Multiple sequence alignment - TraesCS5B01G299400

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G299400 chr5B 100.000 6134 0 0 1 6134 482997039 483003172 0.000000e+00 11328.0
1 TraesCS5B01G299400 chr5B 92.821 390 22 3 5749 6133 548558793 548559181 1.490000e-155 560.0
2 TraesCS5B01G299400 chr5B 91.304 391 28 3 5749 6134 503311468 503311079 4.210000e-146 529.0
3 TraesCS5B01G299400 chr5B 93.694 333 19 2 5749 6081 631453936 631453606 1.190000e-136 497.0
4 TraesCS5B01G299400 chr5B 91.813 342 20 7 651 987 482987814 482988152 2.590000e-128 470.0
5 TraesCS5B01G299400 chr5B 82.576 396 39 16 3378 3773 576925546 576925911 7.670000e-84 322.0
6 TraesCS5B01G299400 chr5B 89.116 147 16 0 5627 5773 548558592 548558738 3.780000e-42 183.0
7 TraesCS5B01G299400 chr5B 93.939 66 4 0 498 563 482317181 482317246 3.910000e-17 100.0
8 TraesCS5B01G299400 chr5B 96.491 57 1 1 596 651 482316202 482316258 6.550000e-15 93.5
9 TraesCS5B01G299400 chr5B 96.491 57 1 1 596 651 482318037 482318093 6.550000e-15 93.5
10 TraesCS5B01G299400 chr5B 100.000 31 0 0 5596 5626 483002580 483002610 2.390000e-04 58.4
11 TraesCS5B01G299400 chr5B 100.000 31 0 0 5542 5572 483002634 483002664 2.390000e-04 58.4
12 TraesCS5B01G299400 chr5A 95.974 4223 109 29 653 4849 510913951 510909764 0.000000e+00 6800.0
13 TraesCS5B01G299400 chr5A 91.501 553 28 11 4849 5400 510909688 510909154 0.000000e+00 743.0
14 TraesCS5B01G299400 chr5A 90.047 211 11 4 5390 5595 510908946 510908741 1.310000e-66 265.0
15 TraesCS5B01G299400 chr5A 94.667 75 3 1 581 654 510490643 510490569 1.400000e-21 115.0
16 TraesCS5B01G299400 chr5A 79.891 184 11 6 497 654 510489694 510489511 1.810000e-20 111.0
17 TraesCS5B01G299400 chr5A 81.761 159 5 3 520 654 510537858 510537700 1.810000e-20 111.0
18 TraesCS5B01G299400 chr5A 84.416 77 5 3 497 566 510490759 510490683 1.100000e-07 69.4
19 TraesCS5B01G299400 chr5D 94.680 3590 104 36 634 4169 403062566 403066122 0.000000e+00 5491.0
20 TraesCS5B01G299400 chr5D 97.059 680 14 4 4166 4843 403066244 403066919 0.000000e+00 1140.0
21 TraesCS5B01G299400 chr5D 91.845 699 25 15 4851 5540 403067004 403067679 0.000000e+00 946.0
22 TraesCS5B01G299400 chr5D 89.510 143 15 0 5631 5773 428667413 428667271 1.360000e-41 182.0
23 TraesCS5B01G299400 chr5D 95.000 60 0 1 520 576 402963194 402963253 2.350000e-14 91.6
24 TraesCS5B01G299400 chr6B 88.828 546 58 3 3061 3604 214885006 214884462 0.000000e+00 667.0
25 TraesCS5B01G299400 chr6B 89.796 392 33 4 5749 6134 86668728 86669118 4.270000e-136 496.0
26 TraesCS5B01G299400 chr6B 94.366 71 4 0 2346 2416 214885059 214884989 6.500000e-20 110.0
27 TraesCS5B01G299400 chr6B 91.892 74 1 2 6066 6134 221749199 221749272 1.410000e-16 99.0
28 TraesCS5B01G299400 chr7B 93.611 360 20 3 5749 6108 646374198 646373842 9.050000e-148 534.0
29 TraesCS5B01G299400 chr7B 94.294 333 18 1 5749 6081 620603382 620603051 5.490000e-140 508.0
30 TraesCS5B01G299400 chr7B 92.143 140 11 0 5634 5773 50616526 50616665 1.350000e-46 198.0
31 TraesCS5B01G299400 chr7B 88.312 154 14 4 5622 5773 646374404 646374253 1.360000e-41 182.0
32 TraesCS5B01G299400 chr2B 93.075 361 17 3 5749 6108 209249340 209248987 7.050000e-144 521.0
33 TraesCS5B01G299400 chr2B 94.895 333 14 2 5749 6081 244170797 244170468 9.110000e-143 518.0
34 TraesCS5B01G299400 chr2B 90.000 140 14 0 5634 5773 244170991 244170852 1.360000e-41 182.0
35 TraesCS5B01G299400 chr3B 95.137 329 14 2 5749 6077 777199341 777199015 9.110000e-143 518.0
36 TraesCS5B01G299400 chr3B 88.889 153 14 3 5623 5773 758727198 758727349 1.050000e-42 185.0
37 TraesCS5B01G299400 chr3B 91.729 133 11 0 5641 5773 777199528 777199396 1.050000e-42 185.0
38 TraesCS5B01G299400 chr1B 89.655 145 14 1 5629 5773 346415306 346415163 3.780000e-42 183.0
39 TraesCS5B01G299400 chr4D 89.116 147 15 1 5627 5773 13214230 13214085 1.360000e-41 182.0
40 TraesCS5B01G299400 chr4D 90.541 74 2 2 6066 6134 13213626 13213553 6.550000e-15 93.5
41 TraesCS5B01G299400 chr3D 97.183 71 2 0 2346 2416 335661894 335661964 3.000000e-23 121.0
42 TraesCS5B01G299400 chr3D 97.059 68 2 0 2346 2413 335658239 335658306 1.400000e-21 115.0


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G299400 chr5B 482997039 483003172 6133 False 3814.933333 11328 100.000000 1 6134 3 chr5B.!!$F4 6133
1 TraesCS5B01G299400 chr5B 548558592 548559181 589 False 371.500000 560 90.968500 5627 6133 2 chr5B.!!$F5 506
2 TraesCS5B01G299400 chr5A 510908741 510913951 5210 True 2602.666667 6800 92.507333 653 5595 3 chr5A.!!$R3 4942
3 TraesCS5B01G299400 chr5D 403062566 403067679 5113 False 2525.666667 5491 94.528000 634 5540 3 chr5D.!!$F2 4906
4 TraesCS5B01G299400 chr6B 214884462 214885059 597 True 388.500000 667 91.597000 2346 3604 2 chr6B.!!$R1 1258
5 TraesCS5B01G299400 chr7B 646373842 646374404 562 True 358.000000 534 90.961500 5622 6108 2 chr7B.!!$R2 486
6 TraesCS5B01G299400 chr2B 244170468 244170991 523 True 350.000000 518 92.447500 5634 6081 2 chr2B.!!$R2 447
7 TraesCS5B01G299400 chr3B 777199015 777199528 513 True 351.500000 518 93.433000 5641 6077 2 chr3B.!!$R1 436

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
240 241 0.034896 GATTGACCACACACCGTCCT 59.965 55.000 0.00 0.0 0.00 3.85 F
241 242 0.034896 ATTGACCACACACCGTCCTC 59.965 55.000 0.00 0.0 0.00 3.71 F
477 478 0.108804 CGCCCGTTATGACTGTGAGT 60.109 55.000 0.00 0.0 0.00 3.41 F
545 546 0.179192 TACGTACTGTTGGTAGCGCG 60.179 55.000 0.00 0.0 32.44 6.86 F
556 557 0.305922 GGTAGCGCGTCACGTACTAT 59.694 55.000 8.43 0.0 46.11 2.12 F
2293 2344 0.464735 AGGCAAGTGCGTGGTGTTAA 60.465 50.000 0.00 0.0 43.26 2.01 F
3114 3169 2.290832 TGTCAGCCATGTGCAGGAATTA 60.291 45.455 8.58 0.0 44.83 1.40 F
3804 3859 1.377856 GCCAGGAAGCCCTTCACTC 60.378 63.158 9.95 0.0 42.02 3.51 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1684 1728 0.038744 CACACCTTGAGCAATCCCCT 59.961 55.000 0.00 0.00 0.00 4.79 R
1685 1729 1.598701 GCACACCTTGAGCAATCCCC 61.599 60.000 0.00 0.00 34.08 4.81 R
2293 2344 1.452108 GGATTAAGGCCAGCACGCT 60.452 57.895 5.01 0.00 0.00 5.07 R
2502 2553 4.565962 CAGATTGTTCTCCGAACATCTCAG 59.434 45.833 9.91 4.71 0.00 3.35 R
2575 2626 9.794685 CCAAAGAGCTTAGAAGAATAATTTTCC 57.205 33.333 0.00 0.00 0.00 3.13 R
