Multiple sequence alignment - TraesCS5B01G304900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G304900 chr5B 100.000 6935 0 0 1 6935 488827003 488820069 0.000000e+00 12807
1 TraesCS5B01G304900 chr5B 76.204 1807 365 46 3954 5738 87717307 87719070 0.000000e+00 894
2 TraesCS5B01G304900 chr5A 91.607 3348 191 38 3656 6935 513229276 513225951 0.000000e+00 4543
3 TraesCS5B01G304900 chr5A 90.965 1804 99 31 434 2199 513233247 513231470 0.000000e+00 2370
4 TraesCS5B01G304900 chr5A 86.059 581 70 3 2632 3211 513230423 513229853 1.280000e-171 614
5 TraesCS5B01G304900 chr5A 88.439 173 17 3 273 442 513233597 513233425 9.120000e-49 206
6 TraesCS5B01G304900 chr5A 92.029 138 9 1 3212 3349 513229700 513229565 7.100000e-45 193
7 TraesCS5B01G304900 chr5D 94.704 2228 102 8 3656 5872 407758663 407756441 0.000000e+00 3446
8 TraesCS5B01G304900 chr5D 92.021 1692 83 18 528 2199 407762361 407760702 0.000000e+00 2329
9 TraesCS5B01G304900 chr5D 87.308 1891 194 24 3931 5799 407775359 407773493 0.000000e+00 2121
10 TraesCS5B01G304900 chr5D 92.340 718 47 5 6220 6935 407756083 407755372 0.000000e+00 1014
11 TraesCS5B01G304900 chr5D 93.868 424 23 3 6123 6546 407773049 407772629 2.730000e-178 636
12 TraesCS5B01G304900 chr5D 88.411 535 42 10 1069 1594 407779358 407778835 1.640000e-175 627
13 TraesCS5B01G304900 chr5D 81.959 837 62 32 1 796 407782016 407781228 1.640000e-175 627
14 TraesCS5B01G304900 chr5D 85.986 578 75 5 2632 3207 407759587 407759014 1.280000e-171 614
15 TraesCS5B01G304900 chr5D 82.131 610 69 25 1490 2068 407778846 407778246 2.910000e-133 486
16 TraesCS5B01G304900 chr5D 88.764 267 28 1 3391 3657 87803350 87803614 6.710000e-85 326
17 TraesCS5B01G304900 chr5D 91.209 182 13 2 3212 3392 407758845 407758666 1.930000e-60 244
18 TraesCS5B01G304900 chr3A 89.139 267 27 2 3390 3656 45151467 45151731 1.440000e-86 331
19 TraesCS5B01G304900 chr2D 89.015 264 27 2 3393 3656 10764035 10763774 6.710000e-85 326
20 TraesCS5B01G304900 chr2D 87.778 270 31 2 3390 3659 321240770 321240503 1.450000e-81 315
21 TraesCS5B01G304900 chr4D 88.679 265 28 2 3392 3656 48708655 48708917 8.680000e-84 322
22 TraesCS5B01G304900 chr7D 88.390 267 29 2 3390 3656 426171931 426172195 3.120000e-83 320
23 TraesCS5B01G304900 chr7A 87.868 272 31 2 3394 3665 535468312 535468581 1.120000e-82 318
24 TraesCS5B01G304900 chr4A 87.823 271 31 2 3387 3657 63122523 63122791 4.040000e-82 316
25 TraesCS5B01G304900 chr3B 87.591 274 31 2 3394 3666 331237432 331237161 1.450000e-81 315


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G304900 chr5B 488820069 488827003 6934 True 12807.0 12807 100.0000 1 6935 1 chr5B.!!$R1 6934
1 TraesCS5B01G304900 chr5B 87717307 87719070 1763 False 894.0 894 76.2040 3954 5738 1 chr5B.!!$F1 1784
2 TraesCS5B01G304900 chr5A 513225951 513233597 7646 True 1585.2 4543 89.8198 273 6935 5 chr5A.!!$R1 6662
3 TraesCS5B01G304900 chr5D 407755372 407762361 6989 True 1529.4 3446 91.2520 528 6935 5 chr5D.!!$R1 6407
4 TraesCS5B01G304900 chr5D 407772629 407782016 9387 True 899.4 2121 86.7354 1 6546 5 chr5D.!!$R2 6545

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
651 855 0.098376 GTGTCTACTACGTCGGCCAG 59.902 60.0 2.24 0.0 0.00 4.85 F
2172 4250 0.438830 CTGTCAAAAGGTACGCTCGC 59.561 55.0 0.00 0.0 0.00 5.03 F
2621 5831 0.040058 TAGCCACACCCTCCGACTAA 59.960 55.0 0.00 0.0 0.00 2.24 F
2713 6046 0.103208 GACCTGTCGTGGGCTCATAG 59.897 60.0 0.00 0.0 30.82 2.23 F
4318 9759 0.524392 GTGACATGAGCGTCGAGGAG 60.524 60.0 9.75 0.0 38.84 3.69 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2418 5628 0.033228 CTCAGATTAGAGGCAGCCCG 59.967 60.000 8.22 0.0 35.76 6.13 R
3415 7354 1.205179 TGACCAAAGCTAATACGCGGA 59.795 47.619 12.47 0.0 34.40 5.54 R
4318 9759 1.180029 TGTAGTACCTCCGTCCAAGC 58.820 55.000 0.00 0.0 0.00 4.01 R
4678 10122 4.275196 CCGATGTGCTTGAGATCATCATTT 59.725 41.667 0.00 0.0 37.89 2.32 R
6118 11744 0.385974 ATCGTTTTGCTGCGTGCTTC 60.386 50.000 0.00 0.0 43.37 3.86 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
26 27 1.597027 CGAGCCACGACCCAGTTTT 60.597 57.895 0.00 0.00 45.77 2.43
31 32 1.528309 CACGACCCAGTTTTGCCCT 60.528 57.895 0.00 0.00 0.00 5.19
40 41 2.161609 CCAGTTTTGCCCTAACTAAGCG 59.838 50.000 0.00 0.00 34.22 4.68
41 42 1.810755 AGTTTTGCCCTAACTAAGCGC 59.189 47.619 0.00 0.00 34.22 5.92
45 46 1.591863 GCCCTAACTAAGCGCTCCG 60.592 63.158 12.06 7.46 0.00 4.63
55 56 1.877576 AAGCGCTCCGACATCACTCA 61.878 55.000 12.06 0.00 0.00 3.41
59 60 0.109272 GCTCCGACATCACTCACGAA 60.109 55.000 0.00 0.00 0.00 3.85
75 76 2.421073 CACGAACTGCATGATTGGTGAT 59.579 45.455 12.41 0.00 36.86 3.06
76 77 3.084039 ACGAACTGCATGATTGGTGATT 58.916 40.909 0.00 0.00 0.00 2.57
115 116 2.899345 AAGACGCACACTGCACGTGA 62.899 55.000 22.23 3.45 46.81 4.35
119 120 1.648720 GCACACTGCACGTGACAAT 59.351 52.632 22.23 3.68 46.81 2.71
124 125 2.095768 ACACTGCACGTGACAATAATGC 60.096 45.455 22.23 0.00 46.81 3.56
138 139 8.277713 GTGACAATAATGCATATTTCCAATTGC 58.722 33.333 0.00 0.00 31.69 3.56
155 156 5.448496 CCAATTGCGAATAAAATGGACGAGA 60.448 40.000 0.00 0.00 0.00 4.04
189 190 6.535274 GTTCAAAAGGCGAACTTAGTAGAA 57.465 37.500 0.00 0.00 38.85 2.10
190 191 6.361114 GTTCAAAAGGCGAACTTAGTAGAAC 58.639 40.000 0.00 0.00 38.85 3.01
192 193 6.050432 TCAAAAGGCGAACTTAGTAGAACAA 58.950 36.000 0.00 0.00 38.85 2.83
193 194 6.539464 TCAAAAGGCGAACTTAGTAGAACAAA 59.461 34.615 0.00 0.00 38.85 2.83
194 195 7.227910 TCAAAAGGCGAACTTAGTAGAACAAAT 59.772 33.333 0.00 0.00 38.85 2.32
195 196 7.506328 AAAGGCGAACTTAGTAGAACAAATT 57.494 32.000 0.00 0.00 38.85 1.82
196 197 7.506328 AAGGCGAACTTAGTAGAACAAATTT 57.494 32.000 0.00 0.00 37.74 1.82
197 198 8.611654 AAGGCGAACTTAGTAGAACAAATTTA 57.388 30.769 0.00 0.00 37.74 1.40
198 199 8.788325 AGGCGAACTTAGTAGAACAAATTTAT 57.212 30.769 0.00 0.00 0.00 1.40
199 200 9.880157 AGGCGAACTTAGTAGAACAAATTTATA 57.120 29.630 0.00 0.00 0.00 0.98
333 334 6.064717 AGTGCTTGAAATTTTCAGGACTAGT 58.935 36.000 21.45 0.00 41.38 2.57
380 384 4.459390 TCCATGGAAATTCACAAGCATG 57.541 40.909 13.46 0.00 0.00 4.06
509 704 2.679349 GCTTGGCTTCTCTTAGACCTGG 60.679 54.545 0.00 0.00 0.00 4.45
513 708 2.167487 GGCTTCTCTTAGACCTGGTCTG 59.833 54.545 34.05 20.98 43.30 3.51
514 709 2.829120 GCTTCTCTTAGACCTGGTCTGT 59.171 50.000 34.05 15.73 43.30 3.41
515 710 3.367910 GCTTCTCTTAGACCTGGTCTGTG 60.368 52.174 34.05 25.54 43.30 3.66
516 711 3.808834 TCTCTTAGACCTGGTCTGTGA 57.191 47.619 34.05 27.64 43.30 3.58
518 713 4.274147 TCTCTTAGACCTGGTCTGTGATC 58.726 47.826 34.05 5.48 43.30 2.92
519 714 4.017958 TCTCTTAGACCTGGTCTGTGATCT 60.018 45.833 34.05 12.92 43.30 2.75
520 715 4.274147 TCTTAGACCTGGTCTGTGATCTC 58.726 47.826 34.05 3.98 43.30 2.75
521 716 2.917713 AGACCTGGTCTGTGATCTCT 57.082 50.000 27.85 0.83 41.76 3.10
522 717 5.191921 TCTTAGACCTGGTCTGTGATCTCTA 59.808 44.000 34.05 12.26 43.30 2.43
523 718 4.323569 AGACCTGGTCTGTGATCTCTAA 57.676 45.455 27.85 0.00 41.76 2.10
524 719 4.020543 AGACCTGGTCTGTGATCTCTAAC 58.979 47.826 27.85 0.00 41.76 2.34
526 721 3.017442 CCTGGTCTGTGATCTCTAACGA 58.983 50.000 0.00 0.00 0.00 3.85
536 734 5.353400 TGTGATCTCTAACGACTAACGACAT 59.647 40.000 0.00 0.00 45.77 3.06
572 776 2.232452 CTCAGAACATGGTCGTCTCCTT 59.768 50.000 4.80 0.00 0.00 3.36
651 855 0.098376 GTGTCTACTACGTCGGCCAG 59.902 60.000 2.24 0.00 0.00 4.85
789 1030 1.627550 GAGCGCCCAAGAGTCGTTTC 61.628 60.000 2.29 0.00 0.00 2.78
819 1060 2.512515 GCAGCTTCCGCCCTACAG 60.513 66.667 0.00 0.00 36.60 2.74
853 1094 1.340248 GAACCAAGGACTCGTGACTCA 59.660 52.381 0.00 0.00 0.00 3.41
863 1104 2.340078 GTGACTCACTGGCTCGCA 59.660 61.111 1.58 0.00 0.00 5.10
