Multiple sequence alignment - TraesCS5B01G300800

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G300800 chr5B 100.000 5342 0 0 1 5342 485902038 485907379 0.000000e+00 9865.0
1 TraesCS5B01G300800 chr5B 89.822 619 34 7 4686 5295 629939254 629938656 0.000000e+00 767.0
2 TraesCS5B01G300800 chr5B 84.549 233 30 4 4502 4729 589116830 589116599 5.380000e-55 226.0
3 TraesCS5B01G300800 chr5B 86.070 201 13 10 2248 2440 485904098 485904291 9.070000e-48 202.0
4 TraesCS5B01G300800 chr5B 86.070 201 13 10 2061 2254 485904285 485904477 9.070000e-48 202.0
5 TraesCS5B01G300800 chr5B 84.746 177 16 6 3474 3648 589117942 589117775 3.310000e-37 167.0
6 TraesCS5B01G300800 chr5B 91.139 79 7 0 771 849 569912774 569912852 2.030000e-19 108.0
7 TraesCS5B01G300800 chr5B 91.803 61 5 0 712 772 87647421 87647481 9.530000e-13 86.1
8 TraesCS5B01G300800 chr5D 91.016 3150 163 67 2248 5342 404494059 404497143 0.000000e+00 4139.0
9 TraesCS5B01G300800 chr5D 90.107 1496 94 28 771 2254 404492791 404494244 0.000000e+00 1893.0
10 TraesCS5B01G300800 chr5D 83.668 747 86 23 3999 4722 480702812 480702079 0.000000e+00 671.0
11 TraesCS5B01G300800 chr5D 89.602 452 17 11 92 527 404492009 404492446 1.010000e-151 547.0
12 TraesCS5B01G300800 chr5D 90.816 98 8 1 10 107 404490681 404490777 4.340000e-26 130.0
13 TraesCS5B01G300800 chr5D 90.217 92 7 2 760 849 57849911 57850002 9.400000e-23 119.0
14 TraesCS5B01G300800 chr5D 91.139 79 7 0 771 849 151671688 151671610 2.030000e-19 108.0
15 TraesCS5B01G300800 chr5A 94.093 1405 67 13 3121 4517 509655596 509654200 0.000000e+00 2121.0
16 TraesCS5B01G300800 chr5A 89.886 702 51 13 1561 2254 509656958 509656269 0.000000e+00 885.0
17 TraesCS5B01G300800 chr5A 89.865 592 38 12 887 1467 509657794 509657214 0.000000e+00 741.0
18 TraesCS5B01G300800 chr5A 92.099 443 17 4 4903 5342 509654205 509653778 4.570000e-170 608.0
19 TraesCS5B01G300800 chr5A 91.051 447 10 7 102 527 509658700 509658263 1.290000e-160 577.0
20 TraesCS5B01G300800 chr5A 89.277 401 29 5 2515 2907 509656204 509655810 1.730000e-134 490.0
21 TraesCS5B01G300800 chr5A 81.493 643 57 29 3999 4630 599799938 599799347 6.260000e-129 472.0
22 TraesCS5B01G300800 chr5A 86.441 177 21 2 3474 3648 599800452 599800277 1.960000e-44 191.0
23 TraesCS5B01G300800 chr5A 82.843 204 14 17 2251 2444 509656458 509656266 4.280000e-36 163.0
24 TraesCS5B01G300800 chr5A 90.083 121 11 1 604 724 665469609 665469728 7.160000e-34 156.0
25 TraesCS5B01G300800 chr5A 96.053 76 2 1 1505 1580 509657058 509656984 7.270000e-24 122.0
26 TraesCS5B01G300800 chr5A 92.405 79 6 0 771 849 17604098 17604176 4.370000e-21 113.0
27 TraesCS5B01G300800 chr2A 84.664 952 118 14 4053 4980 13037113 13036166 0.000000e+00 924.0
28 TraesCS5B01G300800 chr2A 89.326 178 19 0 3454 3631 517494 517671 1.940000e-54 224.0
29 TraesCS5B01G300800 chr2A 78.421 380 41 20 3498 3863 659739418 659739770 5.420000e-50 209.0
30 TraesCS5B01G300800 chr2B 89.499 619 35 8 4686 5295 787323234 787323831 0.000000e+00 756.0
31 TraesCS5B01G300800 chr2B 80.583 721 79 31 3377 4077 10773362 10774041 2.870000e-137 499.0
32 TraesCS5B01G300800 chr2B 90.857 175 16 0 3457 3631 10802819 10802645 8.940000e-58 235.0
33 TraesCS5B01G300800 chr2B 90.071 141 14 0 3182 3322 10772974 10773114 3.290000e-42 183.0
34 TraesCS5B01G300800 chr2B 81.951 205 19 10 3697 3890 10796903 10796706 1.990000e-34 158.0
35 TraesCS5B01G300800 chr2D 82.360 890 122 17 4119 4983 12579269 12578390 0.000000e+00 741.0
36 TraesCS5B01G300800 chr2D 83.284 335 30 14 3454 3783 530924 531237 8.760000e-73 285.0
37 TraesCS5B01G300800 chr2D 91.111 90 6 2 532 620 617215322 617215234 2.610000e-23 121.0
38 TraesCS5B01G300800 chr2D 91.304 46 4 0 1107 1152 12579473 12579428 4.470000e-06 63.9
39 TraesCS5B01G300800 chr3A 78.684 380 40 20 3498 3863 19636734 19637086 1.170000e-51 215.0
40 TraesCS5B01G300800 chr3A 91.964 112 8 1 611 722 638982542 638982432 7.160000e-34 156.0
41 TraesCS5B01G300800 chr1D 78.421 380 41 21 3498 3863 32537460 32537812 5.420000e-50 209.0
42 TraesCS5B01G300800 chr1D 87.692 130 14 2 593 722 73714837 73714964 3.330000e-32 150.0
43 TraesCS5B01G300800 chr1D 91.111 90 7 1 532 620 435937527 435937616 2.610000e-23 121.0
44 TraesCS5B01G300800 chr1D 91.860 86 5 2 533 616 74927425 74927510 9.400000e-23 119.0
45 TraesCS5B01G300800 chr1D 90.000 90 8 1 528 616 483951397 483951486 1.220000e-21 115.0
46 TraesCS5B01G300800 chr3D 94.495 109 5 1 614 722 429304402 429304509 3.310000e-37 167.0
47 TraesCS5B01G300800 chr3D 93.636 110 6 1 615 724 357639302 357639194 4.280000e-36 163.0
48 TraesCS5B01G300800 chr3D 91.111 90 7 1 528 616 554419620 554419709 2.610000e-23 121.0
49 TraesCS5B01G300800 chr3D 91.139 79 7 0 771 849 291225773 291225695 2.030000e-19 108.0
50 TraesCS5B01G300800 chr3B 92.857 112 7 1 611 722 705143333 705143443 1.540000e-35 161.0
51 TraesCS5B01G300800 chr7D 90.244 123 11 1 602 724 545096035 545095914 5.540000e-35 159.0
52 TraesCS5B01G300800 chr7D 90.426 94 8 1 528 620 598451689 598451782 7.270000e-24 122.0
53 TraesCS5B01G300800 chr6B 86.207 145 17 3 614 757 544804605 544804463 2.580000e-33 154.0
54 TraesCS5B01G300800 chr6B 90.083 121 9 3 615 734 576017139 576017021 2.580000e-33 154.0
55 TraesCS5B01G300800 chr6D 91.111 90 6 2 533 620 221986527 221986438 2.610000e-23 121.0
56 TraesCS5B01G300800 chr6D 91.011 89 7 1 533 620 17358352 17358264 9.400000e-23 119.0
57 TraesCS5B01G300800 chrUn 90.217 92 8 1 532 622 86970710 86970801 9.400000e-23 119.0
58 TraesCS5B01G300800 chrUn 91.139 79 7 0 771 849 42175665 42175587 2.030000e-19 108.0
59 TraesCS5B01G300800 chr1B 91.139 79 7 0 771 849 310100908 310100830 2.030000e-19 108.0
60 TraesCS5B01G300800 chr1B 87.912 91 8 3 771 859 3768618 3768707 2.630000e-18 104.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G300800 chr5B 485902038 485907379 5341 False 3423.000 9865 90.713333 1 5342 3 chr5B.!!$F3 5341
1 TraesCS5B01G300800 chr5B 629938656 629939254 598 True 767.000 767 89.822000 4686 5295 1 chr5B.!!$R1 609
2 TraesCS5B01G300800 chr5D 404490681 404497143 6462 False 1677.250 4139 90.385250 10 5342 4 chr5D.!!$F2 5332
3 TraesCS5B01G300800 chr5D 480702079 480702812 733 True 671.000 671 83.668000 3999 4722 1 chr5D.!!$R2 723
4 TraesCS5B01G300800 chr5A 509653778 509658700 4922 True 713.375 2121 90.645875 102 5342 8 chr5A.!!$R1 5240
5 TraesCS5B01G300800 chr5A 599799347 599800452 1105 True 331.500 472 83.967000 3474 4630 2 chr5A.!!$R2 1156
6 TraesCS5B01G300800 chr2A 13036166 13037113 947 True 924.000 924 84.664000 4053 4980 1 chr2A.!!$R1 927
7 TraesCS5B01G300800 chr2B 787323234 787323831 597 False 756.000 756 89.499000 4686 5295 1 chr2B.!!$F1 609
8 TraesCS5B01G300800 chr2B 10772974 10774041 1067 False 341.000 499 85.327000 3182 4077 2 chr2B.!!$F2 895
9 TraesCS5B01G300800 chr2D 12578390 12579473 1083 True 402.450 741 86.832000 1107 4983 2 chr2D.!!$R2 3876

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
128 1376 0.034574 AGCCGCCACCAATGTATGAA 60.035 50.0 0.00 0.0 0.00 2.57 F
1009 2628 0.105555 AGCCAGAGAGATGGAGAGGG 60.106 60.0 0.00 0.0 43.57 4.30 F
1229 2857 0.253044 CCCGCTTCCATCTTCTTCCA 59.747 55.0 0.00 0.0 0.00 3.53 F
2508 4324 0.179018 GAGCTGACAACCCCACTTGT 60.179 55.0 0.00 0.0 37.06 3.16 F
3446 5581 0.251209 TCCAGGTGCACTACGAGACT 60.251 55.0 17.98 0.0 0.00 3.24 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2073 3881 0.105593 CCCAGCGCATATCACTGTCT 59.894 55.000 11.47 0.00 0.00 3.41 R
2482 4298 0.250513 GGGTTGTCAGCTCCACTAGG 59.749 60.000 0.00 0.00 0.00 3.02 R
3224 5166 0.037232 GCTCGTACCCTTTGAGTGCT 60.037 55.000 0.00 0.00 32.32 4.40 R
3911 6070 2.176546 CCAACTGTTGCGCCATCG 59.823 61.111 14.94 0.00 39.07 3.84 R
4866 7127 0.689055 ATTCTGCAGCTGACCTGACA 59.311 50.000 20.43 3.32 44.64 3.58 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 0.037046 ACACCCGTCCATTTACGTCC 60.037 55.000 0.00 0.00 41.27 4.79
38 39 2.888534 CCGCGTATTGGACCGTGG 60.889 66.667 4.92 0.00 46.75 4.94
44 45 1.730064 CGTATTGGACCGTGGTTTCTG 59.270 52.381 0.00 0.00 0.00 3.02
48 49 1.666872 GGACCGTGGTTTCTGTCCG 60.667 63.158 0.00 0.00 38.07 4.79
53 54 4.287781 TGGTTTCTGTCCGCGCGA 62.288 61.111 34.63 15.16 0.00 5.87
55 56 2.388232 GGTTTCTGTCCGCGCGAAT 61.388 57.895 34.63 0.00 0.00 3.34
68 69 2.554656 GCGAATCCAAATGAACGCG 58.445 52.632 3.53 3.53 40.72 6.01
128 1376 0.034574 AGCCGCCACCAATGTATGAA 60.035 50.000 0.00 0.00 0.00 2.57
249 1501 3.136763 CCAGCAATCACATACAGGCTAG 58.863 50.000 0.00 0.00 0.00 3.42
250 1502 2.547211 CAGCAATCACATACAGGCTAGC 59.453 50.000 6.04 6.04 0.00 3.42