3778 3833 2.643232 GGCTTCCTGGCTTTGCTGG 61.643 63.158 0.00 0.00 38.32 4.85 R
4572 4754 0.473755 TATCATGCGCCATTCCTGGT 59.526 50.000 4.18 0.00 45.10 4.00 R
5616 6105 0.103208 AAAATTTGCCACGCACCGAA 59.897 45.000 0.00 0.00 38.71 4.30 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
17 18 3.381983 TCGGCGCATCCACTGAGT 61.382 61.111 10.83 0.00 34.01 3.41
19 20 3.503363 GGCGCATCCACTGAGTGC 61.503 66.667 10.83 0.00 38.01 4.40
22 23 3.503363 GCATCCACTGAGTGCGGC 61.503 66.667 7.16 6.35 31.34 6.53
23 24 3.190849 CATCCACTGAGTGCGGCG 61.191 66.667 7.16 0.51 31.34 6.46
24 25 4.457496 ATCCACTGAGTGCGGCGG 62.457 66.667 9.78 0.00 31.34 6.13
26 27 4.063967 CCACTGAGTGCGGCGGTA 62.064 66.667 9.78 0.00 31.34 4.02
27 28 2.507102 CACTGAGTGCGGCGGTAG 60.507 66.667 9.78 0.00 0.00 3.18
28 29 3.760035 ACTGAGTGCGGCGGTAGG 61.760 66.667 9.78 0.00 0.00 3.18
29 30 4.514577 CTGAGTGCGGCGGTAGGG 62.515 72.222 9.78 0.00 0.00 3.53
39 40 4.404098 CGGTAGGGCGCCTGGTTT 62.404 66.667 28.56 9.66 34.61 3.27
40 41 2.750237 GGTAGGGCGCCTGGTTTG 60.750 66.667 28.56 0.00 34.61 2.93
41 42 3.440415 GTAGGGCGCCTGGTTTGC 61.440 66.667 28.56 7.55 34.61 3.68
42 43 3.960136 TAGGGCGCCTGGTTTGCA 61.960 61.111 28.56 0.00 34.61 4.08
43 44 3.918253 TAGGGCGCCTGGTTTGCAG 62.918 63.158 28.56 0.00 34.61 4.41
45 46 3.064324 GGCGCCTGGTTTGCAGAT 61.064 61.111 22.15 0.00 0.00 2.90
46 47 2.180017 GCGCCTGGTTTGCAGATG 59.820 61.111 0.00 0.00 0.00 2.90
47 48 2.334946 GCGCCTGGTTTGCAGATGA 61.335 57.895 0.00 0.00 0.00 2.92
48 49 1.865788 GCGCCTGGTTTGCAGATGAA 61.866 55.000 0.00 0.00 0.00 2.57
49 50 0.169672 CGCCTGGTTTGCAGATGAAG 59.830 55.000 0.00 0.00 0.00 3.02
50 51 0.529378 GCCTGGTTTGCAGATGAAGG 59.471 55.000 0.00 0.00 0.00 3.46
51 52 0.529378 CCTGGTTTGCAGATGAAGGC 59.471 55.000 0.00 0.00 0.00 4.35
52 53 0.169672 CTGGTTTGCAGATGAAGGCG 59.830 55.000 0.00 0.00 0.00 5.52
53 54 0.250684 TGGTTTGCAGATGAAGGCGA 60.251 50.000 0.00 0.00 0.00 5.54
54 55 0.449388 GGTTTGCAGATGAAGGCGAG 59.551 55.000 0.00 0.00 0.00 5.03
55 56 1.442769 GTTTGCAGATGAAGGCGAGA 58.557 50.000 0.00 0.00 0.00 4.04
56 57 2.012673 GTTTGCAGATGAAGGCGAGAT 58.987 47.619 0.00 0.00 0.00 2.75
57 58 1.660167 TTGCAGATGAAGGCGAGATG 58.340 50.000 0.00 0.00 0.00 2.90
58 59 0.538584 TGCAGATGAAGGCGAGATGT 59.461 50.000 0.00 0.00 0.00 3.06
59 60 0.935898 GCAGATGAAGGCGAGATGTG 59.064 55.000 0.00 0.00 0.00 3.21
60 61 1.741732 GCAGATGAAGGCGAGATGTGT 60.742 52.381 0.00 0.00 0.00 3.72
61 62 2.481969 GCAGATGAAGGCGAGATGTGTA 60.482 50.000 0.00 0.00 0.00 2.90
62 63 3.119291 CAGATGAAGGCGAGATGTGTAC 58.881 50.000 0.00 0.00 0.00 2.90
63 64 3.027412 AGATGAAGGCGAGATGTGTACT 58.973 45.455 0.00 0.00 0.00 2.73
64 65 4.036852 CAGATGAAGGCGAGATGTGTACTA 59.963 45.833 0.00 0.00 0.00 1.82
65 66 4.645136 AGATGAAGGCGAGATGTGTACTAA 59.355 41.667 0.00 0.00 0.00 2.24
66 67 5.303078 AGATGAAGGCGAGATGTGTACTAAT 59.697 40.000 0.00 0.00 0.00 1.73
67 68 6.490381 AGATGAAGGCGAGATGTGTACTAATA 59.510 38.462 0.00 0.00 0.00 0.98
68 69 5.828747 TGAAGGCGAGATGTGTACTAATAC 58.171 41.667 0.00 0.00 0.00 1.89
69 70 4.850347 AGGCGAGATGTGTACTAATACC 57.150 45.455 0.00 0.00 0.00 2.73
70 71 4.471548 AGGCGAGATGTGTACTAATACCT 58.528 43.478 0.00 0.00 0.00 3.08
71 72 5.628130 AGGCGAGATGTGTACTAATACCTA 58.372 41.667 0.00 0.00 0.00 3.08
72 73 5.706369 AGGCGAGATGTGTACTAATACCTAG 59.294 44.000 0.00 0.00 0.00 3.02
73 74 5.472820 GGCGAGATGTGTACTAATACCTAGT 59.527 44.000 0.00 0.00 43.58 2.57
74 75 6.652481 GGCGAGATGTGTACTAATACCTAGTA 59.348 42.308 0.00 0.00 41.35 1.82
75 76 7.173907 GGCGAGATGTGTACTAATACCTAGTAA 59.826 40.741 0.00 0.00 43.31 2.24
76 77 8.229137 GCGAGATGTGTACTAATACCTAGTAAG 58.771 40.741 0.00 0.00 43.31 2.34
77 78 9.486497 CGAGATGTGTACTAATACCTAGTAAGA 57.514 37.037 0.00 0.00 43.31 2.10
114 115 4.432741 GCCCCCTCAGCCTTCCAC 62.433 72.222 0.00 0.00 0.00 4.02
115 116 2.935481 CCCCCTCAGCCTTCCACA 60.935 66.667 0.00 0.00 0.00 4.17
116 117 2.311854 CCCCCTCAGCCTTCCACAT 61.312 63.158 0.00 0.00 0.00 3.21
117 118 0.988145 CCCCCTCAGCCTTCCACATA 60.988 60.000 0.00 0.00 0.00 2.29
118 119 0.471617 CCCCTCAGCCTTCCACATAG 59.528 60.000 0.00 0.00 0.00 2.23
119 120 0.179034 CCCTCAGCCTTCCACATAGC 60.179 60.000 0.00 0.00 0.00 2.97
120 121 0.835941 CCTCAGCCTTCCACATAGCT 59.164 55.000 0.00 0.00 35.52 3.32
121 122 1.202627 CCTCAGCCTTCCACATAGCTC 60.203 57.143 0.00 0.00 31.93 4.09
122 123 0.833287 TCAGCCTTCCACATAGCTCC 59.167 55.000 0.00 0.00 31.93 4.70
123 124 0.531532 CAGCCTTCCACATAGCTCCG 60.532 60.000 0.00 0.00 31.93 4.63
124 125 1.889573 GCCTTCCACATAGCTCCGC 60.890 63.158 0.00 0.00 0.00 5.54
125 126 1.227674 CCTTCCACATAGCTCCGCC 60.228 63.158 0.00 0.00 0.00 6.13
126 127 1.522092 CTTCCACATAGCTCCGCCA 59.478 57.895 0.00 0.00 0.00 5.69
127 128 0.107456 CTTCCACATAGCTCCGCCAT 59.893 55.000 0.00 0.00 0.00 4.40
128 129 0.546122 TTCCACATAGCTCCGCCATT 59.454 50.000 0.00 0.00 0.00 3.16
129 130 0.179048 TCCACATAGCTCCGCCATTG 60.179 55.000 0.00 0.00 0.00 2.82
130 131 1.168407 CCACATAGCTCCGCCATTGG 61.168 60.000 0.00 0.00 0.00 3.16
131 132 1.526917 ACATAGCTCCGCCATTGGC 60.527 57.895 18.10 18.10 46.75 4.52
146 147 3.346606 GGCCTTGCCTATACGCGC 61.347 66.667 5.73 0.00 46.69 6.86
147 148 3.346606 GCCTTGCCTATACGCGCC 61.347 66.667 5.73 0.00 0.00 6.53
148 149 3.036084 CCTTGCCTATACGCGCCG 61.036 66.667 5.73 0.00 0.00 6.46
149 150 3.702555 CTTGCCTATACGCGCCGC 61.703 66.667 5.73 0.00 0.00 6.53
176 177 1.118033 CGCGGCCGCTTATATATACG 58.882 55.000 43.60 22.92 39.32 3.06
177 178 1.268184 CGCGGCCGCTTATATATACGA 60.268 52.381 43.60 0.00 39.32 3.43
178 179 2.114825 GCGGCCGCTTATATATACGAC 58.885 52.381 41.71 8.51 38.26 4.34
179 180 2.369600 CGGCCGCTTATATATACGACG 58.630 52.381 14.67 0.00 0.00 5.12
180 181 2.114825 GGCCGCTTATATATACGACGC 58.885 52.381 0.00 1.14 0.00 5.19
181 182 2.223433 GGCCGCTTATATATACGACGCT 60.223 50.000 0.00 0.00 0.00 5.07
182 183 3.034562 GCCGCTTATATATACGACGCTC 58.965 50.000 0.00 0.00 0.00 5.03
183 184 3.278303 CCGCTTATATATACGACGCTCG 58.722 50.000 0.00 5.97 46.93 5.03
196 197 4.771356 GCTCGTGCACGCGTCCTA 62.771 66.667 33.63 14.98 39.60 2.94
197 198 2.577112 CTCGTGCACGCGTCCTAG 60.577 66.667 33.63 20.52 39.60 3.02
198 199 3.324099 CTCGTGCACGCGTCCTAGT 62.324 63.158 33.63 0.00 39.60 2.57