880 1121 3.575630 TCGCAGTTGACTGACTAATGTC 58.424 45.455 14.98 0.00 46.59 3.06
881 1122 2.668457 CGCAGTTGACTGACTAATGTCC 59.332 50.000 14.98 0.00 46.59 4.02
950 2855 1.145325 CTCCACCTACCTACCGATCCT 59.855 57.143 0.00 0.00 0.00 3.24
951 2856 2.374504 CTCCACCTACCTACCGATCCTA 59.625 54.545 0.00 0.00 0.00 2.94
979 2884 1.340248 CGGCCCGCTGGGTATATATAG 59.660 57.143 13.97 0.00 46.51 1.31
982 2887 3.573110 GGCCCGCTGGGTATATATAGTAG 59.427 52.174 13.97 0.00 46.51 2.57
984 2889 5.380043 GCCCGCTGGGTATATATAGTAGTA 58.620 45.833 13.97 0.00 46.51 1.82
985 2890 5.240403 GCCCGCTGGGTATATATAGTAGTAC 59.760 48.000 13.97 0.00 46.51 2.73
986 2891 6.599445 CCCGCTGGGTATATATAGTAGTACT 58.401 44.000 8.14 8.14 38.25 2.73
987 2892 7.690301 GCCCGCTGGGTATATATAGTAGTACTA 60.690 44.444 12.38 12.38 46.51 1.82
988 2893 7.659390 CCCGCTGGGTATATATAGTAGTACTAC 59.341 44.444 23.03 23.03 38.25 2.73
989 2894 7.659390 CCGCTGGGTATATATAGTAGTACTACC 59.341 44.444 25.97 12.43 36.75 3.18
990 2895 7.659390 CGCTGGGTATATATAGTAGTACTACCC 59.341 44.444 25.97 22.35 44.63 3.69
994 2899 8.781951 GGGTATATATAGTAGTACTACCCACCA 58.218 40.741 25.97 11.87 44.08 4.17
995 2900 9.844257 GGTATATATAGTAGTACTACCCACCAG 57.156 40.741 25.97 0.00 36.75 4.00
1045 2950 2.034687 GCTCACCACCACCAGCAT 59.965 61.111 0.00 0.00 0.00 3.79
1080 3011 4.666253 AGCACCACCGGCAGCATT 62.666 61.111 0.00 0.00 30.89 3.56
1125 3058 1.401670 CGAGCACAGCGAGAACTAACT 60.402 52.381 0.00 0.00 0.00 2.24
2006 4078 2.603021 GAGGAGTGGGAGCTCATATCA 58.397 52.381 17.19 5.16 37.24 2.15
2172 4250 0.438830 CTGTCAAAAGGTACGCTCGC 59.561 55.000 0.00 0.00 0.00 5.03
2182 4260 2.543802 TACGCTCGCAGCTCGCTAT 61.544 57.895 6.58 0.00 39.60 2.97
2193 4271 3.242446 GCAGCTCGCTATACTTTTTCACC 60.242 47.826 0.00 0.00 37.77 4.02
2199 4277 7.389607 AGCTCGCTATACTTTTTCACCTTTTTA 59.610 33.333 0.00 0.00 0.00 1.52
2200 4278 8.019094 GCTCGCTATACTTTTTCACCTTTTTAA 58.981 33.333 0.00 0.00 0.00 1.52
2201 4279 9.326339 CTCGCTATACTTTTTCACCTTTTTAAC 57.674 33.333 0.00 0.00 0.00 2.01
2209 4287 9.883142 ACTTTTTCACCTTTTTAACATGATGAA 57.117 25.926 0.00 0.00 0.00 2.57
2214 4292 5.796935 CACCTTTTTAACATGATGAAGCTCG 59.203 40.000 0.00 0.00 0.00 5.03
2218 4296 7.481798 CCTTTTTAACATGATGAAGCTCGTAAC 59.518 37.037 0.00 0.00 0.00 2.50
2219 4297 6.417191 TTTAACATGATGAAGCTCGTAACC 57.583 37.500 0.00 0.00 0.00 2.85
2223 4301 4.943705 ACATGATGAAGCTCGTAACCAATT 59.056 37.500 0.00 0.00 0.00 2.32
2225 4303 4.574892 TGATGAAGCTCGTAACCAATTCA 58.425 39.130 0.00 0.00 0.00 2.57
2226 4304 5.000591 TGATGAAGCTCGTAACCAATTCAA 58.999 37.500 0.00 0.00 31.14 2.69
2227 4305 5.471797 TGATGAAGCTCGTAACCAATTCAAA 59.528 36.000 0.00 0.00 31.14 2.69
2228 4306 5.103290 TGAAGCTCGTAACCAATTCAAAC 57.897 39.130 0.00 0.00 0.00 2.93
2229 4307 4.819630 TGAAGCTCGTAACCAATTCAAACT 59.180 37.500 0.00 0.00 0.00 2.66
2233 4311 7.073342 AGCTCGTAACCAATTCAAACTATTC 57.927 36.000 0.00 0.00 0.00 1.75
2234 4312 6.653320 AGCTCGTAACCAATTCAAACTATTCA 59.347 34.615 0.00 0.00 0.00 2.57
2235 4313 7.174253 AGCTCGTAACCAATTCAAACTATTCAA 59.826 33.333 0.00 0.00 0.00 2.69
2236 4314 7.806014 GCTCGTAACCAATTCAAACTATTCAAA 59.194 33.333 0.00 0.00 0.00 2.69
2237 4315 9.672086 CTCGTAACCAATTCAAACTATTCAAAA 57.328 29.630 0.00 0.00 0.00 2.44
2289 5497 3.763097 TGGCGAATATCACAAAGCAAG 57.237 42.857 0.00 0.00 0.00 4.01
2290 5498 2.159393 TGGCGAATATCACAAAGCAAGC 60.159 45.455 0.00 0.00 0.00 4.01
2334 5542 4.026356 AGGCAAGCACTTTACAAGAGAT 57.974 40.909 0.00 0.00 0.00 2.75
2335 5543 4.401925 AGGCAAGCACTTTACAAGAGATT 58.598 39.130 0.00 0.00 0.00 2.40
2377 5587 1.047002 TTTTTGGGACTGCCATGTGG 58.953 50.000 0.00 0.00 35.15 4.17
2378 5588 0.831288 TTTTGGGACTGCCATGTGGG 60.831 55.000 0.54 0.00 40.85 4.61
2406 5616 4.974645 AAAAGTAGGTCATGGTGTCTGA 57.025 40.909 0.00 0.00 0.00 3.27
2415 5625 1.000843 CATGGTGTCTGACGTCTCCAA 59.999 52.381 17.92 0.00 32.32 3.53
2418 5628 1.336056 GGTGTCTGACGTCTCCAACTC 60.336 57.143 17.92 9.70 0.00 3.01
2422 5632 2.126031 GACGTCTCCAACTCGGGC 60.126 66.667 8.70 0.00 34.36 6.13
2423 5633 2.600769 ACGTCTCCAACTCGGGCT 60.601 61.111 0.00 0.00 34.36 5.19
2426 5636 3.706373 TCTCCAACTCGGGCTGCC 61.706 66.667 11.05 11.05 34.36 4.85
2456 5666 9.558396 AATCTGAGAGGAATTAGAAACATGATC 57.442 33.333 0.00 0.00 0.00 2.92
2457 5667 8.316497 TCTGAGAGGAATTAGAAACATGATCT 57.684 34.615 0.00 5.33 0.00 2.75
2458 5668 8.766476 TCTGAGAGGAATTAGAAACATGATCTT 58.234 33.333 0.00 0.00 0.00 2.40
2459 5669 8.954950 TGAGAGGAATTAGAAACATGATCTTC 57.045 34.615 0.00 0.00 0.00 2.87
2460 5670 8.542926 TGAGAGGAATTAGAAACATGATCTTCA 58.457 33.333 0.00 0.00 0.00 3.02
2461 5671 9.388506 GAGAGGAATTAGAAACATGATCTTCAA 57.611 33.333 0.00 0.00 0.00 2.69
2469 5679 9.730705 TTAGAAACATGATCTTCAAATCTCAGT 57.269 29.630 0.00 0.00 0.00 3.41
2470 5680 8.266392 AGAAACATGATCTTCAAATCTCAGTC 57.734 34.615 0.00 0.00 0.00 3.51
2471 5681 6.659361 AACATGATCTTCAAATCTCAGTCG 57.341 37.500 0.00 0.00 0.00 4.18
2473 5683 5.809562 ACATGATCTTCAAATCTCAGTCGAC 59.190 40.000 7.70 7.70 0.00 4.20
2474 5684 5.651387 TGATCTTCAAATCTCAGTCGACT 57.349 39.130 13.58 13.58 0.00 4.18
2475 5685 5.405797 TGATCTTCAAATCTCAGTCGACTG 58.594 41.667 34.76 34.76 45.08 3.51
2487 5697 4.955925 CAGTCGACTGAGTCTTAGTGAT 57.044 45.455 36.73 0.00 46.59 3.06
2488 5698 4.657055 CAGTCGACTGAGTCTTAGTGATG 58.343 47.826 36.73 8.45 46.59 3.07
2489 5699 4.155099 CAGTCGACTGAGTCTTAGTGATGT 59.845 45.833 36.73 0.00 46.59 3.06
2490 5700 4.762765 AGTCGACTGAGTCTTAGTGATGTT 59.237 41.667 19.30 0.00 0.00 2.71
2491 5701 5.938710 AGTCGACTGAGTCTTAGTGATGTTA 59.061 40.000 19.30 0.00 0.00 2.41
2492 5702 6.600032 AGTCGACTGAGTCTTAGTGATGTTAT 59.400 38.462 19.30 0.00 0.00 1.89
2493 5703 7.769507 AGTCGACTGAGTCTTAGTGATGTTATA 59.230 37.037 19.30 0.00 0.00 0.98
2494 5704 8.561212 GTCGACTGAGTCTTAGTGATGTTATAT 58.439 37.037 11.26 0.00 0.00 0.86
2495 5705 9.121658 TCGACTGAGTCTTAGTGATGTTATATT 57.878 33.333 11.26 0.00 0.00 1.28
2496 5706 9.388346 CGACTGAGTCTTAGTGATGTTATATTC 57.612 37.037 11.26 0.00 0.00 1.75
2522 5732 8.646356 CATAAGATCTTATGTGAAGATTCGAGC 58.354 37.037 33.54 0.00 44.40 5.03
2523 5733 6.154203 AGATCTTATGTGAAGATTCGAGCA 57.846 37.500 1.56 0.00 37.14 4.26
2524 5734 6.577103 AGATCTTATGTGAAGATTCGAGCAA 58.423 36.000 1.56 0.00 37.14 3.91
2525 5735 7.044181 AGATCTTATGTGAAGATTCGAGCAAA 58.956 34.615 1.56 0.00 37.14 3.68
2526 5736 7.550551 AGATCTTATGTGAAGATTCGAGCAAAA 59.449 33.333 1.56 0.00 37.14 2.44
2527 5737 7.615582 TCTTATGTGAAGATTCGAGCAAAAT 57.384 32.000 0.00 0.00 0.00 1.82
2528 5738 8.044060 TCTTATGTGAAGATTCGAGCAAAATT 57.956 30.769 0.00 0.00 0.00 1.82
2529 5739 8.514594 TCTTATGTGAAGATTCGAGCAAAATTT 58.485 29.630 0.00 0.00 0.00 1.82
2530 5740 8.673626 TTATGTGAAGATTCGAGCAAAATTTC 57.326 30.769 0.00 0.00 0.00 2.17
2531 5741 6.317789 TGTGAAGATTCGAGCAAAATTTCT 57.682 33.333 0.00 0.00 0.00 2.52
2532 5742 6.738114 TGTGAAGATTCGAGCAAAATTTCTT 58.262 32.000 0.00 0.00 0.00 2.52
2533 5743 7.202526 TGTGAAGATTCGAGCAAAATTTCTTT 58.797 30.769 0.00 0.00 0.00 2.52
2534 5744 7.706179 TGTGAAGATTCGAGCAAAATTTCTTTT 59.294 29.630 0.00 0.00 34.90 2.27
2535 5745 8.542953 GTGAAGATTCGAGCAAAATTTCTTTTT 58.457 29.630 0.00 0.00 38.05 1.94
2536 5746 9.743057 TGAAGATTCGAGCAAAATTTCTTTTTA 57.257 25.926 0.00 0.00 35.75 1.52
2538 5748 8.232497 AGATTCGAGCAAAATTTCTTTTTAGC 57.768 30.769 0.00 0.00 35.75 3.09
2539 5749 8.084684 AGATTCGAGCAAAATTTCTTTTTAGCT 58.915 29.630 0.00 0.00 40.81 3.32
2540 5750 8.593492 ATTCGAGCAAAATTTCTTTTTAGCTT 57.407 26.923 0.00 0.00 39.53 3.74
2541 5751 8.419076 TTCGAGCAAAATTTCTTTTTAGCTTT 57.581 26.923 0.00 0.00 39.53 3.51
