.00 40.50 4.63
1998 3452 2.564721 GCCGCTGTTGAAAAGGCCT 61.565 57.895 0.00 0.00 41.81 5.19
2020 3474 0.764890 CTGACAACCCACAGGAAGGA 59.235 55.000 0.00 0.00 36.73 3.36
2098 3555 1.449423 CCGACCATGGCACGATCAA 60.449 57.895 26.28 0.00 0.00 2.57
2148 3605 4.228567 TGCGTCACGAAGCACCCA 62.229 61.111 0.00 0.00 40.68 4.51
2336 3793 0.107508 CATCACCTCCCTCACGCAAT 60.108 55.000 0.00 0.00 0.00 3.56
2337 3794 1.296392 CATCACCTCCCTCACGCAA 59.704 57.895 0.00 0.00 0.00 4.85
2383 3840 0.674534 GTCTTCACACTCCACTCCGT 59.325 55.000 0.00 0.00 0.00 4.69
2396 3853 2.954684 ATGGCCGCCTTCGTCTTCA 61.955 57.895 11.61 0.00 0.00 3.02
2469 3926 1.364171 CCGCTCGGATTTCCTCGAT 59.636 57.895 1.35 0.00 37.50 3.59
2489 3946 2.028337 GATCTTCCGCCGCTCTCC 59.972 66.667 0.00 0.00 0.00 3.71
2491 3948 0.752009 TACAGATCTTCCGCCGCTCT 60.752 55.000 0.00 0.00 0.00 4.09
2528 3985 3.625764 GTCAAACACAGCCTTACTTGTCA 59.374 43.478 0.00 0.00 0.00 3.58
2529 3986 3.625764 TGTCAAACACAGCCTTACTTGTC 59.374 43.478 0.00 0.00 0.00 3.18
2530 3987 3.616219 TGTCAAACACAGCCTTACTTGT 58.384 40.909 0.00 0.00 0.00 3.16
2531 3988 4.142491 TGTTGTCAAACACAGCCTTACTTG 60.142 41.667 0.00 0.00 41.41 3.16
2532 3989 4.013728 TGTTGTCAAACACAGCCTTACTT 58.986 39.130 0.00 0.00 41.41 2.24
2533 3990 3.616219 TGTTGTCAAACACAGCCTTACT 58.384 40.909 0.00 0.00 41.41 2.24
2534 3991 4.351192 CTTGTTGTCAAACACAGCCTTAC 58.649 43.478 0.00 0.00 45.91 2.34
2748 4206 2.898612 TCATTCATTTTGCAAGGCCAGA 59.101 40.909 5.01 0.00 0.00 3.86
2990 4459 2.802667 CGTAGATGTGCCGTGCTGC 61.803 63.158 0.00 0.00 0.00 5.25
2995 4464 1.080093 CACACCGTAGATGTGCCGT 60.080 57.895 0.00 0.00 0.00 5.68
3052 4521 1.296715 GAGTCCACAAGGCACCGAT 59.703 57.895 0.00 0.00 33.74 4.18
3053 4522 2.741092 GAGTCCACAAGGCACCGA 59.259 61.111 0.00 0.00 33.74 4.69
3054 4523 2.738521 CGAGTCCACAAGGCACCG 60.739 66.667 0.00 0.00 33.74 4.94
3055 4524 3.050275 GCGAGTCCACAAGGCACC 61.050 66.667 0.00 0.00 33.74 5.01
3115 4586 1.021390 CCCGTGCATCTGGTCACTTC 61.021 60.000 0.00 0.00 0.00 3.01
3116 4587 1.003355 CCCGTGCATCTGGTCACTT 60.003 57.895 0.00 0.00 0.00 3.16
3117 4588 2.665000 CCCGTGCATCTGGTCACT 59.335 61.111 0.00 0.00 0.00 3.41
3118 4589 2.436646 CCCCGTGCATCTGGTCAC 60.437 66.667 0.00 0.00 0.00 3.67
3119 4590 4.408821 GCCCCGTGCATCTGGTCA 62.409 66.667 0.00 0.00 40.77 4.02
3122 4593 4.155733 TACGCCCCGTGCATCTGG 62.156 66.667 0.00 0.00 41.39 3.86
3315 4815 4.546224 AAAGAACCCCCAACCTCTTTTA 57.454 40.909 0.00 0.00 35.15 1.52


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.