Multiple sequence alignment - TraesCS5B01G303400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G303400 chr5B 100.000 6264 0 0 1 6264 487712837 487706574 0.000000e+00 11568.0
1 TraesCS5B01G303400 chr5B 88.333 360 31 3 744 1102 696005526 696005875 7.510000e-114 422.0
2 TraesCS5B01G303400 chr5B 83.690 374 60 1 5856 6228 313641108 313640735 9.990000e-93 351.0
3 TraesCS5B01G303400 chr5B 80.822 219 41 1 5855 6072 91821285 91821503 3.000000e-38 171.0
4 TraesCS5B01G303400 chr5D 94.781 4215 137 37 1 4169 406607143 406602966 0.000000e+00 6488.0
5 TraesCS5B01G303400 chr5D 94.746 1656 71 10 4202 5853 406602870 406601227 0.000000e+00 2562.0
6 TraesCS5B01G303400 chr5D 86.500 400 53 1 5859 6257 305909883 305909484 7.460000e-119 438.0
7 TraesCS5B01G303400 chr5D 73.770 366 90 6 5868 6228 198377622 198377258 8.470000e-29 139.0
8 TraesCS5B01G303400 chr5D 86.842 114 15 0 6131 6244 127361011 127360898 1.830000e-25 128.0
9 TraesCS5B01G303400 chr5A 93.441 4193 197 39 1 4157 512258548 512254398 0.000000e+00 6148.0
10 TraesCS5B01G303400 chr5A 93.651 1638 74 17 4228 5853 512254150 512252531 0.000000e+00 2422.0
11 TraesCS5B01G303400 chr7D 75.644 1010 211 23 979 1977 252267044 252266059 2.640000e-128 470.0
12 TraesCS5B01G303400 chr7D 76.573 922 149 52 4315 5214 252263948 252263072 1.600000e-120 444.0
13 TraesCS5B01G303400 chr7D 88.520 331 27 6 808 1137 565065797 565066117 2.120000e-104 390.0
14 TraesCS5B01G303400 chr7B 75.619 1009 213 23 979 1977 229097464 229096479 2.640000e-128 470.0
15 TraesCS5B01G303400 chr7B 76.004 921 156 50 4315 5214 229094452 229093576 3.490000e-112 416.0
16 TraesCS5B01G303400 chr1B 89.167 360 28 3 744 1102 655555775 655556124 7.460000e-119 438.0
17 TraesCS5B01G303400 chr1B 88.056 360 32 3 744 1102 113972146 113972495 3.490000e-112 416.0
18 TraesCS5B01G303400 chr1B 87.273 330 31 3 810 1138 586692994 586692675 3.570000e-97 366.0
19 TraesCS5B01G303400 chr1B 94.643 56 3 0 1194 1249 586692672 586692617 3.110000e-13 87.9
20 TraesCS5B01G303400 chr7A 88.889 360 29 3 744 1102 33681037 33680688 3.470000e-117 433.0
21 TraesCS5B01G303400 chr7A 87.915 331 29 4 808 1137 1173950 1173630 4.580000e-101 379.0
22 TraesCS5B01G303400 chr7A 75.163 922 168 48 4315 5214 268857278 268858160 1.650000e-100 377.0
23 TraesCS5B01G303400 chr6A 88.333 360 31 3 744 1102 77371540 77371889 7.510000e-114 422.0
24 TraesCS5B01G303400 chr6A 82.911 158 25 2 6073 6229 174006672 174006828 2.350000e-29 141.0
25 TraesCS5B01G303400 chr2A 87.812 361 32 4 744 1102 664901247 664901597 4.520000e-111 412.0
26 TraesCS5B01G303400 chr6B 87.778 360 33 3 744 1102 621062825 621062476 1.630000e-110 411.0
27 TraesCS5B01G303400 chr6B 74.219 384 90 6 5866 6243 401987066 401986686 1.090000e-32 152.0
28 TraesCS5B01G303400 chr6D 88.520 331 27 3 808 1137 440543287 440542967 2.120000e-104 390.0
29 TraesCS5B01G303400 chr6D 76.998 413 86 7 5851 6257 133859285 133859694 1.760000e-55 228.0
30 TraesCS5B01G303400 chr2B 88.218 331 28 4 808 1137 535684315 535684635 9.850000e-103 385.0
31 TraesCS5B01G303400 chr4D 79.653 403 75 5 5859 6257 349750963 349750564 3.700000e-72 283.0
32 TraesCS5B01G303400 chr4D 77.284 405 84 7 5859 6257 112261183 112260781 1.360000e-56 231.0
33 TraesCS5B01G303400 chr4D 76.658 407 89 5 5856 6257 254721674 254722079 2.940000e-53 220.0
34 TraesCS5B01G303400 chr4D 76.347 334 75 3 5856 6185 131718706 131719039 6.450000e-40 176.0
35 TraesCS5B01G303400 chr3D 76.650 394 76 15 5868 6251 296648177 296648564 2.960000e-48 204.0
36 TraesCS5B01G303400 chr1D 74.555 393 87 10 5867 6252 151527520 151527906 6.500000e-35 159.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G303400 chr5B 487706574 487712837 6263 True 11568 11568 100.0000 1 6264 1 chr5B.!!$R2 6263
1 TraesCS5B01G303400 chr5D 406601227 406607143 5916 True 4525 6488 94.7635 1 5853 2 chr5D.!!$R4 5852
2 TraesCS5B01G303400 chr5A 512252531 512258548 6017 True 4285 6148 93.5460 1 5853 2 chr5A.!!$R1 5852
3 TraesCS5B01G303400 chr7D 252263072 252267044 3972 True 457 470 76.1085 979 5214 2 chr7D.!!$R1 4235
4 TraesCS5B01G303400 chr7B 229093576 229097464 3888 True 443 470 75.8115 979 5214 2 chr7B.!!$R1 4235
5 TraesCS5B01G303400 chr7A 268857278 268858160 882 False 377 377 75.1630 4315 5214 1 chr7A.!!$F1 899

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
663 677 0.250038 CAGCGATGATAGGGGTGTGG 60.250 60.0 0.00 0.00 0.00 4.17 F
1399 1416 0.038892 CGGCAGCAAGAAAGCACAAT 60.039 50.0 0.00 0.00 36.85 2.71 F
1890 1907 0.676151 GAAGCTGGGAAGGAGCTGTG 60.676 60.0 0.00 0.00 46.32 3.66 F
3508 4230 0.107800 CTAGCTGTCCTGCATGCTGT 60.108 55.0 20.33 3.84 34.82 4.40 F
3977 4712 0.403655 TGTGGATGGCCTGCTGTTTA 59.596 50.0 3.32 0.00 34.31 2.01 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2326 2349 2.160721 AGGAGGATGCTTCTTCGGTA 57.839 50.000 5.76 0.0 22.99 4.02 R
2709 3143 1.437573 CACCTGCGCCGATTCTCTA 59.562 57.895 4.18 0.0 0.00 2.43 R
3720 4445 0.101399 TGACAATTTTTGCACGCCGT 59.899 45.000 0.00 0.0 0.00 5.68 R
4515 5471 0.309302 CTCATCGTCCGTAGCAGAGG 59.691 60.000 0.00 0.0 0.00 3.69 R
5903 6893 0.179018 ACAGAAGCCTTGGCGAACTT 60.179 50.000 5.95 0.0 0.00 2.66 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
428 442 2.751837 GCTTTCCCCTTCCCTGCG 60.752 66.667 0.00 0.00 0.00 5.18
439 453 1.002033 CTTCCCTGCGCTGCATAATTC 60.002 52.381 9.73 0.00 38.13 2.17
451 465 2.754552 TGCATAATTCAGTTCCTGGCAC 59.245 45.455 0.00 0.00 31.51 5.01
453 467 2.107950 TAATTCAGTTCCTGGCACCG 57.892 50.000 0.00 0.00 31.51 4.94
455 469 1.779061 ATTCAGTTCCTGGCACCGGT 61.779 55.000 0.00 0.00 31.51 5.28
461 475 1.833787 TTCCTGGCACCGGTAGTTCC 61.834 60.000 6.87 7.12 31.39 3.62
462 476 2.291043 CCTGGCACCGGTAGTTCCT 61.291 63.158 6.87 0.00 32.13 3.36
465 479 2.345991 GCACCGGTAGTTCCTGCA 59.654 61.111 6.87 0.00 37.35 4.41
468 482 1.935933 CACCGGTAGTTCCTGCATAC 58.064 55.000 6.87 0.00 0.00 2.39
469 483 1.206132 CACCGGTAGTTCCTGCATACA 59.794 52.381 6.87 0.00 0.00 2.29
470 484 2.116238 ACCGGTAGTTCCTGCATACAT 58.884 47.619 4.49 0.00 0.00 2.29
471 485 3.069016 CACCGGTAGTTCCTGCATACATA 59.931 47.826 6.87 0.00 0.00 2.29
472 486 3.707611 ACCGGTAGTTCCTGCATACATAA 59.292 43.478 4.49 0.00 0.00 1.90
474 488 4.929808 CCGGTAGTTCCTGCATACATAATC 59.070 45.833 0.00 0.00 0.00 1.75
475 489 4.621460 CGGTAGTTCCTGCATACATAATCG 59.379 45.833 0.00 0.00 0.00 3.34
476 490 5.539048 GGTAGTTCCTGCATACATAATCGT 58.461 41.667 0.00 0.00 0.00 3.73
477 491 5.989777 GGTAGTTCCTGCATACATAATCGTT 59.010 40.000 0.00 0.00 0.00 3.85
478 492 6.482308 GGTAGTTCCTGCATACATAATCGTTT 59.518 38.462 0.00 0.00 0.00 3.60
479 493 7.654520 GGTAGTTCCTGCATACATAATCGTTTA 59.345 37.037 0.00 0.00 0.00 2.01
480 494 9.204570 GTAGTTCCTGCATACATAATCGTTTAT 57.795 33.333 0.00 0.00 0.00 1.40
532 546 3.195825 ACTGCTACTGTTGGATAGGTGTC 59.804 47.826 0.00 0.00 0.00 3.67
591 605 6.764308 ATCACTGAAATTATTGGGTCACAG 57.236 37.500 0.00 0.00 0.00 3.66
605 619 2.440409 GTCACAGGCACCAATGATTCT 58.560 47.619 0.00 0.00 0.00 2.40
616 630 1.667724 CAATGATTCTGTGGAGCCGTC 59.332 52.381 0.00 0.00 0.00 4.79
619 633 1.613630 ATTCTGTGGAGCCGTCCCT 60.614 57.895 0.00 0.00 43.15 4.20
633 647 6.544931 GGAGCCGTCCCTTTTTAATAACTATT 59.455 38.462 0.00 0.00 36.76 1.73
636 650 7.612633 AGCCGTCCCTTTTTAATAACTATTGAA 59.387 33.333 0.00 0.00 0.00 2.69
637 651 8.245491 GCCGTCCCTTTTTAATAACTATTGAAA 58.755 33.333 0.00 0.00 31.84 2.69
663 677 0.250038 CAGCGATGATAGGGGTGTGG 60.250 60.000 0.00 0.00 0.00 4.17
707 721 7.939039 TGAATCCATATCCAGTGATTAAACTCC 59.061 37.037 0.00 0.00 32.18 3.85
780 794 1.222567 AGTTCCTTGTGACCCAGGTT 58.777 50.000 0.00 0.00 0.00 3.50
818 835 5.664294 TCATGAAAAGTTGCAGCCATTAT 57.336 34.783 0.00 0.00 0.00 1.28
835 852 6.440328 AGCCATTATTGTAACCAGGTTCATTT 59.560 34.615 8.57 0.00 0.00 2.32
860 877 1.115326 ACTTTTGAACAGGGGCAGCC 61.115 55.000 1.26 1.26 0.00 4.85
861 878 2.146073 CTTTTGAACAGGGGCAGCCG 62.146 60.000 5.00 0.00 0.00 5.52
900 917 7.119699 CCAGCAGTGAATTGATAACTAACTCAA 59.880 37.037 0.00 0.00 35.95 3.02
910 927 6.346096 TGATAACTAACTCAACCACATAGGC 58.654 40.000 0.00 0.00 43.14 3.93
1113 1130 1.965930 GGTCGTCAGCATTGTGCCA 60.966 57.895 0.00 0.00 46.52 4.92
1185 1202 2.395690 GATTCTTCGCACGCCACG 59.604 61.111 0.00 0.00 0.00 4.94
1191 1208 0.799152 CTTCGCACGCCACGTATGTA 60.799 55.000 0.00 0.00 38.32 2.29
1399 1416 0.038892 CGGCAGCAAGAAAGCACAAT 60.039 50.000 0.00 0.00 36.85 2.71
1504 1521 1.931635 TAATGCTCCCCACAAAACCC 58.068 50.000 0.00 0.00 0.00 4.11
1890 1907 0.676151 GAAGCTGGGAAGGAGCTGTG 60.676 60.000 0.00 0.00 46.32 3.66
1986 2003 9.807649 CCAACGGTATGTACTATTTTTACTACT 57.192 33.333 0.00 0.00 0.00 2.57
2156 2173 7.446931 TGATGGCACTGTTTCTTTCTATAAACA 59.553 33.333 0.00 0.00 41.86 2.83