2542 5752 8.419076 TCGAGCAAAATTTCTTTTTAGCTTTT 57.581 26.923 0.00 0.00 39.53 2.27
2543 5753 8.539674 TCGAGCAAAATTTCTTTTTAGCTTTTC 58.460 29.630 0.00 0.00 39.53 2.29
2544 5754 8.542953 CGAGCAAAATTTCTTTTTAGCTTTTCT 58.457 29.630 0.00 0.00 39.53 2.52
2561 5771 8.455903 AGCTTTTCTTCTTTATATGCTATGCA 57.544 30.769 0.00 0.00 44.86 3.96
2562 5772 8.906867 AGCTTTTCTTCTTTATATGCTATGCAA 58.093 29.630 0.00 0.00 43.62 4.08
2563 5773 8.962111 GCTTTTCTTCTTTATATGCTATGCAAC 58.038 33.333 0.00 0.00 43.62 4.17
2564 5774 9.455847 CTTTTCTTCTTTATATGCTATGCAACC 57.544 33.333 0.00 0.00 43.62 3.77
2565 5775 8.752005 TTTCTTCTTTATATGCTATGCAACCT 57.248 30.769 0.00 0.00 43.62 3.50
2566 5776 7.734924 TCTTCTTTATATGCTATGCAACCTG 57.265 36.000 0.00 0.00 43.62 4.00
2567 5777 7.508687 TCTTCTTTATATGCTATGCAACCTGA 58.491 34.615 0.00 0.00 43.62 3.86
2568 5778 7.442364 TCTTCTTTATATGCTATGCAACCTGAC 59.558 37.037 0.00 0.00 43.62 3.51
2569 5779 6.830912 TCTTTATATGCTATGCAACCTGACT 58.169 36.000 0.00 0.00 43.62 3.41
2570 5780 6.707608 TCTTTATATGCTATGCAACCTGACTG 59.292 38.462 0.00 0.00 43.62 3.51
2571 5781 4.694760 ATATGCTATGCAACCTGACTGA 57.305 40.909 0.00 0.00 43.62 3.41
2572 5782 2.391616 TGCTATGCAACCTGACTGAG 57.608 50.000 0.00 0.00 34.76 3.35
2573 5783 1.901833 TGCTATGCAACCTGACTGAGA 59.098 47.619 0.00 0.00 34.76 3.27
2574 5784 2.275318 GCTATGCAACCTGACTGAGAC 58.725 52.381 0.00 0.00 0.00 3.36
2575 5785 2.093764 GCTATGCAACCTGACTGAGACT 60.094 50.000 0.00 0.00 0.00 3.24
2576 5786 3.618507 GCTATGCAACCTGACTGAGACTT 60.619 47.826 0.00 0.00 0.00 3.01
2577 5787 2.245159 TGCAACCTGACTGAGACTTG 57.755 50.000 0.00 0.00 0.00 3.16
2578 5788 1.202687 TGCAACCTGACTGAGACTTGG 60.203 52.381 0.00 0.00 0.00 3.61
2579 5789 1.202698 GCAACCTGACTGAGACTTGGT 60.203 52.381 0.00 0.00 0.00 3.67
2580 5790 2.746472 GCAACCTGACTGAGACTTGGTT 60.746 50.000 6.96 6.96 38.18 3.67
2581 5791 3.494398 GCAACCTGACTGAGACTTGGTTA 60.494 47.826 10.75 0.00 36.22 2.85
2582 5792 4.703897 CAACCTGACTGAGACTTGGTTAA 58.296 43.478 10.75 0.00 36.22 2.01
2583 5793 4.608948 ACCTGACTGAGACTTGGTTAAG 57.391 45.455 0.00 0.00 39.86 1.85
2585 5795 5.145564 ACCTGACTGAGACTTGGTTAAGTA 58.854 41.667 0.00 0.00 46.79 2.24
2586 5796 5.780793 ACCTGACTGAGACTTGGTTAAGTAT 59.219 40.000 0.00 0.00 46.79 2.12
2587 5797 6.952358 ACCTGACTGAGACTTGGTTAAGTATA 59.048 38.462 0.00 0.00 46.79 1.47
2588 5798 7.453752 ACCTGACTGAGACTTGGTTAAGTATAA 59.546 37.037 0.00 0.00 46.79 0.98
2589 5799 7.976734 CCTGACTGAGACTTGGTTAAGTATAAG 59.023 40.741 0.00 0.00 46.79 1.73
2592 5802 7.536855 ACTGAGACTTGGTTAAGTATAAGTCG 58.463 38.462 0.00 0.00 43.26 4.18
2593 5803 7.392673 ACTGAGACTTGGTTAAGTATAAGTCGA 59.607 37.037 0.00 0.00 43.26 4.20
2598 5808 9.500864 GACTTGGTTAAGTATAAGTCGACTAAG 57.499 37.037 20.39 15.46 46.79 2.18
2599 5809 9.236006 ACTTGGTTAAGTATAAGTCGACTAAGA 57.764 33.333 20.39 7.88 45.07 2.10
2600 5810 9.500864 CTTGGTTAAGTATAAGTCGACTAAGAC 57.499 37.037 20.39 15.95 41.23 3.01
2601 5811 7.989826 TGGTTAAGTATAAGTCGACTAAGACC 58.010 38.462 20.39 16.89 41.83 3.85
2602 5812 7.831193 TGGTTAAGTATAAGTCGACTAAGACCT 59.169 37.037 20.39 8.56 41.83 3.85
2603 5813 9.331282 GGTTAAGTATAAGTCGACTAAGACCTA 57.669 37.037 20.39 6.68 41.83 3.08
2605 5815 7.495135 AAGTATAAGTCGACTAAGACCTAGC 57.505 40.000 20.39 4.07 41.83 3.42
2606 5816 5.997129 AGTATAAGTCGACTAAGACCTAGCC 59.003 44.000 20.39 1.43 41.83 3.93
2607 5817 2.803030 AGTCGACTAAGACCTAGCCA 57.197 50.000 18.46 0.00 41.83 4.75
2608 5818 2.367486 AGTCGACTAAGACCTAGCCAC 58.633 52.381 18.46 0.00 41.83 5.01
2609 5819 2.089980 GTCGACTAAGACCTAGCCACA 58.910 52.381 8.70 0.00 35.22 4.17
2610 5820 2.089980 TCGACTAAGACCTAGCCACAC 58.910 52.381 0.00 0.00 0.00 3.82
2611 5821 1.134560 CGACTAAGACCTAGCCACACC 59.865 57.143 0.00 0.00 0.00 4.16
2612 5822 1.481363 GACTAAGACCTAGCCACACCC 59.519 57.143 0.00 0.00 0.00 4.61
2613 5823 1.078989 ACTAAGACCTAGCCACACCCT 59.921 52.381 0.00 0.00 0.00 4.34
2614 5824 1.757699 CTAAGACCTAGCCACACCCTC 59.242 57.143 0.00 0.00 0.00 4.30
2615 5825 0.910088 AAGACCTAGCCACACCCTCC 60.910 60.000 0.00 0.00 0.00 4.30
2616 5826 2.683933 ACCTAGCCACACCCTCCG 60.684 66.667 0.00 0.00 0.00 4.63
2617 5827 2.363795 CCTAGCCACACCCTCCGA 60.364 66.667 0.00 0.00 0.00 4.55
2618 5828 2.722201 CCTAGCCACACCCTCCGAC 61.722 68.421 0.00 0.00 0.00 4.79
2619 5829 1.682684 CTAGCCACACCCTCCGACT 60.683 63.158 0.00 0.00 0.00 4.18
2620 5830 0.395311 CTAGCCACACCCTCCGACTA 60.395 60.000 0.00 0.00 0.00 2.59
2621 5831 0.040058 TAGCCACACCCTCCGACTAA 59.960 55.000 0.00 0.00 0.00 2.24
2622 5832 1.079336 GCCACACCCTCCGACTAAC 60.079 63.158 0.00 0.00 0.00 2.34
2623 5833 1.542187 GCCACACCCTCCGACTAACT 61.542 60.000 0.00 0.00 0.00 2.24
2624 5834 0.531200 CCACACCCTCCGACTAACTC 59.469 60.000 0.00 0.00 0.00 3.01
2625 5835 0.531200 CACACCCTCCGACTAACTCC 59.469 60.000 0.00 0.00 0.00 3.85
2626 5836 0.408700 ACACCCTCCGACTAACTCCT 59.591 55.000 0.00 0.00 0.00 3.69
2627 5837 1.203149 ACACCCTCCGACTAACTCCTT 60.203 52.381 0.00 0.00 0.00 3.36
2628 5838 1.900486 CACCCTCCGACTAACTCCTTT 59.100 52.381 0.00 0.00 0.00 3.11
2629 5839 2.094130 CACCCTCCGACTAACTCCTTTC 60.094 54.545 0.00 0.00 0.00 2.62
2630 5840 2.225318 ACCCTCCGACTAACTCCTTTCT 60.225 50.000 0.00 0.00 0.00 2.52
2658 5991 2.877691 GGCCAGCCGTGTCATTTC 59.122 61.111 0.00 0.00 0.00 2.17
2662 5995 0.452987 CCAGCCGTGTCATTTCCATG 59.547 55.000 0.00 0.00 0.00 3.66
2663 5996 0.452987 CAGCCGTGTCATTTCCATGG 59.547 55.000 4.97 4.97 41.14 3.66
2671 6004 2.040145 TGTCATTTCCATGGTCTGCTCA 59.960 45.455 12.58 3.65 0.00 4.26
2673 6006 3.314635 GTCATTTCCATGGTCTGCTCATC 59.685 47.826 12.58 0.00 0.00 2.92
2674 6007 2.425143 TTTCCATGGTCTGCTCATCC 57.575 50.000 12.58 0.00 0.00 3.51
2679 6012 0.904649 ATGGTCTGCTCATCCACGAA 59.095 50.000 0.00 0.00 33.91 3.85
2681 6014 2.107366 TGGTCTGCTCATCCACGAATA 58.893 47.619 0.00 0.00 0.00 1.75
2711 6044 1.913262 TGACCTGTCGTGGGCTCAT 60.913 57.895 0.00 0.00 35.73 2.90
2712 6045 0.613572 TGACCTGTCGTGGGCTCATA 60.614 55.000 0.00 0.00 35.73 2.15
2713 6046 0.103208 GACCTGTCGTGGGCTCATAG 59.897 60.000 0.00 0.00 30.82 2.23
2715 6048 0.537188 CCTGTCGTGGGCTCATAGTT 59.463 55.000 0.00 0.00 0.00 2.24
2717 6050 2.615493 CCTGTCGTGGGCTCATAGTTTT 60.615 50.000 0.00 0.00 0.00 2.43
2723 6056 3.206964 GTGGGCTCATAGTTTTAGGCTC 58.793 50.000 0.00 0.00 36.17 4.70
2726 6059 3.134804 GGGCTCATAGTTTTAGGCTCAGA 59.865 47.826 0.00 0.00 36.17 3.27
2730 6063 6.015010 GGCTCATAGTTTTAGGCTCAGAGATA 60.015 42.308 0.00 0.00 33.32 1.98
2733 6066 6.546403 TCATAGTTTTAGGCTCAGAGATACGT 59.454 38.462 0.00 0.00 0.00 3.57
2759 6092 2.206750 CTTCCTCCTCGTCTCTCTACG 58.793 57.143 0.00 0.00 44.19 3.51
2764 6097 1.274476 CTCGTCTCTCTACGCGAGC 59.726 63.158 15.93 0.00 43.02 5.03
2774 6107 2.376231 CTACGCGAGCGGAATCGACT 62.376 60.000 21.69 0.39 45.56 4.18
2775 6108 1.153597 TACGCGAGCGGAATCGACTA 61.154 55.000 21.69 0.00 45.56 2.59
2780 6113 2.026301 GCGGAATCGACTAGCGCT 59.974 61.111 17.26 17.26 40.61 5.92
2783 6116 1.396644 CGGAATCGACTAGCGCTAAC 58.603 55.000 19.37 14.01 40.61 2.34
2785 6118 2.652795 GGAATCGACTAGCGCTAACTC 58.347 52.381 19.37 14.20 40.61 3.01
2792 6125 5.271625 TCGACTAGCGCTAACTCTATTTTG 58.728 41.667 19.37 5.04 40.61 2.44
2810 6143 9.162764 TCTATTTTGAGTTACCTGACAAATAGC 57.837 33.333 0.00 0.00 33.38 2.97
2811 6144 7.759489 ATTTTGAGTTACCTGACAAATAGCA 57.241 32.000 0.00 0.00 33.38 3.49
2816 6149 6.016610 TGAGTTACCTGACAAATAGCAAAACC 60.017 38.462 0.00 0.00 0.00 3.27
2828 6161 9.567848 ACAAATAGCAAAACCGTTATATCTTTG 57.432 29.630 0.00 0.00 0.00 2.77
2845 6178 4.594970 TCTTTGAGGGTCACTTGTTTGAA 58.405 39.130 0.00 0.00 0.00 2.69