251 1503 2.171237 AGCAATCACATACAGGCTAGCA 59.829 45.455 18.24 0.00 0.00 3.49
299 1557 1.816961 GCATGGGATGGATGAGTGGAC 60.817 57.143 0.00 0.00 0.00 4.02
466 1739 1.738099 ACACGAGCATCTCCAACGC 60.738 57.895 0.00 0.00 0.00 4.84
467 1740 2.507102 ACGAGCATCTCCAACGCG 60.507 61.111 3.53 3.53 0.00 6.01
468 1741 3.257561 CGAGCATCTCCAACGCGG 61.258 66.667 12.47 0.00 0.00 6.46
469 1742 2.184322 GAGCATCTCCAACGCGGA 59.816 61.111 12.47 0.00 43.61 5.54
470 1743 1.447838 GAGCATCTCCAACGCGGAA 60.448 57.895 12.47 0.00 45.75 4.30
471 1744 0.811616 GAGCATCTCCAACGCGGAAT 60.812 55.000 12.47 0.00 45.75 3.01
472 1745 0.811616 AGCATCTCCAACGCGGAATC 60.812 55.000 12.47 0.00 45.75 2.52
473 1746 1.927210 CATCTCCAACGCGGAATCG 59.073 57.895 12.47 0.00 45.75 3.34
509 1782 0.868406 CCGCTTTTCACACTCACTCC 59.132 55.000 0.00 0.00 0.00 3.85
527 1800 2.265739 CTCTGCTACAAGCCGCCA 59.734 61.111 0.00 0.00 41.51 5.69
531 1846 0.387239 CTGCTACAAGCCGCCAAAAC 60.387 55.000 0.00 0.00 41.51 2.43
532 1847 1.080772 GCTACAAGCCGCCAAAACC 60.081 57.895 0.00 0.00 34.48 3.27
545 1860 5.008217 GCCGCCAAAACCTTTTAAAGATTTT 59.992 36.000 4.08 4.08 0.00 1.82
547 1862 7.570507 GCCGCCAAAACCTTTTAAAGATTTTAG 60.571 37.037 9.21 4.22 0.00 1.85
548 1863 7.439955 CCGCCAAAACCTTTTAAAGATTTTAGT 59.560 33.333 9.21 0.00 0.00 2.24
549 1864 9.465985 CGCCAAAACCTTTTAAAGATTTTAGTA 57.534 29.630 9.21 0.00 0.00 1.82
609 1924 8.659925 AAGTATAGATTCACTCATTTGCTCAG 57.340 34.615 0.00 0.00 0.00 3.35
610 1925 7.790027 AGTATAGATTCACTCATTTGCTCAGT 58.210 34.615 0.00 0.00 0.00 3.41
611 1926 8.918116 AGTATAGATTCACTCATTTGCTCAGTA 58.082 33.333 0.00 0.00 0.00 2.74
612 1927 9.703892 GTATAGATTCACTCATTTGCTCAGTAT 57.296 33.333 0.00 0.00 0.00 2.12
614 1929 6.413052 AGATTCACTCATTTGCTCAGTATGT 58.587 36.000 0.00 0.00 37.40 2.29
615 1930 7.559486 AGATTCACTCATTTGCTCAGTATGTA 58.441 34.615 0.00 0.00 37.40 2.29
616 1931 6.968131 TTCACTCATTTGCTCAGTATGTAC 57.032 37.500 0.00 0.00 37.40 2.90
617 1932 6.286240 TCACTCATTTGCTCAGTATGTACT 57.714 37.500 0.00 0.00 37.40 2.73
618 1933 6.333416 TCACTCATTTGCTCAGTATGTACTC 58.667 40.000 0.00 0.00 37.40 2.59
619 1934 5.521735 CACTCATTTGCTCAGTATGTACTCC 59.478 44.000 0.00 0.00 37.40 3.85
620 1935 5.023533 TCATTTGCTCAGTATGTACTCCC 57.976 43.478 0.00 0.00 37.40 4.30
621 1936 4.716784 TCATTTGCTCAGTATGTACTCCCT 59.283 41.667 0.00 0.00 37.40 4.20
622 1937 4.737855 TTTGCTCAGTATGTACTCCCTC 57.262 45.455 0.00 0.00 37.40 4.30
623 1938 2.667470 TGCTCAGTATGTACTCCCTCC 58.333 52.381 0.00 0.00 37.40 4.30
624 1939 1.609555 GCTCAGTATGTACTCCCTCCG 59.390 57.143 0.00 0.00 37.40 4.63
625 1940 2.933573 CTCAGTATGTACTCCCTCCGT 58.066 52.381 0.00 0.00 37.40 4.69
626 1941 3.288964 CTCAGTATGTACTCCCTCCGTT 58.711 50.000 0.00 0.00 37.40 4.44
627 1942 3.285484 TCAGTATGTACTCCCTCCGTTC 58.715 50.000 0.00 0.00 37.40 3.95
628 1943 2.033049 CAGTATGTACTCCCTCCGTTCG 59.967 54.545 0.00 0.00 33.46 3.95
629 1944 2.092753 AGTATGTACTCCCTCCGTTCGA 60.093 50.000 0.00 0.00 0.00 3.71
630 1945 1.843368 ATGTACTCCCTCCGTTCGAA 58.157 50.000 0.00 0.00 0.00 3.71
631 1946 1.619654 TGTACTCCCTCCGTTCGAAA 58.380 50.000 0.00 0.00 0.00 3.46
632 1947 2.173519 TGTACTCCCTCCGTTCGAAAT 58.826 47.619 0.00 0.00 0.00 2.17
633 1948 2.564062 TGTACTCCCTCCGTTCGAAATT 59.436 45.455 0.00 0.00 0.00 1.82
634 1949 3.763360 TGTACTCCCTCCGTTCGAAATTA 59.237 43.478 0.00 0.00 0.00 1.40
635 1950 3.242549 ACTCCCTCCGTTCGAAATTAC 57.757 47.619 0.00 0.00 0.00 1.89
636 1951 2.830321 ACTCCCTCCGTTCGAAATTACT 59.170 45.455 0.00 0.00 0.00 2.24
637 1952 3.260128 ACTCCCTCCGTTCGAAATTACTT 59.740 43.478 0.00 0.00 0.00 2.24
638 1953 3.592059 TCCCTCCGTTCGAAATTACTTG 58.408 45.455 0.00 0.00 0.00 3.16
639 1954 3.007182 TCCCTCCGTTCGAAATTACTTGT 59.993 43.478 0.00 0.00 0.00 3.16
640 1955 3.370061 CCCTCCGTTCGAAATTACTTGTC 59.630 47.826 0.00 0.00 0.00 3.18
641 1956 3.060363 CCTCCGTTCGAAATTACTTGTCG 59.940 47.826 0.00 0.00 36.12 4.35
642 1957 2.409378 TCCGTTCGAAATTACTTGTCGC 59.591 45.455 0.00 0.00 34.80 5.19
643 1958 2.405736 CGTTCGAAATTACTTGTCGCG 58.594 47.619 0.00 0.00 34.80 5.87
644 1959 2.754478 GTTCGAAATTACTTGTCGCGG 58.246 47.619 6.13 0.00 34.80 6.46
645 1960 2.350899 TCGAAATTACTTGTCGCGGA 57.649 45.000 6.13 0.00 34.80 5.54
646 1961 2.674954 TCGAAATTACTTGTCGCGGAA 58.325 42.857 6.13 0.00 34.80 4.30
647 1962 3.058450 TCGAAATTACTTGTCGCGGAAA 58.942 40.909 6.13 0.00 34.80 3.13
648 1963 3.680937 TCGAAATTACTTGTCGCGGAAAT 59.319 39.130 6.13 0.00 34.80 2.17
649 1964 4.152759 TCGAAATTACTTGTCGCGGAAATT 59.847 37.500 6.13 1.09 34.80 1.82
650 1965 4.259734 CGAAATTACTTGTCGCGGAAATTG 59.740 41.667 6.13 0.00 0.00 2.32
651 1966 3.757745 ATTACTTGTCGCGGAAATTGG 57.242 42.857 6.13 0.00 0.00 3.16
652 1967 2.459060 TACTTGTCGCGGAAATTGGA 57.541 45.000 6.13 0.00 0.00 3.53
653 1968 1.821216 ACTTGTCGCGGAAATTGGAT 58.179 45.000 6.13 0.00 0.00 3.41
654 1969 2.980568 ACTTGTCGCGGAAATTGGATA 58.019 42.857 6.13 0.00 0.00 2.59
655 1970 3.541632 ACTTGTCGCGGAAATTGGATAT 58.458 40.909 6.13 0.00 0.00 1.63
656 1971 4.699637 ACTTGTCGCGGAAATTGGATATA 58.300 39.130 6.13 0.00 0.00 0.86
657 1972 5.305585 ACTTGTCGCGGAAATTGGATATAT 58.694 37.500 6.13 0.00 0.00 0.86
658 1973 5.408604 ACTTGTCGCGGAAATTGGATATATC 59.591 40.000 6.13 3.96 0.00 1.63
659 1974 5.147330 TGTCGCGGAAATTGGATATATCT 57.853 39.130 6.13 0.00 0.00 1.98
660 1975 6.275494 TGTCGCGGAAATTGGATATATCTA 57.725 37.500 6.13 3.53 0.00 1.98
661 1976 6.693466 TGTCGCGGAAATTGGATATATCTAA 58.307 36.000 13.23 13.23 0.00 2.10
662 1977 7.156000 TGTCGCGGAAATTGGATATATCTAAA 58.844 34.615 14.63 9.15 30.96 1.85
663 1978 7.117236 TGTCGCGGAAATTGGATATATCTAAAC 59.883 37.037 14.63 7.18 30.96 2.01
664 1979 6.309494 TCGCGGAAATTGGATATATCTAAACG 59.691 38.462 14.63 15.83 30.96 3.60
665 1980 6.090358 CGCGGAAATTGGATATATCTAAACGT 59.910 38.462 14.63 4.27 30.96 3.99
666 1981 7.274033 CGCGGAAATTGGATATATCTAAACGTA 59.726 37.037 14.63 0.00 30.96 3.57
667 1982 9.095065 GCGGAAATTGGATATATCTAAACGTAT 57.905 33.333 14.63 0.00 30.96 3.06
696 2011 8.693120 AGTTCTAGATACATCCATTTACGAGA 57.307 34.615 0.00 0.00 0.00 4.04
697 2012 8.569641 AGTTCTAGATACATCCATTTACGAGAC 58.430 37.037 0.00 0.00 0.00 3.36
698 2013 8.350722 GTTCTAGATACATCCATTTACGAGACA 58.649 37.037 0.00 0.00 0.00 3.41
699 2014 8.459911 TCTAGATACATCCATTTACGAGACAA 57.540 34.615 0.00 0.00 0.00 3.18
700 2015 9.078990 TCTAGATACATCCATTTACGAGACAAT 57.921 33.333 0.00 0.00 0.00 2.71
701 2016 9.698309 CTAGATACATCCATTTACGAGACAATT 57.302 33.333 0.00 0.00 0.00 2.32
707 2022 8.621286 ACATCCATTTACGAGACAATTAATTCC 58.379 33.333 0.00 0.00 0.00 3.01
708 2023 8.620416 CATCCATTTACGAGACAATTAATTCCA 58.380 33.333 0.00 0.00 0.00 3.53
709 2024 8.568676 TCCATTTACGAGACAATTAATTCCAA 57.431 30.769 0.00 0.00 0.00 3.53
710 2025 9.184523 TCCATTTACGAGACAATTAATTCCAAT 57.815 29.630 0.00 0.00 0.00 3.16
711 2026 9.450807 CCATTTACGAGACAATTAATTCCAATC 57.549 33.333 0.00 0.00 0.00 2.67
712 2027 9.158364 CATTTACGAGACAATTAATTCCAATCG 57.842 33.333 14.96 14.96 0.00 3.34
713 2028 5.734855 ACGAGACAATTAATTCCAATCGG 57.265 39.130 18.30 3.40 32.27 4.18
714 2029 5.424757 ACGAGACAATTAATTCCAATCGGA 58.575 37.500 18.30 0.00 40.60 4.55
715 2030 5.523916 ACGAGACAATTAATTCCAATCGGAG 59.476 40.000 18.30 2.30 44.10 4.63
716 2031 5.050091 CGAGACAATTAATTCCAATCGGAGG 60.050 44.000 0.00 0.00 44.10 4.30
717 2032 5.133221 AGACAATTAATTCCAATCGGAGGG 58.867 41.667 0.00 0.00 44.10 4.30
718 2033 5.104109 AGACAATTAATTCCAATCGGAGGGA 60.104 40.000 0.00 0.00 44.10 4.20
719 2034 5.133221 ACAATTAATTCCAATCGGAGGGAG 58.867 41.667 0.00 0.00 44.10 4.30
801 2413 9.482627 CTTTATAGAGATTTCACTATGGACCAC 57.517 37.037 0.00 0.00 33.08 4.16
805 2417 7.623999 AGAGATTTCACTATGGACCACATAT 57.376 36.000 0.00 0.00 41.07 1.78
806 2418 7.448420 AGAGATTTCACTATGGACCACATATG 58.552 38.462 0.00 0.00 41.07 1.78
1009 2628 0.105555 AGCCAGAGAGATGGAGAGGG 60.106 60.000 0.00 0.00 43.57 4.30
1024 2643 2.262774 GAGGGTGGTGATGAGGCTGG 62.263 65.000 0.00 0.00 0.00 4.85
1154 2776 4.405671 GCAGCAGCAGCAGGAGGA 62.406 66.667 4.63 0.00 45.49 3.71
1158 2786 2.046507 CAGCAGCAGGAGGACCAC 60.047 66.667 0.00 0.00 38.94 4.16
1164 2792 4.715130 CAGGAGGACCACCCCGGA 62.715 72.222 0.73 0.00 38.63 5.14
1206 2834 3.419759 GCCCACGTGCGTTACCTG 61.420 66.667 10.91 0.00 0.00 4.00
1229 2857 0.253044 CCCGCTTCCATCTTCTTCCA 59.747 55.000 0.00 0.00 0.00 3.53
1235 2863 5.453339 CCGCTTCCATCTTCTTCCACTAATA 60.453 44.000 0.00 0.00 0.00 0.98
1239 2867 8.563732 GCTTCCATCTTCTTCCACTAATAAATC 58.436 37.037 0.00 0.00 0.00 2.17
1240 2868 8.662781 TTCCATCTTCTTCCACTAATAAATCG 57.337 34.615 0.00 0.00 0.00 3.34