2326 2349 1.344438 TCCAGTCGATGCTGACAAAGT 59.656 47.619 4.68 0.00 41.41 2.66
2602 2923 5.344743 ACACTACCACCAATGTCTATGAG 57.655 43.478 0.00 0.00 0.00 2.90
2636 2957 2.886523 CTGTCCATTGCCTGTGAGAAAA 59.113 45.455 0.00 0.00 0.00 2.29
2649 2970 7.277539 TGCCTGTGAGAAAATTTGTTGTAAAAG 59.722 33.333 0.00 0.00 0.00 2.27
2709 3143 3.834813 TGTGACAGGAGCTTCTGAAGTAT 59.165 43.478 29.27 5.26 38.11 2.12
2757 3191 0.251474 AAGCCATGCAGGAAGCTTCA 60.251 50.000 27.02 8.42 41.60 3.02
2797 3231 6.574465 GCTGAGATGTTTGAGGTACCTTTCTA 60.574 42.308 17.53 2.57 0.00 2.10
2872 3313 3.213506 TCGTTGCTATGATTTCCATGGG 58.786 45.455 13.02 0.00 36.71 4.00
2931 3629 4.998671 TTGCAACTCATTTTGGACAGAA 57.001 36.364 0.00 0.00 0.00 3.02
2932 3630 4.305989 TGCAACTCATTTTGGACAGAAC 57.694 40.909 0.00 0.00 0.00 3.01
2933 3631 3.698539 TGCAACTCATTTTGGACAGAACA 59.301 39.130 0.00 0.00 0.00 3.18
2934 3632 4.202040 TGCAACTCATTTTGGACAGAACAG 60.202 41.667 0.00 0.00 0.00 3.16
2958 3656 8.446273 CAGACATAGTTTCCAGAAAATAGTGTG 58.554 37.037 14.45 12.21 34.87 3.82
2967 3665 4.919168 CCAGAAAATAGTGTGTGCATGTTG 59.081 41.667 0.00 0.00 0.00 3.33
2983 3683 7.037438 GTGCATGTTGAATACTTTGATGGAAT 58.963 34.615 0.00 0.00 0.00 3.01
3092 3793 2.042686 TCCAAGCATGCACAGATACC 57.957 50.000 21.98 0.00 0.00 2.73
3120 3821 8.007821 AGCAAATACGATTCTATCAACATACG 57.992 34.615 0.00 0.00 0.00 3.06
3122 3823 7.359264 GCAAATACGATTCTATCAACATACGCT 60.359 37.037 0.00 0.00 0.00 5.07
3196 3918 6.520272 CCAATGTTTTTGAAATCCTACCACA 58.480 36.000 0.00 0.00 0.00 4.17
3315 4037 1.242076 GACTGCATGTTCCTGTGCTT 58.758 50.000 0.00 0.00 41.78 3.91
3317 4039 3.012518 GACTGCATGTTCCTGTGCTTAT 58.987 45.455 0.00 0.00 41.78 1.73
3423 4145 0.961019 TGTGACATGCTTCCTTTGCC 59.039 50.000 0.00 0.00 0.00 4.52
3508 4230 0.107800 CTAGCTGTCCTGCATGCTGT 60.108 55.000 20.33 3.84 34.82 4.40
3536 4258 0.901827 TTGCTATCAACCCAGCTCGA 59.098 50.000 0.00 0.00 38.63 4.04
3556 4279 1.001641 CTGCCCTTTGAGACCCCAG 60.002 63.158 0.00 0.00 0.00 4.45
3624 4349 3.255642 TGGAACCTAGCTGCATTGTTTTC 59.744 43.478 1.02 0.00 0.00 2.29
3720 4445 7.119699 CACAGCTGAAGTTCATAACCATCTTAA 59.880 37.037 23.35 0.00 0.00 1.85
3847 4573 3.958822 AAGTAACGAGACGCGCGGG 62.959 63.158 35.22 22.69 46.04 6.13
3901 4636 5.072600 AGGGTATTAACCTTGACACTCACAA 59.927 40.000 0.00 0.00 45.95 3.33
3919 4654 6.991531 ACTCACAATGTTTTGGTTTGCATATT 59.008 30.769 0.00 0.00 37.15 1.28
3977 4712 0.403655 TGTGGATGGCCTGCTGTTTA 59.596 50.000 3.32 0.00 34.31 2.01
4010 4770 0.880278 ACTGTACTTGCACCTGCGTG 60.880 55.000 0.00 0.00 45.83 5.34
4145 4906 6.928492 TCACTCAAATGCTGGAAAATTTTACC 59.072 34.615 10.68 10.67 0.00 2.85
4151 4912 5.523438 TGCTGGAAAATTTTACCGTCTTT 57.477 34.783 10.68 0.00 0.00 2.52
4186 4972 1.821753 GTTAGCTCCTGACTCTGCAGA 59.178 52.381 17.19 17.19 38.14 4.26
4220 5059 3.365565 GGTTTTACTGCACGGTTACCATG 60.366 47.826 1.13 0.00 0.00 3.66
4221 5060 2.102070 TTACTGCACGGTTACCATGG 57.898 50.000 11.19 11.19 0.00 3.66
4225 5064 2.112815 GCACGGTTACCATGGGAGC 61.113 63.158 18.09 10.02 0.00 4.70
4226 5164 1.451387 CACGGTTACCATGGGAGCC 60.451 63.158 19.93 19.93 0.00 4.70
4236 5174 1.078426 ATGGGAGCCGTACACTTGC 60.078 57.895 0.00 0.00 0.00 4.01
4280 5218 9.573133 GTGATTTTGCTTGTATTTTAGCTGTAT 57.427 29.630 0.00 0.00 38.22 2.29
4304 5242 6.993786 TTCATAATTTGAGTAATGTGGCGA 57.006 33.333 0.00 0.00 35.27 5.54
4305 5243 6.358118 TCATAATTTGAGTAATGTGGCGAC 57.642 37.500 0.00 0.00 0.00 5.19
4321 5259 4.391830 GTGGCGACATTGATTCTTACTTGA 59.608 41.667 0.00 0.00 46.14 3.02
4372 5310 3.444805 GAGGTGAGCTCGACGGCT 61.445 66.667 9.64 10.07 46.11 5.52
4537 5493 2.353607 GCTACGGACGATGAGGCG 60.354 66.667 0.00 0.00 37.29 5.52
4762 5718 1.605058 CGAAGTCACGGATGTCCCCT 61.605 60.000 0.00 0.00 0.00 4.79
5105 6082 4.435436 CCACCGCTGTCGCTGCTA 62.435 66.667 0.00 0.00 0.00 3.49
5107 6084 3.374402 ACCGCTGTCGCTGCTACT 61.374 61.111 5.88 0.00 0.00 2.57
5176 6153 5.265989 AGGAAGAAGATCTACGAGTTCCTT 58.734 41.667 14.03 0.00 39.41 3.36
5185 6162 4.087182 TCTACGAGTTCCTTCTCACCAAT 58.913 43.478 0.00 0.00 34.46 3.16
5410 6395 3.033659 TGGGCTTTGGTTCCTTTAACA 57.966 42.857 0.00 0.00 40.08 2.41
5425 6411 5.246429 TCCTTTAACACTCTTCTCCTCTTCC 59.754 44.000 0.00 0.00 0.00 3.46
5426 6412 5.247337 CCTTTAACACTCTTCTCCTCTTCCT 59.753 44.000 0.00 0.00 0.00 3.36
5555 6543 4.889832 AGCTTGAATCTAATTTGCGAGG 57.110 40.909 0.00 0.00 0.00 4.63
5573 6561 1.134788 AGGGATGTCGTTCGATTGGAC 60.135 52.381 0.00 4.58 0.00 4.02
5642 6630 2.094545 CCAGTGTGTCGTCTGATGATCA 60.095 50.000 0.00 0.00 34.02 2.92
5737 6725 6.884295 TGGTCTATTTGGAAGTGTAGAAATGG 59.116 38.462 0.00 0.00 0.00 3.16
5819 6807 5.831702 AGAAATTTGCATGGTGATCTCTC 57.168 39.130 0.00 0.00 0.00 3.20
5859 6849 3.125520 GGAGAGCTCCCCTGTCTAG 57.874 63.158 10.93 0.00 43.94 2.43
5860 6850 0.260523 GGAGAGCTCCCCTGTCTAGT 59.739 60.000 10.93 0.00 43.94 2.57
5861 6851 1.687563 GAGAGCTCCCCTGTCTAGTC 58.312 60.000 10.93 0.00 31.42 2.59
5862 6852 1.214424 GAGAGCTCCCCTGTCTAGTCT 59.786 57.143 10.93 0.00 31.42 3.24
5863 6853 1.214424 AGAGCTCCCCTGTCTAGTCTC 59.786 57.143 10.93 0.00 0.00 3.36
5864 6854 1.003646 AGCTCCCCTGTCTAGTCTCA 58.996 55.000 0.00 0.00 0.00 3.27
5865 6855 1.064017 AGCTCCCCTGTCTAGTCTCAG 60.064 57.143 0.00 0.00 0.00 3.35
5866 6856 1.064314 GCTCCCCTGTCTAGTCTCAGA 60.064 57.143 11.63 0.00 34.02 3.27
5867 6857 2.424234 GCTCCCCTGTCTAGTCTCAGAT 60.424 54.545 11.63 0.00 34.02 2.90
5868 6858 3.221771 CTCCCCTGTCTAGTCTCAGATG 58.778 54.545 11.63 5.16 34.02 2.90
5869 6859 2.091610 TCCCCTGTCTAGTCTCAGATGG 60.092 54.545 11.63 11.19 34.02 3.51
5870 6860 2.358721 CCCCTGTCTAGTCTCAGATGGT 60.359 54.545 11.63 0.00 34.02 3.55
5871 6861 2.692557 CCCTGTCTAGTCTCAGATGGTG 59.307 54.545 11.63 0.00 34.02 4.17
5872 6862 3.360867 CCTGTCTAGTCTCAGATGGTGT 58.639 50.000 11.63 0.00 34.02 4.16
5873 6863 3.380004 CCTGTCTAGTCTCAGATGGTGTC 59.620 52.174 11.63 0.00 34.02 3.67
5874 6864 3.010420 TGTCTAGTCTCAGATGGTGTCG 58.990 50.000 0.00 0.00 0.00 4.35
5875 6865 3.011119 GTCTAGTCTCAGATGGTGTCGT 58.989 50.000 0.00 0.00 0.00 4.34
5876 6866 3.010420 TCTAGTCTCAGATGGTGTCGTG 58.990 50.000 0.00 0.00 0.00 4.35
5877 6867 1.911057 AGTCTCAGATGGTGTCGTGA 58.089 50.000 0.00 0.00 0.00 4.35
5878 6868 1.815613 AGTCTCAGATGGTGTCGTGAG 59.184 52.381 0.00 0.00 35.35 3.51
5879 6869 1.135257 GTCTCAGATGGTGTCGTGAGG 60.135 57.143 0.00 0.00 35.05 3.86
5880 6870 1.177401 CTCAGATGGTGTCGTGAGGA 58.823 55.000 0.00 0.00 32.81 3.71
5881 6871 1.753649 CTCAGATGGTGTCGTGAGGAT 59.246 52.381 0.00 0.00 32.81 3.24
5882 6872 1.478105 TCAGATGGTGTCGTGAGGATG 59.522 52.381 0.00 0.00 0.00 3.51
5883 6873 1.478105 CAGATGGTGTCGTGAGGATGA 59.522 52.381 0.00 0.00 0.00 2.92
5884 6874 2.102084 CAGATGGTGTCGTGAGGATGAT 59.898 50.000 0.00 0.00 0.00 2.45
5885 6875 3.319122 CAGATGGTGTCGTGAGGATGATA 59.681 47.826 0.00 0.00 0.00 2.15
5886 6876 4.021632 CAGATGGTGTCGTGAGGATGATAT 60.022 45.833 0.00 0.00 0.00 1.63
5887 6877 3.733443 TGGTGTCGTGAGGATGATATG 57.267 47.619 0.00 0.00 0.00 1.78
5888 6878 3.031013 TGGTGTCGTGAGGATGATATGT 58.969 45.455 0.00 0.00 0.00 2.29
5889 6879 3.450817 TGGTGTCGTGAGGATGATATGTT 59.549 43.478 0.00 0.00 0.00 2.71
5890 6880 4.081142 TGGTGTCGTGAGGATGATATGTTT 60.081 41.667 0.00 0.00 0.00 2.83
5891 6881 4.271049 GGTGTCGTGAGGATGATATGTTTG 59.729 45.833 0.00 0.00 0.00 2.93
5892 6882 5.109210 GTGTCGTGAGGATGATATGTTTGA 58.891 41.667 0.00 0.00 0.00 2.69
5893 6883 5.580691 GTGTCGTGAGGATGATATGTTTGAA 59.419 40.000 0.00 0.00 0.00 2.69
5894 6884 5.812127 TGTCGTGAGGATGATATGTTTGAAG 59.188 40.000 0.00 0.00 0.00 3.02
5895 6885 6.042777 GTCGTGAGGATGATATGTTTGAAGA 58.957 40.000 0.00 0.00 0.00 2.87
5896 6886 6.535150 GTCGTGAGGATGATATGTTTGAAGAA 59.465 38.462 0.00 0.00 0.00 2.52
5897 6887 7.064609 GTCGTGAGGATGATATGTTTGAAGAAA 59.935 37.037 0.00 0.00 0.00 2.52
5898 6888 7.606073 TCGTGAGGATGATATGTTTGAAGAAAA 59.394 33.333 0.00 0.00 0.00 2.29
5899 6889 8.400947 CGTGAGGATGATATGTTTGAAGAAAAT 58.599 33.333 0.00 0.00 0.00 1.82
5911 6901 8.736751 TGTTTGAAGAAAATTATAAGTTCGCC 57.263 30.769 0.00 0.72 0.00 5.54
5912 6902 8.353684 TGTTTGAAGAAAATTATAAGTTCGCCA 58.646 29.630 0.00 2.90 0.00 5.69
5913 6903 9.187455 GTTTGAAGAAAATTATAAGTTCGCCAA 57.813 29.630 0.00 7.72 0.00 4.52
5914 6904 8.964420 TTGAAGAAAATTATAAGTTCGCCAAG 57.036 30.769 0.00 0.00 0.00 3.61
5915 6905 7.535139 TGAAGAAAATTATAAGTTCGCCAAGG 58.465 34.615 0.00 0.00 0.00 3.61
5916 6906 5.891451 AGAAAATTATAAGTTCGCCAAGGC 58.109 37.500 0.00 0.00 37.85 4.35
5917 6907 5.652452 AGAAAATTATAAGTTCGCCAAGGCT 59.348 36.000 9.73 0.00 39.32 4.58
5918 6908 5.914898 AAATTATAAGTTCGCCAAGGCTT 57.085 34.783 9.73 0.00 39.32 4.35
5919 6909 5.500645 AATTATAAGTTCGCCAAGGCTTC 57.499 39.130 9.73 0.00 39.32 3.86
5920 6910 2.789409 ATAAGTTCGCCAAGGCTTCT 57.211 45.000 9.73 1.99 39.32 2.85