2857 6190 6.693113 GTCACTTGTTTGAAAATTCCTCTGTC 59.307 38.462 0.00 0.00 0.00 3.51
2858 6191 6.376864 TCACTTGTTTGAAAATTCCTCTGTCA 59.623 34.615 0.00 0.00 0.00 3.58
2859 6192 7.035004 CACTTGTTTGAAAATTCCTCTGTCAA 58.965 34.615 0.00 0.00 0.00 3.18
2860 6193 7.707893 CACTTGTTTGAAAATTCCTCTGTCAAT 59.292 33.333 0.00 0.00 0.00 2.57
2861 6194 8.260114 ACTTGTTTGAAAATTCCTCTGTCAATT 58.740 29.630 0.00 0.00 0.00 2.32
2862 6195 8.647143 TTGTTTGAAAATTCCTCTGTCAATTC 57.353 30.769 0.00 0.00 0.00 2.17
2863 6196 8.010733 TGTTTGAAAATTCCTCTGTCAATTCT 57.989 30.769 0.00 0.00 0.00 2.40
2864 6197 9.130661 TGTTTGAAAATTCCTCTGTCAATTCTA 57.869 29.630 0.00 0.00 0.00 2.10
2889 6230 7.378181 ACAACTGTTAATTCAATGTTCATCCC 58.622 34.615 0.00 0.00 0.00 3.85
2890 6231 7.233348 ACAACTGTTAATTCAATGTTCATCCCT 59.767 33.333 0.00 0.00 0.00 4.20
2981 6322 9.974750 GAACATTTTTATGAAACCGAAAAACAA 57.025 25.926 0.00 0.00 35.51 2.83
3108 6451 4.035324 TCGATGTTCTTAGACCGAGATGTC 59.965 45.833 0.00 0.00 35.43 3.06
3271 6807 1.070289 GGATAAGGGTTAGGCCTCACG 59.930 57.143 9.68 0.00 37.43 4.35
3298 6834 1.611410 CCAGCGCCCAATGCTCATATA 60.611 52.381 2.29 0.00 41.72 0.86
3304 6840 3.125829 CGCCCAATGCTCATATATGTCAC 59.874 47.826 12.42 4.40 38.05 3.67
3375 7314 7.104290 AGTAAAAAGGAGAGAGGATAAAACCG 58.896 38.462 0.00 0.00 34.73 4.44
3395 7334 9.583765 AAAACCGTCTCTCATCTTAAATAGTAC 57.416 33.333 0.00 0.00 0.00 2.73
3396 7335 8.522542 AACCGTCTCTCATCTTAAATAGTACT 57.477 34.615 0.00 0.00 0.00 2.73
3397 7336 8.156994 ACCGTCTCTCATCTTAAATAGTACTC 57.843 38.462 0.00 0.00 0.00 2.59
3398 7337 7.229106 ACCGTCTCTCATCTTAAATAGTACTCC 59.771 40.741 0.00 0.00 0.00 3.85
3419 7358 8.434733 ACTCCTTCTATTTTTATTTACTCCGC 57.565 34.615 0.00 0.00 0.00 5.54
3420 7359 7.224167 ACTCCTTCTATTTTTATTTACTCCGCG 59.776 37.037 0.00 0.00 0.00 6.46
3423 7362 8.985805 CCTTCTATTTTTATTTACTCCGCGTAT 58.014 33.333 4.92 0.00 0.00 3.06
3430 7369 7.775397 TTTATTTACTCCGCGTATTAGCTTT 57.225 32.000 4.92 0.00 34.40 3.51
3431 7370 5.652744 ATTTACTCCGCGTATTAGCTTTG 57.347 39.130 4.92 0.00 34.40 2.77
3432 7371 1.935933 ACTCCGCGTATTAGCTTTGG 58.064 50.000 4.92 0.00 34.40 3.28
3434 7373 1.859080 CTCCGCGTATTAGCTTTGGTC 59.141 52.381 4.92 0.00 34.40 4.02
3436 7375 2.004017 CCGCGTATTAGCTTTGGTCAA 58.996 47.619 4.92 0.00 34.40 3.18
3437 7376 2.417239 CCGCGTATTAGCTTTGGTCAAA 59.583 45.455 4.92 0.00 34.40 2.69
3440 7379 4.728608 CGCGTATTAGCTTTGGTCAAAATC 59.271 41.667 0.00 0.00 34.40 2.17
3441 7380 5.636837 GCGTATTAGCTTTGGTCAAAATCA 58.363 37.500 0.00 0.00 0.00 2.57
3442 7381 6.090129 GCGTATTAGCTTTGGTCAAAATCAA 58.910 36.000 0.00 0.00 0.00 2.57
3443 7382 6.584563 GCGTATTAGCTTTGGTCAAAATCAAA 59.415 34.615 0.00 0.00 0.00 2.69
3444 7383 7.275560 GCGTATTAGCTTTGGTCAAAATCAAAT 59.724 33.333 0.00 0.08 33.19 2.32
3602 7541 9.496873 TTCTACGAATTTGATCAAACTTTAGGA 57.503 29.630 22.71 12.41 32.51 2.94
3603 7542 9.151471 TCTACGAATTTGATCAAACTTTAGGAG 57.849 33.333 22.71 18.34 32.51 3.69
3604 7543 7.145932 ACGAATTTGATCAAACTTTAGGAGG 57.854 36.000 22.71 7.63 32.51 4.30
3607 7546 8.082242 CGAATTTGATCAAACTTTAGGAGGTTT 58.918 33.333 22.71 8.75 31.23 3.27
3632 7571 7.396190 GACTTTAGTCAACTCTTATATGCGG 57.604 40.000 5.04 0.00 44.18 5.69
3633 7572 7.108841 ACTTTAGTCAACTCTTATATGCGGA 57.891 36.000 0.00 0.00 0.00 5.54
3634 7573 7.203910 ACTTTAGTCAACTCTTATATGCGGAG 58.796 38.462 0.00 0.00 0.00 4.63
3636 7575 7.812690 TTAGTCAACTCTTATATGCGGAGTA 57.187 36.000 7.24 0.00 39.09 2.59
3637 7576 6.710597 AGTCAACTCTTATATGCGGAGTAA 57.289 37.500 7.24 0.00 39.09 2.24
3638 7577 7.108841 AGTCAACTCTTATATGCGGAGTAAA 57.891 36.000 7.24 0.00 39.09 2.01
3641 7580 9.472361 GTCAACTCTTATATGCGGAGTAAATAA 57.528 33.333 7.24 0.00 39.09 1.40
3646 7585 9.793245 CTCTTATATGCGGAGTAAATAAAAACG 57.207 33.333 0.00 0.00 0.00 3.60
3650 7589 5.285798 TGCGGAGTAAATAAAAACGAAGG 57.714 39.130 0.00 0.00 0.00 3.46
3651 7590 4.154556 TGCGGAGTAAATAAAAACGAAGGG 59.845 41.667 0.00 0.00 0.00 3.95
3652 7591 4.392754 GCGGAGTAAATAAAAACGAAGGGA 59.607 41.667 0.00 0.00 0.00 4.20
3653 7592 5.446875 GCGGAGTAAATAAAAACGAAGGGAG 60.447 44.000 0.00 0.00 0.00 4.30
3674 7613 7.420184 GGAGTATCTCCTTACGTAGACTAAC 57.580 44.000 8.38 0.00 46.41 2.34
3679 7693 6.492007 TCTCCTTACGTAGACTAACACAAG 57.508 41.667 0.00 0.00 0.00 3.16
3680 7694 5.051891 TCCTTACGTAGACTAACACAAGC 57.948 43.478 0.00 0.00 0.00 4.01
3897 8329 6.509418 TGGTTGGATAGTACTTGAAATTGC 57.491 37.500 0.00 0.00 0.00 3.56
3901 8333 7.251281 GTTGGATAGTACTTGAAATTGCCTTC 58.749 38.462 0.00 0.00 0.00 3.46
3904 8343 7.669722 TGGATAGTACTTGAAATTGCCTTCTTT 59.330 33.333 0.00 0.00 0.00 2.52
3945 9383 9.959749 TTTCTTATTTCTGTGTGTGTTATTTCC 57.040 29.630 0.00 0.00 0.00 3.13
3946 9384 8.684386 TCTTATTTCTGTGTGTGTTATTTCCA 57.316 30.769 0.00 0.00 0.00 3.53
4024 9462 1.335142 GCCAGTCGTATCTTAGAGCGG 60.335 57.143 8.59 0.00 0.00 5.52
4210 9651 7.496920 CCATATCATCTCAAGTGTTGCTTCTTA 59.503 37.037 0.00 0.00 34.69 2.10
4318 9759 0.524392 GTGACATGAGCGTCGAGGAG 60.524 60.000 9.75 0.00 38.84 3.69
4678 10122 3.582647 TGGAAGATACACTTGAGCTGGAA 59.417 43.478 0.00 0.00 39.13 3.53
4717 10161 2.703798 CGGGGAGCTGCACCATTTG 61.704 63.158 17.81 0.63 41.62 2.32
4753 10197 3.796178 TGCGAAAGACAAACATTTCAAGC 59.204 39.130 0.00 0.00 35.58 4.01
4829 10273 2.091885 ACAAAGGTGACACAACTCCCAT 60.092 45.455 8.08 0.00 25.50 4.00
4852 10296 3.350219 GGTATCACCAAGCTGGAGAAA 57.650 47.619 8.91 0.00 40.42 2.52
4908 10352 0.034896 GACTTGGCAGGGAAGACGAA 59.965 55.000 0.44 0.00 0.00 3.85
4911 10355 0.321671 TTGGCAGGGAAGACGAAGAG 59.678 55.000 0.00 0.00 0.00 2.85
4922 10366 4.814771 GGAAGACGAAGAGAAACAAGGAAA 59.185 41.667 0.00 0.00 0.00 3.13
4924 10368 3.802685 AGACGAAGAGAAACAAGGAAACG 59.197 43.478 0.00 0.00 0.00 3.60
4963 10407 3.647590 ACCCCTTTGAAACATTTGCAGAT 59.352 39.130 0.00 0.00 0.00 2.90
5161 10614 0.901827 TGCGCAGATTAGGAGTGGAA 59.098 50.000 5.66 0.00 0.00 3.53
5198 10658 3.492829 GGAAGTAGGGAAGGACTTATGCG 60.493 52.174 0.00 0.00 36.04 4.73
5224 10684 5.245531 TCAATATCAAGGCTTGTTCGTCTT 58.754 37.500 25.39 9.92 0.00 3.01
5746 11209 7.150783 ACTTCAAAAGCAGATTAGTGGATTC 57.849 36.000 0.00 0.00 0.00 2.52
5758 11221 0.960364 GTGGATTCAAGAAGCGCCCA 60.960 55.000 2.29 0.00 0.00 5.36
5775 11238 3.427503 CGCCCAAAGTTTATTACTGGCAG 60.428 47.826 14.16 14.16 41.34 4.85
5794 11257 3.556004 GCAGGTCCATTGTATCTAGGAGC 60.556 52.174 0.00 0.00 46.24 4.70
5799 11262 4.081917 GTCCATTGTATCTAGGAGCTAGCC 60.082 50.000 12.13 2.59 34.36 3.93
5805 11268 0.472898 TCTAGGAGCTAGCCTACGCA 59.527 55.000 12.13 0.00 39.50 5.24
5824 11287 3.128764 CGCACTACCTCTGTTCTGATGTA 59.871 47.826 0.00 0.00 0.00 2.29
5825 11288 4.425520 GCACTACCTCTGTTCTGATGTAC 58.574 47.826 0.00 0.00 0.00 2.90
5826 11289 4.158764 GCACTACCTCTGTTCTGATGTACT 59.841 45.833 0.00 0.00 0.00 2.73
5902 11383 8.759481 TGTATAGGAATGCCATGTATTTTGAA 57.241 30.769 0.00 0.00 36.29 2.69
5903 11384 9.365906 TGTATAGGAATGCCATGTATTTTGAAT 57.634 29.630 0.00 0.00 36.29 2.57
5936 11417 6.291377 TCCAAGAAAGATCTGGCATGTATAC 58.709 40.000 0.00 0.00 35.59 1.47
5948 11432 6.545666 TCTGGCATGTATACCATTTTTGGTAG 59.454 38.462 10.37 0.00 46.34 3.18
5982 11466 6.811665 TCATAAGTTTGAACATAGTCTGACGG 59.188 38.462 1.52 0.00 0.00 4.79
5998 11482 3.322526 CGGAAATTAGCCGGCAAAC 57.677 52.632 31.54 12.97 44.87 2.93
6023 11507 3.138304 CGTGGTGAAGATCAAGTTCCAA 58.862 45.455 0.00 0.00 0.00 3.53
6070 11554 6.092670 ACTTCATCTACGTTGTTCATCATTGG 59.907 38.462 0.00 0.00 0.00 3.16
6118 11744 4.746611 TCACAGATAGTAGCGCATCAATTG 59.253 41.667 11.47 0.00 0.00 2.32
6435 12122 2.452505 CTTCTTCTCCTTCTCCTCCGT 58.547 52.381 0.00 0.00 0.00 4.69