1241 2869 8.018537 TCCATCTTCTTCCACTAATAAATCGA 57.981 34.615 0.00 0.00 0.00 3.59
1242 2870 7.926555 TCCATCTTCTTCCACTAATAAATCGAC 59.073 37.037 0.00 0.00 0.00 4.20
1275 2903 1.719529 CATCTGATGCTCCCTCCTCT 58.280 55.000 4.47 0.00 0.00 3.69
1400 3028 1.743252 CCAGCCTTCCTTCAGCGTC 60.743 63.158 0.00 0.00 0.00 5.19
1430 3058 8.451908 ACAGGTTAATTGCTCATTATTACCTC 57.548 34.615 8.53 0.00 36.81 3.85
1447 3075 9.982651 TTATTACCTCAATTAATCTCCTCTTCG 57.017 33.333 0.00 0.00 0.00 3.79
1467 3095 2.899153 GTGACAGTCACGCACATCA 58.101 52.632 17.96 0.00 37.67 3.07
1468 3096 1.217001 GTGACAGTCACGCACATCAA 58.783 50.000 17.96 0.00 37.67 2.57
1471 3099 2.480037 TGACAGTCACGCACATCAAATC 59.520 45.455 0.00 0.00 0.00 2.17
1472 3100 2.480037 GACAGTCACGCACATCAAATCA 59.520 45.455 0.00 0.00 0.00 2.57
1473 3101 2.877786 ACAGTCACGCACATCAAATCAA 59.122 40.909 0.00 0.00 0.00 2.57
1605 3400 3.412386 GTTGGTGGACAAGAACTAGCAT 58.588 45.455 0.00 0.00 40.38 3.79
1615 3410 5.352284 ACAAGAACTAGCATCTTATCCACG 58.648 41.667 10.19 2.12 35.43 4.94
1633 3428 3.190744 CCACGTTTGCTCTAGACTAGACA 59.809 47.826 8.17 8.92 0.00 3.41
1634 3429 4.407818 CACGTTTGCTCTAGACTAGACAG 58.592 47.826 8.17 1.51 0.00 3.51
1635 3430 4.073549 ACGTTTGCTCTAGACTAGACAGT 58.926 43.478 8.17 4.52 37.87 3.55
1636 3431 5.121925 CACGTTTGCTCTAGACTAGACAGTA 59.878 44.000 8.17 0.00 34.21 2.74
1637 3432 5.352016 ACGTTTGCTCTAGACTAGACAGTAG 59.648 44.000 8.17 0.10 34.21 2.57
1638 3433 5.581479 CGTTTGCTCTAGACTAGACAGTAGA 59.419 44.000 8.17 0.00 34.21 2.59
1639 3434 6.455913 CGTTTGCTCTAGACTAGACAGTAGAC 60.456 46.154 8.17 4.70 34.21 2.59
1640 3435 5.678955 TGCTCTAGACTAGACAGTAGACA 57.321 43.478 8.17 0.00 34.21 3.41
1641 3436 5.666462 TGCTCTAGACTAGACAGTAGACAG 58.334 45.833 8.17 0.00 34.21 3.51
1642 3437 4.510340 GCTCTAGACTAGACAGTAGACAGC 59.490 50.000 8.17 3.79 34.21 4.40
1643 3438 5.026038 TCTAGACTAGACAGTAGACAGCC 57.974 47.826 8.17 0.00 34.21 4.85
1644 3439 3.722908 AGACTAGACAGTAGACAGCCA 57.277 47.619 0.00 0.00 34.21 4.75
1705 3513 7.687941 ATATCGATGGTCATAATCAAAACCC 57.312 36.000 8.54 0.00 0.00 4.11
1739 3547 3.774528 TGCGTAGGCAGGCTCCAG 61.775 66.667 5.89 0.00 46.21 3.86
1812 3620 7.256399 TCATCCATCCCTACCTGAACTAATAT 58.744 38.462 0.00 0.00 0.00 1.28
1817 3625 3.576982 CCCTACCTGAACTAATATCGCCA 59.423 47.826 0.00 0.00 0.00 5.69
1959 3767 3.821600 TGTTCTGATCTAGATAGCGACCC 59.178 47.826 4.89 0.00 34.80 4.46
1960 3768 3.790089 TCTGATCTAGATAGCGACCCA 57.210 47.619 4.89 0.00 0.00 4.51
1964 3772 5.540337 TCTGATCTAGATAGCGACCCAAATT 59.460 40.000 4.89 0.00 0.00 1.82
1965 3773 6.042093 TCTGATCTAGATAGCGACCCAAATTT 59.958 38.462 4.89 0.00 0.00 1.82
2046 3854 1.983224 CGGGCTCCGGATCCATATT 59.017 57.895 25.14 0.00 44.15 1.28
2069 3877 3.340928 TCTTGTCTGCCTCATTGTGATG 58.659 45.455 0.00 0.00 34.46 3.07
2073 3881 3.208594 GTCTGCCTCATTGTGATGCATA 58.791 45.455 0.00 1.80 44.68 3.14
2106 3914 1.745141 CGCTGGGATCCAAGGAAAGAG 60.745 57.143 18.34 1.35 30.80 2.85
2137 3945 5.698545 ACAGATGCAGTTAGTCTTTTCTGTC 59.301 40.000 6.48 0.00 30.08 3.51
2138 3946 5.698089 CAGATGCAGTTAGTCTTTTCTGTCA 59.302 40.000 0.00 0.00 0.00 3.58
2139 3947 6.203530 CAGATGCAGTTAGTCTTTTCTGTCAA 59.796 38.462 0.00 0.00 0.00 3.18
2140 3948 6.939163 AGATGCAGTTAGTCTTTTCTGTCAAT 59.061 34.615 0.00 0.00 0.00 2.57
2141 3949 8.097038 AGATGCAGTTAGTCTTTTCTGTCAATA 58.903 33.333 0.00 0.00 0.00 1.90
2142 3950 7.421530 TGCAGTTAGTCTTTTCTGTCAATAC 57.578 36.000 0.00 0.00 0.00 1.89
2143 3951 6.989759 TGCAGTTAGTCTTTTCTGTCAATACA 59.010 34.615 0.00 0.00 0.00 2.29
2144 3952 7.661437 TGCAGTTAGTCTTTTCTGTCAATACAT 59.339 33.333 0.00 0.00 34.37 2.29
2145 3953 7.959651 GCAGTTAGTCTTTTCTGTCAATACATG 59.040 37.037 0.00 0.00 34.37 3.21
2177 3988 4.705507 TCATGAGTGACTAGTCCACCTTAC 59.294 45.833 20.11 10.21 35.23 2.34
2178 3989 3.428532 TGAGTGACTAGTCCACCTTACC 58.571 50.000 20.11 5.62 35.23 2.85
2186 3997 2.414612 AGTCCACCTTACCTTTGGTCA 58.585 47.619 0.00 0.00 37.09 4.02
2197 4008 8.442374 ACCTTACCTTTGGTCATTTAAGTCTTA 58.558 33.333 0.00 0.00 37.09 2.10
2198 4009 8.947115 CCTTACCTTTGGTCATTTAAGTCTTAG 58.053 37.037 0.00 0.00 37.09 2.18
2239 4055 4.142790 ACAATGCATTCTCCATCCAGATC 58.857 43.478 9.53 0.00 0.00 2.75
2240 4056 4.141228 ACAATGCATTCTCCATCCAGATCT 60.141 41.667 9.53 0.00 0.00 2.75
2241 4057 5.072736 ACAATGCATTCTCCATCCAGATCTA 59.927 40.000 9.53 0.00 0.00 1.98
2242 4058 4.613925 TGCATTCTCCATCCAGATCTAC 57.386 45.455 0.00 0.00 0.00 2.59
2243 4059 3.969312 TGCATTCTCCATCCAGATCTACA 59.031 43.478 0.00 0.00 0.00 2.74
2244 4060 4.409901 TGCATTCTCCATCCAGATCTACAA 59.590 41.667 0.00 0.00 0.00 2.41
2245 4061 4.996122 GCATTCTCCATCCAGATCTACAAG 59.004 45.833 0.00 0.00 0.00 3.16
2246 4062 4.679373 TTCTCCATCCAGATCTACAAGC 57.321 45.455 0.00 0.00 0.00 4.01
2247 4063 2.968574 TCTCCATCCAGATCTACAAGCC 59.031 50.000 0.00 0.00 0.00 4.35
2248 4064 2.702478 CTCCATCCAGATCTACAAGCCA 59.298 50.000 0.00 0.00 0.00 4.75
2249 4065 2.702478 TCCATCCAGATCTACAAGCCAG 59.298 50.000 0.00 0.00 0.00 4.85
2250 4066 2.437281 CCATCCAGATCTACAAGCCAGT 59.563 50.000 0.00 0.00 0.00 4.00
2251 4067 3.464907 CATCCAGATCTACAAGCCAGTG 58.535 50.000 0.00 0.00 0.00 3.66
2252 4068 2.540383 TCCAGATCTACAAGCCAGTGT 58.460 47.619 0.00 0.00 35.43 3.55
2253 4069 2.234661 TCCAGATCTACAAGCCAGTGTG 59.765 50.000 0.00 0.00 32.75 3.82
2254 4070 2.027745 CCAGATCTACAAGCCAGTGTGT 60.028 50.000 0.00 0.00 32.75 3.72
2255 4071 3.195610 CCAGATCTACAAGCCAGTGTGTA 59.804 47.826 0.00 0.00 32.75 2.90
2256 4072 4.141846 CCAGATCTACAAGCCAGTGTGTAT 60.142 45.833 0.00 0.00 32.75 2.29
2257 4073 5.069119 CCAGATCTACAAGCCAGTGTGTATA 59.931 44.000 0.00 0.00 32.75 1.47
2258 4074 5.980116 CAGATCTACAAGCCAGTGTGTATAC 59.020 44.000 0.00 0.00 32.75 1.47
2259 4075 5.656859 AGATCTACAAGCCAGTGTGTATACA 59.343 40.000 0.08 0.08 32.75 2.29
2260 4076 5.932619 TCTACAAGCCAGTGTGTATACAT 57.067 39.130 9.18 0.00 39.39 2.29
2261 4077 7.505923 AGATCTACAAGCCAGTGTGTATACATA 59.494 37.037 9.18 3.08 39.39 2.29
2262 4078 7.039313 TCTACAAGCCAGTGTGTATACATAG 57.961 40.000 9.18 2.99 39.39 2.23
2263 4079 5.932619 ACAAGCCAGTGTGTATACATAGA 57.067 39.130 9.18 0.00 39.39 1.98
2264 4080 5.661458 ACAAGCCAGTGTGTATACATAGAC 58.339 41.667 9.18 6.68 39.39 2.59
2265 4081 5.186992 ACAAGCCAGTGTGTATACATAGACA 59.813 40.000 9.18 0.00 39.39 3.41
2266 4082 5.521906 AGCCAGTGTGTATACATAGACAG 57.478 43.478 9.18 3.88 37.24 3.51
2267 4083 4.956700 AGCCAGTGTGTATACATAGACAGT 59.043 41.667 9.18 2.39 39.80 3.55
2274 4090 8.300286 AGTGTGTATACATAGACAGTGATATGC 58.700 37.037 9.18 0.00 38.36 3.14
2275 4091 8.082242 GTGTGTATACATAGACAGTGATATGCA 58.918 37.037 9.18 0.00 37.24 3.96
2285 4101 2.254546 GTGATATGCACGGGATCCAA 57.745 50.000 15.23 0.00 37.83 3.53
2286 4102 2.146342 GTGATATGCACGGGATCCAAG 58.854 52.381 15.23 9.56 37.83 3.61
2287 4103 1.072173 TGATATGCACGGGATCCAAGG 59.928 52.381 15.23 4.54 0.00 3.61
2288 4104 1.347707 GATATGCACGGGATCCAAGGA 59.652 52.381 15.23 3.91 0.00 3.36
2289 4105 1.208706 TATGCACGGGATCCAAGGAA 58.791 50.000 15.23 0.00 0.00 3.36
2290 4106 0.394352 ATGCACGGGATCCAAGGAAC 60.394 55.000 15.23 0.00 0.00 3.62
2291 4107 1.002624 GCACGGGATCCAAGGAACA 60.003 57.895 15.23 0.00 0.00 3.18
2292 4108 1.026718 GCACGGGATCCAAGGAACAG 61.027 60.000 15.23 0.00 0.00 3.16
2293 4109 0.613260 CACGGGATCCAAGGAACAGA 59.387 55.000 15.23 0.00 0.00 3.41
2294 4110 0.905357 ACGGGATCCAAGGAACAGAG 59.095 55.000 15.23 0.00 0.00 3.35
2295 4111 1.195115 CGGGATCCAAGGAACAGAGA 58.805 55.000 15.23 0.00 0.00 3.10
2296 4112 1.134670 CGGGATCCAAGGAACAGAGAC 60.135 57.143 15.23 0.00 0.00 3.36
2297 4113 1.909302 GGGATCCAAGGAACAGAGACA 59.091 52.381 15.23 0.00 0.00 3.41
2298 4114 2.093235 GGGATCCAAGGAACAGAGACAG 60.093 54.545 15.23 0.00 0.00 3.51
2299 4115 2.834549 GGATCCAAGGAACAGAGACAGA 59.165 50.000 6.95 0.00 0.00 3.41
2300 4116 3.454082 GGATCCAAGGAACAGAGACAGAT 59.546 47.826 6.95 0.00 0.00 2.90
2301 4117 3.969287 TCCAAGGAACAGAGACAGATG 57.031 47.619 0.00 0.00 0.00 2.90
2302 4118 2.027745 TCCAAGGAACAGAGACAGATGC 60.028 50.000 0.00 0.00 0.00 3.91
2303 4119 2.289882 CCAAGGAACAGAGACAGATGCA 60.290 50.000 0.00 0.00 0.00 3.96
2304 4120 3.001414 CAAGGAACAGAGACAGATGCAG 58.999 50.000 0.00 0.00 0.00 4.41
2305 4121 2.255406 AGGAACAGAGACAGATGCAGT 58.745 47.619 0.00 0.00 0.00 4.40
2306 4122 2.636893 AGGAACAGAGACAGATGCAGTT 59.363 45.455 0.00 0.00 0.00 3.16
2307 4123 3.834813 AGGAACAGAGACAGATGCAGTTA 59.165 43.478 0.00 0.00 0.00 2.24
2308 4124 4.081752 AGGAACAGAGACAGATGCAGTTAG 60.082 45.833 0.00 0.00 0.00 2.34