5921 6911 1.808411 TAAGTTCGCCAAGGCTTCTG 58.192 50.000 9.73 0.00 39.32 3.02
5922 6912 0.179018 AAGTTCGCCAAGGCTTCTGT 60.179 50.000 9.73 0.00 39.32 3.41
5923 6913 0.685097 AGTTCGCCAAGGCTTCTGTA 59.315 50.000 9.73 0.00 39.32 2.74
5924 6914 1.079503 GTTCGCCAAGGCTTCTGTAG 58.920 55.000 9.73 0.00 39.32 2.74
5925 6915 0.685097 TTCGCCAAGGCTTCTGTAGT 59.315 50.000 9.73 0.00 39.32 2.73
5926 6916 0.685097 TCGCCAAGGCTTCTGTAGTT 59.315 50.000 9.73 0.00 39.32 2.24
5927 6917 1.079503 CGCCAAGGCTTCTGTAGTTC 58.920 55.000 9.73 0.00 39.32 3.01
5928 6918 1.608025 CGCCAAGGCTTCTGTAGTTCA 60.608 52.381 9.73 0.00 39.32 3.18
5929 6919 2.504367 GCCAAGGCTTCTGTAGTTCAA 58.496 47.619 3.29 0.00 38.26 2.69
5930 6920 2.884639 GCCAAGGCTTCTGTAGTTCAAA 59.115 45.455 3.29 0.00 38.26 2.69
5931 6921 3.317993 GCCAAGGCTTCTGTAGTTCAAAA 59.682 43.478 3.29 0.00 38.26 2.44
5932 6922 4.793028 GCCAAGGCTTCTGTAGTTCAAAAC 60.793 45.833 3.29 0.00 38.26 2.43
5933 6923 4.338118 CCAAGGCTTCTGTAGTTCAAAACA 59.662 41.667 0.00 0.00 0.00 2.83
5934 6924 5.163561 CCAAGGCTTCTGTAGTTCAAAACAA 60.164 40.000 0.00 0.00 0.00 2.83
5935 6925 5.757850 AGGCTTCTGTAGTTCAAAACAAG 57.242 39.130 0.00 0.00 0.00 3.16
5936 6926 5.437060 AGGCTTCTGTAGTTCAAAACAAGA 58.563 37.500 0.00 0.00 0.00 3.02
5937 6927 5.885912 AGGCTTCTGTAGTTCAAAACAAGAA 59.114 36.000 0.00 0.00 0.00 2.52
5938 6928 6.377146 AGGCTTCTGTAGTTCAAAACAAGAAA 59.623 34.615 0.00 0.00 31.62 2.52
5939 6929 7.033185 GGCTTCTGTAGTTCAAAACAAGAAAA 58.967 34.615 0.00 0.00 31.62 2.29
5940 6930 7.009265 GGCTTCTGTAGTTCAAAACAAGAAAAC 59.991 37.037 0.00 0.00 31.62 2.43
5941 6931 7.009265 GCTTCTGTAGTTCAAAACAAGAAAACC 59.991 37.037 0.00 0.00 31.62 3.27
5942 6932 7.696992 TCTGTAGTTCAAAACAAGAAAACCT 57.303 32.000 0.00 0.00 0.00 3.50
5943 6933 8.117813 TCTGTAGTTCAAAACAAGAAAACCTT 57.882 30.769 0.00 0.00 34.91 3.50
5954 6944 5.535753 CAAGAAAACCTTGGGATTGACTT 57.464 39.130 0.00 0.00 46.54 3.01
5955 6945 5.532557 CAAGAAAACCTTGGGATTGACTTC 58.467 41.667 0.00 0.00 46.54 3.01
5956 6946 4.803452 AGAAAACCTTGGGATTGACTTCA 58.197 39.130 0.00 0.00 0.00 3.02
5957 6947 5.208121 AGAAAACCTTGGGATTGACTTCAA 58.792 37.500 0.00 0.00 40.51 2.69
5958 6948 4.937201 AAACCTTGGGATTGACTTCAAC 57.063 40.909 0.00 0.00 38.86 3.18
5959 6949 2.876581 ACCTTGGGATTGACTTCAACC 58.123 47.619 0.00 0.00 38.86 3.77
5960 6950 2.171003 CCTTGGGATTGACTTCAACCC 58.829 52.381 16.65 16.65 42.42 4.11
5961 6951 2.490718 CCTTGGGATTGACTTCAACCCA 60.491 50.000 19.93 19.93 41.49 4.51
5962 6952 2.584835 TGGGATTGACTTCAACCCAG 57.415 50.000 19.93 0.00 41.49 4.45
5963 6953 1.075374 TGGGATTGACTTCAACCCAGG 59.925 52.381 19.93 0.00 41.49 4.45
5964 6954 1.075536 GGGATTGACTTCAACCCAGGT 59.924 52.381 17.79 0.00 41.49 4.00
5965 6955 2.437413 GGATTGACTTCAACCCAGGTC 58.563 52.381 0.00 0.00 39.42 3.85
5966 6956 2.437413 GATTGACTTCAACCCAGGTCC 58.563 52.381 0.00 0.00 38.86 4.46
5967 6957 1.217916 TTGACTTCAACCCAGGTCCA 58.782 50.000 0.00 0.00 0.00 4.02
5968 6958 0.472471 TGACTTCAACCCAGGTCCAC 59.528 55.000 0.00 0.00 0.00 4.02
5969 6959 0.602905 GACTTCAACCCAGGTCCACG 60.603 60.000 0.00 0.00 0.00 4.94
5970 6960 1.342672 ACTTCAACCCAGGTCCACGT 61.343 55.000 0.00 0.00 0.00 4.49
5971 6961 0.884704 CTTCAACCCAGGTCCACGTG 60.885 60.000 9.08 9.08 0.00 4.49
5985 6975 2.126071 CGTGGACCAACGCTCGAT 60.126 61.111 0.00 0.00 36.65 3.59
5986 6976 2.444624 CGTGGACCAACGCTCGATG 61.445 63.158 0.00 0.00 36.65 3.84
5987 6977 2.100631 GTGGACCAACGCTCGATGG 61.101 63.158 15.51 15.51 42.76 3.51
5988 6978 3.195698 GGACCAACGCTCGATGGC 61.196 66.667 16.74 10.33 41.09 4.40
5989 6979 2.434185 GACCAACGCTCGATGGCA 60.434 61.111 16.74 0.00 41.09 4.92
5990 6980 2.434884 ACCAACGCTCGATGGCAG 60.435 61.111 16.74 0.00 41.09 4.85
5991 6981 3.869272 CCAACGCTCGATGGCAGC 61.869 66.667 5.67 0.00 31.49 5.25
5992 6982 3.869272 CAACGCTCGATGGCAGCC 61.869 66.667 3.66 3.66 32.83 4.85
5996 6986 4.819761 GCTCGATGGCAGCCGTGA 62.820 66.667 12.21 8.18 0.00 4.35
5997 6987 2.125552 CTCGATGGCAGCCGTGAA 60.126 61.111 12.21 0.00 0.00 3.18
5998 6988 2.125552 TCGATGGCAGCCGTGAAG 60.126 61.111 12.21 2.26 0.00 3.02
5999 6989 3.197790 CGATGGCAGCCGTGAAGG 61.198 66.667 12.21 0.00 44.97 3.46
6008 6998 2.809601 CCGTGAAGGCGAACCGAG 60.810 66.667 0.00 0.00 42.76 4.63
6009 6999 2.049433 CGTGAAGGCGAACCGAGT 60.049 61.111 0.00 0.00 42.76 4.18
6010 7000 2.087009 CGTGAAGGCGAACCGAGTC 61.087 63.158 0.00 0.00 42.76 3.36
6011 7001 1.289380 GTGAAGGCGAACCGAGTCT 59.711 57.895 0.00 0.00 42.76 3.24
6012 7002 1.009389 GTGAAGGCGAACCGAGTCTG 61.009 60.000 0.00 0.00 42.76 3.51
6013 7003 1.176619 TGAAGGCGAACCGAGTCTGA 61.177 55.000 0.00 0.00 42.76 3.27
6014 7004 0.173708 GAAGGCGAACCGAGTCTGAT 59.826 55.000 0.00 0.00 42.76 2.90
6015 7005 0.608640 AAGGCGAACCGAGTCTGATT 59.391 50.000 0.00 0.00 42.76 2.57
6016 7006 0.108615 AGGCGAACCGAGTCTGATTG 60.109 55.000 0.00 0.00 42.76 2.67
6017 7007 1.084370 GGCGAACCGAGTCTGATTGG 61.084 60.000 0.00 0.00 0.00 3.16
6018 7008 0.389948 GCGAACCGAGTCTGATTGGT 60.390 55.000 0.00 0.00 38.72 3.67
6019 7009 1.630148 CGAACCGAGTCTGATTGGTC 58.370 55.000 0.00 0.00 35.79 4.02
6020 7010 1.202582 CGAACCGAGTCTGATTGGTCT 59.797 52.381 0.00 0.00 35.79 3.85
6021 7011 2.732597 CGAACCGAGTCTGATTGGTCTC 60.733 54.545 0.00 0.00 35.79 3.36
6022 7012 2.223803 ACCGAGTCTGATTGGTCTCT 57.776 50.000 0.00 0.00 30.52 3.10
6023 7013 2.530701 ACCGAGTCTGATTGGTCTCTT 58.469 47.619 0.00 0.00 30.52 2.85
6024 7014 2.494073 ACCGAGTCTGATTGGTCTCTTC 59.506 50.000 0.00 0.00 30.52 2.87
6025 7015 2.493675 CCGAGTCTGATTGGTCTCTTCA 59.506 50.000 0.00 0.00 0.00 3.02
6026 7016 3.056536 CCGAGTCTGATTGGTCTCTTCAA 60.057 47.826 0.00 0.00 0.00 2.69
6027 7017 3.923461 CGAGTCTGATTGGTCTCTTCAAC 59.077 47.826 0.00 0.00 0.00 3.18
6028 7018 4.559502 CGAGTCTGATTGGTCTCTTCAACA 60.560 45.833 0.00 0.00 0.00 3.33
6029 7019 5.296151 AGTCTGATTGGTCTCTTCAACAA 57.704 39.130 0.00 0.00 0.00 2.83
6030 7020 5.059833 AGTCTGATTGGTCTCTTCAACAAC 58.940 41.667 0.00 0.00 0.00 3.32
6031 7021 5.059833 GTCTGATTGGTCTCTTCAACAACT 58.940 41.667 0.00 0.00 0.00 3.16
6032 7022 5.529060 GTCTGATTGGTCTCTTCAACAACTT 59.471 40.000 0.00 0.00 0.00 2.66
6033 7023 5.760253 TCTGATTGGTCTCTTCAACAACTTC 59.240 40.000 0.00 0.00 0.00 3.01
6034 7024 5.436175 TGATTGGTCTCTTCAACAACTTCA 58.564 37.500 0.00 0.00 0.00 3.02
6035 7025 5.885352 TGATTGGTCTCTTCAACAACTTCAA 59.115 36.000 0.00 0.00 0.00 2.69
6036 7026 6.547141 TGATTGGTCTCTTCAACAACTTCAAT 59.453 34.615 0.00 0.00 0.00 2.57
6037 7027 5.756195 TGGTCTCTTCAACAACTTCAATG 57.244 39.130 0.00 0.00 0.00 2.82
6038 7028 4.580167 TGGTCTCTTCAACAACTTCAATGG 59.420 41.667 0.00 0.00 0.00 3.16
6039 7029 4.022849 GGTCTCTTCAACAACTTCAATGGG 60.023 45.833 0.00 0.00 0.00 4.00
6040 7030 4.580580 GTCTCTTCAACAACTTCAATGGGT 59.419 41.667 0.00 0.00 0.00 4.51
6041 7031 5.067805 GTCTCTTCAACAACTTCAATGGGTT 59.932 40.000 0.00 0.00 0.00 4.11
6042 7032 5.656416 TCTCTTCAACAACTTCAATGGGTTT 59.344 36.000 0.00 0.00 0.00 3.27
6043 7033 5.901552 TCTTCAACAACTTCAATGGGTTTC 58.098 37.500 0.00 0.00 0.00 2.78
6044 7034 5.656416 TCTTCAACAACTTCAATGGGTTTCT 59.344 36.000 0.00 0.00 0.00 2.52
6045 7035 5.514274 TCAACAACTTCAATGGGTTTCTC 57.486 39.130 0.00 0.00 0.00 2.87
6046 7036 4.952957 TCAACAACTTCAATGGGTTTCTCA 59.047 37.500 0.00 0.00 0.00 3.27
6047 7037 4.918810 ACAACTTCAATGGGTTTCTCAC 57.081 40.909 0.00 0.00 0.00 3.51
6048 7038 4.277476 ACAACTTCAATGGGTTTCTCACA 58.723 39.130 0.00 0.00 0.00 3.58
6049 7039 4.097892 ACAACTTCAATGGGTTTCTCACAC 59.902 41.667 0.00 0.00 29.52 3.82
6050 7040 3.897239 ACTTCAATGGGTTTCTCACACA 58.103 40.909 0.00 0.00 45.42 3.72
6051 7041 3.632145 ACTTCAATGGGTTTCTCACACAC 59.368 43.478 0.00 0.00 43.58 3.82
6052 7042 3.576078 TCAATGGGTTTCTCACACACT 57.424 42.857 0.00 0.00 43.58 3.55
6053 7043 3.897239 TCAATGGGTTTCTCACACACTT 58.103 40.909 0.00 0.00 43.58 3.16
6054 7044 5.042463 TCAATGGGTTTCTCACACACTTA 57.958 39.130 0.00 0.00 43.58 2.24
6055 7045 5.063204 TCAATGGGTTTCTCACACACTTAG 58.937 41.667 0.00 0.00 43.58 2.18
6056 7046 2.846193 TGGGTTTCTCACACACTTAGC 58.154 47.619 0.00 0.00 31.91 3.09
6057 7047 2.438021 TGGGTTTCTCACACACTTAGCT 59.562 45.455 0.00 0.00 31.91 3.32
6058 7048 2.808543 GGGTTTCTCACACACTTAGCTG 59.191 50.000 0.00 0.00 0.00 4.24
6059 7049 3.494398 GGGTTTCTCACACACTTAGCTGA 60.494 47.826 0.00 0.00 0.00 4.26
6060 7050 3.743396 GGTTTCTCACACACTTAGCTGAG 59.257 47.826 3.53 3.53 32.86 3.35
6061 7051 2.732412 TCTCACACACTTAGCTGAGC 57.268 50.000 5.23 0.00 31.83 4.26
6062 7052 1.963515 TCTCACACACTTAGCTGAGCA 59.036 47.619 7.39 0.00 31.83 4.26
6063 7053 2.365293 TCTCACACACTTAGCTGAGCAA 59.635 45.455 7.39 0.00 31.83 3.91
6064 7054 3.133691 CTCACACACTTAGCTGAGCAAA 58.866 45.455 7.39 0.00 0.00 3.68
6065 7055 3.133691 TCACACACTTAGCTGAGCAAAG 58.866 45.455 7.39 0.00 0.00 2.77