199 200 3.172575 CGTGCACGCGTCCTAGTG 61.173 66.667 28.16 0.00 41.01 2.74
203 204 3.172575 CACGCGTCCTAGTGCACG 61.173 66.667 9.86 0.00 39.09 5.34
204 205 4.415332 ACGCGTCCTAGTGCACGG 62.415 66.667 5.58 7.90 36.50 4.94
208 209 4.065281 GTCCTAGTGCACGGGCGT 62.065 66.667 21.66 0.00 45.35 5.68
209 210 3.307906 TCCTAGTGCACGGGCGTT 61.308 61.111 21.66 0.00 45.35 4.84
210 211 2.813908 CCTAGTGCACGGGCGTTC 60.814 66.667 12.01 0.00 45.35 3.95
211 212 2.813908 CTAGTGCACGGGCGTTCC 60.814 66.667 12.01 0.00 45.35 3.62
212 213 3.296709 CTAGTGCACGGGCGTTCCT 62.297 63.158 12.01 0.00 45.35 3.36
213 214 3.291101 TAGTGCACGGGCGTTCCTC 62.291 63.158 12.01 0.00 45.35 3.71
214 215 4.980805 GTGCACGGGCGTTCCTCA 62.981 66.667 4.58 0.00 45.35 3.86
215 216 4.015406 TGCACGGGCGTTCCTCAT 62.015 61.111 4.58 0.00 45.35 2.90
216 217 2.746277 GCACGGGCGTTCCTCATT 60.746 61.111 0.00 0.00 0.00 2.57
217 218 2.750888 GCACGGGCGTTCCTCATTC 61.751 63.158 0.00 0.00 0.00 2.67
218 219 1.375396 CACGGGCGTTCCTCATTCA 60.375 57.895 0.00 0.00 0.00 2.57
219 220 1.375523 ACGGGCGTTCCTCATTCAC 60.376 57.895 0.00 0.00 0.00 3.18
220 221 1.079127 CGGGCGTTCCTCATTCACT 60.079 57.895 0.00 0.00 0.00 3.41
221 222 1.361668 CGGGCGTTCCTCATTCACTG 61.362 60.000 0.00 0.00 0.00 3.66
222 223 0.036388 GGGCGTTCCTCATTCACTGA 60.036 55.000 0.00 0.00 0.00 3.41
223 224 1.407437 GGGCGTTCCTCATTCACTGAT 60.407 52.381 0.00 0.00 32.10 2.90
224 225 2.359900 GGCGTTCCTCATTCACTGATT 58.640 47.619 0.00 0.00 32.10 2.57
225 226 2.096496 GGCGTTCCTCATTCACTGATTG 59.904 50.000 0.00 0.00 32.10 2.67
226 227 3.002791 GCGTTCCTCATTCACTGATTGA 58.997 45.455 4.07 4.07 32.10 2.57
227 228 3.181516 GCGTTCCTCATTCACTGATTGAC 60.182 47.826 0.35 0.00 32.26 3.18
228 229 3.372206 CGTTCCTCATTCACTGATTGACC 59.628 47.826 0.35 0.00 32.26 4.02
229 230 4.326826 GTTCCTCATTCACTGATTGACCA 58.673 43.478 0.35 0.00 32.26 4.02
230 231 3.942829 TCCTCATTCACTGATTGACCAC 58.057 45.455 0.35 0.00 32.26 4.16
231 232 3.327464 TCCTCATTCACTGATTGACCACA 59.673 43.478 0.35 0.00 32.26 4.17
232 233 3.438087 CCTCATTCACTGATTGACCACAC 59.562 47.826 0.35 0.00 32.26 3.82
233 234 4.067192 CTCATTCACTGATTGACCACACA 58.933 43.478 0.35 0.00 32.26 3.72
234 235 3.814842 TCATTCACTGATTGACCACACAC 59.185 43.478 0.35 0.00 32.26 3.82
235 236 2.254546 TCACTGATTGACCACACACC 57.745 50.000 0.00 0.00 0.00 4.16
236 237 0.867746 CACTGATTGACCACACACCG 59.132 55.000 0.00 0.00 0.00 4.94
237 238 0.468226 ACTGATTGACCACACACCGT 59.532 50.000 0.00 0.00 0.00 4.83
238 239 1.148310 CTGATTGACCACACACCGTC 58.852 55.000 0.00 0.00 0.00 4.79
239 240 0.250124 TGATTGACCACACACCGTCC 60.250 55.000 0.00 0.00 0.00 4.79
240 241 0.034896 GATTGACCACACACCGTCCT 59.965 55.000 0.00 0.00 0.00 3.85
241 242 0.034896 ATTGACCACACACCGTCCTC 59.965 55.000 0.00 0.00 0.00 3.71
242 243 1.331399 TTGACCACACACCGTCCTCA 61.331 55.000 0.00 0.00 0.00 3.86
243 244 1.006102 GACCACACACCGTCCTCAG 60.006 63.158 0.00 0.00 0.00 3.35
244 245 1.745320 GACCACACACCGTCCTCAGT 61.745 60.000 0.00 0.00 0.00 3.41
245 246 1.335132 ACCACACACCGTCCTCAGTT 61.335 55.000 0.00 0.00 0.00 3.16
246 247 0.179056 CCACACACCGTCCTCAGTTT 60.179 55.000 0.00 0.00 0.00 2.66
247 248 0.937304 CACACACCGTCCTCAGTTTG 59.063 55.000 0.00 0.00 0.00 2.93
248 249 0.539986 ACACACCGTCCTCAGTTTGT 59.460 50.000 0.00 0.00 0.00 2.83
249 250 1.217882 CACACCGTCCTCAGTTTGTC 58.782 55.000 0.00 0.00 0.00 3.18
250 251 1.120530 ACACCGTCCTCAGTTTGTCT 58.879 50.000 0.00 0.00 0.00 3.41
251 252 1.068741 ACACCGTCCTCAGTTTGTCTC 59.931 52.381 0.00 0.00 0.00 3.36
252 253 1.341531 CACCGTCCTCAGTTTGTCTCT 59.658 52.381 0.00 0.00 0.00 3.10
253 254 1.614413 ACCGTCCTCAGTTTGTCTCTC 59.386 52.381 0.00 0.00 0.00 3.20
254 255 1.613925 CCGTCCTCAGTTTGTCTCTCA 59.386 52.381 0.00 0.00 0.00 3.27
255 256 2.608261 CCGTCCTCAGTTTGTCTCTCAC 60.608 54.545 0.00 0.00 0.00 3.51
256 257 2.034685 CGTCCTCAGTTTGTCTCTCACA 59.965 50.000 0.00 0.00 0.00 3.58
257 258 3.648009 GTCCTCAGTTTGTCTCTCACAG 58.352 50.000 0.00 0.00 35.97 3.66
258 259 2.036475 TCCTCAGTTTGTCTCTCACAGC 59.964 50.000 0.00 0.00 35.97 4.40
259 260 2.411904 CTCAGTTTGTCTCTCACAGCC 58.588 52.381 0.00 0.00 35.97 4.85
260 261 1.762370 TCAGTTTGTCTCTCACAGCCA 59.238 47.619 0.00 0.00 35.97 4.75
261 262 2.141517 CAGTTTGTCTCTCACAGCCAG 58.858 52.381 0.00 0.00 35.97 4.85
262 263 2.042464 AGTTTGTCTCTCACAGCCAGA 58.958 47.619 0.00 0.00 35.97 3.86
263 264 2.036992 AGTTTGTCTCTCACAGCCAGAG 59.963 50.000 0.00 0.00 39.11 3.35
264 265 0.319728 TTGTCTCTCACAGCCAGAGC 59.680 55.000 0.00 0.00 37.84 4.09
265 266 1.217779 GTCTCTCACAGCCAGAGCC 59.782 63.158 0.00 0.00 41.25 4.70
266 267 1.228988 TCTCTCACAGCCAGAGCCA 60.229 57.895 0.00 0.00 41.25 4.75
267 268 1.079266 CTCTCACAGCCAGAGCCAC 60.079 63.158 0.00 0.00 41.25 5.01
268 269 1.824224 CTCTCACAGCCAGAGCCACA 61.824 60.000 0.00 0.00 41.25 4.17
269 270 1.670406 CTCACAGCCAGAGCCACAC 60.670 63.158 0.00 0.00 41.25 3.82
270 271 2.111669 CACAGCCAGAGCCACACA 59.888 61.111 0.00 0.00 41.25 3.72
271 272 1.303074 CACAGCCAGAGCCACACAT 60.303 57.895 0.00 0.00 41.25 3.21
272 273 1.002868 ACAGCCAGAGCCACACATC 60.003 57.895 0.00 0.00 41.25 3.06
273 274 1.002990 CAGCCAGAGCCACACATCA 60.003 57.895 0.00 0.00 41.25 3.07
274 275 1.025113 CAGCCAGAGCCACACATCAG 61.025 60.000 0.00 0.00 41.25 2.90
275 276 2.404995 GCCAGAGCCACACATCAGC 61.405 63.158 0.00 0.00 0.00 4.26
276 277 1.748122 CCAGAGCCACACATCAGCC 60.748 63.158 0.00 0.00 0.00 4.85
277 278 1.002990 CAGAGCCACACATCAGCCA 60.003 57.895 0.00 0.00 0.00 4.75
278 279 1.002868 AGAGCCACACATCAGCCAC 60.003 57.895 0.00 0.00 0.00 5.01
279 280 2.034687 AGCCACACATCAGCCACC 59.965 61.111 0.00 0.00 0.00 4.61
280 281 3.064324 GCCACACATCAGCCACCC 61.064 66.667 0.00 0.00 0.00 4.61
281 282 2.361610 CCACACATCAGCCACCCC 60.362 66.667 0.00 0.00 0.00 4.95
282 283 2.747460 CACACATCAGCCACCCCG 60.747 66.667 0.00 0.00 0.00 5.73
283 284 4.722700 ACACATCAGCCACCCCGC 62.723 66.667 0.00 0.00 0.00 6.13
327 328 2.203379 CCATGGCGGCCATCATCA 60.203 61.111 30.92 3.93 43.15 3.07
328 329 2.558286 CCATGGCGGCCATCATCAC 61.558 63.158 30.92 0.00 43.15 3.06
329 330 2.203394 ATGGCGGCCATCATCACC 60.203 61.111 28.37 0.00 40.74 4.02
330 331 2.760378 ATGGCGGCCATCATCACCT 61.760 57.895 28.37 5.06 40.74 4.00
331 332 2.592861 GGCGGCCATCATCACCTC 60.593 66.667 15.62 0.00 0.00 3.85