2309 4125 4.322349 GGAACAGAGACAGATGCAGTTAGT 60.322 45.833 0.00 0.00 0.00 2.24
2310 4126 4.448537 ACAGAGACAGATGCAGTTAGTC 57.551 45.455 0.00 0.00 0.00 2.59
2311 4127 4.085733 ACAGAGACAGATGCAGTTAGTCT 58.914 43.478 12.02 12.02 41.84 3.24
2312 4128 4.526262 ACAGAGACAGATGCAGTTAGTCTT 59.474 41.667 13.03 4.01 39.47 3.01
2313 4129 5.011533 ACAGAGACAGATGCAGTTAGTCTTT 59.988 40.000 13.03 6.87 39.47 2.52
2314 4130 5.931146 CAGAGACAGATGCAGTTAGTCTTTT 59.069 40.000 13.03 5.10 39.47 2.27
2315 4131 6.090628 CAGAGACAGATGCAGTTAGTCTTTTC 59.909 42.308 13.03 1.47 39.47 2.29
2316 4132 6.014669 AGAGACAGATGCAGTTAGTCTTTTCT 60.015 38.462 13.03 5.47 39.47 2.52
2317 4133 5.931146 AGACAGATGCAGTTAGTCTTTTCTG 59.069 40.000 7.75 6.58 36.21 3.02
2318 4134 5.615289 ACAGATGCAGTTAGTCTTTTCTGT 58.385 37.500 6.48 6.48 0.00 3.41
2319 4135 5.698545 ACAGATGCAGTTAGTCTTTTCTGTC 59.301 40.000 6.48 0.00 30.08 3.51
2320 4136 5.698089 CAGATGCAGTTAGTCTTTTCTGTCA 59.302 40.000 0.00 0.00 0.00 3.58
2321 4137 6.203530 CAGATGCAGTTAGTCTTTTCTGTCAA 59.796 38.462 0.00 0.00 0.00 3.18
2322 4138 6.939163 AGATGCAGTTAGTCTTTTCTGTCAAT 59.061 34.615 0.00 0.00 0.00 2.57
2323 4139 8.097038 AGATGCAGTTAGTCTTTTCTGTCAATA 58.903 33.333 0.00 0.00 0.00 1.90
2324 4140 7.421530 TGCAGTTAGTCTTTTCTGTCAATAC 57.578 36.000 0.00 0.00 0.00 1.89
2325 4141 6.989759 TGCAGTTAGTCTTTTCTGTCAATACA 59.010 34.615 0.00 0.00 0.00 2.29
2326 4142 7.661437 TGCAGTTAGTCTTTTCTGTCAATACAT 59.339 33.333 0.00 0.00 34.37 2.29
2327 4143 7.959651 GCAGTTAGTCTTTTCTGTCAATACATG 59.040 37.037 0.00 0.00 34.37 3.21
2328 4144 8.993121 CAGTTAGTCTTTTCTGTCAATACATGT 58.007 33.333 2.69 2.69 34.37 3.21
2338 4154 9.936759 TTTCTGTCAATACATGTATACAAGTCA 57.063 29.630 18.56 7.93 34.37 3.41
2340 4156 9.533253 TCTGTCAATACATGTATACAAGTCATG 57.467 33.333 18.56 15.58 42.86 3.07
2341 4157 9.533253 CTGTCAATACATGTATACAAGTCATGA 57.467 33.333 18.56 17.28 40.64 3.07
2342 4158 9.533253 TGTCAATACATGTATACAAGTCATGAG 57.467 33.333 18.56 5.23 40.64 2.90
2343 4159 9.534565 GTCAATACATGTATACAAGTCATGAGT 57.465 33.333 18.56 0.00 40.64 3.41
2344 4160 9.533253 TCAATACATGTATACAAGTCATGAGTG 57.467 33.333 18.56 9.34 40.64 3.51
2345 4161 9.533253 CAATACATGTATACAAGTCATGAGTGA 57.467 33.333 18.56 0.00 40.64 3.41
2356 4172 3.458044 TCATGAGTGACTAGTCCACCT 57.542 47.619 20.11 12.68 35.23 4.00
2357 4173 3.779444 TCATGAGTGACTAGTCCACCTT 58.221 45.455 20.11 4.11 35.23 3.50
2358 4174 4.930696 TCATGAGTGACTAGTCCACCTTA 58.069 43.478 20.11 10.17 35.23 2.69
2359 4175 5.519808 TCATGAGTGACTAGTCCACCTTAT 58.480 41.667 20.11 11.82 35.23 1.73
2360 4176 6.669631 TCATGAGTGACTAGTCCACCTTATA 58.330 40.000 20.11 0.00 35.23 0.98
2361 4177 7.298374 TCATGAGTGACTAGTCCACCTTATAT 58.702 38.462 20.11 6.99 35.23 0.86
2362 4178 7.785028 TCATGAGTGACTAGTCCACCTTATATT 59.215 37.037 20.11 0.00 35.23 1.28
2363 4179 7.973048 TGAGTGACTAGTCCACCTTATATTT 57.027 36.000 20.11 0.93 35.23 1.40
2364 4180 8.375493 TGAGTGACTAGTCCACCTTATATTTT 57.625 34.615 20.11 0.30 35.23 1.82
2365 4181 8.258007 TGAGTGACTAGTCCACCTTATATTTTG 58.742 37.037 20.11 0.00 35.23 2.44
2366 4182 7.565680 AGTGACTAGTCCACCTTATATTTTGG 58.434 38.462 20.11 0.00 35.23 3.28
2367 4183 7.182206 AGTGACTAGTCCACCTTATATTTTGGT 59.818 37.037 20.11 0.00 35.23 3.67
2368 4184 7.494952 GTGACTAGTCCACCTTATATTTTGGTC 59.505 40.741 20.11 0.00 30.72 4.02
2369 4185 7.402071 TGACTAGTCCACCTTATATTTTGGTCT 59.598 37.037 20.11 0.00 33.03 3.85
2370 4186 8.159229 ACTAGTCCACCTTATATTTTGGTCTT 57.841 34.615 0.00 0.00 31.22 3.01
2371 4187 8.612145 ACTAGTCCACCTTATATTTTGGTCTTT 58.388 33.333 0.00 0.00 31.22 2.52
2372 4188 7.703058 AGTCCACCTTATATTTTGGTCTTTG 57.297 36.000 0.00 0.00 30.72 2.77
2373 4189 7.466804 AGTCCACCTTATATTTTGGTCTTTGA 58.533 34.615 0.00 0.00 30.72 2.69
2374 4190 7.947890 AGTCCACCTTATATTTTGGTCTTTGAA 59.052 33.333 0.00 0.00 30.72 2.69
2375 4191 8.244113 GTCCACCTTATATTTTGGTCTTTGAAG 58.756 37.037 0.00 0.00 30.72 3.02
2376 4192 7.947890 TCCACCTTATATTTTGGTCTTTGAAGT 59.052 33.333 0.00 0.00 30.72 3.01
2377 4193 8.244113 CCACCTTATATTTTGGTCTTTGAAGTC 58.756 37.037 0.00 0.00 30.72 3.01
2378 4194 9.014297 CACCTTATATTTTGGTCTTTGAAGTCT 57.986 33.333 0.00 0.00 30.72 3.24
2379 4195 9.588096 ACCTTATATTTTGGTCTTTGAAGTCTT 57.412 29.630 0.00 0.00 0.00 3.01
2380 4196 9.846248 CCTTATATTTTGGTCTTTGAAGTCTTG 57.154 33.333 0.00 0.00 0.00 3.02
2381 4197 9.346725 CTTATATTTTGGTCTTTGAAGTCTTGC 57.653 33.333 0.00 0.00 0.00 4.01
2382 4198 5.859205 ATTTTGGTCTTTGAAGTCTTGCT 57.141 34.783 0.00 0.00 0.00 3.91
2383 4199 6.959639 ATTTTGGTCTTTGAAGTCTTGCTA 57.040 33.333 0.00 0.00 0.00 3.49
2384 4200 5.751243 TTTGGTCTTTGAAGTCTTGCTAC 57.249 39.130 0.00 0.00 0.00 3.58
2385 4201 4.689612 TGGTCTTTGAAGTCTTGCTACT 57.310 40.909 0.00 0.00 0.00 2.57
2386 4202 5.036117 TGGTCTTTGAAGTCTTGCTACTT 57.964 39.130 0.00 0.20 42.36 2.24
2387 4203 5.437060 TGGTCTTTGAAGTCTTGCTACTTT 58.563 37.500 0.00 0.00 39.78 2.66
2388 4204 5.296780 TGGTCTTTGAAGTCTTGCTACTTTG 59.703 40.000 0.00 0.00 39.78 2.77
2389 4205 5.208503 GTCTTTGAAGTCTTGCTACTTTGC 58.791 41.667 0.00 0.00 39.78 3.68
2390 4206 4.881273 TCTTTGAAGTCTTGCTACTTTGCA 59.119 37.500 0.00 0.00 39.78 4.08
2391 4207 4.818534 TTGAAGTCTTGCTACTTTGCAG 57.181 40.909 0.00 0.00 44.27 4.41
2392 4208 3.808728 TGAAGTCTTGCTACTTTGCAGT 58.191 40.909 0.00 0.00 44.27 4.40
2393 4209 4.199310 TGAAGTCTTGCTACTTTGCAGTT 58.801 39.130 0.00 0.00 44.27 3.16
2394 4210 4.640201 TGAAGTCTTGCTACTTTGCAGTTT 59.360 37.500 0.00 0.00 44.27 2.66
2395 4211 5.820423 TGAAGTCTTGCTACTTTGCAGTTTA 59.180 36.000 0.00 0.00 44.27 2.01
2396 4212 5.931441 AGTCTTGCTACTTTGCAGTTTAG 57.069 39.130 0.00 0.00 44.27 1.85
2397 4213 5.368989 AGTCTTGCTACTTTGCAGTTTAGT 58.631 37.500 0.00 0.00 44.27 2.24
2398 4214 6.522054 AGTCTTGCTACTTTGCAGTTTAGTA 58.478 36.000 0.00 0.00 44.27 1.82
2399 4215 6.424207 AGTCTTGCTACTTTGCAGTTTAGTAC 59.576 38.462 0.00 0.00 44.27 2.73
2400 4216 6.424207 GTCTTGCTACTTTGCAGTTTAGTACT 59.576 38.462 0.00 0.00 44.27 2.73
2401 4217 7.597743 GTCTTGCTACTTTGCAGTTTAGTACTA 59.402 37.037 0.00 0.00 44.27 1.82
2402 4218 7.813148 TCTTGCTACTTTGCAGTTTAGTACTAG 59.187 37.037 2.23 0.00 44.27 2.57
2403 4219 6.989659 TGCTACTTTGCAGTTTAGTACTAGT 58.010 36.000 0.00 0.00 38.12 2.57
2404 4220 8.114331 TGCTACTTTGCAGTTTAGTACTAGTA 57.886 34.615 2.23 0.00 38.12 1.82
2405 4221 8.025445 TGCTACTTTGCAGTTTAGTACTAGTAC 58.975 37.037 23.03 23.03 38.12 2.73
2406 4222 8.025445 GCTACTTTGCAGTTTAGTACTAGTACA 58.975 37.037 29.87 15.95 35.11 2.90
2407 4223 9.903682 CTACTTTGCAGTTTAGTACTAGTACAA 57.096 33.333 29.87 19.95 35.11 2.41
2421 4237 9.656323 AGTACTAGTACAATAATTCTCCATCCA 57.344 33.333 29.87 0.00 38.48 3.41
2422 4238 9.915629 GTACTAGTACAATAATTCTCCATCCAG 57.084 37.037 25.02 0.00 36.15 3.86
2423 4239 8.783660 ACTAGTACAATAATTCTCCATCCAGA 57.216 34.615 0.00 0.00 0.00 3.86
2424 4240 9.386122 ACTAGTACAATAATTCTCCATCCAGAT 57.614 33.333 0.00 0.00 0.00 2.90
2447 4263 2.269940 ACAAGCTAGTGTGGAAGGGAT 58.730 47.619 0.00 0.00 0.00 3.85
2460 4276 5.306419 TGTGGAAGGGATCTGATCTCTATTG 59.694 44.000 19.89 0.00 39.80 1.90
2461 4277 5.306678 GTGGAAGGGATCTGATCTCTATTGT 59.693 44.000 19.89 4.84 39.80 2.71
2462 4278 5.907662 TGGAAGGGATCTGATCTCTATTGTT 59.092 40.000 19.89 4.45 39.80 2.83
2463 4279 7.015682 GTGGAAGGGATCTGATCTCTATTGTTA 59.984 40.741 19.89 2.33 39.80 2.41
2464 4280 7.736691 TGGAAGGGATCTGATCTCTATTGTTAT 59.263 37.037 19.89 2.98 39.80 1.89
2465 4281 8.040132 GGAAGGGATCTGATCTCTATTGTTATG 58.960 40.741 19.89 0.00 39.80 1.90
2466 4282 8.503428 AAGGGATCTGATCTCTATTGTTATGT 57.497 34.615 19.89 0.00 39.80 2.29
2467 4283 8.503428 AGGGATCTGATCTCTATTGTTATGTT 57.497 34.615 18.29 0.00 38.65 2.71
2468 4284 8.592809 AGGGATCTGATCTCTATTGTTATGTTC 58.407 37.037 18.29 0.00 38.65 3.18
2469 4285 7.821846 GGGATCTGATCTCTATTGTTATGTTCC 59.178 40.741 16.61 0.97 0.00 3.62
2470 4286 8.370940 GGATCTGATCTCTATTGTTATGTTCCA 58.629 37.037 16.61 0.00 0.00 3.53
2471 4287 9.202273 GATCTGATCTCTATTGTTATGTTCCAC 57.798 37.037 10.37 0.00 0.00 4.02
2472 4288 8.311395 TCTGATCTCTATTGTTATGTTCCACT 57.689 34.615 0.00 0.00 0.00 4.00
2473 4289 9.421399 TCTGATCTCTATTGTTATGTTCCACTA 57.579 33.333 0.00 0.00 0.00 2.74
2501 4317 0.250513 CCTAGTGGAGCTGACAACCC 59.749 60.000 0.00 0.00 34.57 4.11
2502 4318 0.250513 CTAGTGGAGCTGACAACCCC 59.749 60.000 0.00 0.00 0.00 4.95
2503 4319 0.472925 TAGTGGAGCTGACAACCCCA 60.473 55.000 0.00 0.00 0.00 4.96
2508 4324 0.179018 GAGCTGACAACCCCACTTGT 60.179 55.000 0.00 0.00 37.06 3.16
2523 4378 6.070481 ACCCCACTTGTTTGATTTAACTGTTT 60.070 34.615 0.00 0.00 0.00 2.83
2542 4397 4.581409 TGTTTACAAACCTGAAGGCTTACC 59.419 41.667 0.00 0.00 38.11 2.85