6066 7056 3.133691 CACACACTTAGCTGAGCAAAGA 58.866 45.455 7.39 0.00 0.00 2.52
6067 7057 3.186001 CACACACTTAGCTGAGCAAAGAG 59.814 47.826 7.39 0.91 0.00 2.85
6068 7058 2.159234 CACACTTAGCTGAGCAAAGAGC 59.841 50.000 7.39 0.00 46.19 4.09
6081 7071 3.791245 GCAAAGAGCTAGTGTAGATGCT 58.209 45.455 0.00 0.00 41.15 3.79
6082 7072 3.555139 GCAAAGAGCTAGTGTAGATGCTG 59.445 47.826 0.00 0.00 41.15 4.41
6083 7073 3.451141 AAGAGCTAGTGTAGATGCTGC 57.549 47.619 0.00 0.00 35.76 5.25
6084 7074 2.665165 AGAGCTAGTGTAGATGCTGCT 58.335 47.619 0.00 0.00 35.76 4.24
6085 7075 3.826524 AGAGCTAGTGTAGATGCTGCTA 58.173 45.455 0.00 0.00 35.76 3.49
6086 7076 4.211125 AGAGCTAGTGTAGATGCTGCTAA 58.789 43.478 0.00 0.00 35.76 3.09
6087 7077 4.646945 AGAGCTAGTGTAGATGCTGCTAAA 59.353 41.667 0.00 0.00 35.76 1.85
6088 7078 4.942852 AGCTAGTGTAGATGCTGCTAAAG 58.057 43.478 0.00 0.00 34.19 1.85
6089 7079 4.646945 AGCTAGTGTAGATGCTGCTAAAGA 59.353 41.667 0.00 0.00 34.19 2.52
6090 7080 5.304101 AGCTAGTGTAGATGCTGCTAAAGAT 59.696 40.000 0.00 0.00 34.19 2.40
6091 7081 5.404968 GCTAGTGTAGATGCTGCTAAAGATG 59.595 44.000 0.00 0.00 0.00 2.90
6092 7082 5.604758 AGTGTAGATGCTGCTAAAGATGA 57.395 39.130 0.00 0.00 0.00 2.92
6093 7083 5.599732 AGTGTAGATGCTGCTAAAGATGAG 58.400 41.667 0.00 0.00 0.00 2.90
6094 7084 5.128499 AGTGTAGATGCTGCTAAAGATGAGT 59.872 40.000 0.00 0.00 0.00 3.41
6095 7085 5.461737 GTGTAGATGCTGCTAAAGATGAGTC 59.538 44.000 0.00 0.00 0.00 3.36
6096 7086 3.715495 AGATGCTGCTAAAGATGAGTCG 58.285 45.455 0.00 0.00 0.00 4.18
6097 7087 1.645034 TGCTGCTAAAGATGAGTCGC 58.355 50.000 0.00 0.00 0.00 5.19
6098 7088 1.066929 TGCTGCTAAAGATGAGTCGCA 60.067 47.619 0.00 0.00 0.00 5.10
6099 7089 1.592081 GCTGCTAAAGATGAGTCGCAG 59.408 52.381 8.93 8.93 45.50 5.18
6100 7090 2.886081 CTGCTAAAGATGAGTCGCAGT 58.114 47.619 5.94 0.00 39.81 4.40
6101 7091 2.857152 CTGCTAAAGATGAGTCGCAGTC 59.143 50.000 5.94 0.00 39.81 3.51
6102 7092 2.493675 TGCTAAAGATGAGTCGCAGTCT 59.506 45.455 0.00 0.00 0.00 3.24
6103 7093 2.857152 GCTAAAGATGAGTCGCAGTCTG 59.143 50.000 0.00 0.00 0.00 3.51
6104 7094 3.428180 GCTAAAGATGAGTCGCAGTCTGA 60.428 47.826 3.32 0.00 0.00 3.27
6105 7095 3.667497 AAAGATGAGTCGCAGTCTGAA 57.333 42.857 3.32 0.00 0.00 3.02
6106 7096 2.937469 AGATGAGTCGCAGTCTGAAG 57.063 50.000 3.32 0.00 0.00 3.02
6107 7097 2.441410 AGATGAGTCGCAGTCTGAAGA 58.559 47.619 3.32 0.00 0.00 2.87
6108 7098 2.163412 AGATGAGTCGCAGTCTGAAGAC 59.837 50.000 16.50 16.50 45.08 3.01
6109 7099 0.598562 TGAGTCGCAGTCTGAAGACC 59.401 55.000 19.09 13.54 45.85 3.85
6110 7100 0.109039 GAGTCGCAGTCTGAAGACCC 60.109 60.000 19.09 9.06 45.85 4.46
6111 7101 0.540830 AGTCGCAGTCTGAAGACCCT 60.541 55.000 19.09 5.50 45.85 4.34
6112 7102 0.389166 GTCGCAGTCTGAAGACCCTG 60.389 60.000 3.32 1.58 45.85 4.45
6113 7103 0.539669 TCGCAGTCTGAAGACCCTGA 60.540 55.000 3.32 0.20 45.85 3.86
6114 7104 0.318441 CGCAGTCTGAAGACCCTGAA 59.682 55.000 3.32 0.00 45.85 3.02
6115 7105 1.802069 GCAGTCTGAAGACCCTGAAC 58.198 55.000 3.32 0.00 45.85 3.18
6116 7106 1.609320 GCAGTCTGAAGACCCTGAACC 60.609 57.143 3.32 0.00 45.85 3.62
6117 7107 1.694150 CAGTCTGAAGACCCTGAACCA 59.306 52.381 6.84 0.00 45.85 3.67
6118 7108 1.694696 AGTCTGAAGACCCTGAACCAC 59.305 52.381 6.84 0.00 45.85 4.16
6119 7109 1.694696 GTCTGAAGACCCTGAACCACT 59.305 52.381 0.00 0.00 39.07 4.00
6120 7110 1.694150 TCTGAAGACCCTGAACCACTG 59.306 52.381 0.00 0.00 0.00 3.66
6121 7111 1.694150 CTGAAGACCCTGAACCACTGA 59.306 52.381 0.00 0.00 0.00 3.41
6122 7112 2.104792 CTGAAGACCCTGAACCACTGAA 59.895 50.000 0.00 0.00 0.00 3.02
6123 7113 2.104792 TGAAGACCCTGAACCACTGAAG 59.895 50.000 0.00 0.00 0.00 3.02
6124 7114 0.398318 AGACCCTGAACCACTGAAGC 59.602 55.000 0.00 0.00 0.00 3.86
6125 7115 0.606673 GACCCTGAACCACTGAAGCC 60.607 60.000 0.00 0.00 0.00 4.35
6126 7116 1.352622 ACCCTGAACCACTGAAGCCA 61.353 55.000 0.00 0.00 0.00 4.75
6127 7117 0.607489 CCCTGAACCACTGAAGCCAG 60.607 60.000 0.00 0.00 45.76 4.85
6138 7128 3.117491 CTGAAGCCAGTGAAGAAGTCA 57.883 47.619 0.00 0.00 35.70 3.41
6139 7129 3.470709 CTGAAGCCAGTGAAGAAGTCAA 58.529 45.455 0.00 0.00 38.23 3.18
6140 7130 3.879295 CTGAAGCCAGTGAAGAAGTCAAA 59.121 43.478 0.00 0.00 38.23 2.69
6141 7131 3.879295 TGAAGCCAGTGAAGAAGTCAAAG 59.121 43.478 0.00 0.00 38.23 2.77
6142 7132 2.856222 AGCCAGTGAAGAAGTCAAAGG 58.144 47.619 0.00 0.00 38.23 3.11
6143 7133 1.268079 GCCAGTGAAGAAGTCAAAGGC 59.732 52.381 0.00 5.01 45.71 4.35
6144 7134 2.856222 CCAGTGAAGAAGTCAAAGGCT 58.144 47.619 0.00 0.00 38.23 4.58
6145 7135 3.217626 CCAGTGAAGAAGTCAAAGGCTT 58.782 45.455 0.00 0.00 38.23 4.35
6146 7136 3.251972 CCAGTGAAGAAGTCAAAGGCTTC 59.748 47.826 0.00 3.28 41.78 3.86
6147 7137 3.879295 CAGTGAAGAAGTCAAAGGCTTCA 59.121 43.478 13.16 0.00 43.36 3.02
6148 7138 4.336433 CAGTGAAGAAGTCAAAGGCTTCAA 59.664 41.667 13.16 0.00 45.61 2.69
6149 7139 4.578105 AGTGAAGAAGTCAAAGGCTTCAAG 59.422 41.667 13.16 0.00 45.61 3.02
6150 7140 3.885297 TGAAGAAGTCAAAGGCTTCAAGG 59.115 43.478 13.16 0.00 42.47 3.61
6151 7141 3.584733 AGAAGTCAAAGGCTTCAAGGT 57.415 42.857 13.16 0.00 43.36 3.50
6152 7142 3.481453 AGAAGTCAAAGGCTTCAAGGTC 58.519 45.455 13.16 0.00 43.36 3.85
6153 7143 3.137360 AGAAGTCAAAGGCTTCAAGGTCT 59.863 43.478 13.16 0.00 43.36 3.85
6154 7144 2.856222 AGTCAAAGGCTTCAAGGTCTG 58.144 47.619 0.00 0.00 0.00 3.51
6155 7145 1.268079 GTCAAAGGCTTCAAGGTCTGC 59.732 52.381 0.00 0.00 0.00 4.26
6156 7146 0.600057 CAAAGGCTTCAAGGTCTGCC 59.400 55.000 0.00 0.00 45.21 4.85
6158 7148 4.310288 GGCTTCAAGGTCTGCCTC 57.690 61.111 0.00 0.00 46.33 4.70
6159 7149 1.682257 GGCTTCAAGGTCTGCCTCT 59.318 57.895 0.00 0.00 46.33 3.69
6160 7150 0.676151 GGCTTCAAGGTCTGCCTCTG 60.676 60.000 0.00 0.00 46.33 3.35
6161 7151 1.304509 GCTTCAAGGTCTGCCTCTGC 61.305 60.000 0.00 0.00 46.33 4.26
6162 7152 0.324285 CTTCAAGGTCTGCCTCTGCT 59.676 55.000 0.00 0.00 46.33 4.24
6163 7153 0.322975 TTCAAGGTCTGCCTCTGCTC 59.677 55.000 0.00 0.00 46.33 4.26
6164 7154 1.078567 CAAGGTCTGCCTCTGCTCC 60.079 63.158 0.00 0.00 46.33 4.70
6165 7155 1.537397 AAGGTCTGCCTCTGCTCCA 60.537 57.895 0.00 0.00 46.33 3.86
6166 7156 1.130054 AAGGTCTGCCTCTGCTCCAA 61.130 55.000 0.00 0.00 46.33 3.53
6167 7157 1.130054 AGGTCTGCCTCTGCTCCAAA 61.130 55.000 0.00 0.00 42.67 3.28
6168 7158 0.250901 GGTCTGCCTCTGCTCCAAAA 60.251 55.000 0.00 0.00 38.71 2.44
6169 7159 1.163554 GTCTGCCTCTGCTCCAAAAG 58.836 55.000 0.00 0.00 38.71 2.27
6170 7160 0.767375 TCTGCCTCTGCTCCAAAAGT 59.233 50.000 0.00 0.00 38.71 2.66
6171 7161 1.143684 TCTGCCTCTGCTCCAAAAGTT 59.856 47.619 0.00 0.00 38.71 2.66
6172 7162 1.959282 CTGCCTCTGCTCCAAAAGTTT 59.041 47.619 0.00 0.00 38.71 2.66
6173 7163 1.956477 TGCCTCTGCTCCAAAAGTTTC 59.044 47.619 0.00 0.00 38.71 2.78
6174 7164 1.956477 GCCTCTGCTCCAAAAGTTTCA 59.044 47.619 0.00 0.00 33.53 2.69
6175 7165 2.362077 GCCTCTGCTCCAAAAGTTTCAA 59.638 45.455 0.00 0.00 33.53 2.69
6176 7166 3.551659 GCCTCTGCTCCAAAAGTTTCAAG 60.552 47.826 0.00 0.00 33.53 3.02
6177 7167 3.885297 CCTCTGCTCCAAAAGTTTCAAGA 59.115 43.478 0.00 0.00 0.00 3.02
6178 7168 4.023365 CCTCTGCTCCAAAAGTTTCAAGAG 60.023 45.833 0.00 0.00 0.00 2.85
6179 7169 4.526970 TCTGCTCCAAAAGTTTCAAGAGT 58.473 39.130 9.80 0.00 0.00 3.24
6180 7170 4.336433 TCTGCTCCAAAAGTTTCAAGAGTG 59.664 41.667 9.80 5.50 0.00 3.51
6181 7171 4.269183 TGCTCCAAAAGTTTCAAGAGTGA 58.731 39.130 9.80 0.00 0.00 3.41
6182 7172 4.704540 TGCTCCAAAAGTTTCAAGAGTGAA 59.295 37.500 9.80 0.00 42.12 3.18
6183 7173 5.163622 TGCTCCAAAAGTTTCAAGAGTGAAG 60.164 40.000 9.80 0.00 44.49 3.02
6184 7174 5.248870 TCCAAAAGTTTCAAGAGTGAAGC 57.751 39.130 0.00 0.00 44.49 3.86
6185 7175 4.097892 TCCAAAAGTTTCAAGAGTGAAGCC 59.902 41.667 0.41 0.00 43.84 4.35
6186 7176 4.142182 CCAAAAGTTTCAAGAGTGAAGCCA 60.142 41.667 0.41 0.00 43.84 4.75
6187 7177 5.452356 CCAAAAGTTTCAAGAGTGAAGCCAT 60.452 40.000 0.41 0.00 43.84 4.40
6188 7178 5.859205 AAAGTTTCAAGAGTGAAGCCATT 57.141 34.783 0.41 0.00 43.84 3.16
6189 7179 4.843220 AGTTTCAAGAGTGAAGCCATTG 57.157 40.909 0.41 0.00 43.84 2.82
6190 7180 4.464008 AGTTTCAAGAGTGAAGCCATTGA 58.536 39.130 0.41 0.00 43.84 2.57
6191 7181 4.889409 AGTTTCAAGAGTGAAGCCATTGAA 59.111 37.500 0.41 0.00 43.84 2.69
6192 7182 5.360714 AGTTTCAAGAGTGAAGCCATTGAAA 59.639 36.000 7.17 7.17 43.84 2.69
6193 7183 5.850557 TTCAAGAGTGAAGCCATTGAAAA 57.149 34.783 0.00 0.00 38.88 2.29
6194 7184 6.409524 TTCAAGAGTGAAGCCATTGAAAAT 57.590 33.333 0.00 0.00 38.88 1.82
6195 7185 6.409524 TCAAGAGTGAAGCCATTGAAAATT 57.590 33.333 0.00 0.00 0.00 1.82
6196 7186 6.218019 TCAAGAGTGAAGCCATTGAAAATTG 58.782 36.000 0.00 0.00 0.00 2.32
6197 7187 4.563061 AGAGTGAAGCCATTGAAAATTGC 58.437 39.130 0.00 0.00 0.00 3.56
6198 7188 4.039488 AGAGTGAAGCCATTGAAAATTGCA 59.961 37.500 0.00 0.00 0.00 4.08
6199 7189 4.060205 AGTGAAGCCATTGAAAATTGCAC 58.940 39.130 0.00 0.00 0.00 4.57