6558 12245 1.766143 GCCCTGCGTGCGATAAGAAG 61.766 60.000 0.00 0.00 0.00 2.85
6568 12255 1.876156 GCGATAAGAAGGCATCAAGGG 59.124 52.381 0.00 0.00 0.00 3.95
6578 12265 7.010339 AGAAGGCATCAAGGGTAGATATTAC 57.990 40.000 0.00 0.00 0.00 1.89
6589 12276 7.336161 AGGGTAGATATTACTGATGATACGC 57.664 40.000 0.00 0.00 0.00 4.42
6600 12287 2.677199 GATGATACGCATCGACCACAT 58.323 47.619 0.00 0.00 43.57 3.21
6602 12289 1.136110 TGATACGCATCGACCACATGT 59.864 47.619 0.00 0.00 33.51 3.21
6633 12320 7.124147 AGAGAAAAAGGACAGTTGGAAATGAAA 59.876 33.333 0.00 0.00 0.00 2.69
6805 12498 2.093500 CCTGAGTTGCTGCTGTATGGTA 60.093 50.000 0.00 0.00 0.00 3.25
6807 12500 3.534554 TGAGTTGCTGCTGTATGGTATG 58.465 45.455 0.00 0.00 0.00 2.39
6814 12507 1.134128 TGCTGTATGGTATGGTGCAGG 60.134 52.381 0.00 0.00 0.00 4.85
6815 12508 1.597742 CTGTATGGTATGGTGCAGGC 58.402 55.000 0.00 0.00 0.00 4.85
6832 12525 1.655350 GCATTGGCATAAGCGCGTC 60.655 57.895 8.43 0.00 43.41 5.19
6833 12526 1.720894 CATTGGCATAAGCGCGTCA 59.279 52.632 8.43 0.00 43.41 4.35
6846 12539 0.095935 CGCGTCAATGCCTCTGAAAG 59.904 55.000 0.00 0.00 0.00 2.62
6865 12559 4.421365 GCAGATGCAACCAAGGGA 57.579 55.556 0.00 0.00 41.59 4.20
6913 12608 0.171007 CATGTCACGTTCCCATTGGC 59.829 55.000 0.00 0.00 0.00 4.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
31 32 1.746787 TGATGTCGGAGCGCTTAGTTA 59.253 47.619 13.26 0.00 0.00 2.24
40 41 0.109272 TTCGTGAGTGATGTCGGAGC 60.109 55.000 0.00 0.00 0.00 4.70
41 42 1.200252 AGTTCGTGAGTGATGTCGGAG 59.800 52.381 0.00 0.00 0.00 4.63
45 46 1.783284 TGCAGTTCGTGAGTGATGTC 58.217 50.000 0.00 0.00 0.00 3.06
55 56 2.183478 TCACCAATCATGCAGTTCGT 57.817 45.000 0.00 0.00 0.00 3.85
59 60 5.475719 CAAAAGAATCACCAATCATGCAGT 58.524 37.500 0.00 0.00 0.00 4.40
75 76 2.425312 TCGCTCTTTGGTTGCAAAAGAA 59.575 40.909 12.00 2.42 41.74 2.52
76 77 2.020720 TCGCTCTTTGGTTGCAAAAGA 58.979 42.857 0.00 6.29 40.46 2.52
115 116 7.208777 TCGCAATTGGAAATATGCATTATTGT 58.791 30.769 3.54 0.00 38.69 2.71
119 120 9.755804 TTTATTCGCAATTGGAAATATGCATTA 57.244 25.926 3.54 0.00 38.69 1.90
124 125 9.258826 TCCATTTTATTCGCAATTGGAAATATG 57.741 29.630 7.72 10.33 32.97 1.78
138 139 4.634443 AGGGTTTCTCGTCCATTTTATTCG 59.366 41.667 0.00 0.00 0.00 3.34
155 156 2.361119 GCCTTTTGAACTCGAAGGGTTT 59.639 45.455 9.05 0.00 40.21 3.27
206 207 9.442047 TTTTTCCTACAATTTTGTTCACAATGT 57.558 25.926 0.63 3.57 42.35 2.71
208 209 9.442047 TGTTTTTCCTACAATTTTGTTCACAAT 57.558 25.926 0.63 0.00 42.35 2.71
209 210 8.833231 TGTTTTTCCTACAATTTTGTTCACAA 57.167 26.923 0.63 0.00 42.35 3.33
210 211 8.877779 CATGTTTTTCCTACAATTTTGTTCACA 58.122 29.630 0.63 0.00 42.35 3.58
211 212 7.850492 GCATGTTTTTCCTACAATTTTGTTCAC 59.150 33.333 0.63 0.00 42.35 3.18
212 213 7.550551 TGCATGTTTTTCCTACAATTTTGTTCA 59.449 29.630 0.63 0.00 42.35 3.18
213 214 7.914465 TGCATGTTTTTCCTACAATTTTGTTC 58.086 30.769 0.63 0.00 42.35 3.18
214 215 7.856145 TGCATGTTTTTCCTACAATTTTGTT 57.144 28.000 0.63 0.00 42.35 2.83
215 216 7.498570 ACATGCATGTTTTTCCTACAATTTTGT 59.501 29.630 26.61 0.00 40.61 2.83
216 217 7.863666 ACATGCATGTTTTTCCTACAATTTTG 58.136 30.769 26.61 0.00 37.90 2.44
217 218 9.553064 TTACATGCATGTTTTTCCTACAATTTT 57.447 25.926 35.45 8.56 41.97 1.82
218 219 9.553064 TTTACATGCATGTTTTTCCTACAATTT 57.447 25.926 35.45 8.95 41.97 1.82
219 220 9.723601 ATTTACATGCATGTTTTTCCTACAATT 57.276 25.926 35.45 14.43 41.97 2.32
220 221 9.723601 AATTTACATGCATGTTTTTCCTACAAT 57.276 25.926 35.45 16.30 41.97 2.71
221 222 9.553064 AAATTTACATGCATGTTTTTCCTACAA 57.447 25.926 35.45 18.18 41.97 2.41
222 223 9.202273 GAAATTTACATGCATGTTTTTCCTACA 57.798 29.630 35.45 13.11 41.97 2.74
223 224 8.655970 GGAAATTTACATGCATGTTTTTCCTAC 58.344 33.333 37.60 26.48 42.35 3.18
224 225 7.543868 CGGAAATTTACATGCATGTTTTTCCTA 59.456 33.333 38.71 24.62 42.79 2.94
225 226 6.368516 CGGAAATTTACATGCATGTTTTTCCT 59.631 34.615 38.71 25.32 42.79 3.36
226 227 6.367422 TCGGAAATTTACATGCATGTTTTTCC 59.633 34.615 36.67 36.67 42.29 3.13
227 228 7.116233 ACTCGGAAATTTACATGCATGTTTTTC 59.884 33.333 35.45 32.30 41.97 2.29
228 229 6.928492 ACTCGGAAATTTACATGCATGTTTTT 59.072 30.769 35.45 28.36 41.97 1.94
271 272 0.611618 ACGGGAAAATGGAGCATGCA 60.612 50.000 21.98 0.00 44.23 3.96
333 334 7.411486 TGTTAATTTGTGTCCAGGAAAGAAA 57.589 32.000 4.40 4.40 0.00 2.52
402 407 2.127383 GAAAAACTCGCCCGCACG 60.127 61.111 0.00 0.00 0.00 5.34
509 704 5.063186 TCGTTAGTCGTTAGAGATCACAGAC 59.937 44.000 0.00 0.00 40.80 3.51
513 708 5.213913 TGTCGTTAGTCGTTAGAGATCAC 57.786 43.478 0.00 0.00 40.80 3.06
514 709 5.729732 GCATGTCGTTAGTCGTTAGAGATCA 60.730 44.000 0.00 0.00 40.80 2.92
515 710 4.671516 GCATGTCGTTAGTCGTTAGAGATC 59.328 45.833 0.00 0.00 40.80 2.75
516 711 4.599047 GCATGTCGTTAGTCGTTAGAGAT 58.401 43.478 0.00 0.00 40.80 2.75
518 713 2.776765 CGCATGTCGTTAGTCGTTAGAG 59.223 50.000 0.00 0.00 40.80 2.43
519 714 2.777494 CGCATGTCGTTAGTCGTTAGA 58.223 47.619 0.00 0.00 40.80 2.10
614 818 2.798501 CGGCAGTGCGTGTTATCCG 61.799 63.158 9.45 0.00 0.00 4.18
615 819 1.740296 ACGGCAGTGCGTGTTATCC 60.740 57.895 9.45 0.00 0.00 2.59
616 820 1.419922 CACGGCAGTGCGTGTTATC 59.580 57.895 23.26 4.08 41.94 1.75
617 821 3.561429 CACGGCAGTGCGTGTTAT 58.439 55.556 23.26 0.10 41.94 1.89
651 855 1.718757 ATGGACGGCTCGTACGTACC 61.719 60.000 19.67 16.13 44.60 3.34
709 939 9.717942 ATGCTCTTTCGAAGAAAAGCTATATAT 57.282 29.630 17.93 0.00 45.90 0.86
710 940 8.982685 CATGCTCTTTCGAAGAAAAGCTATATA 58.017 33.333 17.93 4.63 45.90 0.86
713 943 5.065731 CCATGCTCTTTCGAAGAAAAGCTAT 59.934 40.000 17.93 10.68 45.90 2.97
776 1017 1.063806 CTGAGCGAAACGACTCTTGG 58.936 55.000 0.00 0.00 33.64 3.61
822 1063 3.599285 CTTGGTTCCCGCGCCTGTA 62.599 63.158 0.00 0.00 0.00 2.74
835 1076 0.674534 GTGAGTCACGAGTCCTTGGT 59.325 55.000 7.68 0.00 0.00 3.67
897 1142 1.198637 GTCATGTCACAGAAGCTTGCC 59.801 52.381 2.10 0.00 0.00 4.52
979 2884 1.117994 GGCCTGGTGGGTAGTACTAC 58.882 60.000 22.53 22.53 37.43 2.73
982 2887 1.600638 GTGGCCTGGTGGGTAGTAC 59.399 63.158 3.32 0.00 37.43 2.73
984 2889 2.933834 GGTGGCCTGGTGGGTAGT 60.934 66.667 3.32 0.00 37.43 2.73
985 2890 2.933287 TGGTGGCCTGGTGGGTAG 60.933 66.667 3.32 0.00 37.43 3.18
986 2891 3.253838 GTGGTGGCCTGGTGGGTA 61.254 66.667 3.32 0.00 37.43 3.69
989 2894 3.944250 GATGGTGGTGGCCTGGTGG 62.944 68.421 3.32 0.00 0.00 4.61
990 2895 2.361610 GATGGTGGTGGCCTGGTG 60.362 66.667 3.32 0.00 0.00 4.17
991 2896 4.033776 CGATGGTGGTGGCCTGGT 62.034 66.667 3.32 0.00 0.00 4.00
992 2897 3.976701 GACGATGGTGGTGGCCTGG 62.977 68.421 3.32 0.00 0.00 4.45
993 2898 2.436646 GACGATGGTGGTGGCCTG 60.437 66.667 3.32 0.00 0.00 4.85
994 2899 4.082523 CGACGATGGTGGTGGCCT 62.083 66.667 3.32 0.00 0.00 5.19
995 2900 4.388499 ACGACGATGGTGGTGGCC 62.388 66.667 0.00 0.00 33.52 5.36
1045 2950 2.045634 GGTGATGCTGCTGCTGGA 60.046 61.111 17.00 5.90 40.48 3.86
1131 3067 0.524392 CGATCGACCACTCTCTGTGC 60.524 60.000 10.26 0.00 44.92 4.57
1554 3506 1.553308 GCGAAGACGTTATACCGCTT 58.447 50.000 12.17 0.00 41.98 4.68
1942 4014 3.691342 CGAGGCACCGGTTCTCCA 61.691 66.667 22.12 0.00 0.00 3.86
2172 4250 4.184629 AGGTGAAAAAGTATAGCGAGCTG 58.815 43.478 7.99 0.00 0.00 4.24
2193 4271 7.481798 GGTTACGAGCTTCATCATGTTAAAAAG 59.518 37.037 0.00 0.00 0.00 2.27
2199 4277 3.937814 TGGTTACGAGCTTCATCATGTT 58.062 40.909 0.00 0.00 0.00 2.71
2200 4278 3.610040 TGGTTACGAGCTTCATCATGT 57.390 42.857 0.00 0.00 0.00 3.21
2201 4279 5.065090 TGAATTGGTTACGAGCTTCATCATG 59.935 40.000 0.00 0.00 0.00 3.07
2204 4282 5.545658 TTGAATTGGTTACGAGCTTCATC 57.454 39.130 0.00 0.00 0.00 2.92
2206 4284 4.819630 AGTTTGAATTGGTTACGAGCTTCA 59.180 37.500 0.00 0.00 0.00 3.02