2543 4398 4.825634 GTTTACAAACCTGAAGGCTTACCT 59.174 41.667 0.00 0.00 39.54 3.08
2597 4460 4.570369 ACAGCCAAAACAAGCATGTAAAAC 59.430 37.500 0.00 0.00 39.40 2.43
2620 4483 8.742554 AACGAAATAAGAAAATAACAAGCCTG 57.257 30.769 0.00 0.00 0.00 4.85
2737 4600 3.493877 CAGCAATCTCCATGATCGAAGAC 59.506 47.826 0.00 0.00 42.51 3.01
2778 4641 2.046892 CCCAGGCAAGGTCAGTCG 60.047 66.667 0.00 0.00 0.00 4.18
2798 4661 4.502282 GTCGTCACTCATGCTTTCAGATAG 59.498 45.833 0.00 0.00 0.00 2.08
2801 4664 5.752472 CGTCACTCATGCTTTCAGATAGATT 59.248 40.000 0.00 0.00 0.00 2.40
2826 4689 8.836268 TGACAACTGTATTCGGTAAAAAGTAT 57.164 30.769 0.00 0.00 32.25 2.12
2917 4780 6.726258 AAAAAGAAGGAAGCAACAACTTTG 57.274 33.333 0.00 0.00 0.00 2.77
2919 4782 5.859205 AAGAAGGAAGCAACAACTTTGAT 57.141 34.783 0.00 0.00 0.00 2.57
2921 4784 6.566197 AGAAGGAAGCAACAACTTTGATAG 57.434 37.500 0.00 0.00 0.00 2.08
2922 4785 6.299141 AGAAGGAAGCAACAACTTTGATAGA 58.701 36.000 0.00 0.00 0.00 1.98
2923 4786 6.944862 AGAAGGAAGCAACAACTTTGATAGAT 59.055 34.615 0.00 0.00 0.00 1.98
2925 4788 8.635765 AAGGAAGCAACAACTTTGATAGATAA 57.364 30.769 0.00 0.00 0.00 1.75
2961 4902 6.313744 AGTAAAAGAAAACCGGTCATTCAG 57.686 37.500 26.06 0.00 0.00 3.02
2980 4921 8.963725 TCATTCAGCATTGAGTTCTTATTTCAT 58.036 29.630 0.00 0.00 34.15 2.57
3008 4949 5.616488 AATGGCATTGAGATTGCAAAAAC 57.384 34.783 12.82 0.00 41.95 2.43
3009 4950 4.069300 TGGCATTGAGATTGCAAAAACA 57.931 36.364 1.71 0.64 41.95 2.83
3030 4972 3.063997 CACGAAACAATAGGAGGCATGTC 59.936 47.826 0.00 0.00 0.00 3.06
3043 4985 2.161855 GGCATGTCCTTCATTGTGTCA 58.838 47.619 0.00 0.00 34.09 3.58
3078 5020 7.336679 TGACAGAAATTCAGAGTTCTTGTTGAA 59.663 33.333 0.00 0.00 38.07 2.69
3117 5059 5.213891 TCTGCAAGAAATCAGTCACACTA 57.786 39.130 0.00 0.00 42.31 2.74
3119 5061 5.640783 TCTGCAAGAAATCAGTCACACTATG 59.359 40.000 0.00 0.00 42.31 2.23
3148 5090 6.000246 TGCATATGGATCTGAAACTAACCA 58.000 37.500 4.56 0.00 0.00 3.67
3149 5091 6.604171 TGCATATGGATCTGAAACTAACCAT 58.396 36.000 4.56 0.00 40.50 3.55
3185 5127 4.194720 ACGACGCTGATCGAGCCC 62.195 66.667 0.00 0.00 46.01 5.19
3446 5581 0.251209 TCCAGGTGCACTACGAGACT 60.251 55.000 17.98 0.00 0.00 3.24
3638 5775 3.785887 AGCCAGGTAGGATATTGGTTTCA 59.214 43.478 0.00 0.00 41.22 2.69
3650 5787 8.910944 AGGATATTGGTTTCAGAAAATGATCAG 58.089 33.333 0.09 0.00 37.89 2.90
3662 5799 7.605691 TCAGAAAATGATCAGACCTTCTTCTTC 59.394 37.037 0.09 0.00 31.12 2.87
3664 5801 7.823799 AGAAAATGATCAGACCTTCTTCTTCTC 59.176 37.037 0.09 0.00 0.00 2.87
3666 5803 6.872585 ATGATCAGACCTTCTTCTTCTCTT 57.127 37.500 0.09 0.00 0.00 2.85
3679 5816 9.165035 CTTCTTCTTCTCTTTTTCATGCTAGAT 57.835 33.333 0.00 0.00 0.00 1.98
3722 5870 4.009675 TGATCATGTTGCTAACTGAACCC 58.990 43.478 0.00 0.00 0.00 4.11
3783 5931 8.424133 GTTGGATTTAAGCCAGATATTTTGGAT 58.576 33.333 1.23 2.37 37.96 3.41
3814 5962 7.842887 ATAATGGAGAAGGTTCTAGAGGTAC 57.157 40.000 0.00 0.00 37.73 3.34
3895 6054 5.781210 TGCATGTAATTGACAGGTGAAAA 57.219 34.783 0.00 0.00 42.79 2.29
3956 6115 0.038310 GAGGGCCTGCTGGTAAGTTT 59.962 55.000 12.95 0.00 35.27 2.66
3989 6159 4.044698 ACTGCTCCCTAAGGAAAGGAAAAT 59.955 41.667 0.00 0.00 43.40 1.82
4012 6220 8.710749 AATAATGGTTATATTGGCTCATGTGT 57.289 30.769 0.00 0.00 0.00 3.72
4028 6236 6.169557 TCATGTGTAACTGAACTGGTTACT 57.830 37.500 14.80 0.00 45.19 2.24
4034 6243 7.390996 TGTGTAACTGAACTGGTTACTTCAAAA 59.609 33.333 14.80 0.00 45.19 2.44
4414 6643 5.683876 AGTGCTAGTCATACCTCATTTGT 57.316 39.130 0.00 0.00 0.00 2.83
4443 6677 5.694231 TCAGTTTGTTCATCATGTGGAAG 57.306 39.130 0.00 0.00 0.00 3.46
4461 6695 4.330620 TGGAAGTCGTGTAAACAACAGTTC 59.669 41.667 0.00 0.00 39.29 3.01
4499 6738 3.639561 GGACTTTACCTCTCTGGAGATCC 59.360 52.174 0.48 0.42 41.86 3.36
4866 7127 2.281484 TCGCTGCCGGCTTCTTTT 60.281 55.556 29.70 0.00 39.13 2.27
5181 7465 1.001974 CCAGAACTCGGTGGATGTTCA 59.998 52.381 0.00 0.00 41.56 3.18
5255 7543 5.104776 TGAAAGCATTCATACTCAGGCTAGT 60.105 40.000 0.00 0.00 40.59 2.57
5318 7608 4.571984 GGCAATTTCATTGATACAAAGGGC 59.428 41.667 0.49 0.00 42.83 5.19
5322 7615 3.080300 TCATTGATACAAAGGGCGGTT 57.920 42.857 0.00 0.00 0.00 4.44
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 1.293267 AAACCACGGTCCAATACGCG 61.293 55.000 3.53 3.53 0.00 6.01
36 37 3.793775 TTCGCGCGGACAGAAACCA 62.794 57.895 31.69 2.53 0.00 3.67
38 39 1.058903 GATTCGCGCGGACAGAAAC 59.941 57.895 31.69 11.37 0.00 2.78
44 45 1.297598 CATTTGGATTCGCGCGGAC 60.298 57.895 31.69 20.14 0.00 4.79
48 49 1.463650 GCGTTCATTTGGATTCGCGC 61.464 55.000 0.00 0.00 38.61 6.86
53 54 1.472480 CCTTCCGCGTTCATTTGGATT 59.528 47.619 4.92 0.00 0.00 3.01
55 56 0.035598 TCCTTCCGCGTTCATTTGGA 59.964 50.000 4.92 0.00 0.00 3.53
249 1501 0.324943 ACCACCCTGACATGTACTGC 59.675 55.000 0.00 0.00 0.00 4.40
250 1502 2.224523 ACAACCACCCTGACATGTACTG 60.225 50.000 0.00 0.00 0.00 2.74
251 1503 2.054799 ACAACCACCCTGACATGTACT 58.945 47.619 0.00 0.00 0.00 2.73
299 1557 1.801309 GCACGAGGCTAGCTAGGAGG 61.801 65.000 22.10 0.00 40.25 4.30
408 1680 3.574396 GAGGGACCTTTTCTTTTTGGGAG 59.426 47.826 0.00 0.00 0.00 4.30
466 1739 0.249489 AAGGAAGATCCGCGATTCCG 60.249 55.000 8.23 0.00 45.84 4.30
467 1740 1.503294 GAAGGAAGATCCGCGATTCC 58.497 55.000 8.23 15.39 42.75 3.01
468 1741 1.503294 GGAAGGAAGATCCGCGATTC 58.497 55.000 8.23 3.50 42.75 2.52
469 1742 0.106894 GGGAAGGAAGATCCGCGATT 59.893 55.000 8.23 0.00 42.75 3.34
470 1743 0.760945 AGGGAAGGAAGATCCGCGAT 60.761 55.000 8.23 0.00 42.75 4.58
471 1744 1.381327 AGGGAAGGAAGATCCGCGA 60.381 57.895 8.23 0.00 42.75 5.87
472 1745 1.068250 GAGGGAAGGAAGATCCGCG 59.932 63.158 0.00 0.00 42.75 6.46
473 1746 1.448069 GGAGGGAAGGAAGATCCGC 59.552 63.158 0.00 0.00 42.75 5.54
509 1782 2.512515 GGCGGCTTGTAGCAGAGG 60.513 66.667 0.00 0.00 44.75 3.69
604 1919 1.609555 CGGAGGGAGTACATACTGAGC 59.390 57.143 0.00 0.00 36.50 4.26
605 1920 2.933573 ACGGAGGGAGTACATACTGAG 58.066 52.381 0.00 0.00 36.50 3.35
606 1921 3.285484 GAACGGAGGGAGTACATACTGA 58.715 50.000 0.00 0.00 36.50 3.41
607 1922 2.033049 CGAACGGAGGGAGTACATACTG 59.967 54.545 0.00 0.00 36.50 2.74
608 1923 2.092753 TCGAACGGAGGGAGTACATACT 60.093 50.000 0.00 0.00 39.71 2.12
609 1924 2.292267 TCGAACGGAGGGAGTACATAC 58.708 52.381 0.00 0.00 0.00 2.39
610 1925 2.715749 TCGAACGGAGGGAGTACATA 57.284 50.000 0.00 0.00 0.00 2.29
611 1926 1.843368 TTCGAACGGAGGGAGTACAT 58.157 50.000 0.00 0.00 0.00 2.29
612 1927 1.619654 TTTCGAACGGAGGGAGTACA 58.380 50.000 0.00 0.00 0.00 2.90
614 1929 4.019174 AGTAATTTCGAACGGAGGGAGTA 58.981 43.478 0.00 0.00 0.00 2.59
615 1930 2.830321 AGTAATTTCGAACGGAGGGAGT 59.170 45.455 0.00 0.00 0.00 3.85
616 1931 3.521947 AGTAATTTCGAACGGAGGGAG 57.478 47.619 0.00 0.00 0.00 4.30
617 1932 3.007182 ACAAGTAATTTCGAACGGAGGGA 59.993 43.478 0.00 0.00 0.00 4.20
618 1933 3.332034 ACAAGTAATTTCGAACGGAGGG 58.668 45.455 0.00 0.00 0.00 4.30
619 1934 3.060363 CGACAAGTAATTTCGAACGGAGG 59.940 47.826 0.00 0.00 34.62 4.30
620 1935 3.481467 GCGACAAGTAATTTCGAACGGAG 60.481 47.826 0.00 0.00 34.62 4.63
621 1936 2.409378 GCGACAAGTAATTTCGAACGGA 59.591 45.455 0.00 0.00 34.62 4.69
622 1937 2.754478 GCGACAAGTAATTTCGAACGG 58.246 47.619 0.00 0.00 34.62 4.44
623 1938 2.405736 CGCGACAAGTAATTTCGAACG 58.594 47.619 0.00 0.00 34.62 3.95
624 1939 2.409378 TCCGCGACAAGTAATTTCGAAC 59.591 45.455 8.23 0.00 34.62 3.95
625 1940 2.674954 TCCGCGACAAGTAATTTCGAA 58.325 42.857 8.23 0.00 34.62 3.71
626 1941 2.350899 TCCGCGACAAGTAATTTCGA 57.649 45.000 8.23 0.00 34.62 3.71
627 1942 3.443054 TTTCCGCGACAAGTAATTTCG 57.557 42.857 8.23 4.05 35.82 3.46
628 1943 4.557301 CCAATTTCCGCGACAAGTAATTTC 59.443 41.667 8.23 0.00 0.00 2.17
629 1944 4.216687 TCCAATTTCCGCGACAAGTAATTT 59.783 37.500 8.23 0.00 0.00 1.82
630 1945 3.754323 TCCAATTTCCGCGACAAGTAATT 59.246 39.130 8.23 0.00 0.00 1.40
631 1946 3.340034 TCCAATTTCCGCGACAAGTAAT 58.660 40.909 8.23 0.00 0.00 1.89
632 1947 2.768698 TCCAATTTCCGCGACAAGTAA 58.231 42.857 8.23 0.00 0.00 2.24
633 1948 2.459060 TCCAATTTCCGCGACAAGTA 57.541 45.000 8.23 0.00 0.00 2.24
634 1949 1.821216 ATCCAATTTCCGCGACAAGT 58.179 45.000 8.23 0.00 0.00 3.16
635 1950 5.639506 AGATATATCCAATTTCCGCGACAAG 59.360 40.000 8.23 0.00 0.00 3.16
636 1951 5.547465 AGATATATCCAATTTCCGCGACAA 58.453 37.500 8.23 0.00 0.00 3.18
637 1952 5.147330 AGATATATCCAATTTCCGCGACA 57.853 39.130 8.23 0.00 0.00 4.35
638 1953 7.453838 GTTTAGATATATCCAATTTCCGCGAC 58.546 38.462 8.23 0.00 0.00 5.19
639 1954 6.309494 CGTTTAGATATATCCAATTTCCGCGA 59.691 38.462 8.23 0.00 0.00 5.87
640 1955 6.090358 ACGTTTAGATATATCCAATTTCCGCG 59.910 38.462 9.18 0.00 0.00 6.46