332 333 2.969238 GCGGCCATCATCACCTCG 60.969 66.667 2.24 0.00 0.00 4.63
333 334 2.280389 CGGCCATCATCACCTCGG 60.280 66.667 2.24 0.00 0.00 4.63
334 335 2.592861 GGCCATCATCACCTCGGC 60.593 66.667 0.00 0.00 42.21 5.54
335 336 2.969238 GCCATCATCACCTCGGCG 60.969 66.667 0.00 0.00 32.14 6.46
336 337 2.280389 CCATCATCACCTCGGCGG 60.280 66.667 7.21 0.00 39.35 6.13
337 338 2.280389 CATCATCACCTCGGCGGG 60.280 66.667 7.21 1.99 36.97 6.13
338 339 3.550431 ATCATCACCTCGGCGGGG 61.550 66.667 27.26 27.26 37.63 5.73
358 359 3.188786 GGTGTTGAGCCGCGCTAG 61.189 66.667 5.56 0.00 39.88 3.42
359 360 3.854459 GTGTTGAGCCGCGCTAGC 61.854 66.667 5.56 8.74 39.88 3.42
371 372 4.600576 GCTAGCGGGCTCCAGCTC 62.601 72.222 16.48 0.00 43.44 4.09
372 373 3.922640 CTAGCGGGCTCCAGCTCC 61.923 72.222 16.48 0.73 43.44 4.70
373 374 4.465446 TAGCGGGCTCCAGCTCCT 62.465 66.667 16.48 0.08 43.44 3.69
377 378 3.160748 GGGCTCCAGCTCCTCCTC 61.161 72.222 0.00 0.00 41.70 3.71
378 379 3.535962 GGCTCCAGCTCCTCCTCG 61.536 72.222 0.00 0.00 41.70 4.63
379 380 2.757917 GCTCCAGCTCCTCCTCGT 60.758 66.667 0.00 0.00 38.21 4.18
380 381 3.074999 GCTCCAGCTCCTCCTCGTG 62.075 68.421 0.00 0.00 38.21 4.35
381 382 3.071206 TCCAGCTCCTCCTCGTGC 61.071 66.667 0.00 0.00 0.00 5.34
382 383 3.073735 CCAGCTCCTCCTCGTGCT 61.074 66.667 0.00 0.00 36.04 4.40
383 384 2.183811 CAGCTCCTCCTCGTGCTG 59.816 66.667 0.00 0.00 45.15 4.41
384 385 3.768922 AGCTCCTCCTCGTGCTGC 61.769 66.667 0.00 0.00 34.19 5.25
385 386 3.768922 GCTCCTCCTCGTGCTGCT 61.769 66.667 0.00 0.00 0.00 4.24
386 387 2.493973 CTCCTCCTCGTGCTGCTC 59.506 66.667 0.00 0.00 0.00 4.26
387 388 3.408501 CTCCTCCTCGTGCTGCTCG 62.409 68.421 17.08 17.08 0.00 5.03
409 410 4.969196 CACCTCGCACGGTGCTGT 62.969 66.667 28.42 19.67 46.98 4.40
410 411 4.969196 ACCTCGCACGGTGCTGTG 62.969 66.667 28.42 20.71 42.25 3.66
423 424 3.957586 CTGTGCCAGGGGTGCAGA 61.958 66.667 0.00 0.00 39.87 4.26
424 425 4.269523 TGTGCCAGGGGTGCAGAC 62.270 66.667 0.00 0.00 39.87 3.51
425 426 4.269523 GTGCCAGGGGTGCAGACA 62.270 66.667 0.00 0.00 39.87 3.41
426 427 3.957586 TGCCAGGGGTGCAGACAG 61.958 66.667 0.00 0.00 34.05 3.51
427 428 4.729918 GCCAGGGGTGCAGACAGG 62.730 72.222 0.00 0.00 0.00 4.00
428 429 4.729918 CCAGGGGTGCAGACAGGC 62.730 72.222 0.00 0.00 0.00 4.85
429 430 3.957586 CAGGGGTGCAGACAGGCA 61.958 66.667 0.00 0.00 42.53 4.75
444 445 2.125512 GCACTGCCACCTAGTCGG 60.126 66.667 0.00 0.00 39.35 4.79
445 446 2.579201 CACTGCCACCTAGTCGGG 59.421 66.667 0.00 0.00 36.97 5.14
446 447 2.683933 ACTGCCACCTAGTCGGGG 60.684 66.667 0.00 0.00 36.97 5.73
447 448 4.162690 CTGCCACCTAGTCGGGGC 62.163 72.222 5.37 5.37 44.70 5.80
450 451 3.782443 CCACCTAGTCGGGGCCAC 61.782 72.222 4.39 0.00 33.53 5.01
451 452 3.782443 CACCTAGTCGGGGCCACC 61.782 72.222 4.39 1.95 36.97 4.61
467 468 4.524318 CCGGACAGCGCCCGTTAT 62.524 66.667 19.84 0.00 45.14 1.89
468 469 3.261951 CGGACAGCGCCCGTTATG 61.262 66.667 14.47 2.99 41.91 1.90
469 470 2.185867 GGACAGCGCCCGTTATGA 59.814 61.111 2.29 0.00 0.00 2.15
470 471 2.171725 GGACAGCGCCCGTTATGAC 61.172 63.158 2.29 0.00 0.00 3.06
471 472 1.153628 GACAGCGCCCGTTATGACT 60.154 57.895 2.29 0.00 0.00 3.41
472 473 1.421410 GACAGCGCCCGTTATGACTG 61.421 60.000 2.29 0.00 0.00 3.51
473 474 1.447838 CAGCGCCCGTTATGACTGT 60.448 57.895 2.29 0.00 0.00 3.55
474 475 1.447838 AGCGCCCGTTATGACTGTG 60.448 57.895 2.29 0.00 0.00 3.66
475 476 1.447140 GCGCCCGTTATGACTGTGA 60.447 57.895 0.00 0.00 0.00 3.58
476 477 1.421410 GCGCCCGTTATGACTGTGAG 61.421 60.000 0.00 0.00 0.00 3.51
477 478 0.108804 CGCCCGTTATGACTGTGAGT 60.109 55.000 0.00 0.00 0.00 3.41
478 479 1.671850 CGCCCGTTATGACTGTGAGTT 60.672 52.381 0.00 0.00 0.00 3.01
479 480 2.000447 GCCCGTTATGACTGTGAGTTC 59.000 52.381 0.00 0.00 0.00 3.01
480 481 2.618053 CCCGTTATGACTGTGAGTTCC 58.382 52.381 0.00 0.00 0.00 3.62
481 482 2.028476 CCCGTTATGACTGTGAGTTCCA 60.028 50.000 0.00 0.00 0.00 3.53
482 483 3.369471 CCCGTTATGACTGTGAGTTCCAT 60.369 47.826 0.00 0.00 0.00 3.41
483 484 3.865745 CCGTTATGACTGTGAGTTCCATC 59.134 47.826 0.00 0.00 0.00 3.51
484 485 4.494484 CGTTATGACTGTGAGTTCCATCA 58.506 43.478 0.00 0.00 0.00 3.07
485 486 5.111989 CGTTATGACTGTGAGTTCCATCAT 58.888 41.667 0.00 0.00 0.00 2.45
486 487 5.233050 CGTTATGACTGTGAGTTCCATCATC 59.767 44.000 0.00 0.00 0.00 2.92
487 488 4.831674 ATGACTGTGAGTTCCATCATCA 57.168 40.909 0.00 0.00 0.00 3.07
488 489 4.831674 TGACTGTGAGTTCCATCATCAT 57.168 40.909 0.00 0.00 0.00 2.45
489 490 5.937975 TGACTGTGAGTTCCATCATCATA 57.062 39.130 0.00 0.00 0.00 2.15
490 491 6.490241 TGACTGTGAGTTCCATCATCATAT 57.510 37.500 0.00 0.00 0.00 1.78
491 492 7.601705 TGACTGTGAGTTCCATCATCATATA 57.398 36.000 0.00 0.00 0.00 0.86
492 493 8.198807 TGACTGTGAGTTCCATCATCATATAT 57.801 34.615 0.00 0.00 0.00 0.86
493 494 8.309656 TGACTGTGAGTTCCATCATCATATATC 58.690 37.037 0.00 0.00 0.00 1.63
494 495 8.198807 ACTGTGAGTTCCATCATCATATATCA 57.801 34.615 0.00 0.00 0.00 2.15
495 496 8.823794 ACTGTGAGTTCCATCATCATATATCAT 58.176 33.333 0.00 0.00 0.00 2.45
509 510 9.415544 CATCATATATCATATACACCATCACCG 57.584 37.037 0.00 0.00 0.00 4.94
510 511 8.533569 TCATATATCATATACACCATCACCGT 57.466 34.615 0.00 0.00 0.00 4.83
511 512 9.635404 TCATATATCATATACACCATCACCGTA 57.365 33.333 0.00 0.00 0.00 4.02
512 513 9.678941 CATATATCATATACACCATCACCGTAC 57.321 37.037 0.00 0.00 0.00 3.67
513 514 4.859304 TCATATACACCATCACCGTACC 57.141 45.455 0.00 0.00 0.00 3.34
514 515 4.216708 TCATATACACCATCACCGTACCA 58.783 43.478 0.00 0.00 0.00 3.25
515 516 2.973694 ATACACCATCACCGTACCAC 57.026 50.000 0.00 0.00 0.00 4.16
516 517 1.927487 TACACCATCACCGTACCACT 58.073 50.000 0.00 0.00 0.00 4.00
517 518 1.927487 ACACCATCACCGTACCACTA 58.073 50.000 0.00 0.00 0.00 2.74
518 519 1.547372 ACACCATCACCGTACCACTAC 59.453 52.381 0.00 0.00 0.00 2.73
519 520 1.546923 CACCATCACCGTACCACTACA 59.453 52.381 0.00 0.00 0.00 2.74
520 521 1.822990 ACCATCACCGTACCACTACAG 59.177 52.381 0.00 0.00 0.00 2.74
521 522 2.097036 CCATCACCGTACCACTACAGA 58.903 52.381 0.00 0.00 0.00 3.41
522 523 2.693591 CCATCACCGTACCACTACAGAT 59.306 50.000 0.00 0.00 0.00 2.90
523 524 3.243434 CCATCACCGTACCACTACAGATC 60.243 52.174 0.00 0.00 0.00 2.75
524 525 3.076079 TCACCGTACCACTACAGATCA 57.924 47.619 0.00 0.00 0.00 2.92