2207 4285 5.358298 AGTTTGAATTGGTTACGAGCTTC 57.642 39.130 0.00 0.00 0.00 3.86
2208 4286 7.174253 TGAATAGTTTGAATTGGTTACGAGCTT 59.826 33.333 0.00 0.00 0.00 3.74
2209 4287 6.653320 TGAATAGTTTGAATTGGTTACGAGCT 59.347 34.615 0.00 0.00 0.00 4.09
2210 4288 6.837992 TGAATAGTTTGAATTGGTTACGAGC 58.162 36.000 0.00 0.00 0.00 5.03
2236 4314 4.102649 GCTTGTGTTGCGAGTTACTTTTT 58.897 39.130 0.00 0.00 0.00 1.94
2237 4315 3.127895 TGCTTGTGTTGCGAGTTACTTTT 59.872 39.130 0.00 0.00 0.00 2.27
2239 4317 2.031683 GTGCTTGTGTTGCGAGTTACTT 59.968 45.455 0.00 0.00 0.00 2.24
2240 4318 1.597663 GTGCTTGTGTTGCGAGTTACT 59.402 47.619 0.00 0.00 0.00 2.24
2241 4319 1.597663 AGTGCTTGTGTTGCGAGTTAC 59.402 47.619 0.00 0.00 0.00 2.50
2244 4322 0.179073 AGAGTGCTTGTGTTGCGAGT 60.179 50.000 0.00 0.00 0.00 4.18
2245 4323 0.940126 AAGAGTGCTTGTGTTGCGAG 59.060 50.000 0.00 0.00 31.83 5.03
2246 4324 1.378531 AAAGAGTGCTTGTGTTGCGA 58.621 45.000 0.00 0.00 33.79 5.10
2247 4325 2.193306 AAAAGAGTGCTTGTGTTGCG 57.807 45.000 0.00 0.00 33.79 4.85
2270 4503 2.159393 TGCTTGCTTTGTGATATTCGCC 60.159 45.455 0.00 0.00 0.00 5.54
2275 4508 7.661040 ACTTTAAAGTGCTTGCTTTGTGATAT 58.339 30.769 19.94 0.00 38.89 1.63
2278 4511 5.323371 ACTTTAAAGTGCTTGCTTTGTGA 57.677 34.783 19.94 0.00 38.89 3.58
2279 4512 5.807011 AGAACTTTAAAGTGCTTGCTTTGTG 59.193 36.000 21.35 0.00 42.36 3.33
2280 4513 5.965922 AGAACTTTAAAGTGCTTGCTTTGT 58.034 33.333 21.35 2.52 42.36 2.83
2281 4514 7.985634 TTAGAACTTTAAAGTGCTTGCTTTG 57.014 32.000 29.67 0.00 42.36 2.77
2282 4515 8.996024 TTTTAGAACTTTAAAGTGCTTGCTTT 57.004 26.923 29.67 10.76 42.36 3.51
2283 4516 8.996024 TTTTTAGAACTTTAAAGTGCTTGCTT 57.004 26.923 29.67 11.42 42.36 3.91
2310 5518 5.373222 TCTCTTGTAAAGTGCTTGCCTTTA 58.627 37.500 10.17 10.17 46.34 1.85
2311 5519 4.207165 TCTCTTGTAAAGTGCTTGCCTTT 58.793 39.130 11.58 11.58 46.34 3.11
2312 5520 3.820557 TCTCTTGTAAAGTGCTTGCCTT 58.179 40.909 0.00 0.00 46.34 4.35
2313 5521 3.492102 TCTCTTGTAAAGTGCTTGCCT 57.508 42.857 0.00 0.00 46.34 4.75
2314 5522 4.773323 AATCTCTTGTAAAGTGCTTGCC 57.227 40.909 0.00 0.00 46.34 4.52
2389 5599 1.544691 ACGTCAGACACCATGACCTAC 59.455 52.381 0.41 0.00 43.36 3.18
2394 5604 0.888619 GGAGACGTCAGACACCATGA 59.111 55.000 19.50 0.00 0.00 3.07
2398 5608 0.674534 AGTTGGAGACGTCAGACACC 59.325 55.000 19.50 12.59 0.00 4.16
2404 5614 2.927580 GCCCGAGTTGGAGACGTCA 61.928 63.158 19.50 0.00 42.00 4.35
2405 5615 2.126031 GCCCGAGTTGGAGACGTC 60.126 66.667 7.70 7.70 42.00 4.34
2406 5616 2.600769 AGCCCGAGTTGGAGACGT 60.601 61.111 0.00 0.00 42.00 4.34
2415 5625 0.397816 AGATTAGAGGCAGCCCGAGT 60.398 55.000 8.22 0.00 35.76 4.18
2418 5628 0.033228 CTCAGATTAGAGGCAGCCCG 59.967 60.000 8.22 0.00 35.76 6.13
2444 5654 9.376075 GACTGAGATTTGAAGATCATGTTTCTA 57.624 33.333 0.00 0.00 0.00 2.10
2446 5656 7.063898 TCGACTGAGATTTGAAGATCATGTTTC 59.936 37.037 0.00 0.00 0.00 2.78
2448 5658 6.312426 GTCGACTGAGATTTGAAGATCATGTT 59.688 38.462 8.70 0.00 0.00 2.71
2451 5661 6.041511 CAGTCGACTGAGATTTGAAGATCAT 58.958 40.000 36.73 0.00 46.59 2.45
2452 5662 5.405797 CAGTCGACTGAGATTTGAAGATCA 58.594 41.667 36.73 0.00 46.59 2.92
2453 5663 5.947503 CAGTCGACTGAGATTTGAAGATC 57.052 43.478 36.73 0.00 46.59 2.75
2467 5677 4.328536 ACATCACTAAGACTCAGTCGACT 58.671 43.478 13.58 13.58 37.67 4.18
2468 5678 4.688511 ACATCACTAAGACTCAGTCGAC 57.311 45.455 7.70 7.70 37.67 4.20
2469 5679 8.678593 ATATAACATCACTAAGACTCAGTCGA 57.321 34.615 0.00 0.00 37.67 4.20
2470 5680 9.388346 GAATATAACATCACTAAGACTCAGTCG 57.612 37.037 0.00 0.00 37.67 4.18
2497 5707 8.363390 TGCTCGAATCTTCACATAAGATCTTAT 58.637 33.333 20.20 20.20 36.07 1.73
2498 5708 7.716612 TGCTCGAATCTTCACATAAGATCTTA 58.283 34.615 17.32 17.32 36.07 2.10
2499 5709 6.577103 TGCTCGAATCTTCACATAAGATCTT 58.423 36.000 13.56 13.56 36.07 2.40
2500 5710 6.154203 TGCTCGAATCTTCACATAAGATCT 57.846 37.500 1.00 0.00 36.07 2.75
2501 5711 6.834959 TTGCTCGAATCTTCACATAAGATC 57.165 37.500 1.00 0.00 36.07 2.75
2502 5712 7.615582 TTTTGCTCGAATCTTCACATAAGAT 57.384 32.000 0.00 0.00 38.55 2.40
2503 5713 7.615582 ATTTTGCTCGAATCTTCACATAAGA 57.384 32.000 0.00 0.00 0.00 2.10
2504 5714 8.679288 AAATTTTGCTCGAATCTTCACATAAG 57.321 30.769 0.00 0.00 0.00 1.73
2505 5715 8.514594 AGAAATTTTGCTCGAATCTTCACATAA 58.485 29.630 0.00 0.00 0.00 1.90
2506 5716 8.044060 AGAAATTTTGCTCGAATCTTCACATA 57.956 30.769 0.00 0.00 0.00 2.29
2507 5717 6.917533 AGAAATTTTGCTCGAATCTTCACAT 58.082 32.000 0.00 0.00 0.00 3.21
2508 5718 6.317789 AGAAATTTTGCTCGAATCTTCACA 57.682 33.333 0.00 0.00 0.00 3.58
2509 5719 7.629027 AAAGAAATTTTGCTCGAATCTTCAC 57.371 32.000 0.00 0.00 0.00 3.18
2510 5720 8.647143 AAAAAGAAATTTTGCTCGAATCTTCA 57.353 26.923 0.00 0.00 39.73 3.02
2512 5722 8.703336 GCTAAAAAGAAATTTTGCTCGAATCTT 58.297 29.630 0.00 0.00 41.29 2.40
2513 5723 8.084684 AGCTAAAAAGAAATTTTGCTCGAATCT 58.915 29.630 3.50 0.00 41.29 2.40
2514 5724 8.232497 AGCTAAAAAGAAATTTTGCTCGAATC 57.768 30.769 3.50 0.00 41.29 2.52
2515 5725 8.593492 AAGCTAAAAAGAAATTTTGCTCGAAT 57.407 26.923 8.66 0.00 40.86 3.34
2516 5726 8.419076 AAAGCTAAAAAGAAATTTTGCTCGAA 57.581 26.923 8.66 0.00 40.86 3.71
2517 5727 8.419076 AAAAGCTAAAAAGAAATTTTGCTCGA 57.581 26.923 8.66 0.00 40.86 4.04
2518 5728 8.542953 AGAAAAGCTAAAAAGAAATTTTGCTCG 58.457 29.630 8.66 0.00 40.86 5.03
2535 5745 9.559732 TGCATAGCATATAAAGAAGAAAAGCTA 57.440 29.630 0.00 0.00 36.62 3.32
2536 5746 8.455903 TGCATAGCATATAAAGAAGAAAAGCT 57.544 30.769 0.00 0.00 31.71 3.74
2537 5747 8.962111 GTTGCATAGCATATAAAGAAGAAAAGC 58.038 33.333 0.00 0.00 38.76 3.51
2538 5748 9.455847 GGTTGCATAGCATATAAAGAAGAAAAG 57.544 33.333 0.00 0.00 38.76 2.27
2539 5749 9.189156 AGGTTGCATAGCATATAAAGAAGAAAA 57.811 29.630 0.00 0.00 38.76 2.29
2540 5750 8.623903 CAGGTTGCATAGCATATAAAGAAGAAA 58.376 33.333 0.00 0.00 38.76 2.52
2541 5751 7.992608 TCAGGTTGCATAGCATATAAAGAAGAA 59.007 33.333 0.00 0.00 38.76 2.52
2542 5752 7.442364 GTCAGGTTGCATAGCATATAAAGAAGA 59.558 37.037 0.00 0.00 38.76 2.87
2543 5753 7.443575 AGTCAGGTTGCATAGCATATAAAGAAG 59.556 37.037 0.00 0.00 38.76 2.85
2544 5754 7.227314 CAGTCAGGTTGCATAGCATATAAAGAA 59.773 37.037 0.00 0.00 38.76 2.52
2545 5755 6.707608 CAGTCAGGTTGCATAGCATATAAAGA 59.292 38.462 0.00 0.00 38.76 2.52
2546 5756 6.707608 TCAGTCAGGTTGCATAGCATATAAAG 59.292 38.462 0.00 0.00 38.76 1.85
2547 5757 6.591001 TCAGTCAGGTTGCATAGCATATAAA 58.409 36.000 0.00 0.00 38.76 1.40
2548 5758 6.041979 TCTCAGTCAGGTTGCATAGCATATAA 59.958 38.462 0.00 0.00 38.76 0.98
2549 5759 5.539955 TCTCAGTCAGGTTGCATAGCATATA 59.460 40.000 0.00 0.00 38.76 0.86
2550 5760 4.346127 TCTCAGTCAGGTTGCATAGCATAT 59.654 41.667 0.00 0.00 38.76 1.78
2551 5761 3.706086 TCTCAGTCAGGTTGCATAGCATA 59.294 43.478 0.00 0.00 38.76 3.14
2552 5762 2.502947 TCTCAGTCAGGTTGCATAGCAT 59.497 45.455 0.00 0.00 38.76 3.79
2553 5763 1.901833 TCTCAGTCAGGTTGCATAGCA 59.098 47.619 0.00 0.00 36.47 3.49
2554 5764 2.093764 AGTCTCAGTCAGGTTGCATAGC 60.094 50.000 0.00 0.00 0.00 2.97
2555 5765 3.883830 AGTCTCAGTCAGGTTGCATAG 57.116 47.619 0.00 0.00 0.00 2.23
2556 5766 3.306989 CCAAGTCTCAGTCAGGTTGCATA 60.307 47.826 0.00 0.00 0.00 3.14
2557 5767 2.551721 CCAAGTCTCAGTCAGGTTGCAT 60.552 50.000 0.00 0.00 0.00 3.96
2558 5768 1.202687 CCAAGTCTCAGTCAGGTTGCA 60.203 52.381 0.00 0.00 0.00 4.08
2559 5769 1.202698 ACCAAGTCTCAGTCAGGTTGC 60.203 52.381 0.00 0.00 0.00 4.17
2560 5770 2.918712 ACCAAGTCTCAGTCAGGTTG 57.081 50.000 0.00 0.00 0.00 3.77
2561 5771 4.409247 ACTTAACCAAGTCTCAGTCAGGTT 59.591 41.667 0.00 0.00 41.25 3.50
2562 5772 3.967987 ACTTAACCAAGTCTCAGTCAGGT 59.032 43.478 0.00 0.00 41.25 4.00
2563 5773 4.608948 ACTTAACCAAGTCTCAGTCAGG 57.391 45.455 0.00 0.00 41.25 3.86