641 1956 7.360575 ACGTTTAGATATATCCAATTTCCGC 57.639 36.000 9.18 0.00 0.00 5.54
670 1985 9.788889 TCTCGTAAATGGATGTATCTAGAACTA 57.211 33.333 0.00 0.00 0.00 2.24
671 1986 8.569641 GTCTCGTAAATGGATGTATCTAGAACT 58.430 37.037 0.00 0.00 0.00 3.01
672 1987 8.350722 TGTCTCGTAAATGGATGTATCTAGAAC 58.649 37.037 0.00 0.00 0.00 3.01
673 1988 8.459911 TGTCTCGTAAATGGATGTATCTAGAA 57.540 34.615 0.00 0.00 0.00 2.10
674 1989 8.459911 TTGTCTCGTAAATGGATGTATCTAGA 57.540 34.615 0.00 0.00 0.00 2.43
675 1990 9.698309 AATTGTCTCGTAAATGGATGTATCTAG 57.302 33.333 0.00 0.00 0.00 2.43
681 1996 8.621286 GGAATTAATTGTCTCGTAAATGGATGT 58.379 33.333 5.17 0.00 0.00 3.06
682 1997 8.620416 TGGAATTAATTGTCTCGTAAATGGATG 58.380 33.333 5.17 0.00 0.00 3.51
683 1998 8.746052 TGGAATTAATTGTCTCGTAAATGGAT 57.254 30.769 5.17 0.00 0.00 3.41
684 1999 8.568676 TTGGAATTAATTGTCTCGTAAATGGA 57.431 30.769 5.17 0.00 0.00 3.41
685 2000 9.450807 GATTGGAATTAATTGTCTCGTAAATGG 57.549 33.333 5.17 0.00 0.00 3.16
686 2001 9.158364 CGATTGGAATTAATTGTCTCGTAAATG 57.842 33.333 5.17 0.00 0.00 2.32
687 2002 8.342634 CCGATTGGAATTAATTGTCTCGTAAAT 58.657 33.333 5.17 0.00 37.49 1.40
688 2003 7.549842 TCCGATTGGAATTAATTGTCTCGTAAA 59.450 33.333 5.17 0.00 42.85 2.01
689 2004 7.042950 TCCGATTGGAATTAATTGTCTCGTAA 58.957 34.615 5.17 0.00 42.85 3.18
690 2005 6.575267 TCCGATTGGAATTAATTGTCTCGTA 58.425 36.000 5.17 0.00 42.85 3.43
691 2006 5.424757 TCCGATTGGAATTAATTGTCTCGT 58.575 37.500 5.17 0.00 42.85 4.18
692 2007 5.050091 CCTCCGATTGGAATTAATTGTCTCG 60.050 44.000 5.17 8.38 45.87 4.04
693 2008 5.239525 CCCTCCGATTGGAATTAATTGTCTC 59.760 44.000 5.17 0.00 45.87 3.36
694 2009 5.104109 TCCCTCCGATTGGAATTAATTGTCT 60.104 40.000 5.17 0.00 45.87 3.41
695 2010 5.130350 TCCCTCCGATTGGAATTAATTGTC 58.870 41.667 5.17 0.00 45.87 3.18
696 2011 5.124036 TCCCTCCGATTGGAATTAATTGT 57.876 39.130 5.17 0.00 45.87 2.71
697 2012 5.133221 ACTCCCTCCGATTGGAATTAATTG 58.867 41.667 5.17 0.00 45.87 2.32
698 2013 5.388599 ACTCCCTCCGATTGGAATTAATT 57.611 39.130 2.51 0.00 45.87 1.40
699 2014 5.607171 ACTACTCCCTCCGATTGGAATTAAT 59.393 40.000 2.51 0.00 45.87 1.40
700 2015 4.966805 ACTACTCCCTCCGATTGGAATTAA 59.033 41.667 2.51 0.00 45.87 1.40
701 2016 4.553678 ACTACTCCCTCCGATTGGAATTA 58.446 43.478 2.51 0.00 45.87 1.40
702 2017 3.385115 ACTACTCCCTCCGATTGGAATT 58.615 45.455 2.51 0.00 45.87 2.17
703 2018 2.966516 GACTACTCCCTCCGATTGGAAT 59.033 50.000 2.51 0.00 45.87 3.01
704 2019 2.024273 AGACTACTCCCTCCGATTGGAA 60.024 50.000 2.51 0.00 45.87 3.53
705 2020 1.569548 AGACTACTCCCTCCGATTGGA 59.430 52.381 0.51 0.51 43.88 3.53
706 2021 2.074729 AGACTACTCCCTCCGATTGG 57.925 55.000 0.00 0.00 0.00 3.16
707 2022 5.413213 CACTATAGACTACTCCCTCCGATTG 59.587 48.000 6.78 0.00 0.00 2.67
708 2023 5.310068 TCACTATAGACTACTCCCTCCGATT 59.690 44.000 6.78 0.00 0.00 3.34
709 2024 4.845225 TCACTATAGACTACTCCCTCCGAT 59.155 45.833 6.78 0.00 0.00 4.18
710 2025 4.229639 TCACTATAGACTACTCCCTCCGA 58.770 47.826 6.78 0.00 0.00 4.55
711 2026 4.620589 TCACTATAGACTACTCCCTCCG 57.379 50.000 6.78 0.00 0.00 4.63
712 2027 9.181061 GATATTTCACTATAGACTACTCCCTCC 57.819 40.741 6.78 0.00 0.00 4.30
713 2028 9.969001 AGATATTTCACTATAGACTACTCCCTC 57.031 37.037 6.78 0.00 0.00 4.30
779 2391 7.623999 ATGTGGTCCATAGTGAAATCTCTAT 57.376 36.000 0.00 0.37 34.17 1.98
852 2464 9.955208 CCGTAATTTTGGTAGGGATTTATAAAC 57.045 33.333 0.00 0.00 0.00 2.01
855 2467 7.662669 GCTCCGTAATTTTGGTAGGGATTTATA 59.337 37.037 0.00 0.00 35.53 0.98
856 2468 6.489022 GCTCCGTAATTTTGGTAGGGATTTAT 59.511 38.462 0.00 0.00 35.53 1.40
857 2469 5.824097 GCTCCGTAATTTTGGTAGGGATTTA 59.176 40.000 0.00 0.00 35.53 1.40
858 2470 4.643334 GCTCCGTAATTTTGGTAGGGATTT 59.357 41.667 0.00 0.00 35.53 2.17
859 2471 4.204799 GCTCCGTAATTTTGGTAGGGATT 58.795 43.478 0.00 0.00 35.53 3.01
863 2475 2.864343 CTCGCTCCGTAATTTTGGTAGG 59.136 50.000 0.00 0.00 0.00 3.18
865 2477 3.598019 ACTCGCTCCGTAATTTTGGTA 57.402 42.857 0.00 0.00 0.00 3.25
867 2479 7.974501 AGATATATACTCGCTCCGTAATTTTGG 59.025 37.037 0.00 0.00 0.00 3.28
871 2483 7.228308 GGGTAGATATATACTCGCTCCGTAATT 59.772 40.741 7.41 0.00 0.00 1.40
1009 2628 0.392193 CTCACCAGCCTCATCACCAC 60.392 60.000 0.00 0.00 0.00 4.16
1024 2643 2.934083 GGGACTGCTTGTTCCTCAC 58.066 57.895 1.20 0.00 41.27 3.51
1074 2696 2.708255 GAGGACGACGACGCTAGG 59.292 66.667 7.30 0.00 43.96 3.02
1122 2744 1.601171 CTGCAGGGTGGAGAAGGAG 59.399 63.158 5.57 0.00 38.14 3.69
1158 2786 1.450312 GATGTTGAGCACTCCGGGG 60.450 63.158 0.00 0.00 0.00 5.73
1164 2792 1.059098 TGTCCCTGATGTTGAGCACT 58.941 50.000 0.00 0.00 0.00 4.40
1206 2834 2.044946 AAGATGGAAGCGGGGTGC 60.045 61.111 0.00 0.00 46.98 5.01
1229 2857 6.679843 GCTACTAGCTGGTCGATTTATTAGT 58.320 40.000 5.78 0.00 38.45 2.24
1275 2903 1.970640 CCATATCACACATCCGAGGGA 59.029 52.381 0.00 0.00 35.55 4.20
1400 3028 5.649782 AATGAGCAATTAACCTGTCCTTG 57.350 39.130 0.00 0.00 0.00 3.61
1430 3058 4.026475 GTCACGCGAAGAGGAGATTAATTG 60.026 45.833 15.93 0.00 0.00 2.32
1501 3136 1.371183 CCCACAGACACCACACGAT 59.629 57.895 0.00 0.00 0.00 3.73
1605 3400 4.705507 AGTCTAGAGCAAACGTGGATAAGA 59.294 41.667 0.00 0.00 0.00 2.10
1615 3410 6.372103 TGTCTACTGTCTAGTCTAGAGCAAAC 59.628 42.308 9.97 5.30 38.36 2.93
1633 3428 1.348036 GGTTCCACTTGGCTGTCTACT 59.652 52.381 0.00 0.00 34.44 2.57
1634 3429 1.071699 TGGTTCCACTTGGCTGTCTAC 59.928 52.381 0.00 0.00 34.44 2.59
1635 3430 1.429930 TGGTTCCACTTGGCTGTCTA 58.570 50.000 0.00 0.00 34.44 2.59
1636 3431 0.550914 TTGGTTCCACTTGGCTGTCT 59.449 50.000 0.00 0.00 34.44 3.41
1637 3432 1.541588 GATTGGTTCCACTTGGCTGTC 59.458 52.381 0.00 0.00 34.44 3.51
1638 3433 1.620822 GATTGGTTCCACTTGGCTGT 58.379 50.000 0.00 0.00 34.44 4.40
1639 3434 0.523072 CGATTGGTTCCACTTGGCTG 59.477 55.000 0.00 0.00 34.44 4.85
1640 3435 0.400213 TCGATTGGTTCCACTTGGCT 59.600 50.000 0.00 0.00 34.44 4.75
1641 3436 1.243902 TTCGATTGGTTCCACTTGGC 58.756 50.000 0.00 0.00 34.44 4.52
1642 3437 4.275936 GGATATTCGATTGGTTCCACTTGG 59.724 45.833 0.00 0.00 0.00 3.61
1643 3438 4.024893 CGGATATTCGATTGGTTCCACTTG 60.025 45.833 0.00 0.00 0.00 3.16
1644 3439 4.127171 CGGATATTCGATTGGTTCCACTT 58.873 43.478 0.00 0.00 0.00 3.16
1705 3513 1.466167 CGCACAAGTCAAAGATCTGGG 59.534 52.381 0.00 0.00 0.00 4.45
1739 3547 6.291377 TGGTTTCATATAGATGGAGACTTGC 58.709 40.000 0.00 0.00 33.49 4.01
1781 3589 7.908917 AGTTCAGGTAGGGATGGATGATAATAT 59.091 37.037 0.00 0.00 0.00 1.28
1817 3625 3.488721 GGATCGTATATATGCCGCTCGTT 60.489 47.826 0.00 0.00 0.00 3.85
1891 3699 5.305902 TGTTCTCCAACCAGTGTGTCTATTA 59.694 40.000 0.00 0.00 0.00 0.98
1892 3700 4.102524 TGTTCTCCAACCAGTGTGTCTATT 59.897 41.667 0.00 0.00 0.00 1.73
1896 3704 2.325583 TGTTCTCCAACCAGTGTGTC 57.674 50.000 0.00 0.00 0.00 3.67
1959 3767 7.964666 TGGGGAGGGTATTTTAGTAAATTTG 57.035 36.000 0.00 0.00 35.61 2.32
1960 3768 7.504574 CGATGGGGAGGGTATTTTAGTAAATTT 59.495 37.037 0.00 0.00 35.61 1.82
1964 3772 5.218179 TCGATGGGGAGGGTATTTTAGTAA 58.782 41.667 0.00 0.00 0.00 2.24
1965 3773 4.818447 TCGATGGGGAGGGTATTTTAGTA 58.182 43.478 0.00 0.00 0.00 1.82
2013 3821 3.181458 GGAGCCCGACTTGTCCATTTATA 60.181 47.826 0.00 0.00 0.00 0.98
2036 3844 5.136105 AGGCAGACAAGAAAATATGGATCC 58.864 41.667 4.20 4.20 0.00 3.36
2046 3854 3.819368 TCACAATGAGGCAGACAAGAAA 58.181 40.909 0.00 0.00 0.00 2.52
2069 3877 2.411069 CAGCGCATATCACTGTCTATGC 59.589 50.000 11.47 16.41 44.29 3.14
2073 3881 0.105593 CCCAGCGCATATCACTGTCT 59.894 55.000 11.47 0.00 0.00 3.41
2087 3895 1.283321 ACTCTTTCCTTGGATCCCAGC 59.717 52.381 9.90 0.00 33.81 4.85
2106 3914 6.202516 AGACTAACTGCATCTGTCTCTAAC 57.797 41.667 6.13 0.00 33.31 2.34
2137 3945 9.533253 TCACTCATGACTTGTATACATGTATTG 57.467 33.333 22.90 19.33 41.14 1.90
2177 3988 9.152595 GTAGTCTAAGACTTAAATGACCAAAGG 57.847 37.037 0.00 0.00 40.28 3.11
2178 3989 9.930693 AGTAGTCTAAGACTTAAATGACCAAAG 57.069 33.333 0.00 0.00 40.28 2.77
2186 3997 9.425577 GACTGCAAAGTAGTCTAAGACTTAAAT 57.574 33.333 7.81 0.00 40.28 1.40
2198 4009 6.401581 GCATTGTTCTAGACTGCAAAGTAGTC 60.402 42.308 7.09 7.09 43.77 2.59
2239 4055 6.918569 GTCTATGTATACACACTGGCTTGTAG 59.081 42.308 7.96 2.38 37.54 2.74
2240 4056 6.378848 TGTCTATGTATACACACTGGCTTGTA 59.621 38.462 7.96 0.00 37.54 2.41
2241 4057 5.186992 TGTCTATGTATACACACTGGCTTGT 59.813 40.000 7.96 0.00 37.54 3.16
2242 4058 5.660460 TGTCTATGTATACACACTGGCTTG 58.340 41.667 7.96 0.00 37.54 4.01
2243 4059 5.422331 ACTGTCTATGTATACACACTGGCTT 59.578 40.000 7.96 0.00 37.54 4.35
2244 4060 4.956700 ACTGTCTATGTATACACACTGGCT 59.043 41.667 7.96 0.00 37.54 4.75