525 526 3.423749 TCACCGTACCACTACAGATCAA 58.576 45.455 0.00 0.00 0.00 2.57
526 527 4.021229 TCACCGTACCACTACAGATCAAT 58.979 43.478 0.00 0.00 0.00 2.57
527 528 5.195185 TCACCGTACCACTACAGATCAATA 58.805 41.667 0.00 0.00 0.00 1.90
528 529 5.066893 TCACCGTACCACTACAGATCAATAC 59.933 44.000 0.00 0.00 0.00 1.89
529 530 4.036027 ACCGTACCACTACAGATCAATACG 59.964 45.833 0.00 0.00 35.21 3.06
530 531 4.036027 CCGTACCACTACAGATCAATACGT 59.964 45.833 0.00 0.00 33.97 3.57
531 532 5.237127 CCGTACCACTACAGATCAATACGTA 59.763 44.000 0.00 0.00 33.97 3.57
532 533 6.132056 CGTACCACTACAGATCAATACGTAC 58.868 44.000 0.00 0.00 31.83 3.67
533 534 6.018425 CGTACCACTACAGATCAATACGTACT 60.018 42.308 0.00 0.00 31.83 2.73
534 535 6.132791 ACCACTACAGATCAATACGTACTG 57.867 41.667 0.00 0.00 35.14 2.74
535 536 5.651139 ACCACTACAGATCAATACGTACTGT 59.349 40.000 16.88 16.88 42.94 3.55
536 537 6.152323 ACCACTACAGATCAATACGTACTGTT 59.848 38.462 17.63 4.38 41.17 3.16
537 538 6.472486 CCACTACAGATCAATACGTACTGTTG 59.528 42.308 17.63 17.31 41.17 3.33
538 539 6.472486 CACTACAGATCAATACGTACTGTTGG 59.528 42.308 17.63 13.83 41.17 3.77
539 540 5.401531 ACAGATCAATACGTACTGTTGGT 57.598 39.130 9.33 1.93 38.41 3.67
540 541 6.519679 ACAGATCAATACGTACTGTTGGTA 57.480 37.500 9.33 0.00 38.41 3.25
541 542 6.561614 ACAGATCAATACGTACTGTTGGTAG 58.438 40.000 9.33 1.98 38.41 3.18
542 543 5.459107 CAGATCAATACGTACTGTTGGTAGC 59.541 44.000 3.69 0.00 0.00 3.58
543 544 3.761657 TCAATACGTACTGTTGGTAGCG 58.238 45.455 3.69 0.00 34.04 4.26
544 545 2.199291 ATACGTACTGTTGGTAGCGC 57.801 50.000 0.00 0.00 32.44 5.92
545 546 0.179192 TACGTACTGTTGGTAGCGCG 60.179 55.000 0.00 0.00 32.44 6.86
546 547 1.443194 CGTACTGTTGGTAGCGCGT 60.443 57.895 8.43 0.00 0.00 6.01
547 548 1.400990 CGTACTGTTGGTAGCGCGTC 61.401 60.000 8.43 0.00 0.00 5.19
548 549 0.387622 GTACTGTTGGTAGCGCGTCA 60.388 55.000 8.43 0.00 0.00 4.35
549 550 0.387622 TACTGTTGGTAGCGCGTCAC 60.388 55.000 8.43 5.76 0.00 3.67
551 552 2.732094 GTTGGTAGCGCGTCACGT 60.732 61.111 8.43 0.00 46.11 4.49
552 553 1.442520 GTTGGTAGCGCGTCACGTA 60.443 57.895 8.43 0.00 46.11 3.57
553 554 1.442520 TTGGTAGCGCGTCACGTAC 60.443 57.895 8.43 0.00 46.11 3.67
554 555 1.855213 TTGGTAGCGCGTCACGTACT 61.855 55.000 8.43 0.00 46.11 2.73
555 556 1.018752 TGGTAGCGCGTCACGTACTA 61.019 55.000 8.43 0.00 46.11 1.82
556 557 0.305922 GGTAGCGCGTCACGTACTAT 59.694 55.000 8.43 0.00 46.11 2.12
557 558 1.526887 GGTAGCGCGTCACGTACTATA 59.473 52.381 8.43 0.00 46.11 1.31
558 559 2.158449 GGTAGCGCGTCACGTACTATAT 59.842 50.000 8.43 0.00 46.11 0.86
559 560 2.311450 AGCGCGTCACGTACTATATG 57.689 50.000 8.43 0.00 46.11 1.78
560 561 1.069432 AGCGCGTCACGTACTATATGG 60.069 52.381 8.43 0.00 46.11 2.74
561 562 1.334419 GCGCGTCACGTACTATATGGT 60.334 52.381 8.43 0.00 46.11 3.55
562 563 2.304413 CGCGTCACGTACTATATGGTG 58.696 52.381 0.00 0.00 36.87 4.17
563 564 2.658285 GCGTCACGTACTATATGGTGG 58.342 52.381 0.00 0.00 0.00 4.61
564 565 2.658285 CGTCACGTACTATATGGTGGC 58.342 52.381 1.31 0.00 0.00 5.01
565 566 2.292569 CGTCACGTACTATATGGTGGCT 59.707 50.000 1.31 0.00 33.07 4.75
566 567 3.499537 CGTCACGTACTATATGGTGGCTA 59.500 47.826 1.31 0.00 33.07 3.93
567 568 4.378149 CGTCACGTACTATATGGTGGCTAG 60.378 50.000 1.31 0.00 33.07 3.42
568 569 4.077108 TCACGTACTATATGGTGGCTAGG 58.923 47.826 1.31 0.00 0.00 3.02
569 570 4.077108 CACGTACTATATGGTGGCTAGGA 58.923 47.826 1.31 0.00 0.00 2.94
570 571 4.705507 CACGTACTATATGGTGGCTAGGAT 59.294 45.833 1.31 0.00 0.00 3.24
571 572 4.948621 ACGTACTATATGGTGGCTAGGATC 59.051 45.833 1.31 0.00 0.00 3.36
572 573 5.194432 CGTACTATATGGTGGCTAGGATCT 58.806 45.833 1.31 0.00 0.00 2.75
573 574 5.297278 CGTACTATATGGTGGCTAGGATCTC 59.703 48.000 1.31 0.00 0.00 2.75
574 575 5.544441 ACTATATGGTGGCTAGGATCTCT 57.456 43.478 0.00 0.00 0.00 3.10
575 576 5.515106 ACTATATGGTGGCTAGGATCTCTC 58.485 45.833 0.00 0.00 0.00 3.20
576 577 2.783379 ATGGTGGCTAGGATCTCTCA 57.217 50.000 0.00 0.00 0.00 3.27
577 578 2.550277 TGGTGGCTAGGATCTCTCAA 57.450 50.000 0.00 0.00 0.00 3.02
578 579 2.392662 TGGTGGCTAGGATCTCTCAAG 58.607 52.381 0.00 0.00 0.00 3.02
579 580 2.292521 TGGTGGCTAGGATCTCTCAAGT 60.293 50.000 0.00 0.00 0.00 3.16
580 581 3.052869 TGGTGGCTAGGATCTCTCAAGTA 60.053 47.826 0.00 0.00 0.00 2.24
581 582 3.961408 GGTGGCTAGGATCTCTCAAGTAA 59.039 47.826 0.00 0.00 0.00 2.24
582 583 4.406003 GGTGGCTAGGATCTCTCAAGTAAA 59.594 45.833 0.00 0.00 0.00 2.01
583 584 5.071115 GGTGGCTAGGATCTCTCAAGTAAAT 59.929 44.000 0.00 0.00 0.00 1.40
584 585 6.220201 GTGGCTAGGATCTCTCAAGTAAATC 58.780 44.000 0.00 0.00 0.00 2.17
585 586 5.899547 TGGCTAGGATCTCTCAAGTAAATCA 59.100 40.000 0.00 0.00 0.00 2.57
586 587 6.183360 TGGCTAGGATCTCTCAAGTAAATCAC 60.183 42.308 0.00 0.00 0.00 3.06
587 588 6.183360 GGCTAGGATCTCTCAAGTAAATCACA 60.183 42.308 0.00 0.00 0.00 3.58
588 589 7.441017 GCTAGGATCTCTCAAGTAAATCACAT 58.559 38.462 0.00 0.00 0.00 3.21
589 590 7.598493 GCTAGGATCTCTCAAGTAAATCACATC 59.402 40.741 0.00 0.00 0.00 3.06
590 591 7.673641 AGGATCTCTCAAGTAAATCACATCT 57.326 36.000 0.00 0.00 0.00 2.90
591 592 7.499292 AGGATCTCTCAAGTAAATCACATCTG 58.501 38.462 0.00 0.00 0.00 2.90
592 593 7.344093 AGGATCTCTCAAGTAAATCACATCTGA 59.656 37.037 0.00 0.00 0.00 3.27
593 594 7.984050 GGATCTCTCAAGTAAATCACATCTGAA 59.016 37.037 0.00 0.00 0.00 3.02
594 595 9.376075 GATCTCTCAAGTAAATCACATCTGAAA 57.624 33.333 0.00 0.00 0.00 2.69
595 596 9.902684 ATCTCTCAAGTAAATCACATCTGAAAT 57.097 29.630 0.00 0.00 0.00 2.17
596 597 9.730705 TCTCTCAAGTAAATCACATCTGAAATT 57.269 29.630 0.00 0.00 0.00 1.82
603 604 8.897752 AGTAAATCACATCTGAAATTTAGAGGC 58.102 33.333 0.00 0.00 29.55 4.70
604 605 7.707624 AAATCACATCTGAAATTTAGAGGCA 57.292 32.000 0.00 0.00 29.55 4.75
605 606 7.707624 AATCACATCTGAAATTTAGAGGCAA 57.292 32.000 0.00 0.00 29.55 4.52
606 607 7.707624 ATCACATCTGAAATTTAGAGGCAAA 57.292 32.000 0.00 0.00 29.55 3.68
607 608 7.523293 TCACATCTGAAATTTAGAGGCAAAA 57.477 32.000 0.00 0.00 29.55 2.44
608 609 8.125978 TCACATCTGAAATTTAGAGGCAAAAT 57.874 30.769 0.00 0.00 29.55 1.82
609 610 8.587608 TCACATCTGAAATTTAGAGGCAAAATT 58.412 29.630 0.00 0.00 37.98 1.82
610 611 8.653338 CACATCTGAAATTTAGAGGCAAAATTG 58.347 33.333 0.00 0.00 36.81 2.32
611 612 7.820872 ACATCTGAAATTTAGAGGCAAAATTGG 59.179 33.333 0.00 2.41 36.81 3.16