6200 7190 3.187022 GTGAAGCCATTGAAAATTGCACC 59.813 43.478 0.00 0.00 0.00 5.01
6201 7191 3.071312 TGAAGCCATTGAAAATTGCACCT 59.929 39.130 0.00 0.00 0.00 4.00
6202 7192 3.775261 AGCCATTGAAAATTGCACCTT 57.225 38.095 0.00 0.00 0.00 3.50
6203 7193 3.667360 AGCCATTGAAAATTGCACCTTC 58.333 40.909 0.00 0.00 0.00 3.46
6204 7194 3.325716 AGCCATTGAAAATTGCACCTTCT 59.674 39.130 0.00 0.00 0.00 2.85
6205 7195 3.434299 GCCATTGAAAATTGCACCTTCTG 59.566 43.478 0.00 0.00 0.00 3.02
6206 7196 4.800249 GCCATTGAAAATTGCACCTTCTGA 60.800 41.667 0.00 0.00 0.00 3.27
6207 7197 5.299148 CCATTGAAAATTGCACCTTCTGAA 58.701 37.500 0.00 0.00 0.00 3.02
6208 7198 5.935789 CCATTGAAAATTGCACCTTCTGAAT 59.064 36.000 0.00 0.00 0.00 2.57
6209 7199 6.091713 CCATTGAAAATTGCACCTTCTGAATC 59.908 38.462 0.00 0.00 0.00 2.52
6210 7200 5.138125 TGAAAATTGCACCTTCTGAATCC 57.862 39.130 0.00 0.00 0.00 3.01
6211 7201 4.588106 TGAAAATTGCACCTTCTGAATCCA 59.412 37.500 0.00 0.00 0.00 3.41
6212 7202 4.796038 AAATTGCACCTTCTGAATCCAG 57.204 40.909 0.00 0.00 41.74 3.86
6213 7203 2.957402 TTGCACCTTCTGAATCCAGT 57.043 45.000 0.00 0.00 41.16 4.00
6214 7204 2.189594 TGCACCTTCTGAATCCAGTG 57.810 50.000 0.00 0.00 41.16 3.66
6215 7205 1.421268 TGCACCTTCTGAATCCAGTGT 59.579 47.619 9.96 0.00 41.16 3.55
6216 7206 1.808945 GCACCTTCTGAATCCAGTGTG 59.191 52.381 9.96 0.00 41.16 3.82
6217 7207 1.808945 CACCTTCTGAATCCAGTGTGC 59.191 52.381 0.00 0.00 41.16 4.57
6218 7208 1.421268 ACCTTCTGAATCCAGTGTGCA 59.579 47.619 0.00 0.00 41.16 4.57
6219 7209 2.040813 ACCTTCTGAATCCAGTGTGCAT 59.959 45.455 0.00 0.00 41.16 3.96
6220 7210 3.087031 CCTTCTGAATCCAGTGTGCATT 58.913 45.455 0.00 0.00 41.16 3.56
6221 7211 3.128242 CCTTCTGAATCCAGTGTGCATTC 59.872 47.826 0.00 0.00 41.16 2.67
6222 7212 3.708403 TCTGAATCCAGTGTGCATTCT 57.292 42.857 0.00 0.00 41.16 2.40
6223 7213 3.340928 TCTGAATCCAGTGTGCATTCTG 58.659 45.455 12.24 12.24 41.16 3.02
6224 7214 3.008266 TCTGAATCCAGTGTGCATTCTGA 59.992 43.478 18.37 9.99 41.16 3.27
6225 7215 3.753815 TGAATCCAGTGTGCATTCTGAA 58.246 40.909 18.37 3.12 34.02 3.02
6226 7216 3.754850 TGAATCCAGTGTGCATTCTGAAG 59.245 43.478 18.37 6.78 34.02 3.02
6227 7217 3.708403 ATCCAGTGTGCATTCTGAAGA 57.292 42.857 18.37 10.77 34.02 2.87
6228 7218 2.771089 TCCAGTGTGCATTCTGAAGAC 58.229 47.619 18.37 0.00 34.02 3.01
6229 7219 1.808945 CCAGTGTGCATTCTGAAGACC 59.191 52.381 18.37 0.00 34.02 3.85
6230 7220 1.808945 CAGTGTGCATTCTGAAGACCC 59.191 52.381 13.47 0.00 34.02 4.46
6231 7221 0.798776 GTGTGCATTCTGAAGACCCG 59.201 55.000 0.00 0.00 0.00 5.28
6232 7222 0.396435 TGTGCATTCTGAAGACCCGT 59.604 50.000 0.00 0.00 0.00 5.28
6233 7223 1.079503 GTGCATTCTGAAGACCCGTC 58.920 55.000 0.00 0.00 0.00 4.79
6234 7224 0.976641 TGCATTCTGAAGACCCGTCT 59.023 50.000 0.00 0.00 42.75 4.18
6235 7225 1.066858 TGCATTCTGAAGACCCGTCTC 60.067 52.381 0.00 0.00 39.39 3.36
6236 7226 1.914634 CATTCTGAAGACCCGTCTCG 58.085 55.000 0.00 0.00 39.39 4.04
6237 7227 1.202582 CATTCTGAAGACCCGTCTCGT 59.797 52.381 0.00 0.00 39.39 4.18
6238 7228 2.189594 TTCTGAAGACCCGTCTCGTA 57.810 50.000 0.00 0.00 39.39 3.43
6239 7229 1.446907 TCTGAAGACCCGTCTCGTAC 58.553 55.000 0.00 0.00 39.39 3.67
6240 7230 1.002888 TCTGAAGACCCGTCTCGTACT 59.997 52.381 0.00 0.00 39.39 2.73
6241 7231 1.811359 CTGAAGACCCGTCTCGTACTT 59.189 52.381 0.00 0.00 39.39 2.24
6242 7232 1.808945 TGAAGACCCGTCTCGTACTTC 59.191 52.381 0.00 0.00 39.39 3.01
6243 7233 2.083002 GAAGACCCGTCTCGTACTTCT 58.917 52.381 0.00 0.00 39.39 2.85
6244 7234 1.451067 AGACCCGTCTCGTACTTCTG 58.549 55.000 0.00 0.00 34.17 3.02
6245 7235 1.163554 GACCCGTCTCGTACTTCTGT 58.836 55.000 0.00 0.00 0.00 3.41
6246 7236 2.027745 AGACCCGTCTCGTACTTCTGTA 60.028 50.000 0.00 0.00 34.17 2.74
6247 7237 2.744202 GACCCGTCTCGTACTTCTGTAA 59.256 50.000 0.00 0.00 0.00 2.41
6248 7238 3.149196 ACCCGTCTCGTACTTCTGTAAA 58.851 45.455 0.00 0.00 0.00 2.01
6249 7239 3.190118 ACCCGTCTCGTACTTCTGTAAAG 59.810 47.826 0.00 0.00 0.00 1.85
6250 7240 3.438087 CCCGTCTCGTACTTCTGTAAAGA 59.562 47.826 0.00 0.00 0.00 2.52
6251 7241 4.083110 CCCGTCTCGTACTTCTGTAAAGAA 60.083 45.833 0.00 0.00 29.91 2.52
6253 7243 5.106791 CCGTCTCGTACTTCTGTAAAGAAGA 60.107 44.000 26.39 9.60 45.93 2.87
6254 7244 6.369005 CGTCTCGTACTTCTGTAAAGAAGAA 58.631 40.000 26.39 9.73 45.93 2.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
451 465 2.910688 ATGTATGCAGGAACTACCGG 57.089 50.000 0.00 0.00 44.74 5.28
453 467 5.539048 ACGATTATGTATGCAGGAACTACC 58.461 41.667 0.00 0.00 36.02 3.18
455 469 9.203421 CATAAACGATTATGTATGCAGGAACTA 57.797 33.333 15.22 0.00 42.23 2.24
470 484 9.251792 AGCACGTAATAATCACATAAACGATTA 57.748 29.630 0.00 0.00 38.21 1.75
471 485 8.061857 CAGCACGTAATAATCACATAAACGATT 58.938 33.333 0.00 0.00 35.97 3.34
472 486 7.223971 ACAGCACGTAATAATCACATAAACGAT 59.776 33.333 0.00 0.00 33.40 3.73
474 488 6.701937 ACAGCACGTAATAATCACATAAACG 58.298 36.000 0.00 0.00 35.17 3.60
475 489 8.889849 AAACAGCACGTAATAATCACATAAAC 57.110 30.769 0.00 0.00 0.00 2.01
476 490 9.335891 CAAAACAGCACGTAATAATCACATAAA 57.664 29.630 0.00 0.00 0.00 1.40
477 491 7.483375 GCAAAACAGCACGTAATAATCACATAA 59.517 33.333 0.00 0.00 0.00 1.90
478 492 6.964370 GCAAAACAGCACGTAATAATCACATA 59.036 34.615 0.00 0.00 0.00 2.29
479 493 5.799936 GCAAAACAGCACGTAATAATCACAT 59.200 36.000 0.00 0.00 0.00 3.21
480 494 5.150683 GCAAAACAGCACGTAATAATCACA 58.849 37.500 0.00 0.00 0.00 3.58
532 546 1.312815 GAGGGGAGAAAATGATGCGG 58.687 55.000 0.00 0.00 0.00 5.69
591 605 1.747355 CTCCACAGAATCATTGGTGCC 59.253 52.381 0.87 0.00 0.00 5.01
605 619 0.766131 TAAAAAGGGACGGCTCCACA 59.234 50.000 0.00 0.00 38.52 4.17
633 647 5.066375 CCCTATCATCGCTGTCAAATTTTCA 59.934 40.000 0.00 0.00 0.00 2.69
636 650 3.885297 CCCCTATCATCGCTGTCAAATTT 59.115 43.478 0.00 0.00 0.00 1.82
637 651 3.117888 ACCCCTATCATCGCTGTCAAATT 60.118 43.478 0.00 0.00 0.00 1.82
707 721 2.424601 TCCACGGTAGTACCATCTTTCG 59.575 50.000 19.41 5.80 38.47 3.46
780 794 9.308000 ACTTTTCATGAATGTATTTACAGGGAA 57.692 29.630 9.40 0.00 39.92 3.97
799 816 5.212532 ACAATAATGGCTGCAACTTTTCA 57.787 34.783 0.50 0.00 0.00 2.69
818 835 6.605594 AGTGAAAGAAATGAACCTGGTTACAA 59.394 34.615 12.96 1.68 0.00 2.41
835 852 2.693074 GCCCCTGTTCAAAAGTGAAAGA 59.307 45.455 0.00 0.00 45.29 2.52
910 927 6.652481 ACAAGTGTATGAAGAATCAGAACCAG 59.348 38.462 0.00 0.00 39.39 4.00
1113 1130 2.264455 AGATCACTCCCTGAAAGTGCT 58.736 47.619 0.00 0.00 43.09 4.40
1185 1202 2.391678 TCCTCGGGAAGGGTTACATAC 58.608 52.381 0.00 0.00 46.23 2.39
1191 1208 2.067197 CTGTTCCTCGGGAAGGGTT 58.933 57.895 5.71 0.00 46.23 4.11
1399 1416 0.746563 GGTTTCGATCCATTGGCCGA 60.747 55.000 13.52 13.52 0.00 5.54
1431 1448 1.537202 GACAAGACGCCAGCATCTTTT 59.463 47.619 0.00 0.00 32.77 2.27
1504 1521 5.335661 CCGGTTTCTTATTTTCTGTCCCAAG 60.336 44.000 0.00 0.00 0.00 3.61
1986 2003 6.994421 TCAAATGCATCTATCAGTAGGGTA 57.006 37.500 0.00 0.00 0.00 3.69
1987 2004 5.894298 TCAAATGCATCTATCAGTAGGGT 57.106 39.130 0.00 0.00 0.00 4.34
1988 2005 6.236409 ACATCAAATGCATCTATCAGTAGGG 58.764 40.000 0.00 0.00 0.00 3.53
2156 2173 5.562890 GCGAAGTTACTTTGGAGCAAAATCT 60.563 40.000 13.58 0.00 32.75 2.40
2326 2349 2.160721 AGGAGGATGCTTCTTCGGTA 57.839 50.000 5.76 0.00 22.99 4.02
2582 2613 7.344612 TCAATACTCATAGACATTGGTGGTAGT 59.655 37.037 0.00 0.00 0.00 2.73
2624 2945 7.254421 CCTTTTACAACAAATTTTCTCACAGGC 60.254 37.037 0.00 0.00 0.00 4.85
2625 2946 7.763985 ACCTTTTACAACAAATTTTCTCACAGG 59.236 33.333 0.00 0.00 0.00 4.00
2709 3143 1.437573 CACCTGCGCCGATTCTCTA 59.562 57.895 4.18 0.00 0.00 2.43
2797 3231 1.717032 TCACAAGGCTAGTGTCTGGT 58.283 50.000 0.00 0.00 38.16 4.00
2836 3275 9.103861 TCATAGCAACGAATGACAACATAATAA 57.896 29.630 0.00 0.00 35.50 1.40
2931 3629 8.157476 ACACTATTTTCTGGAAACTATGTCTGT 58.843 33.333 0.00 0.00 0.00 3.41
2932 3630 8.446273 CACACTATTTTCTGGAAACTATGTCTG 58.554 37.037 0.00 0.00 0.00 3.51
2933 3631 8.157476 ACACACTATTTTCTGGAAACTATGTCT 58.843 33.333 0.00 0.00 0.00 3.41
2934 3632 8.230486 CACACACTATTTTCTGGAAACTATGTC 58.770 37.037 0.00 0.00 0.00 3.06
2958 3656 5.953183 TCCATCAAAGTATTCAACATGCAC 58.047 37.500 0.00 0.00 0.00 4.57
2967 3665 7.035840 AGCATGTGATTCCATCAAAGTATTC 57.964 36.000 0.00 0.00 41.69 1.75
2983 3683 3.429492 TCTTAATGGGCAAAGCATGTGA 58.571 40.909 0.00 0.00 0.00 3.58
3122 3823 8.766476 TGAATCCATCCCAAAATTTGCTAATTA 58.234 29.630 6.55 0.00 32.85 1.40
3196 3918 2.930826 AGTTGGGTTGAACTGTCGAT 57.069 45.000 0.00 0.00 34.79 3.59
3315 4037 8.650143 TGTCCTGTATCTAGCATGTTATGATA 57.350 34.615 0.00 0.36 0.00 2.15
3317 4039 6.976934 TGTCCTGTATCTAGCATGTTATGA 57.023 37.500 0.00 0.00 0.00 2.15
3423 4145 2.046892 CCCTTGTGAGGTGCGAGG 60.047 66.667 0.00 0.00 41.85 4.63
3536 4258 0.846427 TGGGGTCTCAAAGGGCAGAT 60.846 55.000 0.00 0.00 0.00 2.90
3618 4343 6.800072 AGTTAATTCTGGTTTGGGAAAACA 57.200 33.333 3.96 0.00 36.49 2.83