2245 4061 5.043903 CACTGTCTATGTATACACACTGGC 58.956 45.833 7.96 1.14 37.54 4.85
2246 4062 6.451064 TCACTGTCTATGTATACACACTGG 57.549 41.667 7.96 5.81 37.54 4.00
2247 4063 9.617975 CATATCACTGTCTATGTATACACACTG 57.382 37.037 7.96 11.22 37.54 3.66
2248 4064 8.300286 GCATATCACTGTCTATGTATACACACT 58.700 37.037 7.96 0.00 37.54 3.55
2249 4065 8.082242 TGCATATCACTGTCTATGTATACACAC 58.918 37.037 7.96 6.14 37.54 3.82
2250 4066 8.082242 GTGCATATCACTGTCTATGTATACACA 58.918 37.037 7.96 0.00 42.38 3.72
2251 4067 7.271438 CGTGCATATCACTGTCTATGTATACAC 59.729 40.741 7.96 0.00 43.46 2.90
2252 4068 7.305474 CGTGCATATCACTGTCTATGTATACA 58.695 38.462 8.27 8.27 43.46 2.29
2253 4069 6.747739 CCGTGCATATCACTGTCTATGTATAC 59.252 42.308 0.00 0.00 43.46 1.47
2254 4070 6.127730 CCCGTGCATATCACTGTCTATGTATA 60.128 42.308 0.00 0.00 43.46 1.47
2255 4071 5.336770 CCCGTGCATATCACTGTCTATGTAT 60.337 44.000 0.00 0.00 43.46 2.29
2256 4072 4.022329 CCCGTGCATATCACTGTCTATGTA 60.022 45.833 0.00 2.69 43.46 2.29
2257 4073 3.243873 CCCGTGCATATCACTGTCTATGT 60.244 47.826 0.00 0.00 43.46 2.29
2258 4074 3.005791 TCCCGTGCATATCACTGTCTATG 59.994 47.826 0.00 3.60 43.46 2.23
2259 4075 3.230976 TCCCGTGCATATCACTGTCTAT 58.769 45.455 0.00 0.00 43.46 1.98
2260 4076 2.661718 TCCCGTGCATATCACTGTCTA 58.338 47.619 0.00 0.00 43.46 2.59
2261 4077 1.485124 TCCCGTGCATATCACTGTCT 58.515 50.000 0.00 0.00 43.46 3.41
2262 4078 2.408050 GATCCCGTGCATATCACTGTC 58.592 52.381 0.00 0.00 43.46 3.51
2263 4079 1.070758 GGATCCCGTGCATATCACTGT 59.929 52.381 0.00 0.00 43.46 3.55
2264 4080 1.070601 TGGATCCCGTGCATATCACTG 59.929 52.381 9.90 0.00 43.46 3.66
2265 4081 1.423584 TGGATCCCGTGCATATCACT 58.576 50.000 9.90 0.00 43.46 3.41
2266 4082 2.146342 CTTGGATCCCGTGCATATCAC 58.854 52.381 9.90 0.00 42.23 3.06
2267 4083 1.072173 CCTTGGATCCCGTGCATATCA 59.928 52.381 9.90 0.00 0.00 2.15
2268 4084 1.347707 TCCTTGGATCCCGTGCATATC 59.652 52.381 9.90 0.00 0.00 1.63
2269 4085 1.434188 TCCTTGGATCCCGTGCATAT 58.566 50.000 9.90 0.00 0.00 1.78
2270 4086 1.134220 GTTCCTTGGATCCCGTGCATA 60.134 52.381 9.90 0.00 0.00 3.14
2271 4087 0.394352 GTTCCTTGGATCCCGTGCAT 60.394 55.000 9.90 0.00 0.00 3.96
2272 4088 1.002624 GTTCCTTGGATCCCGTGCA 60.003 57.895 9.90 0.00 0.00 4.57
2273 4089 1.002624 TGTTCCTTGGATCCCGTGC 60.003 57.895 9.90 0.00 0.00 5.34
2274 4090 0.613260 TCTGTTCCTTGGATCCCGTG 59.387 55.000 9.90 0.00 0.00 4.94
2275 4091 0.905357 CTCTGTTCCTTGGATCCCGT 59.095 55.000 9.90 0.00 0.00 5.28
2276 4092 1.134670 GTCTCTGTTCCTTGGATCCCG 60.135 57.143 9.90 0.00 0.00 5.14
2277 4093 1.909302 TGTCTCTGTTCCTTGGATCCC 59.091 52.381 9.90 0.00 0.00 3.85
2278 4094 2.834549 TCTGTCTCTGTTCCTTGGATCC 59.165 50.000 4.20 4.20 0.00 3.36
2279 4095 4.440880 CATCTGTCTCTGTTCCTTGGATC 58.559 47.826 0.00 0.00 0.00 3.36
2280 4096 3.370315 GCATCTGTCTCTGTTCCTTGGAT 60.370 47.826 0.00 0.00 0.00 3.41
2281 4097 2.027745 GCATCTGTCTCTGTTCCTTGGA 60.028 50.000 0.00 0.00 0.00 3.53
2282 4098 2.289882 TGCATCTGTCTCTGTTCCTTGG 60.290 50.000 0.00 0.00 0.00 3.61
2283 4099 3.001414 CTGCATCTGTCTCTGTTCCTTG 58.999 50.000 0.00 0.00 0.00 3.61
2284 4100 2.636893 ACTGCATCTGTCTCTGTTCCTT 59.363 45.455 0.00 0.00 0.00 3.36
2285 4101 2.255406 ACTGCATCTGTCTCTGTTCCT 58.745 47.619 0.00 0.00 0.00 3.36
2286 4102 2.758736 ACTGCATCTGTCTCTGTTCC 57.241 50.000 0.00 0.00 0.00 3.62
2287 4103 4.815269 ACTAACTGCATCTGTCTCTGTTC 58.185 43.478 0.00 0.00 0.00 3.18
2288 4104 4.526262 AGACTAACTGCATCTGTCTCTGTT 59.474 41.667 6.13 0.00 33.31 3.16
2289 4105 4.085733 AGACTAACTGCATCTGTCTCTGT 58.914 43.478 6.13 0.00 33.31 3.41
2290 4106 4.717233 AGACTAACTGCATCTGTCTCTG 57.283 45.455 6.13 0.00 33.31 3.35
2291 4107 5.736951 AAAGACTAACTGCATCTGTCTCT 57.263 39.130 10.67 0.00 37.05 3.10
2292 4108 6.090628 CAGAAAAGACTAACTGCATCTGTCTC 59.909 42.308 10.67 2.46 37.05 3.36
2293 4109 5.931146 CAGAAAAGACTAACTGCATCTGTCT 59.069 40.000 6.13 6.13 39.35 3.41
2294 4110 5.698545 ACAGAAAAGACTAACTGCATCTGTC 59.301 40.000 6.48 4.36 39.82 3.51
2295 4111 5.615289 ACAGAAAAGACTAACTGCATCTGT 58.385 37.500 6.48 6.48 39.49 3.41
2296 4112 5.698089 TGACAGAAAAGACTAACTGCATCTG 59.302 40.000 5.34 5.34 38.34 2.90
2297 4113 5.858381 TGACAGAAAAGACTAACTGCATCT 58.142 37.500 0.00 0.00 34.25 2.90
2298 4114 6.545504 TTGACAGAAAAGACTAACTGCATC 57.454 37.500 0.00 0.00 34.25 3.91
2299 4115 7.661437 TGTATTGACAGAAAAGACTAACTGCAT 59.339 33.333 0.00 0.00 34.25 3.96
2300 4116 6.989759 TGTATTGACAGAAAAGACTAACTGCA 59.010 34.615 0.00 0.00 34.25 4.41
2301 4117 7.421530 TGTATTGACAGAAAAGACTAACTGC 57.578 36.000 0.00 0.00 34.25 4.40
2302 4118 8.993121 ACATGTATTGACAGAAAAGACTAACTG 58.007 33.333 0.00 0.00 39.50 3.16
2312 4128 9.936759 TGACTTGTATACATGTATTGACAGAAA 57.063 29.630 22.90 7.39 39.50 2.52
2314 4130 9.533253 CATGACTTGTATACATGTATTGACAGA 57.467 33.333 22.90 11.60 39.50 3.41
2315 4131 9.533253 TCATGACTTGTATACATGTATTGACAG 57.467 33.333 22.90 16.06 39.50 3.51
2316 4132 9.533253 CTCATGACTTGTATACATGTATTGACA 57.467 33.333 22.90 18.32 41.14 3.58
2317 4133 9.534565 ACTCATGACTTGTATACATGTATTGAC 57.465 33.333 22.90 16.08 41.14 3.18
2318 4134 9.533253 CACTCATGACTTGTATACATGTATTGA 57.467 33.333 22.90 21.52 41.14 2.57
2319 4135 9.533253 TCACTCATGACTTGTATACATGTATTG 57.467 33.333 22.90 19.33 41.14 1.90
2336 4152 3.458044 AGGTGGACTAGTCACTCATGA 57.542 47.619 23.91 0.00 35.61 3.07
2337 4153 5.860941 ATAAGGTGGACTAGTCACTCATG 57.139 43.478 23.91 0.00 35.61 3.07
2338 4154 8.554490 AAATATAAGGTGGACTAGTCACTCAT 57.446 34.615 23.91 12.45 35.61 2.90
2339 4155 7.973048 AAATATAAGGTGGACTAGTCACTCA 57.027 36.000 23.91 10.43 35.61 3.41
2340 4156 7.711339 CCAAAATATAAGGTGGACTAGTCACTC 59.289 40.741 23.91 13.34 35.61 3.51
2341 4157 7.182206 ACCAAAATATAAGGTGGACTAGTCACT 59.818 37.037 23.91 15.21 35.61 3.41
2342 4158 7.336396 ACCAAAATATAAGGTGGACTAGTCAC 58.664 38.462 23.91 18.11 33.57 3.67
2343 4159 7.402071 AGACCAAAATATAAGGTGGACTAGTCA 59.598 37.037 23.91 7.95 34.95 3.41
2344 4160 7.793036 AGACCAAAATATAAGGTGGACTAGTC 58.207 38.462 14.87 14.87 34.95 2.59
2345 4161 7.750947 AGACCAAAATATAAGGTGGACTAGT 57.249 36.000 0.00 0.00 34.95 2.57
2346 4162 8.893727 CAAAGACCAAAATATAAGGTGGACTAG 58.106 37.037 6.07 0.00 35.53 2.57
2347 4163 8.607713 TCAAAGACCAAAATATAAGGTGGACTA 58.392 33.333 6.07 0.00 35.53 2.59
2348 4164 7.466804 TCAAAGACCAAAATATAAGGTGGACT 58.533 34.615 6.07 3.06 37.69 3.85
2349 4165 7.696992 TCAAAGACCAAAATATAAGGTGGAC 57.303 36.000 6.07 1.11 35.36 4.02
2350 4166 7.947890 ACTTCAAAGACCAAAATATAAGGTGGA 59.052 33.333 6.07 0.00 35.36 4.02
2351 4167 8.122472 ACTTCAAAGACCAAAATATAAGGTGG 57.878 34.615 0.00 0.00 35.36 4.61
2352 4168 9.014297 AGACTTCAAAGACCAAAATATAAGGTG 57.986 33.333 0.00 0.00 35.36 4.00
2353 4169 9.588096 AAGACTTCAAAGACCAAAATATAAGGT 57.412 29.630 0.00 0.00 38.63 3.50
2354 4170 9.846248 CAAGACTTCAAAGACCAAAATATAAGG 57.154 33.333 0.00 0.00 0.00 2.69
2355 4171 9.346725 GCAAGACTTCAAAGACCAAAATATAAG 57.653 33.333 0.00 0.00 0.00 1.73
2356 4172 9.077885 AGCAAGACTTCAAAGACCAAAATATAA 57.922 29.630 0.00 0.00 0.00 0.98
2357 4173 8.635765 AGCAAGACTTCAAAGACCAAAATATA 57.364 30.769 0.00 0.00 0.00 0.86
2358 4174 7.530426 AGCAAGACTTCAAAGACCAAAATAT 57.470 32.000 0.00 0.00 0.00 1.28
2359 4175 6.959639 AGCAAGACTTCAAAGACCAAAATA 57.040 33.333 0.00 0.00 0.00 1.40
2360 4176 5.859205 AGCAAGACTTCAAAGACCAAAAT 57.141 34.783 0.00 0.00 0.00 1.82
2361 4177 5.885912 AGTAGCAAGACTTCAAAGACCAAAA 59.114 36.000 0.00 0.00 0.00 2.44
2362 4178 5.437060 AGTAGCAAGACTTCAAAGACCAAA 58.563 37.500 0.00 0.00 0.00 3.28
2363 4179 5.036117 AGTAGCAAGACTTCAAAGACCAA 57.964 39.130 0.00 0.00 0.00 3.67
2364 4180 4.689612 AGTAGCAAGACTTCAAAGACCA 57.310 40.909 0.00 0.00 0.00 4.02
2365 4181 5.752712 CAAAGTAGCAAGACTTCAAAGACC 58.247 41.667 0.00 0.00 38.75 3.85
2366 4182 5.208503 GCAAAGTAGCAAGACTTCAAAGAC 58.791 41.667 0.00 0.00 38.75 3.01
2367 4183 4.881273 TGCAAAGTAGCAAGACTTCAAAGA 59.119 37.500 0.00 0.00 42.46 2.52
2368 4184 5.173774 TGCAAAGTAGCAAGACTTCAAAG 57.826 39.130 0.00 0.00 42.46 2.77
2369 4185 4.640201 ACTGCAAAGTAGCAAGACTTCAAA 59.360 37.500 0.00 0.00 45.13 2.69
2370 4186 4.199310 ACTGCAAAGTAGCAAGACTTCAA 58.801 39.130 0.00 0.00 45.13 2.69
2371 4187 3.808728 ACTGCAAAGTAGCAAGACTTCA 58.191 40.909 0.00 0.00 45.13 3.02
2372 4188 4.820284 AACTGCAAAGTAGCAAGACTTC 57.180 40.909 0.00 0.00 45.13 3.01
2373 4189 5.823045 ACTAAACTGCAAAGTAGCAAGACTT 59.177 36.000 0.00 0.00 45.13 3.01
2374 4190 5.368989 ACTAAACTGCAAAGTAGCAAGACT 58.631 37.500 0.00 0.00 45.13 3.24
2375 4191 5.674933 ACTAAACTGCAAAGTAGCAAGAC 57.325 39.130 0.00 0.00 45.13 3.01