2564 5774 8.524487 ACTTATACTTAACCAAGTCTCAGTCAG 58.476 37.037 0.00 0.00 44.04 3.51
2565 5775 8.418597 ACTTATACTTAACCAAGTCTCAGTCA 57.581 34.615 0.00 0.00 44.04 3.41
2566 5776 7.697291 CGACTTATACTTAACCAAGTCTCAGTC 59.303 40.741 10.55 6.96 44.04 3.51
2567 5777 7.392673 TCGACTTATACTTAACCAAGTCTCAGT 59.607 37.037 10.55 0.00 44.04 3.41
2568 5778 7.697291 GTCGACTTATACTTAACCAAGTCTCAG 59.303 40.741 8.70 0.00 44.04 3.35
2569 5779 7.392673 AGTCGACTTATACTTAACCAAGTCTCA 59.607 37.037 13.58 0.00 44.04 3.27
2570 5780 7.760437 AGTCGACTTATACTTAACCAAGTCTC 58.240 38.462 13.58 5.13 44.04 3.36
2571 5781 7.700022 AGTCGACTTATACTTAACCAAGTCT 57.300 36.000 13.58 0.00 44.04 3.24
2572 5782 9.500864 CTTAGTCGACTTATACTTAACCAAGTC 57.499 37.037 25.44 3.76 44.04 3.01
2573 5783 9.236006 TCTTAGTCGACTTATACTTAACCAAGT 57.764 33.333 25.44 0.00 46.77 3.16
2574 5784 9.500864 GTCTTAGTCGACTTATACTTAACCAAG 57.499 37.037 25.44 15.60 37.81 3.61
2575 5785 8.462016 GGTCTTAGTCGACTTATACTTAACCAA 58.538 37.037 25.44 6.11 34.38 3.67
2576 5786 7.831193 AGGTCTTAGTCGACTTATACTTAACCA 59.169 37.037 25.44 0.00 34.38 3.67
2577 5787 8.219546 AGGTCTTAGTCGACTTATACTTAACC 57.780 38.462 25.44 17.90 34.38 2.85
2579 5789 9.050601 GCTAGGTCTTAGTCGACTTATACTTAA 57.949 37.037 25.44 8.96 34.38 1.85
2580 5790 7.659390 GGCTAGGTCTTAGTCGACTTATACTTA 59.341 40.741 25.44 15.98 34.38 2.24
2581 5791 6.486320 GGCTAGGTCTTAGTCGACTTATACTT 59.514 42.308 25.44 15.70 34.38 2.24
2582 5792 5.997129 GGCTAGGTCTTAGTCGACTTATACT 59.003 44.000 25.44 17.09 34.38 2.12
2583 5793 5.762218 TGGCTAGGTCTTAGTCGACTTATAC 59.238 44.000 25.44 16.80 36.76 1.47
2584 5794 5.762218 GTGGCTAGGTCTTAGTCGACTTATA 59.238 44.000 25.44 4.21 36.76 0.98
2585 5795 4.579753 GTGGCTAGGTCTTAGTCGACTTAT 59.420 45.833 25.44 1.49 36.76 1.73
2586 5796 3.944015 GTGGCTAGGTCTTAGTCGACTTA 59.056 47.826 25.44 14.36 36.76 2.24
2587 5797 2.754002 GTGGCTAGGTCTTAGTCGACTT 59.246 50.000 25.44 6.93 36.76 3.01
2588 5798 2.290768 TGTGGCTAGGTCTTAGTCGACT 60.291 50.000 23.66 23.66 36.76 4.18
2589 5799 2.089980 TGTGGCTAGGTCTTAGTCGAC 58.910 52.381 7.70 7.70 36.76 4.20
2590 5800 2.089980 GTGTGGCTAGGTCTTAGTCGA 58.910 52.381 0.00 0.00 36.76 4.20
2591 5801 1.134560 GGTGTGGCTAGGTCTTAGTCG 59.865 57.143 0.00 0.00 36.76 4.18
2592 5802 1.481363 GGGTGTGGCTAGGTCTTAGTC 59.519 57.143 0.00 0.00 34.46 2.59
2593 5803 1.078989 AGGGTGTGGCTAGGTCTTAGT 59.921 52.381 0.00 0.00 0.00 2.24
2594 5804 1.757699 GAGGGTGTGGCTAGGTCTTAG 59.242 57.143 0.00 0.00 0.00 2.18
2595 5805 1.621622 GGAGGGTGTGGCTAGGTCTTA 60.622 57.143 0.00 0.00 0.00 2.10
2596 5806 0.910088 GGAGGGTGTGGCTAGGTCTT 60.910 60.000 0.00 0.00 0.00 3.01
2597 5807 1.306226 GGAGGGTGTGGCTAGGTCT 60.306 63.158 0.00 0.00 0.00 3.85
2598 5808 2.722201 CGGAGGGTGTGGCTAGGTC 61.722 68.421 0.00 0.00 0.00 3.85
2599 5809 2.683933 CGGAGGGTGTGGCTAGGT 60.684 66.667 0.00 0.00 0.00 3.08
2600 5810 2.363795 TCGGAGGGTGTGGCTAGG 60.364 66.667 0.00 0.00 0.00 3.02
2601 5811 0.395311 TAGTCGGAGGGTGTGGCTAG 60.395 60.000 0.00 0.00 0.00 3.42
2602 5812 0.040058 TTAGTCGGAGGGTGTGGCTA 59.960 55.000 0.00 0.00 0.00 3.93
2603 5813 1.229082 TTAGTCGGAGGGTGTGGCT 60.229 57.895 0.00 0.00 0.00 4.75
2604 5814 1.079336 GTTAGTCGGAGGGTGTGGC 60.079 63.158 0.00 0.00 0.00 5.01
2605 5815 0.531200 GAGTTAGTCGGAGGGTGTGG 59.469 60.000 0.00 0.00 0.00 4.17
2606 5816 0.531200 GGAGTTAGTCGGAGGGTGTG 59.469 60.000 0.00 0.00 0.00 3.82
2607 5817 0.408700 AGGAGTTAGTCGGAGGGTGT 59.591 55.000 0.00 0.00 0.00 4.16
2608 5818 1.558233 AAGGAGTTAGTCGGAGGGTG 58.442 55.000 0.00 0.00 0.00 4.61
2609 5819 2.177734 GAAAGGAGTTAGTCGGAGGGT 58.822 52.381 0.00 0.00 0.00 4.34
2610 5820 2.458620 AGAAAGGAGTTAGTCGGAGGG 58.541 52.381 0.00 0.00 0.00 4.30
2611 5821 4.021368 TCAAAGAAAGGAGTTAGTCGGAGG 60.021 45.833 0.00 0.00 0.00 4.30
2612 5822 4.924462 GTCAAAGAAAGGAGTTAGTCGGAG 59.076 45.833 0.00 0.00 0.00 4.63
2613 5823 4.558095 CGTCAAAGAAAGGAGTTAGTCGGA 60.558 45.833 0.00 0.00 0.00 4.55
2614 5824 3.673809 CGTCAAAGAAAGGAGTTAGTCGG 59.326 47.826 0.00 0.00 0.00 4.79
2615 5825 3.121445 GCGTCAAAGAAAGGAGTTAGTCG 59.879 47.826 0.00 0.00 0.00 4.18
2616 5826 3.432592 GGCGTCAAAGAAAGGAGTTAGTC 59.567 47.826 0.00 0.00 0.00 2.59
2617 5827 3.400255 GGCGTCAAAGAAAGGAGTTAGT 58.600 45.455 0.00 0.00 0.00 2.24
2618 5828 2.412089 CGGCGTCAAAGAAAGGAGTTAG 59.588 50.000 0.00 0.00 0.00 2.34
2619 5829 2.409975 CGGCGTCAAAGAAAGGAGTTA 58.590 47.619 0.00 0.00 0.00 2.24
2620 5830 1.226746 CGGCGTCAAAGAAAGGAGTT 58.773 50.000 0.00 0.00 0.00 3.01
2621 5831 1.228657 GCGGCGTCAAAGAAAGGAGT 61.229 55.000 9.37 0.00 0.00 3.85
2622 5832 1.497722 GCGGCGTCAAAGAAAGGAG 59.502 57.895 9.37 0.00 0.00 3.69
2623 5833 2.314647 CGCGGCGTCAAAGAAAGGA 61.315 57.895 15.36 0.00 0.00 3.36
2624 5834 2.173382 CGCGGCGTCAAAGAAAGG 59.827 61.111 15.36 0.00 0.00 3.11
2625 5835 2.173382 CCGCGGCGTCAAAGAAAG 59.827 61.111 22.00 0.00 0.00 2.62
2626 5836 4.020378 GCCGCGGCGTCAAAGAAA 62.020 61.111 37.24 0.00 0.00 2.52
2649 5982 2.421424 GAGCAGACCATGGAAATGACAC 59.579 50.000 21.47 5.49 0.00 3.67
2657 5990 0.543277 GTGGATGAGCAGACCATGGA 59.457 55.000 21.47 0.00 36.09 3.41
2658 5991 0.812811 CGTGGATGAGCAGACCATGG 60.813 60.000 11.19 11.19 37.14 3.66
2662 5995 2.866762 GTTATTCGTGGATGAGCAGACC 59.133 50.000 0.00 0.00 0.00 3.85
2663 5996 2.866762 GGTTATTCGTGGATGAGCAGAC 59.133 50.000 0.00 0.00 0.00 3.51
2689 6022 3.238497 CCCACGACAGGTCACCCA 61.238 66.667 0.00 0.00 0.00 4.51
2696 6029 0.537188 AACTATGAGCCCACGACAGG 59.463 55.000 0.00 0.00 0.00 4.00
2698 6031 2.851263 AAAACTATGAGCCCACGACA 57.149 45.000 0.00 0.00 0.00 4.35
2705 6038 4.100189 TCTCTGAGCCTAAAACTATGAGCC 59.900 45.833 0.00 0.00 0.00 4.70
2706 6039 5.269505 TCTCTGAGCCTAAAACTATGAGC 57.730 43.478 0.00 0.00 0.00 4.26
2711 6044 6.561614 CAACGTATCTCTGAGCCTAAAACTA 58.438 40.000 0.00 0.00 0.00 2.24
2712 6045 5.411781 CAACGTATCTCTGAGCCTAAAACT 58.588 41.667 0.00 0.00 0.00 2.66
2713 6046 4.033014 GCAACGTATCTCTGAGCCTAAAAC 59.967 45.833 0.00 0.00 0.00 2.43
2715 6048 3.447586 AGCAACGTATCTCTGAGCCTAAA 59.552 43.478 0.00 0.00 0.00 1.85
2717 6050 2.619177 GAGCAACGTATCTCTGAGCCTA 59.381 50.000 0.00 0.00 0.00 3.93
2723 6056 2.428890 AGGAAGGAGCAACGTATCTCTG 59.571 50.000 14.21 0.00 0.00 3.35
2726 6059 1.757699 GGAGGAAGGAGCAACGTATCT 59.242 52.381 0.00 0.00 0.00 1.98
2730 6063 1.878656 CGAGGAGGAAGGAGCAACGT 61.879 60.000 0.00 0.00 0.00 3.99
2733 6066 0.251832 AGACGAGGAGGAAGGAGCAA 60.252 55.000 0.00 0.00 0.00 3.91
2759 6092 2.011881 GCTAGTCGATTCCGCTCGC 61.012 63.158 0.00 0.00 38.52 5.03
2764 6097 1.002684 AGTTAGCGCTAGTCGATTCCG 60.003 52.381 17.98 0.00 41.67 4.30
2801 6134 9.783256 AAAGATATAACGGTTTTGCTATTTGTC 57.217 29.630 0.00 0.00 0.00 3.18
2810 6143 6.373216 TGACCCTCAAAGATATAACGGTTTTG 59.627 38.462 0.00 0.00 0.00 2.44
2811 6144 6.373495 GTGACCCTCAAAGATATAACGGTTTT 59.627 38.462 0.00 0.00 0.00 2.43
2816 6149 6.106673 ACAAGTGACCCTCAAAGATATAACG 58.893 40.000 0.00 0.00 0.00 3.18
2828 6161 5.069119 AGGAATTTTCAAACAAGTGACCCTC 59.931 40.000 0.00 0.00 0.00 4.30
2845 6178 7.721399 ACAGTTGTAGAATTGACAGAGGAATTT 59.279 33.333 1.95 0.00 0.00 1.82
2862 6195 9.559958 GGATGAACATTGAATTAACAGTTGTAG 57.440 33.333 0.00 0.00 0.00 2.74
2863 6196 8.519526 GGGATGAACATTGAATTAACAGTTGTA 58.480 33.333 0.00 0.00 0.00 2.41
2864 6197 7.233348 AGGGATGAACATTGAATTAACAGTTGT 59.767 33.333 0.00 0.00 0.00 3.32
2906 6247 7.806180 AGCCTATAAGTTCATAGAATTGTGGT 58.194 34.615 0.00 0.00 31.24 4.16
3086 6429 4.283678 GACATCTCGGTCTAAGAACATCG 58.716 47.826 0.00 0.00 34.92 3.84
3108 6451 8.861101 CAACTTACAAGTTTCTTCTATCTACCG 58.139 37.037 4.61 0.00 46.52 4.02