3624 4349 5.076873 TCTGGAAGTTAATTCTGGTTTGGG 58.923 41.667 0.00 0.00 38.07 4.12
3720 4445 0.101399 TGACAATTTTTGCACGCCGT 59.899 45.000 0.00 0.00 0.00 5.68
3847 4573 5.295292 ACACAGCATGAACATAGAGCAATAC 59.705 40.000 0.00 0.00 39.69 1.89
3901 4636 5.633182 GTCGTCAATATGCAAACCAAAACAT 59.367 36.000 0.00 0.00 0.00 2.71
3919 4654 4.035091 CACAGTTCTGAAAATTGGTCGTCA 59.965 41.667 6.83 0.00 0.00 4.35
3977 4712 5.760253 GCAAGTACAGTGCAATGATAGGTAT 59.240 40.000 22.73 0.00 41.80 2.73
4010 4770 6.431234 AGTTGATGATGGTAGAAGGAAACAAC 59.569 38.462 0.00 0.00 34.84 3.32
4145 4906 3.416277 CACAGTTGTGTCACAAAAGACG 58.584 45.455 19.77 9.19 40.15 4.18
4169 4930 1.346062 TTTCTGCAGAGTCAGGAGCT 58.654 50.000 17.43 0.00 34.91 4.09
4192 4978 1.864176 GTGCAGTAAAACCCCGACG 59.136 57.895 0.00 0.00 0.00 5.12
4199 5038 3.365565 CCATGGTAACCGTGCAGTAAAAC 60.366 47.826 2.57 0.00 39.07 2.43
4200 5039 2.814919 CCATGGTAACCGTGCAGTAAAA 59.185 45.455 2.57 0.00 39.07 1.52
4220 5059 2.033194 GTGCAAGTGTACGGCTCCC 61.033 63.158 0.00 0.00 0.00 4.30
4221 5060 1.291877 CTGTGCAAGTGTACGGCTCC 61.292 60.000 0.00 0.00 33.15 4.70
4236 5174 4.502171 TCACAATAAACATGGCACTGTG 57.498 40.909 2.76 2.76 35.21 3.66
4280 5218 7.094592 TGTCGCCACATTACTCAAATTATGAAA 60.095 33.333 0.00 0.00 37.67 2.69
4281 5219 6.372937 TGTCGCCACATTACTCAAATTATGAA 59.627 34.615 0.00 0.00 37.67 2.57
4304 5242 7.013655 ACAAGCAAGTCAAGTAAGAATCAATGT 59.986 33.333 0.00 0.00 0.00 2.71
4305 5243 7.365741 ACAAGCAAGTCAAGTAAGAATCAATG 58.634 34.615 0.00 0.00 0.00 2.82
4321 5259 2.418609 GCTCCCACAAAAACAAGCAAGT 60.419 45.455 0.00 0.00 0.00 3.16
4372 5310 2.922503 TGCGGGTTCTGCTCCTCA 60.923 61.111 0.30 0.00 0.00 3.86
4515 5471 0.309302 CTCATCGTCCGTAGCAGAGG 59.691 60.000 0.00 0.00 0.00 3.69
4522 5478 3.896133 GCCGCCTCATCGTCCGTA 61.896 66.667 0.00 0.00 0.00 4.02
4762 5718 4.082523 CTCGGCTTCCCCTTCGCA 62.083 66.667 0.00 0.00 0.00 5.10
4879 5838 4.024984 CCCCTGGACTCCTCCCCA 62.025 72.222 0.00 0.00 35.34 4.96
5093 6070 2.161486 CCGAAGTAGCAGCGACAGC 61.161 63.158 8.50 0.00 45.58 4.40
5095 6072 2.126071 GCCGAAGTAGCAGCGACA 60.126 61.111 8.50 0.00 0.00 4.35
5097 6074 2.938086 TTGGCCGAAGTAGCAGCGA 61.938 57.895 0.00 0.00 0.00 4.93
5098 6075 2.434185 TTGGCCGAAGTAGCAGCG 60.434 61.111 0.00 0.00 0.00 5.18
5176 6153 1.067565 GCTGAGTCGACATTGGTGAGA 60.068 52.381 19.50 0.00 0.00 3.27
5185 6162 4.724602 GCGGCAGCTGAGTCGACA 62.725 66.667 20.43 0.00 41.01 4.35
5410 6395 3.852578 AGAGAGAGGAAGAGGAGAAGAGT 59.147 47.826 0.00 0.00 0.00 3.24
5425 6411 6.604735 TTTTTCTTGAACGGAAAGAGAGAG 57.395 37.500 0.00 0.00 35.20 3.20
5555 6543 1.927174 CAGTCCAATCGAACGACATCC 59.073 52.381 11.14 0.00 0.00 3.51
5573 6561 4.688021 CCTCGGAAAATTAGAGAGGTCAG 58.312 47.826 9.65 0.00 42.48 3.51
5642 6630 6.819284 TGGAATGTTTTCAGCTCAAAGAAAT 58.181 32.000 0.00 0.00 34.10 2.17
5803 6791 1.550072 TGACGAGAGATCACCATGCAA 59.450 47.619 0.00 0.00 0.00 4.08
5853 6843 3.010420 CGACACCATCTGAGACTAGACA 58.990 50.000 0.00 0.00 0.00 3.41
5854 6844 3.011119 ACGACACCATCTGAGACTAGAC 58.989 50.000 0.00 0.00 0.00 2.59
5855 6845 3.010420 CACGACACCATCTGAGACTAGA 58.990 50.000 0.00 0.00 0.00 2.43
5856 6846 3.010420 TCACGACACCATCTGAGACTAG 58.990 50.000 0.00 0.00 0.00 2.57
5857 6847 3.010420 CTCACGACACCATCTGAGACTA 58.990 50.000 0.00 0.00 35.92 2.59
5858 6848 1.815613 CTCACGACACCATCTGAGACT 59.184 52.381 0.00 0.00 35.92 3.24
5859 6849 1.135257 CCTCACGACACCATCTGAGAC 60.135 57.143 0.00 0.00 35.92 3.36
5860 6850 1.177401 CCTCACGACACCATCTGAGA 58.823 55.000 0.00 0.00 35.92 3.27
5861 6851 1.177401 TCCTCACGACACCATCTGAG 58.823 55.000 0.00 0.00 34.71 3.35
5862 6852 1.478105 CATCCTCACGACACCATCTGA 59.522 52.381 0.00 0.00 0.00 3.27
5863 6853 1.478105 TCATCCTCACGACACCATCTG 59.522 52.381 0.00 0.00 0.00 2.90
5864 6854 1.852633 TCATCCTCACGACACCATCT 58.147 50.000 0.00 0.00 0.00 2.90
5865 6855 2.898729 ATCATCCTCACGACACCATC 57.101 50.000 0.00 0.00 0.00 3.51
5866 6856 3.643320 ACATATCATCCTCACGACACCAT 59.357 43.478 0.00 0.00 0.00 3.55
5867 6857 3.031013 ACATATCATCCTCACGACACCA 58.969 45.455 0.00 0.00 0.00 4.17
5868 6858 3.735237 ACATATCATCCTCACGACACC 57.265 47.619 0.00 0.00 0.00 4.16
5869 6859 5.109210 TCAAACATATCATCCTCACGACAC 58.891 41.667 0.00 0.00 0.00 3.67
5870 6860 5.337578 TCAAACATATCATCCTCACGACA 57.662 39.130 0.00 0.00 0.00 4.35
5871 6861 6.042777 TCTTCAAACATATCATCCTCACGAC 58.957 40.000 0.00 0.00 0.00 4.34
5872 6862 6.220726 TCTTCAAACATATCATCCTCACGA 57.779 37.500 0.00 0.00 0.00 4.35
5873 6863 6.908870 TTCTTCAAACATATCATCCTCACG 57.091 37.500 0.00 0.00 0.00 4.35
5885 6875 9.353999 GGCGAACTTATAATTTTCTTCAAACAT 57.646 29.630 0.00 0.00 0.00 2.71
5886 6876 8.353684 TGGCGAACTTATAATTTTCTTCAAACA 58.646 29.630 0.00 0.00 0.00 2.83
5887 6877 8.736751 TGGCGAACTTATAATTTTCTTCAAAC 57.263 30.769 0.00 0.00 0.00 2.93
5888 6878 9.405587 CTTGGCGAACTTATAATTTTCTTCAAA 57.594 29.630 0.00 0.00 0.00 2.69
5889 6879 8.026607 CCTTGGCGAACTTATAATTTTCTTCAA 58.973 33.333 0.00 7.74 0.00 2.69
5890 6880 7.535139 CCTTGGCGAACTTATAATTTTCTTCA 58.465 34.615 0.00 2.48 0.00 3.02
5891 6881 6.472486 GCCTTGGCGAACTTATAATTTTCTTC 59.528 38.462 0.00 0.00 0.00 2.87
5892 6882 6.152831 AGCCTTGGCGAACTTATAATTTTCTT 59.847 34.615 5.95 0.00 0.00 2.52
5893 6883 5.652452 AGCCTTGGCGAACTTATAATTTTCT 59.348 36.000 5.95 0.00 0.00 2.52
5894 6884 5.891451 AGCCTTGGCGAACTTATAATTTTC 58.109 37.500 5.95 0.00 0.00 2.29
5895 6885 5.914898 AGCCTTGGCGAACTTATAATTTT 57.085 34.783 5.95 0.00 0.00 1.82
5896 6886 5.652452 AGAAGCCTTGGCGAACTTATAATTT 59.348 36.000 5.95 0.00 0.00 1.82
5897 6887 5.066505 CAGAAGCCTTGGCGAACTTATAATT 59.933 40.000 5.95 0.00 0.00 1.40
5898 6888 4.576463 CAGAAGCCTTGGCGAACTTATAAT 59.424 41.667 5.95 0.00 0.00 1.28
5899 6889 3.938963 CAGAAGCCTTGGCGAACTTATAA 59.061 43.478 5.95 0.00 0.00 0.98
5900 6890 3.055385 ACAGAAGCCTTGGCGAACTTATA 60.055 43.478 5.95 0.00 0.00 0.98
5901 6891 2.290323 ACAGAAGCCTTGGCGAACTTAT 60.290 45.455 5.95 0.00 0.00 1.73
5902 6892 1.071699 ACAGAAGCCTTGGCGAACTTA 59.928 47.619 5.95 0.00 0.00 2.24
5903 6893 0.179018 ACAGAAGCCTTGGCGAACTT 60.179 50.000 5.95 0.00 0.00 2.66
5904 6894 0.685097 TACAGAAGCCTTGGCGAACT 59.315 50.000 5.95 4.50 0.00 3.01
5905 6895 1.079503 CTACAGAAGCCTTGGCGAAC 58.920 55.000 5.95 2.30 0.00 3.95
5906 6896 0.685097 ACTACAGAAGCCTTGGCGAA 59.315 50.000 5.95 0.00 0.00 4.70
5907 6897 0.685097 AACTACAGAAGCCTTGGCGA 59.315 50.000 5.95 0.00 0.00 5.54
5908 6898 1.079503 GAACTACAGAAGCCTTGGCG 58.920 55.000 5.95 0.00 0.00 5.69
5909 6899 2.185004 TGAACTACAGAAGCCTTGGC 57.815 50.000 2.97 2.97 0.00 4.52
5910 6900 4.338118 TGTTTTGAACTACAGAAGCCTTGG 59.662 41.667 0.00 0.00 0.00 3.61
5911 6901 5.499139 TGTTTTGAACTACAGAAGCCTTG 57.501 39.130 0.00 0.00 0.00 3.61
5912 6902 5.885912 TCTTGTTTTGAACTACAGAAGCCTT 59.114 36.000 0.00 0.00 0.00 4.35
5913 6903 5.437060 TCTTGTTTTGAACTACAGAAGCCT 58.563 37.500 0.00 0.00 0.00 4.58
5914 6904 5.751243 TCTTGTTTTGAACTACAGAAGCC 57.249 39.130 0.00 0.00 0.00 4.35
5915 6905 7.009265 GGTTTTCTTGTTTTGAACTACAGAAGC 59.991 37.037 0.00 0.00 30.14 3.86
5916 6906 8.244113 AGGTTTTCTTGTTTTGAACTACAGAAG 58.756 33.333 0.00 0.00 30.14 2.85
5917 6907 8.117813 AGGTTTTCTTGTTTTGAACTACAGAA 57.882 30.769 0.00 0.00 0.00 3.02
5918 6908 7.696992 AGGTTTTCTTGTTTTGAACTACAGA 57.303 32.000 0.00 0.00 0.00 3.41
5919 6909 8.173321 CAAGGTTTTCTTGTTTTGAACTACAG 57.827 34.615 0.00 0.00 45.81 2.74
5932 6922 8.372031 GTTGAAGTCAATCCCAAGGTTTTCTTG 61.372 40.741 0.00 0.00 43.53 3.02
5933 6923 5.208121 TGAAGTCAATCCCAAGGTTTTCTT 58.792 37.500 0.00 0.00 35.79 2.52
5934 6924 4.803452 TGAAGTCAATCCCAAGGTTTTCT 58.197 39.130 0.00 0.00 0.00 2.52
5935 6925 5.289595 GTTGAAGTCAATCCCAAGGTTTTC 58.710 41.667 0.00 0.00 38.24 2.29
5936 6926 4.100963 GGTTGAAGTCAATCCCAAGGTTTT 59.899 41.667 0.00 0.00 38.24 2.43
5937 6927 3.641436 GGTTGAAGTCAATCCCAAGGTTT 59.359 43.478 0.00 0.00 38.24 3.27
5938 6928 3.230976 GGTTGAAGTCAATCCCAAGGTT 58.769 45.455 0.00 0.00 38.24 3.50
5939 6929 2.876581 GGTTGAAGTCAATCCCAAGGT 58.123 47.619 0.00 0.00 38.24 3.50
5946 6936 2.224769 TGGACCTGGGTTGAAGTCAATC 60.225 50.000 0.00 0.00 38.24 2.67
5947 6937 1.780309 TGGACCTGGGTTGAAGTCAAT 59.220 47.619 0.00 0.00 38.24 2.57
5948 6938 1.133915 GTGGACCTGGGTTGAAGTCAA 60.134 52.381 0.00 0.00 0.00 3.18
5949 6939 0.472471 GTGGACCTGGGTTGAAGTCA 59.528 55.000 0.00 0.00 0.00 3.41
5950 6940 0.602905 CGTGGACCTGGGTTGAAGTC 60.603 60.000 0.00 0.00 0.00 3.01
5951 6941 1.342672 ACGTGGACCTGGGTTGAAGT 61.343 55.000 0.00 0.00 0.00 3.01
5952 6942 0.884704 CACGTGGACCTGGGTTGAAG 60.885 60.000 7.95 0.00 0.00 3.02
5953 6943 1.147376 CACGTGGACCTGGGTTGAA 59.853 57.895 7.95 0.00 0.00 2.69
5954 6944 2.813726 CCACGTGGACCTGGGTTGA 61.814 63.158 31.31 0.00 37.39 3.18