612 613 7.301868 TCTGAAATTTAGAGGCAAAATTGGT 57.698 32.000 0.00 0.00 36.81 3.67
613 614 7.153985 TCTGAAATTTAGAGGCAAAATTGGTG 58.846 34.615 0.00 0.00 36.81 4.17
614 615 6.825610 TGAAATTTAGAGGCAAAATTGGTGT 58.174 32.000 0.00 0.00 36.81 4.16
615 616 6.928492 TGAAATTTAGAGGCAAAATTGGTGTC 59.072 34.615 0.00 2.53 36.81 3.67
616 617 6.670695 AATTTAGAGGCAAAATTGGTGTCT 57.329 33.333 0.00 0.00 35.69 3.41
617 618 7.775053 AATTTAGAGGCAAAATTGGTGTCTA 57.225 32.000 0.00 0.00 35.69 2.59
618 619 6.817765 TTTAGAGGCAAAATTGGTGTCTAG 57.182 37.500 0.00 0.00 28.99 2.43
619 620 3.690460 AGAGGCAAAATTGGTGTCTAGG 58.310 45.455 0.00 0.00 28.99 3.02
620 621 3.330701 AGAGGCAAAATTGGTGTCTAGGA 59.669 43.478 0.00 0.00 28.99 2.94
621 622 4.018050 AGAGGCAAAATTGGTGTCTAGGAT 60.018 41.667 0.00 0.00 28.99 3.24
622 623 4.273318 AGGCAAAATTGGTGTCTAGGATC 58.727 43.478 0.00 0.00 0.00 3.36
623 624 4.018050 AGGCAAAATTGGTGTCTAGGATCT 60.018 41.667 0.00 0.00 0.00 2.75
624 625 4.336713 GGCAAAATTGGTGTCTAGGATCTC 59.663 45.833 0.00 0.00 0.00 2.75
625 626 5.189180 GCAAAATTGGTGTCTAGGATCTCT 58.811 41.667 0.00 0.00 0.00 3.10
626 627 5.295540 GCAAAATTGGTGTCTAGGATCTCTC 59.704 44.000 0.00 0.00 0.00 3.20
627 628 6.409704 CAAAATTGGTGTCTAGGATCTCTCA 58.590 40.000 0.00 0.00 0.00 3.27
628 629 6.627087 AAATTGGTGTCTAGGATCTCTCAA 57.373 37.500 0.00 0.00 0.00 3.02
629 630 5.867903 ATTGGTGTCTAGGATCTCTCAAG 57.132 43.478 0.00 0.00 0.00 3.02
630 631 4.592997 TGGTGTCTAGGATCTCTCAAGA 57.407 45.455 0.00 0.00 35.54 3.02
631 632 4.531854 TGGTGTCTAGGATCTCTCAAGAG 58.468 47.826 0.33 0.33 43.36 2.85
646 647 6.509418 TCTCAAGAGAGCTAGACTTTCTTC 57.491 41.667 13.42 1.58 44.39 2.87
647 648 6.245408 TCTCAAGAGAGCTAGACTTTCTTCT 58.755 40.000 13.42 3.19 44.39 2.85
648 649 7.398829 TCTCAAGAGAGCTAGACTTTCTTCTA 58.601 38.462 13.42 7.40 44.39 2.10
649 650 7.552687 TCTCAAGAGAGCTAGACTTTCTTCTAG 59.447 40.741 13.42 13.33 44.39 2.43
714 715 7.756722 AGTGAAAGCATTTTCCTCGATTTATTG 59.243 33.333 0.00 0.00 39.27 1.90
732 734 6.529463 TTATTGAGATGATGCATGTGTACG 57.471 37.500 2.46 0.00 0.00 3.67
749 761 4.552660 GTGTACGAGCGTTTAAGTCTGTAG 59.447 45.833 0.00 0.00 0.00 2.74
759 771 5.626543 CGTTTAAGTCTGTAGCGTGTTTCTA 59.373 40.000 0.00 0.00 0.00 2.10
768 780 6.018507 TCTGTAGCGTGTTTCTAAGGAAAAAC 60.019 38.462 2.68 2.68 42.94 2.43
795 807 6.709846 GTCCATTGTCCAAAATTTCAAATCCA 59.290 34.615 0.00 0.00 0.00 3.41
801 813 7.209475 TGTCCAAAATTTCAAATCCAGTCTTC 58.791 34.615 0.00 0.00 0.00 2.87
875 887 3.669939 AGAATTCCAATTCCATCGGGT 57.330 42.857 0.65 0.00 44.55 5.28
880 892 2.722094 TCCAATTCCATCGGGTGAAAG 58.278 47.619 0.00 0.00 34.93 2.62
882 894 3.088532 CCAATTCCATCGGGTGAAAGAA 58.911 45.455 0.00 0.00 34.93 2.52
918 944 4.122143 TGCAAACAAAACTCTTTCCAGG 57.878 40.909 0.00 0.00 0.00 4.45
1095 1129 0.864659 AAGCCCAAACCCTAACCCTT 59.135 50.000 0.00 0.00 0.00 3.95
1106 1140 1.280421 CCTAACCCTTGCTTCAGCTCT 59.720 52.381 0.00 0.00 42.66 4.09
1210 1247 3.948719 GCCCTCGTGGTGGTGGAA 61.949 66.667 2.33 0.00 36.04 3.53
1324 1364 2.055299 GGACAAGGTCCGTTCCTCA 58.945 57.895 0.00 0.00 43.14 3.86
1328 1369 1.460689 AAGGTCCGTTCCTCACCCA 60.461 57.895 0.00 0.00 36.74 4.51
1337 1378 1.852157 TTCCTCACCCATGCCACTCC 61.852 60.000 0.00 0.00 0.00 3.85
1341 1382 2.607750 ACCCATGCCACTCCTCGT 60.608 61.111 0.00 0.00 0.00 4.18
1389 1430 1.006220 TCATCTGCGCTCGTGTTGT 60.006 52.632 9.73 0.00 0.00 3.32
1494 1535 6.765036 ACTTTGAGATGCGATGATGATTAGTT 59.235 34.615 0.00 0.00 0.00 2.24
1559 1600 1.109609 TGCAGTGGATTGTTGTTGCA 58.890 45.000 0.00 0.00 39.03 4.08
1561 1602 2.102757 TGCAGTGGATTGTTGTTGCAAT 59.897 40.909 0.59 0.00 41.28 3.56
1566 1607 2.877168 TGGATTGTTGTTGCAATTTGGC 59.123 40.909 0.59 0.00 38.98 4.52
1578 1619 4.712476 TGCAATTTGGCCAATACTTTTGT 58.288 34.783 21.26 0.00 0.00 2.83
1582 1623 5.760484 ATTTGGCCAATACTTTTGTCCAT 57.240 34.783 21.26 1.59 0.00 3.41
1601 1642 1.024271 TGCTTGAACTGCCACTTGTC 58.976 50.000 0.00 0.00 0.00 3.18
1623 1664 2.687610 CCTTCTGGATGGGGCAGCT 61.688 63.158 0.00 0.00 34.57 4.24
1641 1685 4.509600 GCAGCTTGTAGGATGTAATCTGAC 59.490 45.833 0.00 0.00 44.71 3.51
1665 1709 5.739752 TCAGTTGTGTTGATTGAGAGTTG 57.260 39.130 0.00 0.00 0.00 3.16
1668 1712 4.949856 AGTTGTGTTGATTGAGAGTTGGTT 59.050 37.500 0.00 0.00 0.00 3.67
1683 1727 0.894141 TGGTTGTGTGTTTGCTTGCT 59.106 45.000 0.00 0.00 0.00 3.91
1684 1728 2.095461 TGGTTGTGTGTTTGCTTGCTA 58.905 42.857 0.00 0.00 0.00 3.49
1685 1729 2.098934 TGGTTGTGTGTTTGCTTGCTAG 59.901 45.455 0.00 0.00 0.00 3.42
1686 1730 2.543653 GGTTGTGTGTTTGCTTGCTAGG 60.544 50.000 0.00 0.00 0.00 3.02
1687 1731 1.317613 TGTGTGTTTGCTTGCTAGGG 58.682 50.000 0.00 0.00 0.00 3.53
1688 1732 0.598065 GTGTGTTTGCTTGCTAGGGG 59.402 55.000 0.00 0.00 0.00 4.79
1689 1733 0.476338 TGTGTTTGCTTGCTAGGGGA 59.524 50.000 0.00 0.00 0.00 4.81
1690 1734 1.075374 TGTGTTTGCTTGCTAGGGGAT 59.925 47.619 0.00 0.00 0.00 3.85
1691 1735 2.171003 GTGTTTGCTTGCTAGGGGATT 58.829 47.619 0.00 0.00 0.00 3.01
1692 1736 2.094545 GTGTTTGCTTGCTAGGGGATTG 60.095 50.000 0.00 0.00 0.00 2.67
1699 1743 0.548031 TGCTAGGGGATTGCTCAAGG 59.452 55.000 0.00 0.00 0.00 3.61
1700 1744 0.548510 GCTAGGGGATTGCTCAAGGT 59.451 55.000 0.00 0.00 0.00 3.50
1704 1748 1.598701 GGGGATTGCTCAAGGTGTGC 61.599 60.000 0.00 0.00 37.38 4.57
1718 1762 5.366477 TCAAGGTGTGCCTAGAATCATGATA 59.634 40.000 9.04 0.00 46.33 2.15
1737 1781 8.892723 TCATGATAATAAGGTGAAACACATGAC 58.107 33.333 0.00 0.00 39.98 3.06
1805 1849 4.684485 GCACTACCTCATTCATGCCTAGTT 60.684 45.833 0.00 0.00 0.00 2.24
2000 2051 2.086610 AGAAGAAAAAGGGCAAGGCA 57.913 45.000 0.00 0.00 0.00 4.75
2047 2098 3.848975 AGGGATGAGAAATCACTGGACTT 59.151 43.478 0.00 0.00 29.18 3.01
2293 2344 0.464735 AGGCAAGTGCGTGGTGTTAA 60.465 50.000 0.00 0.00 43.26 2.01
2502 2553 8.436200 CAGTTTCAGTACTATGTAGTTTCTTGC 58.564 37.037 0.00 0.00 37.73 4.01
2575 2626 4.511454 TCAAGTTTGATTGAACACGGAGAG 59.489 41.667 0.00 0.00 36.28 3.20
2719 2770 5.348986 AGGGCTATATATACGTTTCATGCG 58.651 41.667 0.00 0.00 0.00 4.73
2870 2924 4.478206 TGTTTTGGATTGTTTGGCTTGA 57.522 36.364 0.00 0.00 0.00 3.02
2882 2936 5.923204 TGTTTGGCTTGACATAATTTTGGT 58.077 33.333 0.89 0.00 0.00 3.67
2961 3015 5.029650 TGTGTTCATTGTATGTTCTTCGC 57.970 39.130 0.00 0.00 0.00 4.70