2376 4192 6.522054 AGTACTAAACTGCAAAGTAGCAAGA 58.478 36.000 0.00 0.00 45.13 3.02
2377 4193 6.787085 AGTACTAAACTGCAAAGTAGCAAG 57.213 37.500 0.00 0.00 45.13 4.01
2378 4194 7.439381 ACTAGTACTAAACTGCAAAGTAGCAA 58.561 34.615 3.76 0.00 45.13 3.91
2379 4195 6.989659 ACTAGTACTAAACTGCAAAGTAGCA 58.010 36.000 3.76 0.00 43.35 3.49
2380 4196 8.025445 TGTACTAGTACTAAACTGCAAAGTAGC 58.975 37.037 28.56 1.80 39.39 3.58
2381 4197 9.903682 TTGTACTAGTACTAAACTGCAAAGTAG 57.096 33.333 28.56 0.00 39.39 2.57
2395 4211 9.656323 TGGATGGAGAATTATTGTACTAGTACT 57.344 33.333 28.56 15.37 37.00 2.73
2396 4212 9.915629 CTGGATGGAGAATTATTGTACTAGTAC 57.084 37.037 23.58 23.58 36.63 2.73
2397 4213 9.877222 TCTGGATGGAGAATTATTGTACTAGTA 57.123 33.333 0.00 0.00 0.00 1.82
2398 4214 8.783660 TCTGGATGGAGAATTATTGTACTAGT 57.216 34.615 0.00 0.00 0.00 2.57
2399 4215 9.868277 GATCTGGATGGAGAATTATTGTACTAG 57.132 37.037 0.00 0.00 0.00 2.57
2400 4216 9.607333 AGATCTGGATGGAGAATTATTGTACTA 57.393 33.333 0.00 0.00 0.00 1.82
2401 4217 8.503428 AGATCTGGATGGAGAATTATTGTACT 57.497 34.615 0.00 0.00 0.00 2.73
2402 4218 9.646427 GTAGATCTGGATGGAGAATTATTGTAC 57.354 37.037 5.18 0.00 0.00 2.90
2403 4219 9.379770 TGTAGATCTGGATGGAGAATTATTGTA 57.620 33.333 5.18 0.00 0.00 2.41
2404 4220 8.267620 TGTAGATCTGGATGGAGAATTATTGT 57.732 34.615 5.18 0.00 0.00 2.71
2405 4221 9.217278 CTTGTAGATCTGGATGGAGAATTATTG 57.783 37.037 5.18 0.00 0.00 1.90
2406 4222 7.882271 GCTTGTAGATCTGGATGGAGAATTATT 59.118 37.037 5.18 0.00 0.00 1.40
2407 4223 7.237263 AGCTTGTAGATCTGGATGGAGAATTAT 59.763 37.037 5.18 0.00 0.00 1.28
2408 4224 6.556495 AGCTTGTAGATCTGGATGGAGAATTA 59.444 38.462 5.18 0.00 0.00 1.40
2409 4225 5.369110 AGCTTGTAGATCTGGATGGAGAATT 59.631 40.000 5.18 0.00 0.00 2.17
2410 4226 4.906664 AGCTTGTAGATCTGGATGGAGAAT 59.093 41.667 5.18 0.00 0.00 2.40
2411 4227 4.293494 AGCTTGTAGATCTGGATGGAGAA 58.707 43.478 5.18 0.00 0.00 2.87
2412 4228 3.921104 AGCTTGTAGATCTGGATGGAGA 58.079 45.455 5.18 0.00 0.00 3.71
2413 4229 4.832266 ACTAGCTTGTAGATCTGGATGGAG 59.168 45.833 5.18 0.00 0.00 3.86
2414 4230 4.586421 CACTAGCTTGTAGATCTGGATGGA 59.414 45.833 5.18 0.00 0.00 3.41
2415 4231 4.343526 ACACTAGCTTGTAGATCTGGATGG 59.656 45.833 5.18 0.00 0.00 3.51
2416 4232 5.288015 CACACTAGCTTGTAGATCTGGATG 58.712 45.833 5.18 0.00 0.00 3.51
2417 4233 4.343526 CCACACTAGCTTGTAGATCTGGAT 59.656 45.833 5.18 0.00 0.00 3.41
2418 4234 3.701542 CCACACTAGCTTGTAGATCTGGA 59.298 47.826 5.18 0.00 0.00 3.86
2419 4235 3.701542 TCCACACTAGCTTGTAGATCTGG 59.298 47.826 5.18 1.85 0.00 3.86
2420 4236 4.991153 TCCACACTAGCTTGTAGATCTG 57.009 45.455 5.18 0.00 0.00 2.90
2421 4237 4.404073 CCTTCCACACTAGCTTGTAGATCT 59.596 45.833 0.00 0.00 0.00 2.75
2422 4238 4.442192 CCCTTCCACACTAGCTTGTAGATC 60.442 50.000 0.00 0.00 0.00 2.75
2423 4239 3.452627 CCCTTCCACACTAGCTTGTAGAT 59.547 47.826 0.00 0.00 0.00 1.98
2424 4240 2.832129 CCCTTCCACACTAGCTTGTAGA 59.168 50.000 0.00 0.00 0.00 2.59
2447 4263 8.311395 AGTGGAACATAACAATAGAGATCAGA 57.689 34.615 0.00 0.00 44.52 3.27
2461 4277 9.824216 ACTAGGATAAGCTATAGTGGAACATAA 57.176 33.333 0.84 0.00 44.52 1.90
2462 4278 9.244292 CACTAGGATAAGCTATAGTGGAACATA 57.756 37.037 0.84 0.00 44.52 2.29
2463 4279 8.128322 CACTAGGATAAGCTATAGTGGAACAT 57.872 38.462 0.84 0.00 44.52 2.71
2464 4280 7.526142 CACTAGGATAAGCTATAGTGGAACA 57.474 40.000 0.84 0.00 40.80 3.18
2469 4285 5.949354 AGCTCCACTAGGATAAGCTATAGTG 59.051 44.000 8.79 12.48 44.70 2.74
2470 4286 5.949354 CAGCTCCACTAGGATAAGCTATAGT 59.051 44.000 9.83 0.00 44.70 2.12
2471 4287 6.094881 GTCAGCTCCACTAGGATAAGCTATAG 59.905 46.154 9.83 0.00 44.70 1.31
2472 4288 5.946972 GTCAGCTCCACTAGGATAAGCTATA 59.053 44.000 9.83 1.76 44.70 1.31
2473 4289 4.770010 GTCAGCTCCACTAGGATAAGCTAT 59.230 45.833 9.83 0.00 44.70 2.97
2474 4290 4.145807 GTCAGCTCCACTAGGATAAGCTA 58.854 47.826 9.83 0.16 44.70 3.32
2475 4291 2.962421 GTCAGCTCCACTAGGATAAGCT 59.038 50.000 5.63 5.63 44.70 3.74
2476 4292 2.695666 TGTCAGCTCCACTAGGATAAGC 59.304 50.000 0.00 0.00 44.70 3.09
2482 4298 0.250513 GGGTTGTCAGCTCCACTAGG 59.749 60.000 0.00 0.00 0.00 3.02
2501 4317 8.918961 TGTAAACAGTTAAATCAAACAAGTGG 57.081 30.769 0.00 0.00 0.00 4.00
2597 4460 8.742554 AACAGGCTTGTTATTTTCTTATTTCG 57.257 30.769 13.18 0.00 45.45 3.46
2614 4477 5.099042 ACTGACGGATAATAAACAGGCTT 57.901 39.130 0.00 0.00 0.00 4.35
2616 4479 8.251721 AGATATACTGACGGATAATAAACAGGC 58.748 37.037 0.00 0.00 0.00 4.85
2737 4600 3.775654 AGCCCCTTCTTCTCCGCG 61.776 66.667 0.00 0.00 0.00 6.46
2778 4641 6.760298 TCAATCTATCTGAAAGCATGAGTGAC 59.240 38.462 0.00 0.00 0.00 3.67
2798 4661 8.287503 ACTTTTTACCGAATACAGTTGTCAATC 58.712 33.333 0.00 0.00 0.00 2.67
2801 4664 8.836268 ATACTTTTTACCGAATACAGTTGTCA 57.164 30.769 0.00 0.00 0.00 3.58
2826 4689 5.279506 CCTGAGCTTAGTTCAAGAGGTACAA 60.280 44.000 4.63 0.00 36.22 2.41
2899 4762 6.560253 TCTATCAAAGTTGTTGCTTCCTTC 57.440 37.500 0.00 0.00 0.00 3.46
2900 4763 8.635765 TTATCTATCAAAGTTGTTGCTTCCTT 57.364 30.769 0.00 0.00 0.00 3.36
2901 4764 8.635765 TTTATCTATCAAAGTTGTTGCTTCCT 57.364 30.769 0.00 0.00 0.00 3.36
2961 4902 8.761575 TTCCAAATGAAATAAGAACTCAATGC 57.238 30.769 0.00 0.00 0.00 3.56
2980 4921 4.255301 GCAATCTCAATGCCATTTCCAAA 58.745 39.130 0.00 0.00 37.85 3.28
2993 4934 5.164233 TGTTTCGTGTTTTTGCAATCTCAA 58.836 33.333 0.00 0.00 0.00 3.02
3008 4949 3.009723 ACATGCCTCCTATTGTTTCGTG 58.990 45.455 0.00 0.00 0.00 4.35
3009 4950 3.270877 GACATGCCTCCTATTGTTTCGT 58.729 45.455 0.00 0.00 0.00 3.85
3050 4992 7.630242 ACAAGAACTCTGAATTTCTGTCAAA 57.370 32.000 0.00 0.00 32.26 2.69
3051 4993 7.336679 TCAACAAGAACTCTGAATTTCTGTCAA 59.663 33.333 0.00 0.00 32.26 3.18
3052 4994 6.823182 TCAACAAGAACTCTGAATTTCTGTCA 59.177 34.615 0.00 0.00 32.26 3.58
3078 5020 3.381908 TGCAGAATAACGGTGTGGTTTTT 59.618 39.130 0.00 0.00 0.00 1.94
3089 5031 6.017933 GTGACTGATTTCTTGCAGAATAACG 58.982 40.000 0.00 0.00 33.67 3.18
3093 5035 5.068636 AGTGTGACTGATTTCTTGCAGAAT 58.931 37.500 0.00 0.00 33.67 2.40
3117 5059 3.649502 TCAGATCCATATGCAGGTGTCAT 59.350 43.478 0.00 0.00 0.00 3.06
3119 5061 3.758755 TCAGATCCATATGCAGGTGTC 57.241 47.619 0.00 0.00 0.00 3.67
3148 5090 5.972382 GTCGTCTATTTCAGAAGCGACTTAT 59.028 40.000 0.00 0.00 43.88 1.73
3149 5091 5.330295 GTCGTCTATTTCAGAAGCGACTTA 58.670 41.667 0.00 1.03 43.88 2.24
3185 5127 2.120909 GCCCATGTTCCCGGATGTG 61.121 63.158 0.73 0.00 0.00 3.21
3224 5166 0.037232 GCTCGTACCCTTTGAGTGCT 60.037 55.000 0.00 0.00 32.32 4.40
3332 5274 2.276740 GTGCCTCCCATCCCCTTG 59.723 66.667 0.00 0.00 0.00 3.61
3627 5762 8.689972 GGTCTGATCATTTTCTGAAACCAATAT 58.310 33.333 1.58 0.00 37.44 1.28
3638 5775 7.688343 AGAAGAAGAAGGTCTGATCATTTTCT 58.312 34.615 0.00 0.86 0.00 2.52
3650 5787 6.206438 AGCATGAAAAAGAGAAGAAGAAGGTC 59.794 38.462 0.00 0.00 0.00 3.85
3722 5870 2.674380 GGTGAGGCCCTGCAGTTG 60.674 66.667 13.81 4.44 0.00 3.16
3814 5962 5.931441 AAGAAGAAGTCCAGTTTGATTCG 57.069 39.130 0.00 0.00 0.00 3.34
3869 6025 4.637091 TCACCTGTCAATTACATGCATGAG 59.363 41.667 32.75 16.11 37.50 2.90
3911 6070 2.176546 CCAACTGTTGCGCCATCG 59.823 61.111 14.94 0.00 39.07 3.84
3963 6133 3.397955 TCCTTTCCTTAGGGAGCAGTTTT 59.602 43.478 0.00 0.00 43.29 2.43
3989 6159 9.062524 GTTACACATGAGCCAATATAACCATTA 57.937 33.333 0.00 0.00 0.00 1.90
4012 6220 8.402472 CACATTTTGAAGTAACCAGTTCAGTTA 58.598 33.333 0.00 0.00 43.34 2.24
4028 6236 6.279123 TGTAGCAATTTCAGCACATTTTGAA 58.721 32.000 0.00 0.00 0.00 2.69
4034 6243 6.694447 AGAAAATGTAGCAATTTCAGCACAT 58.306 32.000 10.90 0.00 36.18 3.21
4177 6391 7.989826 ACTTCTCCATCTTAACATATGTTTGC 58.010 34.615 25.31 0.00 39.31 3.68
4182 6396 9.605275 TCTGAAACTTCTCCATCTTAACATATG 57.395 33.333 0.00 0.00 0.00 1.78
4222 6437 3.058639 GTCTGAAACAACAGAGGTGCATC 60.059 47.826 0.00 0.00 45.67 3.91
4414 6643 7.364970 CACATGATGAACAAACTGAAGAATCA 58.635 34.615 0.00 0.00 0.00 2.57
4443 6677 5.454232 CCATTTGAACTGTTGTTTACACGAC 59.546 40.000 0.00 0.00 36.39 4.34
4513 6761 2.756760 CCATGATCCCCACAACTCAAAG 59.243 50.000 0.00 0.00 0.00 2.77
4745 7005 2.791868 GGAGAAGGCGAGAGGAGGC 61.792 68.421 0.00 0.00 0.00 4.70
4866 7127 0.689055 ATTCTGCAGCTGACCTGACA 59.311 50.000 20.43 3.32 44.64 3.58
5029 7311 4.861462 CAGAATAATCATCGATCCGGACAG 59.139 45.833 6.12 3.44 0.00 3.51
5181 7465 4.142315 GCAATACTGCTCACAATTCATGGT 60.142 41.667 0.00 0.00 45.74 3.55
5255 7543 3.799366 TCGAGCAAACTAAAGGTGTTGA 58.201 40.909 0.00 0.00 0.00 3.18
5309 7599 1.141254 TCAGTGAAACCGCCCTTTGTA 59.859 47.619 0.00 0.00 37.80 2.41
5318 7608 6.648725 CTAAGAAGGTAATCAGTGAAACCG 57.351 41.667 17.75 4.11 37.80 4.44


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.