5955 6945 2.281484 CCACGTGGACCTGGGTTG 60.281 66.667 31.31 0.00 37.39 3.77
5956 6946 2.446994 TCCACGTGGACCTGGGTT 60.447 61.111 33.23 0.00 39.78 4.11
5964 6954 3.509137 GAGCGTTGGTCCACGTGGA 62.509 63.158 33.23 33.23 42.43 4.02
5965 6955 3.041940 GAGCGTTGGTCCACGTGG 61.042 66.667 29.26 29.26 42.43 4.94
5966 6956 3.403057 CGAGCGTTGGTCCACGTG 61.403 66.667 9.08 9.08 42.43 4.49
5967 6957 2.927580 ATCGAGCGTTGGTCCACGT 61.928 57.895 13.14 0.00 42.43 4.49
5968 6958 2.126071 ATCGAGCGTTGGTCCACG 60.126 61.111 8.85 8.85 43.36 4.94
5969 6959 2.100631 CCATCGAGCGTTGGTCCAC 61.101 63.158 10.91 0.00 32.03 4.02
5970 6960 2.264480 CCATCGAGCGTTGGTCCA 59.736 61.111 10.91 0.00 32.03 4.02
5971 6961 3.195698 GCCATCGAGCGTTGGTCC 61.196 66.667 18.07 2.82 37.32 4.46
5972 6962 2.434185 TGCCATCGAGCGTTGGTC 60.434 61.111 18.07 12.22 37.32 4.02
5973 6963 2.434884 CTGCCATCGAGCGTTGGT 60.435 61.111 18.07 0.00 37.32 3.67
5974 6964 3.869272 GCTGCCATCGAGCGTTGG 61.869 66.667 14.00 14.00 37.87 3.77
5975 6965 3.869272 GGCTGCCATCGAGCGTTG 61.869 66.667 15.17 0.00 37.32 4.10
5979 6969 4.819761 TCACGGCTGCCATCGAGC 62.820 66.667 20.29 0.00 35.57 5.03
5980 6970 2.125552 TTCACGGCTGCCATCGAG 60.126 61.111 20.29 4.08 0.00 4.04
5981 6971 2.125552 CTTCACGGCTGCCATCGA 60.126 61.111 20.29 8.54 0.00 3.59
5982 6972 3.197790 CCTTCACGGCTGCCATCG 61.198 66.667 20.29 7.39 0.00 3.84
5991 6981 2.809601 CTCGGTTCGCCTTCACGG 60.810 66.667 0.00 0.00 34.30 4.94
5992 6982 2.049433 ACTCGGTTCGCCTTCACG 60.049 61.111 0.00 0.00 34.30 4.35
5993 6983 1.009389 CAGACTCGGTTCGCCTTCAC 61.009 60.000 0.00 0.00 34.30 3.18
5994 6984 1.176619 TCAGACTCGGTTCGCCTTCA 61.177 55.000 0.00 0.00 34.30 3.02
5995 6985 0.173708 ATCAGACTCGGTTCGCCTTC 59.826 55.000 0.00 0.00 34.30 3.46
5996 6986 0.608640 AATCAGACTCGGTTCGCCTT 59.391 50.000 0.00 0.00 34.30 4.35
5997 6987 0.108615 CAATCAGACTCGGTTCGCCT 60.109 55.000 0.00 0.00 34.30 5.52
5998 6988 1.084370 CCAATCAGACTCGGTTCGCC 61.084 60.000 0.00 0.00 0.00 5.54
5999 6989 0.389948 ACCAATCAGACTCGGTTCGC 60.390 55.000 0.00 0.00 0.00 4.70
6000 6990 1.202582 AGACCAATCAGACTCGGTTCG 59.797 52.381 0.00 0.00 0.00 3.95
6001 6991 2.494073 AGAGACCAATCAGACTCGGTTC 59.506 50.000 0.00 0.00 34.98 3.62
6002 6992 2.530701 AGAGACCAATCAGACTCGGTT 58.469 47.619 0.00 0.00 34.98 4.44
6003 6993 2.223803 AGAGACCAATCAGACTCGGT 57.776 50.000 0.00 0.00 34.98 4.69
6004 6994 2.493675 TGAAGAGACCAATCAGACTCGG 59.506 50.000 0.00 0.00 34.98 4.63
6005 6995 3.857549 TGAAGAGACCAATCAGACTCG 57.142 47.619 0.00 0.00 34.98 4.18
6006 6996 4.887748 TGTTGAAGAGACCAATCAGACTC 58.112 43.478 0.00 0.00 0.00 3.36
6007 6997 4.963318 TGTTGAAGAGACCAATCAGACT 57.037 40.909 0.00 0.00 0.00 3.24
6008 6998 5.059833 AGTTGTTGAAGAGACCAATCAGAC 58.940 41.667 0.00 0.00 0.00 3.51
6009 6999 5.296151 AGTTGTTGAAGAGACCAATCAGA 57.704 39.130 0.00 0.00 0.00 3.27
6010 7000 5.528690 TGAAGTTGTTGAAGAGACCAATCAG 59.471 40.000 0.00 0.00 0.00 2.90
6011 7001 5.436175 TGAAGTTGTTGAAGAGACCAATCA 58.564 37.500 0.00 0.00 0.00 2.57
6012 7002 6.377327 TTGAAGTTGTTGAAGAGACCAATC 57.623 37.500 0.00 0.00 0.00 2.67
6013 7003 6.239120 CCATTGAAGTTGTTGAAGAGACCAAT 60.239 38.462 0.00 0.00 0.00 3.16
6014 7004 5.067674 CCATTGAAGTTGTTGAAGAGACCAA 59.932 40.000 0.00 0.00 0.00 3.67
6015 7005 4.580167 CCATTGAAGTTGTTGAAGAGACCA 59.420 41.667 0.00 0.00 0.00 4.02
6016 7006 4.022849 CCCATTGAAGTTGTTGAAGAGACC 60.023 45.833 0.00 0.00 0.00 3.85
6017 7007 4.580580 ACCCATTGAAGTTGTTGAAGAGAC 59.419 41.667 0.00 0.00 0.00 3.36
6018 7008 4.792068 ACCCATTGAAGTTGTTGAAGAGA 58.208 39.130 0.00 0.00 0.00 3.10
6019 7009 5.520376 AACCCATTGAAGTTGTTGAAGAG 57.480 39.130 0.00 0.00 0.00 2.85
6020 7010 5.656416 AGAAACCCATTGAAGTTGTTGAAGA 59.344 36.000 0.00 0.00 0.00 2.87
6021 7011 5.906073 AGAAACCCATTGAAGTTGTTGAAG 58.094 37.500 0.00 0.00 0.00 3.02
6022 7012 5.420421 TGAGAAACCCATTGAAGTTGTTGAA 59.580 36.000 0.00 0.00 0.00 2.69
6023 7013 4.952957 TGAGAAACCCATTGAAGTTGTTGA 59.047 37.500 0.00 0.00 0.00 3.18
6024 7014 5.043248 GTGAGAAACCCATTGAAGTTGTTG 58.957 41.667 0.00 0.00 0.00 3.33
6025 7015 4.709397 TGTGAGAAACCCATTGAAGTTGTT 59.291 37.500 0.00 0.00 0.00 2.83
6026 7016 4.097892 GTGTGAGAAACCCATTGAAGTTGT 59.902 41.667 0.00 0.00 0.00 3.32
6027 7017 4.097741 TGTGTGAGAAACCCATTGAAGTTG 59.902 41.667 0.00 0.00 0.00 3.16
6028 7018 4.097892 GTGTGTGAGAAACCCATTGAAGTT 59.902 41.667 0.00 0.00 0.00 2.66
6029 7019 3.632145 GTGTGTGAGAAACCCATTGAAGT 59.368 43.478 0.00 0.00 0.00 3.01
6030 7020 3.885297 AGTGTGTGAGAAACCCATTGAAG 59.115 43.478 0.00 0.00 0.00 3.02
6031 7021 3.897239 AGTGTGTGAGAAACCCATTGAA 58.103 40.909 0.00 0.00 0.00 2.69
6032 7022 3.576078 AGTGTGTGAGAAACCCATTGA 57.424 42.857 0.00 0.00 0.00 2.57
6033 7023 4.320494 GCTAAGTGTGTGAGAAACCCATTG 60.320 45.833 0.00 0.00 0.00 2.82
6034 7024 3.821033 GCTAAGTGTGTGAGAAACCCATT 59.179 43.478 0.00 0.00 0.00 3.16
6035 7025 3.073062 AGCTAAGTGTGTGAGAAACCCAT 59.927 43.478 0.00 0.00 0.00 4.00
6036 7026 2.438021 AGCTAAGTGTGTGAGAAACCCA 59.562 45.455 0.00 0.00 0.00 4.51
6037 7027 2.808543 CAGCTAAGTGTGTGAGAAACCC 59.191 50.000 0.00 0.00 0.00 4.11
6038 7028 3.728845 TCAGCTAAGTGTGTGAGAAACC 58.271 45.455 0.00 0.00 0.00 3.27
6039 7029 3.185391 GCTCAGCTAAGTGTGTGAGAAAC 59.815 47.826 2.40 0.00 39.04 2.78
6040 7030 3.181466 TGCTCAGCTAAGTGTGTGAGAAA 60.181 43.478 0.00 0.00 39.04 2.52
6041 7031 2.365293 TGCTCAGCTAAGTGTGTGAGAA 59.635 45.455 0.00 0.00 39.04 2.87
6042 7032 1.963515 TGCTCAGCTAAGTGTGTGAGA 59.036 47.619 0.00 0.00 39.04 3.27
6043 7033 2.445565 TGCTCAGCTAAGTGTGTGAG 57.554 50.000 0.00 0.00 39.60 3.51
6044 7034 2.908688 TTGCTCAGCTAAGTGTGTGA 57.091 45.000 0.00 0.00 0.00 3.58
6045 7035 3.133691 TCTTTGCTCAGCTAAGTGTGTG 58.866 45.455 18.68 0.00 40.91 3.82
6046 7036 3.397482 CTCTTTGCTCAGCTAAGTGTGT 58.603 45.455 18.68 0.00 40.91 3.72
6047 7037 2.159234 GCTCTTTGCTCAGCTAAGTGTG 59.841 50.000 18.68 11.95 40.91 3.82
6048 7038 2.421619 GCTCTTTGCTCAGCTAAGTGT 58.578 47.619 18.68 0.00 40.91 3.55
6060 7050 3.555139 CAGCATCTACACTAGCTCTTTGC 59.445 47.826 0.00 0.00 43.29 3.68
6061 7051 3.555139 GCAGCATCTACACTAGCTCTTTG 59.445 47.826 0.00 0.00 34.61 2.77
6062 7052 3.450457 AGCAGCATCTACACTAGCTCTTT 59.550 43.478 0.00 0.00 34.61 2.52
6063 7053 3.030291 AGCAGCATCTACACTAGCTCTT 58.970 45.455 0.00 0.00 34.61 2.85
6064 7054 2.665165 AGCAGCATCTACACTAGCTCT 58.335 47.619 0.00 0.00 34.61 4.09
6065 7055 4.576216 TTAGCAGCATCTACACTAGCTC 57.424 45.455 0.00 0.00 34.61 4.09
6066 7056 4.646945 TCTTTAGCAGCATCTACACTAGCT 59.353 41.667 0.00 0.00 37.95 3.32
6067 7057 4.938080 TCTTTAGCAGCATCTACACTAGC 58.062 43.478 0.00 0.00 0.00 3.42
6068 7058 6.743110 TCATCTTTAGCAGCATCTACACTAG 58.257 40.000 0.00 0.00 0.00 2.57
6069 7059 6.322456 ACTCATCTTTAGCAGCATCTACACTA 59.678 38.462 0.00 0.00 0.00 2.74
6070 7060 5.128499 ACTCATCTTTAGCAGCATCTACACT 59.872 40.000 0.00 0.00 0.00 3.55
6071 7061 5.355596 ACTCATCTTTAGCAGCATCTACAC 58.644 41.667 0.00 0.00 0.00 2.90
6072 7062 5.595885 GACTCATCTTTAGCAGCATCTACA 58.404 41.667 0.00 0.00 0.00 2.74
6073 7063 4.679197 CGACTCATCTTTAGCAGCATCTAC 59.321 45.833 0.00 0.00 0.00 2.59
6074 7064 4.794329 GCGACTCATCTTTAGCAGCATCTA 60.794 45.833 0.00 0.00 0.00 1.98
6075 7065 3.715495 CGACTCATCTTTAGCAGCATCT 58.285 45.455 0.00 0.00 0.00 2.90
6076 7066 2.220593 GCGACTCATCTTTAGCAGCATC 59.779 50.000 0.00 0.00 0.00 3.91
6077 7067 2.208431 GCGACTCATCTTTAGCAGCAT 58.792 47.619 0.00 0.00 0.00 3.79
6078 7068 1.066929 TGCGACTCATCTTTAGCAGCA 60.067 47.619 0.00 0.00 0.00 4.41
6079 7069 1.592081 CTGCGACTCATCTTTAGCAGC 59.408 52.381 2.27 0.00 44.09 5.25
6081 7071 2.493675 AGACTGCGACTCATCTTTAGCA 59.506 45.455 0.00 0.00 0.00 3.49
6082 7072 2.857152 CAGACTGCGACTCATCTTTAGC 59.143 50.000 0.00 0.00 0.00 3.09
6083 7073 4.362932 TCAGACTGCGACTCATCTTTAG 57.637 45.455 0.00 0.00 0.00 1.85
6084 7074 4.459337 TCTTCAGACTGCGACTCATCTTTA 59.541 41.667 0.00 0.00 0.00 1.85
6085 7075 3.256879 TCTTCAGACTGCGACTCATCTTT 59.743 43.478 0.00 0.00 0.00 2.52
6086 7076 2.822561 TCTTCAGACTGCGACTCATCTT 59.177 45.455 0.00 0.00 0.00 2.40
6087 7077 2.163412 GTCTTCAGACTGCGACTCATCT 59.837 50.000 14.02 0.00 41.65 2.90
6088 7078 2.525055 GTCTTCAGACTGCGACTCATC 58.475 52.381 14.02 0.00 41.65 2.92
6089 7079 1.203523 GGTCTTCAGACTGCGACTCAT 59.796 52.381 18.20 0.00 44.20 2.90
6090 7080 0.598562 GGTCTTCAGACTGCGACTCA 59.401 55.000 18.20 0.00 44.20 3.41
6091 7081 0.109039 GGGTCTTCAGACTGCGACTC 60.109 60.000 18.20 13.65 44.20 3.36
6092 7082 0.540830 AGGGTCTTCAGACTGCGACT 60.541 55.000 18.20 3.86 44.20 4.18
6093 7083 0.389166 CAGGGTCTTCAGACTGCGAC 60.389 60.000 13.29 13.29 44.20 5.19
6094 7084 0.539669 TCAGGGTCTTCAGACTGCGA 60.540 55.000 6.91 0.00 44.20 5.10
6095 7085 0.318441 TTCAGGGTCTTCAGACTGCG 59.682 55.000 6.91 0.00 44.20 5.18
6096 7086 1.609320 GGTTCAGGGTCTTCAGACTGC 60.609 57.143 6.91 0.00 44.20 4.40