3006 3060 7.500892 TCTGCAGGTGTAGTAAAATTTCAGAAA 59.499 33.333 15.13 0.00 0.00 2.52
3061 3115 4.655963 ACTTCTGTAAATGACCATGCTGT 58.344 39.130 0.00 0.00 0.00 4.40
3114 3169 2.290832 TGTCAGCCATGTGCAGGAATTA 60.291 45.455 8.58 0.00 44.83 1.40
3722 3777 5.239306 TGGTGCTTTCTAAGATTGTTGACAG 59.761 40.000 0.00 0.00 0.00 3.51
3767 3822 4.599041 TGGACCCAAATACTCAAGAATGG 58.401 43.478 0.00 0.00 0.00 3.16
3804 3859 1.377856 GCCAGGAAGCCCTTCACTC 60.378 63.158 9.95 0.00 42.02 3.51
4021 4076 2.705658 TGACACCTCAGTTGAATCCTGT 59.294 45.455 0.00 0.00 0.00 4.00
4085 4140 7.397892 TCAGTACTTTTTGATTGGTTTGTGA 57.602 32.000 0.00 0.00 0.00 3.58
4193 4373 6.205853 AGCAATTGTCGGTGTAGATTTTGTAA 59.794 34.615 7.40 0.00 0.00 2.41
4304 4486 6.642131 GTGTACGGTACTTACATGAAAGTGAA 59.358 38.462 18.32 0.00 44.62 3.18
4305 4487 7.169645 GTGTACGGTACTTACATGAAAGTGAAA 59.830 37.037 18.32 0.00 44.62 2.69
4326 4508 7.538678 GTGAAACTAAAGATATGCAGTTTGTGG 59.461 37.037 3.48 0.00 40.38 4.17
4330 4512 2.094675 AGATATGCAGTTTGTGGCACC 58.905 47.619 16.26 0.00 43.75 5.01
4343 4525 1.609555 GTGGCACCTATACTCGAGAGG 59.390 57.143 21.68 17.94 36.36 3.69
4464 4646 8.093927 CCCCAGACTATCTTGAAGAGATATTTC 58.906 40.741 0.00 0.00 44.35 2.17
4764 4946 0.886043 ATTGAGCTGTCGCAAGCACA 60.886 50.000 11.11 8.23 46.08 4.57
4846 5028 4.151798 GTGTCTGCGATGCTTAAGAAAAC 58.848 43.478 6.67 0.00 0.00 2.43
4971 5230 2.229784 GGTCAGGCTTCATTTGTCCTTG 59.770 50.000 0.00 0.00 0.00 3.61
5122 5381 2.416747 GCATGCCAGTATATGCTTCGA 58.583 47.619 6.36 0.00 44.70 3.71
5248 5508 0.302890 CGCATGCTTGTCTCGAATCC 59.697 55.000 17.13 0.00 0.00 3.01
5265 5525 1.691196 TCCAACTGTTTTGGCTCTGG 58.309 50.000 0.00 0.00 39.38 3.86
5327 5587 3.754850 TGCAGGTTCATTCAGATTCTGTG 59.245 43.478 13.23 5.84 32.56 3.66
5441 5918 2.472695 TTCCTGATCTGGTGGTTTCG 57.527 50.000 17.33 0.00 0.00 3.46
5469 5946 1.199852 GCCACAGTTTGTTTGTCGCG 61.200 55.000 0.00 0.00 0.00 5.87
5471 5948 1.179332 CACAGTTTGTTTGTCGCGTG 58.821 50.000 5.77 0.00 0.00 5.34
5473 5950 0.375454 CAGTTTGTTTGTCGCGTGGA 59.625 50.000 5.77 0.00 0.00 4.02
5474 5951 1.002900 CAGTTTGTTTGTCGCGTGGAT 60.003 47.619 5.77 0.00 0.00 3.41
5475 5952 1.002900 AGTTTGTTTGTCGCGTGGATG 60.003 47.619 5.77 0.00 0.00 3.51
5476 5953 1.018148 TTTGTTTGTCGCGTGGATGT 58.982 45.000 5.77 0.00 0.00 3.06
5543 6027 3.972227 GCTATATGCCGTGCCCAG 58.028 61.111 0.00 0.00 35.15 4.45
5566 6055 0.238289 ATGTCGTGCAAAAGCTTCGG 59.762 50.000 0.00 0.00 0.00 4.30
5570 6059 2.010817 GTGCAAAAGCTTCGGTGCG 61.011 57.895 19.09 0.49 39.92 5.34
5574 6063 0.934436 CAAAAGCTTCGGTGCGTTGG 60.934 55.000 0.00 0.00 35.08 3.77
5588 6077 3.496884 GTGCGTTGGAGTTTATTCAGTGA 59.503 43.478 0.00 0.00 0.00 3.41
5590 6079 4.576873 TGCGTTGGAGTTTATTCAGTGAAA 59.423 37.500 10.14 0.00 0.00 2.69
5607 6096 5.283060 GTGAAACTTTCAGCATATGTCGT 57.717 39.130 4.36 0.00 41.01 4.34
5608 6097 5.082059 GTGAAACTTTCAGCATATGTCGTG 58.918 41.667 4.36 0.33 41.01 4.35
5609 6098 3.747099 AACTTTCAGCATATGTCGTGC 57.253 42.857 4.29 0.00 42.81 5.34
5610 6099 2.698803 ACTTTCAGCATATGTCGTGCA 58.301 42.857 4.29 0.00 44.87 4.57
5611 6100 3.073678 ACTTTCAGCATATGTCGTGCAA 58.926 40.909 4.29 0.00 44.87 4.08
5612 6101 3.501828 ACTTTCAGCATATGTCGTGCAAA 59.498 39.130 4.29 3.20 44.87 3.68
5613 6102 4.023279 ACTTTCAGCATATGTCGTGCAAAA 60.023 37.500 4.29 0.85 44.87 2.44
5614 6103 3.745332 TCAGCATATGTCGTGCAAAAG 57.255 42.857 4.29 0.00 44.87 2.27
5615 6104 2.159531 TCAGCATATGTCGTGCAAAAGC 60.160 45.455 4.29 0.00 44.87 3.51
5616 6105 2.086869 AGCATATGTCGTGCAAAAGCT 58.913 42.857 4.29 0.00 44.87 3.74
5617 6106 2.489329 AGCATATGTCGTGCAAAAGCTT 59.511 40.909 4.29 0.00 44.87 3.74
5618 6107 2.848302 GCATATGTCGTGCAAAAGCTTC 59.152 45.455 0.00 0.00 42.08 3.86
5619 6108 2.873170 TATGTCGTGCAAAAGCTTCG 57.127 45.000 0.00 0.00 0.00 3.79
5620 6109 0.238289 ATGTCGTGCAAAAGCTTCGG 59.762 50.000 0.00 0.00 0.00 4.30
5624 6113 2.010817 GTGCAAAAGCTTCGGTGCG 61.011 57.895 19.09 0.49 39.92 5.34
5632 6121 2.953821 CTTCGGTGCGTGGCAAAT 59.046 55.556 0.00 0.00 41.47 2.32
5639 6128 1.335142 GGTGCGTGGCAAATTTTCGTA 60.335 47.619 0.00 0.00 41.47 3.43
5643 6132 4.617645 GTGCGTGGCAAATTTTCGTATTTA 59.382 37.500 0.00 0.00 41.47 1.40
5654 6143 8.921670 CAAATTTTCGTATTTAGACCCTTTTGG 58.078 33.333 0.00 0.00 41.37 3.28
5684 6173 1.080354 AGGATCTGACCCCGGTTCA 59.920 57.895 0.00 1.18 0.00 3.18
5738 6227 3.072468 CGGGTTCTGGCGGTAGGA 61.072 66.667 0.00 0.00 0.00 2.94
5984 6552 9.160412 ACACTATAGACCCTAAAATATGAGCTT 57.840 33.333 6.78 0.00 0.00 3.74
6114 6682 6.412214 TCTTAAGACAAGTTTATAGGGTGGC 58.588 40.000 0.00 0.00 0.00 5.01
6133 6706 4.099727 GTGGCTGGGTTTAGGTTTTTACAA 59.900 41.667 0.00 0.00 0.00 2.41
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 3.381983 ACTCAGTGGATGCGCCGA 61.382 61.111 4.18 0.00 40.66 5.54
2 3 3.503363 GCACTCAGTGGATGCGCC 61.503 66.667 7.00 0.00 33.64 6.53
10 11 2.507102 CTACCGCCGCACTCAGTG 60.507 66.667 0.00 0.00 36.51 3.66
11 12 3.760035 CCTACCGCCGCACTCAGT 61.760 66.667 0.00 0.00 0.00 3.41
12 13 4.514577 CCCTACCGCCGCACTCAG 62.515 72.222 0.00 0.00 0.00 3.35
22 23 4.404098 AAACCAGGCGCCCTACCG 62.404 66.667 26.15 8.64 29.64 4.02
23 24 2.750237 CAAACCAGGCGCCCTACC 60.750 66.667 26.15 0.00 29.64 3.18
24 25 3.440415 GCAAACCAGGCGCCCTAC 61.440 66.667 26.15 1.62 29.64 3.18
25 26 3.918253 CTGCAAACCAGGCGCCCTA 62.918 63.158 26.15 0.00 37.93 3.53
28 29 3.064324 ATCTGCAAACCAGGCGCC 61.064 61.111 21.89 21.89 42.05 6.53
29 30 1.865788 TTCATCTGCAAACCAGGCGC 61.866 55.000 0.00 0.00 42.05 6.53
30 31 0.169672 CTTCATCTGCAAACCAGGCG 59.830 55.000 0.00 0.00 42.05 5.52
31 32 0.529378 CCTTCATCTGCAAACCAGGC 59.471 55.000 0.00 0.00 42.05 4.85
32 33 0.529378 GCCTTCATCTGCAAACCAGG 59.471 55.000 0.00 0.00 42.05 4.45
33 34 0.169672 CGCCTTCATCTGCAAACCAG 59.830 55.000 0.00 0.00 43.17 4.00
34 35 0.250684 TCGCCTTCATCTGCAAACCA 60.251 50.000 0.00 0.00 0.00 3.67
35 36 0.449388 CTCGCCTTCATCTGCAAACC 59.551 55.000 0.00 0.00 0.00 3.27
36 37 1.442769 TCTCGCCTTCATCTGCAAAC 58.557 50.000 0.00 0.00 0.00 2.93
37 38 2.011947 CATCTCGCCTTCATCTGCAAA 58.988 47.619 0.00 0.00 0.00 3.68
38 39 1.065926 ACATCTCGCCTTCATCTGCAA 60.066 47.619 0.00 0.00 0.00 4.08
39 40 0.538584 ACATCTCGCCTTCATCTGCA 59.461 50.000 0.00 0.00 0.00 4.41