3144 6487 8.892723 CATGAAGTGCACTTTAATGGAACTATA 58.107 33.333 31.58 2.99 36.11 1.31
3394 7333 7.224167 CGCGGAGTAAATAAAAATAGAAGGAGT 59.776 37.037 0.00 0.00 0.00 3.85
3395 7334 7.224167 ACGCGGAGTAAATAAAAATAGAAGGAG 59.776 37.037 12.47 0.00 0.00 3.69
3396 7335 7.043565 ACGCGGAGTAAATAAAAATAGAAGGA 58.956 34.615 12.47 0.00 0.00 3.36
3397 7336 7.242914 ACGCGGAGTAAATAAAAATAGAAGG 57.757 36.000 12.47 0.00 0.00 3.46
3409 7348 4.510340 CCAAAGCTAATACGCGGAGTAAAT 59.490 41.667 12.47 0.00 39.04 1.40
3411 7350 3.119029 ACCAAAGCTAATACGCGGAGTAA 60.119 43.478 12.47 0.00 39.04 2.24
3412 7351 2.428171 ACCAAAGCTAATACGCGGAGTA 59.572 45.455 12.47 4.11 40.03 2.59
3413 7352 1.206371 ACCAAAGCTAATACGCGGAGT 59.794 47.619 12.47 2.60 34.40 3.85
3414 7353 1.859080 GACCAAAGCTAATACGCGGAG 59.141 52.381 12.47 2.88 34.40 4.63
3415 7354 1.205179 TGACCAAAGCTAATACGCGGA 59.795 47.619 12.47 0.00 34.40 5.54
3416 7355 1.647346 TGACCAAAGCTAATACGCGG 58.353 50.000 12.47 0.00 34.40 6.46
3417 7356 3.733024 TTTGACCAAAGCTAATACGCG 57.267 42.857 3.53 3.53 34.40 6.01
3418 7357 5.636837 TGATTTTGACCAAAGCTAATACGC 58.363 37.500 0.00 0.00 31.55 4.42
3419 7358 8.687824 ATTTGATTTTGACCAAAGCTAATACG 57.312 30.769 0.00 0.00 35.37 3.06
3577 7516 9.151471 CTCCTAAAGTTTGATCAAATTCGTAGA 57.849 33.333 23.05 14.82 32.36 2.59
3578 7517 8.391106 CCTCCTAAAGTTTGATCAAATTCGTAG 58.609 37.037 23.05 20.03 32.36 3.51
3579 7518 7.881232 ACCTCCTAAAGTTTGATCAAATTCGTA 59.119 33.333 23.05 13.42 32.36 3.43
3581 7520 7.145932 ACCTCCTAAAGTTTGATCAAATTCG 57.854 36.000 23.05 10.72 32.36 3.34
3608 7547 7.201145 TCCGCATATAAGAGTTGACTAAAGTC 58.799 38.462 3.08 3.08 44.97 3.01
3609 7548 7.108841 TCCGCATATAAGAGTTGACTAAAGT 57.891 36.000 0.00 0.00 0.00 2.66
3610 7549 7.203910 ACTCCGCATATAAGAGTTGACTAAAG 58.796 38.462 0.00 0.00 37.60 1.85
3611 7550 7.108841 ACTCCGCATATAAGAGTTGACTAAA 57.891 36.000 0.00 0.00 37.60 1.85
3613 7552 7.812690 TTACTCCGCATATAAGAGTTGACTA 57.187 36.000 6.74 0.00 41.09 2.59
3615 7554 7.948278 ATTTACTCCGCATATAAGAGTTGAC 57.052 36.000 6.74 0.00 41.09 3.18
3620 7559 9.793245 CGTTTTTATTTACTCCGCATATAAGAG 57.207 33.333 0.00 0.00 0.00 2.85
3624 7563 8.767085 CCTTCGTTTTTATTTACTCCGCATATA 58.233 33.333 0.00 0.00 0.00 0.86
3625 7564 7.255001 CCCTTCGTTTTTATTTACTCCGCATAT 60.255 37.037 0.00 0.00 0.00 1.78
3627 7566 5.163693 CCCTTCGTTTTTATTTACTCCGCAT 60.164 40.000 0.00 0.00 0.00 4.73
3628 7567 4.154556 CCCTTCGTTTTTATTTACTCCGCA 59.845 41.667 0.00 0.00 0.00 5.69
3629 7568 4.392754 TCCCTTCGTTTTTATTTACTCCGC 59.607 41.667 0.00 0.00 0.00 5.54
3630 7569 5.640783 ACTCCCTTCGTTTTTATTTACTCCG 59.359 40.000 0.00 0.00 0.00 4.63
3631 7570 8.728337 ATACTCCCTTCGTTTTTATTTACTCC 57.272 34.615 0.00 0.00 0.00 3.85
3632 7571 9.597170 AGATACTCCCTTCGTTTTTATTTACTC 57.403 33.333 0.00 0.00 0.00 2.59
3633 7572 9.597170 GAGATACTCCCTTCGTTTTTATTTACT 57.403 33.333 0.00 0.00 0.00 2.24
3634 7573 8.824781 GGAGATACTCCCTTCGTTTTTATTTAC 58.175 37.037 6.54 0.00 44.36 2.01
3636 7575 7.860918 GGAGATACTCCCTTCGTTTTTATTT 57.139 36.000 6.54 0.00 44.36 1.40
3665 7604 3.250744 TGCGATGCTTGTGTTAGTCTAC 58.749 45.455 0.00 0.00 0.00 2.59
3674 7613 8.285394 AGTAATAAGATAATTGCGATGCTTGTG 58.715 33.333 7.05 0.00 0.00 3.33
3738 7753 9.656323 AATGTGGAGTATCTAATGAAGTAGGTA 57.344 33.333 0.00 0.00 33.73 3.08
3769 7784 3.560025 CCATATCACTTAGATGCCCACCC 60.560 52.174 0.00 0.00 37.57 4.61
3929 8368 5.008514 TGACACATGGAAATAACACACACAG 59.991 40.000 0.00 0.00 0.00 3.66
3931 9369 5.431420 TGACACATGGAAATAACACACAC 57.569 39.130 0.00 0.00 0.00 3.82
3945 9383 5.702865 CATCCTTGTAAACCTTGACACATG 58.297 41.667 0.00 0.00 0.00 3.21
3946 9384 4.218417 GCATCCTTGTAAACCTTGACACAT 59.782 41.667 0.00 0.00 0.00 3.21
4024 9462 3.192103 AAGTGGAAGGCCCCGACAC 62.192 63.158 0.00 4.02 0.00 3.67
4210 9651 5.671463 TCTCAGGGAAGATACTCAGGTAT 57.329 43.478 0.00 0.00 40.91 2.73
4318 9759 1.180029 TGTAGTACCTCCGTCCAAGC 58.820 55.000 0.00 0.00 0.00 4.01
4678 10122 4.275196 CCGATGTGCTTGAGATCATCATTT 59.725 41.667 0.00 0.00 37.89 2.32
4717 10161 0.606604 TTCGCAGACCAAGGTACCTC 59.393 55.000 16.64 2.35 34.32 3.85
4908 10352 1.133915 TGCCCGTTTCCTTGTTTCTCT 60.134 47.619 0.00 0.00 0.00 3.10
4911 10355 2.588027 TTTGCCCGTTTCCTTGTTTC 57.412 45.000 0.00 0.00 0.00 2.78
4922 10366 1.816224 GTCACCATTACATTTGCCCGT 59.184 47.619 0.00 0.00 0.00 5.28
4924 10368 1.480545 GGGTCACCATTACATTTGCCC 59.519 52.381 0.00 0.00 36.50 5.36
4963 10407 1.340211 CCATAGCACCCGGTAACCAAA 60.340 52.381 0.00 0.00 0.00 3.28
5161 10614 1.025812 CTTCCTCGGTCGCATCTACT 58.974 55.000 0.00 0.00 0.00 2.57
5198 10658 3.242870 CGAACAAGCCTTGATATTGAGCC 60.243 47.826 12.25 0.00 0.00 4.70
5224 10684 2.892334 GCGCACTTCAAGCCGTTCA 61.892 57.895 0.30 0.00 0.00 3.18
5553 11013 4.949238 CACCATCCTTGATTTGTATGGTCA 59.051 41.667 2.39 0.00 45.57 4.02
5746 11209 3.575965 ATAAACTTTGGGCGCTTCTTG 57.424 42.857 7.64 0.00 0.00 3.02
5758 11221 4.993028 TGGACCTGCCAGTAATAAACTTT 58.007 39.130 0.00 0.00 43.33 2.66
5775 11238 4.081917 GCTAGCTCCTAGATACAATGGACC 60.082 50.000 7.70 0.00 36.26 4.46
5794 11257 1.604755 CAGAGGTAGTGCGTAGGCTAG 59.395 57.143 9.11 0.00 40.82 3.42
5799 11262 2.747989 TCAGAACAGAGGTAGTGCGTAG 59.252 50.000 0.00 0.00 0.00 3.51
5805 11268 6.959904 TCTAGTACATCAGAACAGAGGTAGT 58.040 40.000 0.00 0.00 40.39 2.73
5824 11287 7.928307 AATAAACTTGTGTGCATCATCTAGT 57.072 32.000 0.00 0.00 0.00 2.57
5825 11288 8.453320 TCAAATAAACTTGTGTGCATCATCTAG 58.547 33.333 0.00 0.00 0.00 2.43
5826 11289 8.334263 TCAAATAAACTTGTGTGCATCATCTA 57.666 30.769 0.00 0.00 0.00 1.98
5867 11330 9.683069 CATGGCATTCCTATACAAAAATTACTC 57.317 33.333 0.00 0.00 0.00 2.59
5881 11362 9.956640 AAAAATTCAAAATACATGGCATTCCTA 57.043 25.926 0.00 0.00 0.00 2.94
5911 11392 3.618351 ACATGCCAGATCTTTCTTGGAG 58.382 45.455 2.22 0.00 0.00 3.86
5974 11458 1.287425 CCGGCTAATTTCCGTCAGAC 58.713 55.000 14.93 0.00 45.09 3.51
5978 11462 0.806241 TTTGCCGGCTAATTTCCGTC 59.194 50.000 29.70 5.72 45.09 4.79
6003 11487 4.557496 GCTTTGGAACTTGATCTTCACCAC 60.557 45.833 0.00 0.00 0.00 4.16
6023 11507 3.791245 TCACCAAGCAAAAATTTCGCTT 58.209 36.364 17.62 17.62 46.57 4.68
6118 11744 0.385974 ATCGTTTTGCTGCGTGCTTC 60.386 50.000 0.00 0.00 43.37 3.86
6224 11874 4.772100 AGTTTGTTATGGGTGCTGCTTAAT 59.228 37.500 0.00 0.00 0.00 1.40
6231 11881 3.073062 AGAGTGAGTTTGTTATGGGTGCT 59.927 43.478 0.00 0.00 0.00 4.40
6548 12235 1.876156 CCCTTGATGCCTTCTTATCGC 59.124 52.381 0.00 0.00 0.00 4.58
6558 12245 6.360370 TCAGTAATATCTACCCTTGATGCC 57.640 41.667 0.00 0.00 0.00 4.40
6589 12276 3.119352 TCTCTGAGAACATGTGGTCGATG 60.119 47.826 4.57 0.00 36.72 3.84
6600 12287 5.359194 ACTGTCCTTTTTCTCTGAGAACA 57.641 39.130 19.17 10.77 33.26 3.18
6602 12289 5.104527 TCCAACTGTCCTTTTTCTCTGAGAA 60.105 40.000 15.82 15.82 31.28 2.87
6673 12363 2.665000 CTGCCCCGAAGAAGAGCA 59.335 61.111 0.00 0.00 0.00 4.26
6675 12365 0.813210 GATGCTGCCCCGAAGAAGAG 60.813 60.000 0.00 0.00 0.00 2.85
6805 12498 0.397394 TATGCCAATGCCTGCACCAT 60.397 50.000 0.00 0.00 40.88 3.55
6807 12500 0.103572 CTTATGCCAATGCCTGCACC 59.896 55.000 0.00 0.00 40.88 5.01
6814 12507 1.655350 GACGCGCTTATGCCAATGC 60.655 57.895 5.73 0.00 35.36 3.56
6815 12508 0.098552 TTGACGCGCTTATGCCAATG 59.901 50.000 5.73 0.00 35.36 2.82
6832 12525 2.156917 TCTGCACTTTCAGAGGCATTG 58.843 47.619 0.00 0.00 38.11 2.82
6833 12526 2.574006 TCTGCACTTTCAGAGGCATT 57.426 45.000 0.00 0.00 38.11 3.56
6865 12559 1.457831 GGGGCACGTCTATCTCCCT 60.458 63.158 0.00 0.00 37.16 4.20
6913 12608 1.884464 CCATGTCACGGGATCGCAG 60.884 63.158 10.70 5.44 40.63 5.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.