6097 7087 1.694150 TGGTTCAGGGTCTTCAGACTG 59.306 52.381 6.91 0.00 44.20 3.51
6098 7088 1.694696 GTGGTTCAGGGTCTTCAGACT 59.305 52.381 6.91 0.00 44.20 3.24
6099 7089 1.694696 AGTGGTTCAGGGTCTTCAGAC 59.305 52.381 0.00 0.00 44.04 3.51
6100 7090 1.694150 CAGTGGTTCAGGGTCTTCAGA 59.306 52.381 0.00 0.00 0.00 3.27
6101 7091 1.694150 TCAGTGGTTCAGGGTCTTCAG 59.306 52.381 0.00 0.00 0.00 3.02
6102 7092 1.801242 TCAGTGGTTCAGGGTCTTCA 58.199 50.000 0.00 0.00 0.00 3.02
6103 7093 2.772287 CTTCAGTGGTTCAGGGTCTTC 58.228 52.381 0.00 0.00 0.00 2.87
6104 7094 1.202818 GCTTCAGTGGTTCAGGGTCTT 60.203 52.381 0.00 0.00 0.00 3.01
6105 7095 0.398318 GCTTCAGTGGTTCAGGGTCT 59.602 55.000 0.00 0.00 0.00 3.85
6106 7096 0.606673 GGCTTCAGTGGTTCAGGGTC 60.607 60.000 0.00 0.00 0.00 4.46
6107 7097 1.352622 TGGCTTCAGTGGTTCAGGGT 61.353 55.000 0.00 0.00 0.00 4.34
6108 7098 0.607489 CTGGCTTCAGTGGTTCAGGG 60.607 60.000 0.00 0.00 33.96 4.45
6109 7099 2.938354 CTGGCTTCAGTGGTTCAGG 58.062 57.895 0.00 0.00 33.96 3.86
6118 7108 3.117491 TGACTTCTTCACTGGCTTCAG 57.883 47.619 0.00 0.00 43.84 3.02
6119 7109 3.558931 TTGACTTCTTCACTGGCTTCA 57.441 42.857 0.00 0.00 32.26 3.02
6120 7110 3.251972 CCTTTGACTTCTTCACTGGCTTC 59.748 47.826 0.00 0.00 32.26 3.86
6121 7111 3.217626 CCTTTGACTTCTTCACTGGCTT 58.782 45.455 0.00 0.00 32.26 4.35
6122 7112 2.856222 CCTTTGACTTCTTCACTGGCT 58.144 47.619 0.00 0.00 32.26 4.75
6123 7113 1.268079 GCCTTTGACTTCTTCACTGGC 59.732 52.381 0.00 0.00 42.32 4.85
6124 7114 2.856222 AGCCTTTGACTTCTTCACTGG 58.144 47.619 0.00 0.00 32.26 4.00
6125 7115 3.879295 TGAAGCCTTTGACTTCTTCACTG 59.121 43.478 5.24 0.00 43.23 3.66
6126 7116 4.156455 TGAAGCCTTTGACTTCTTCACT 57.844 40.909 5.24 0.00 43.23 3.41
6127 7117 4.261363 CCTTGAAGCCTTTGACTTCTTCAC 60.261 45.833 3.35 0.00 42.94 3.18
6128 7118 3.885297 CCTTGAAGCCTTTGACTTCTTCA 59.115 43.478 5.24 0.00 43.23 3.02
6129 7119 3.885901 ACCTTGAAGCCTTTGACTTCTTC 59.114 43.478 5.24 0.00 43.23 2.87
6130 7120 3.885901 GACCTTGAAGCCTTTGACTTCTT 59.114 43.478 5.24 0.00 43.23 2.52
6131 7121 3.137360 AGACCTTGAAGCCTTTGACTTCT 59.863 43.478 5.24 0.00 43.23 2.85
6132 7122 3.251972 CAGACCTTGAAGCCTTTGACTTC 59.748 47.826 0.00 0.00 43.15 3.01
6133 7123 3.217626 CAGACCTTGAAGCCTTTGACTT 58.782 45.455 0.00 0.00 0.00 3.01
6134 7124 2.856222 CAGACCTTGAAGCCTTTGACT 58.144 47.619 0.00 0.00 0.00 3.41
6135 7125 1.268079 GCAGACCTTGAAGCCTTTGAC 59.732 52.381 0.00 0.00 0.00 3.18
6136 7126 1.609208 GCAGACCTTGAAGCCTTTGA 58.391 50.000 0.00 0.00 0.00 2.69
6137 7127 0.600057 GGCAGACCTTGAAGCCTTTG 59.400 55.000 0.00 0.00 43.70 2.77
6138 7128 3.042481 GGCAGACCTTGAAGCCTTT 57.958 52.632 0.00 0.00 43.70 3.11
6139 7129 4.830573 GGCAGACCTTGAAGCCTT 57.169 55.556 0.00 0.00 43.70 4.35
6149 7139 0.250901 TTTTGGAGCAGAGGCAGACC 60.251 55.000 0.00 0.00 44.61 3.85
6150 7140 1.163554 CTTTTGGAGCAGAGGCAGAC 58.836 55.000 0.00 0.00 44.61 3.51
6151 7141 0.767375 ACTTTTGGAGCAGAGGCAGA 59.233 50.000 0.00 0.00 44.61 4.26
6152 7142 1.613836 AACTTTTGGAGCAGAGGCAG 58.386 50.000 0.00 0.00 44.61 4.85
6153 7143 1.956477 GAAACTTTTGGAGCAGAGGCA 59.044 47.619 0.00 0.00 44.61 4.75
6154 7144 1.956477 TGAAACTTTTGGAGCAGAGGC 59.044 47.619 0.00 0.00 41.61 4.70
6155 7145 3.885297 TCTTGAAACTTTTGGAGCAGAGG 59.115 43.478 0.00 0.00 0.00 3.69
6156 7146 4.578105 ACTCTTGAAACTTTTGGAGCAGAG 59.422 41.667 0.00 0.00 0.00 3.35
6157 7147 4.336433 CACTCTTGAAACTTTTGGAGCAGA 59.664 41.667 0.00 0.00 0.00 4.26
6158 7148 4.336433 TCACTCTTGAAACTTTTGGAGCAG 59.664 41.667 0.00 0.00 0.00 4.24
6159 7149 4.269183 TCACTCTTGAAACTTTTGGAGCA 58.731 39.130 0.00 0.00 0.00 4.26
6160 7150 4.900635 TCACTCTTGAAACTTTTGGAGC 57.099 40.909 0.00 0.00 0.00 4.70
6161 7151 5.277047 GCTTCACTCTTGAAACTTTTGGAG 58.723 41.667 0.00 0.00 41.34 3.86
6162 7152 4.097892 GGCTTCACTCTTGAAACTTTTGGA 59.902 41.667 0.00 0.00 41.34 3.53
6163 7153 4.142182 TGGCTTCACTCTTGAAACTTTTGG 60.142 41.667 0.00 0.00 41.34 3.28
6164 7154 4.997565 TGGCTTCACTCTTGAAACTTTTG 58.002 39.130 0.00 0.00 41.34 2.44
6165 7155 5.859205 ATGGCTTCACTCTTGAAACTTTT 57.141 34.783 0.00 0.00 41.34 2.27
6166 7156 5.360714 TCAATGGCTTCACTCTTGAAACTTT 59.639 36.000 0.00 0.00 41.34 2.66
6167 7157 4.889409 TCAATGGCTTCACTCTTGAAACTT 59.111 37.500 0.00 0.00 41.34 2.66
6168 7158 4.464008 TCAATGGCTTCACTCTTGAAACT 58.536 39.130 0.00 0.00 41.34 2.66
6169 7159 4.836125 TCAATGGCTTCACTCTTGAAAC 57.164 40.909 0.00 0.00 41.34 2.78
6170 7160 5.850557 TTTCAATGGCTTCACTCTTGAAA 57.149 34.783 5.03 5.03 41.34 2.69
6171 7161 5.850557 TTTTCAATGGCTTCACTCTTGAA 57.149 34.783 0.00 0.00 39.55 2.69
6172 7162 6.218019 CAATTTTCAATGGCTTCACTCTTGA 58.782 36.000 0.00 0.00 0.00 3.02
6173 7163 5.107220 GCAATTTTCAATGGCTTCACTCTTG 60.107 40.000 0.00 0.00 0.00 3.02
6174 7164 4.992951 GCAATTTTCAATGGCTTCACTCTT 59.007 37.500 0.00 0.00 0.00 2.85
6175 7165 4.039488 TGCAATTTTCAATGGCTTCACTCT 59.961 37.500 0.00 0.00 0.00 3.24
6176 7166 4.151157 GTGCAATTTTCAATGGCTTCACTC 59.849 41.667 0.00 0.00 0.00 3.51
6177 7167 4.060205 GTGCAATTTTCAATGGCTTCACT 58.940 39.130 0.00 0.00 0.00 3.41
6178 7168 3.187022 GGTGCAATTTTCAATGGCTTCAC 59.813 43.478 0.00 0.00 0.00 3.18
6179 7169 3.071312 AGGTGCAATTTTCAATGGCTTCA 59.929 39.130 0.00 0.00 0.00 3.02
6180 7170 3.667360 AGGTGCAATTTTCAATGGCTTC 58.333 40.909 0.00 0.00 0.00 3.86
6181 7171 3.775261 AGGTGCAATTTTCAATGGCTT 57.225 38.095 0.00 0.00 0.00 4.35
6182 7172 3.325716 AGAAGGTGCAATTTTCAATGGCT 59.674 39.130 0.00 0.00 0.00 4.75
6183 7173 3.434299 CAGAAGGTGCAATTTTCAATGGC 59.566 43.478 0.00 0.00 0.00 4.40
6184 7174 4.885413 TCAGAAGGTGCAATTTTCAATGG 58.115 39.130 0.00 0.00 0.00 3.16
6185 7175 6.091713 GGATTCAGAAGGTGCAATTTTCAATG 59.908 38.462 0.00 0.00 0.00 2.82
6186 7176 6.168389 GGATTCAGAAGGTGCAATTTTCAAT 58.832 36.000 0.00 0.00 0.00 2.57
6187 7177 5.070180 TGGATTCAGAAGGTGCAATTTTCAA 59.930 36.000 0.00 0.00 0.00 2.69
6188 7178 4.588106 TGGATTCAGAAGGTGCAATTTTCA 59.412 37.500 0.00 0.00 0.00 2.69
6189 7179 5.138125 TGGATTCAGAAGGTGCAATTTTC 57.862 39.130 0.00 0.00 0.00 2.29
6190 7180 4.590222 ACTGGATTCAGAAGGTGCAATTTT 59.410 37.500 8.39 0.00 43.49 1.82
6191 7181 4.021719 CACTGGATTCAGAAGGTGCAATTT 60.022 41.667 8.39 0.00 43.49 1.82
6192 7182 3.508793 CACTGGATTCAGAAGGTGCAATT 59.491 43.478 8.39 0.00 43.49 2.32
6193 7183 3.087031 CACTGGATTCAGAAGGTGCAAT 58.913 45.455 8.39 0.00 43.49 3.56
6194 7184 2.158623 ACACTGGATTCAGAAGGTGCAA 60.159 45.455 8.39 0.00 43.49 4.08
6195 7185 1.421268 ACACTGGATTCAGAAGGTGCA 59.579 47.619 8.39 0.00 43.49 4.57
6196 7186 1.808945 CACACTGGATTCAGAAGGTGC 59.191 52.381 8.39 0.00 43.49 5.01
6197 7187 1.808945 GCACACTGGATTCAGAAGGTG 59.191 52.381 8.39 13.40 43.49 4.00
6198 7188 1.421268 TGCACACTGGATTCAGAAGGT 59.579 47.619 8.39 0.00 43.49 3.50
6199 7189 2.189594 TGCACACTGGATTCAGAAGG 57.810 50.000 8.39 0.00 43.49 3.46
6206 7196 3.755378 GTCTTCAGAATGCACACTGGATT 59.245 43.478 17.88 0.00 41.19 3.01
6207 7197 3.341823 GTCTTCAGAATGCACACTGGAT 58.658 45.455 17.88 0.00 34.76 3.41
6208 7198 2.550855 GGTCTTCAGAATGCACACTGGA 60.551 50.000 17.88 11.14 34.76 3.86
6209 7199 1.808945 GGTCTTCAGAATGCACACTGG 59.191 52.381 17.88 6.90 34.76 4.00
6210 7200 1.808945 GGGTCTTCAGAATGCACACTG 59.191 52.381 13.65 13.65 34.76 3.66
6211 7201 1.609061 CGGGTCTTCAGAATGCACACT 60.609 52.381 0.00 0.00 34.76 3.55
6212 7202 0.798776 CGGGTCTTCAGAATGCACAC 59.201 55.000 0.00 0.00 34.76 3.82
6213 7203 0.396435 ACGGGTCTTCAGAATGCACA 59.604 50.000 0.00 0.00 34.76 4.57
6214 7204 1.079503 GACGGGTCTTCAGAATGCAC 58.920 55.000 0.00 0.00 34.76 4.57
6215 7205 0.976641 AGACGGGTCTTCAGAATGCA 59.023 50.000 0.00 0.00 36.31 3.96
6216 7206 1.646189 GAGACGGGTCTTCAGAATGC 58.354 55.000 2.39 0.00 40.61 3.56
6217 7207 1.202582 ACGAGACGGGTCTTCAGAATG 59.797 52.381 2.39 0.00 40.61 2.67
6218 7208 1.546961 ACGAGACGGGTCTTCAGAAT 58.453 50.000 2.39 0.00 40.61 2.40
6219 7209 1.808945 GTACGAGACGGGTCTTCAGAA 59.191 52.381 2.39 0.00 40.61 3.02
6220 7210 1.002888 AGTACGAGACGGGTCTTCAGA 59.997 52.381 2.39 0.00 40.61 3.27
6221 7211 1.451067 AGTACGAGACGGGTCTTCAG 58.549 55.000 2.39 1.29 40.61 3.02
6222 7212 1.808945 GAAGTACGAGACGGGTCTTCA 59.191 52.381 2.39 0.00 40.61 3.02
6223 7213 2.083002 AGAAGTACGAGACGGGTCTTC 58.917 52.381 2.39 0.00 40.61 2.87
6224 7214 1.811359 CAGAAGTACGAGACGGGTCTT 59.189 52.381 2.39 0.00 40.61 3.01
6225 7215 1.271271 ACAGAAGTACGAGACGGGTCT 60.271 52.381 0.00 0.00 43.78 3.85
6226 7216 1.163554 ACAGAAGTACGAGACGGGTC 58.836 55.000 0.00 0.00 0.00 4.46
6227 7217 2.479566 TACAGAAGTACGAGACGGGT 57.520 50.000 0.00 0.00 0.00 5.28
6228 7218 3.438087 TCTTTACAGAAGTACGAGACGGG 59.562 47.826 0.00 0.00 0.00 5.28
6229 7219 4.675190 TCTTTACAGAAGTACGAGACGG 57.325 45.455 0.00 0.00 0.00 4.79


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.