40 41 0.935898 CACATCTCGCCTTCATCTGC 59.064 55.000 0.00 0.00 0.00 4.26
41 42 2.306341 ACACATCTCGCCTTCATCTG 57.694 50.000 0.00 0.00 0.00 2.90
42 43 3.027412 AGTACACATCTCGCCTTCATCT 58.973 45.455 0.00 0.00 0.00 2.90
43 44 3.444703 AGTACACATCTCGCCTTCATC 57.555 47.619 0.00 0.00 0.00 2.92
44 45 5.537300 ATTAGTACACATCTCGCCTTCAT 57.463 39.130 0.00 0.00 0.00 2.57
45 46 5.221185 GGTATTAGTACACATCTCGCCTTCA 60.221 44.000 0.00 0.00 32.25 3.02
46 47 5.009811 AGGTATTAGTACACATCTCGCCTTC 59.990 44.000 0.00 0.00 32.25 3.46
47 48 4.894114 AGGTATTAGTACACATCTCGCCTT 59.106 41.667 0.00 0.00 32.25 4.35
48 49 4.471548 AGGTATTAGTACACATCTCGCCT 58.528 43.478 0.00 0.00 32.25 5.52
49 50 4.850347 AGGTATTAGTACACATCTCGCC 57.150 45.455 0.00 0.00 32.25 5.54
50 51 6.557291 ACTAGGTATTAGTACACATCTCGC 57.443 41.667 0.00 0.00 40.85 5.03
51 52 9.486497 TCTTACTAGGTATTAGTACACATCTCG 57.514 37.037 0.00 0.00 42.99 4.04
97 98 4.432741 GTGGAAGGCTGAGGGGGC 62.433 72.222 0.00 0.00 0.00 5.80
98 99 0.988145 TATGTGGAAGGCTGAGGGGG 60.988 60.000 0.00 0.00 0.00 5.40
99 100 0.471617 CTATGTGGAAGGCTGAGGGG 59.528 60.000 0.00 0.00 0.00 4.79
100 101 0.179034 GCTATGTGGAAGGCTGAGGG 60.179 60.000 0.00 0.00 0.00 4.30
101 102 0.835941 AGCTATGTGGAAGGCTGAGG 59.164 55.000 0.00 0.00 33.50 3.86
102 103 1.202627 GGAGCTATGTGGAAGGCTGAG 60.203 57.143 0.00 0.00 35.01 3.35
103 104 0.833287 GGAGCTATGTGGAAGGCTGA 59.167 55.000 0.00 0.00 35.01 4.26
104 105 0.531532 CGGAGCTATGTGGAAGGCTG 60.532 60.000 0.00 0.00 35.01 4.85
105 106 1.826024 CGGAGCTATGTGGAAGGCT 59.174 57.895 0.00 0.00 37.77 4.58
106 107 4.445699 CGGAGCTATGTGGAAGGC 57.554 61.111 0.00 0.00 0.00 4.35
130 131 3.346606 GGCGCGTATAGGCAAGGC 61.347 66.667 16.97 11.71 0.00 4.35
131 132 3.036084 CGGCGCGTATAGGCAAGG 61.036 66.667 16.97 2.74 0.00 3.61
132 133 3.702555 GCGGCGCGTATAGGCAAG 61.703 66.667 19.09 8.43 0.00 4.01
158 159 2.114825 GTCGTATATATAAGCGGCCGC 58.885 52.381 42.34 42.34 42.33 6.53
159 160 2.369600 CGTCGTATATATAAGCGGCCG 58.630 52.381 24.05 24.05 0.00 6.13
160 161 2.114825 GCGTCGTATATATAAGCGGCC 58.885 52.381 17.06 0.00 0.00 6.13
161 162 3.034562 GAGCGTCGTATATATAAGCGGC 58.965 50.000 17.06 13.96 0.00 6.53
162 163 3.278303 CGAGCGTCGTATATATAAGCGG 58.722 50.000 17.06 7.53 34.72 5.52
179 180 4.771356 TAGGACGCGTGCACGAGC 62.771 66.667 41.19 30.07 42.87 5.03
180 181 2.577112 CTAGGACGCGTGCACGAG 60.577 66.667 41.19 38.47 44.60 4.18
181 182 3.359523 ACTAGGACGCGTGCACGA 61.360 61.111 41.19 19.20 43.02 4.35
182 183 3.172575 CACTAGGACGCGTGCACG 61.173 66.667 34.01 34.01 43.27 5.34
191 192 3.584868 AACGCCCGTGCACTAGGAC 62.585 63.158 22.96 14.18 37.32 3.85
192 193 3.291101 GAACGCCCGTGCACTAGGA 62.291 63.158 22.96 0.00 37.32 2.94
193 194 2.813908 GAACGCCCGTGCACTAGG 60.814 66.667 16.19 16.28 37.32 3.02
194 195 2.813908 GGAACGCCCGTGCACTAG 60.814 66.667 16.19 6.96 37.32 2.57
195 196 3.291101 GAGGAACGCCCGTGCACTA 62.291 63.158 16.19 0.00 40.87 2.74
196 197 4.681978 GAGGAACGCCCGTGCACT 62.682 66.667 16.19 0.00 40.87 4.40
197 198 4.980805 TGAGGAACGCCCGTGCAC 62.981 66.667 6.82 6.82 40.87 4.57
198 199 3.545124 AATGAGGAACGCCCGTGCA 62.545 57.895 0.75 0.00 40.87 4.57
199 200 2.746277 AATGAGGAACGCCCGTGC 60.746 61.111 0.00 0.00 40.87 5.34
200 201 1.375396 TGAATGAGGAACGCCCGTG 60.375 57.895 0.00 0.00 40.87 4.94
201 202 1.375523 GTGAATGAGGAACGCCCGT 60.376 57.895 0.00 0.00 40.87 5.28
202 203 1.079127 AGTGAATGAGGAACGCCCG 60.079 57.895 0.00 0.00 40.87 6.13
203 204 0.036388 TCAGTGAATGAGGAACGCCC 60.036 55.000 0.00 0.00 32.77 6.13
204 205 2.029838 ATCAGTGAATGAGGAACGCC 57.970 50.000 0.00 0.00 42.53 5.68
205 206 3.002791 TCAATCAGTGAATGAGGAACGC 58.997 45.455 6.80 0.00 42.53 4.84
206 207 3.372206 GGTCAATCAGTGAATGAGGAACG 59.628 47.826 11.23 0.00 42.53 3.95
207 208 4.154918 GTGGTCAATCAGTGAATGAGGAAC 59.845 45.833 11.23 6.61 42.53 3.62
208 209 4.202451 TGTGGTCAATCAGTGAATGAGGAA 60.202 41.667 11.23 0.00 42.53 3.36
209 210 3.327464 TGTGGTCAATCAGTGAATGAGGA 59.673 43.478 11.23 0.00 42.53 3.71
210 211 3.438087 GTGTGGTCAATCAGTGAATGAGG 59.562 47.826 11.23 0.00 42.53 3.86
211 212 4.067192 TGTGTGGTCAATCAGTGAATGAG 58.933 43.478 11.23 0.00 42.53 2.90
212 213 3.814842 GTGTGTGGTCAATCAGTGAATGA 59.185 43.478 6.80 6.80 43.70 2.57
213 214 3.058016 GGTGTGTGGTCAATCAGTGAATG 60.058 47.826 1.44 1.44 38.23 2.67
214 215 3.149196 GGTGTGTGGTCAATCAGTGAAT 58.851 45.455 0.00 0.00 38.23 2.57
215 216 2.571212 GGTGTGTGGTCAATCAGTGAA 58.429 47.619 0.00 0.00 38.23 3.18
216 217 1.540146 CGGTGTGTGGTCAATCAGTGA 60.540 52.381 0.00 0.00 0.00 3.41
217 218 0.867746 CGGTGTGTGGTCAATCAGTG 59.132 55.000 0.00 0.00 0.00 3.66
218 219 0.468226 ACGGTGTGTGGTCAATCAGT 59.532 50.000 0.00 0.00 0.00 3.41
219 220 1.148310 GACGGTGTGTGGTCAATCAG 58.852 55.000 0.00 0.00 33.41 2.90
220 221 0.250124 GGACGGTGTGTGGTCAATCA 60.250 55.000 0.00 0.00 34.87 2.57
221 222 0.034896 AGGACGGTGTGTGGTCAATC 59.965 55.000 0.00 0.00 34.87 2.67
222 223 0.034896 GAGGACGGTGTGTGGTCAAT 59.965 55.000 0.00 0.00 34.87 2.57
223 224 1.331399 TGAGGACGGTGTGTGGTCAA 61.331 55.000 0.00 0.00 34.87 3.18
224 225 1.744320 CTGAGGACGGTGTGTGGTCA 61.744 60.000 0.00 0.00 34.87 4.02
225 226 1.006102 CTGAGGACGGTGTGTGGTC 60.006 63.158 0.00 0.00 0.00 4.02
226 227 1.335132 AACTGAGGACGGTGTGTGGT 61.335 55.000 0.00 0.00 35.61 4.16
227 228 0.179056 AAACTGAGGACGGTGTGTGG 60.179 55.000 0.00 0.00 35.61 4.17
228 229 0.937304 CAAACTGAGGACGGTGTGTG 59.063 55.000 0.00 0.00 36.25 3.82
229 230 0.539986 ACAAACTGAGGACGGTGTGT 59.460 50.000 0.00 0.00 45.72 3.72
230 231 1.202533 AGACAAACTGAGGACGGTGTG 60.203 52.381 0.00 0.00 43.97 3.82
231 232 1.068741 GAGACAAACTGAGGACGGTGT 59.931 52.381 0.00 0.00 35.61 4.16
232 233 1.341531 AGAGACAAACTGAGGACGGTG 59.658 52.381 0.00 0.00 35.61 4.94
233 234 1.614413 GAGAGACAAACTGAGGACGGT 59.386 52.381 0.00 0.00 37.19 4.83
234 235 1.613925 TGAGAGACAAACTGAGGACGG 59.386 52.381 0.00 0.00 0.00 4.79
235 236 2.034685 TGTGAGAGACAAACTGAGGACG 59.965 50.000 0.00 0.00 0.00 4.79
236 237 3.648009 CTGTGAGAGACAAACTGAGGAC 58.352 50.000 0.00 0.00 32.80 3.85
237 238 2.036475 GCTGTGAGAGACAAACTGAGGA 59.964 50.000 0.00 0.00 32.80 3.71
238 239 2.411904 GCTGTGAGAGACAAACTGAGG 58.588 52.381 0.00 0.00 32.80 3.86
239 240 2.224137 TGGCTGTGAGAGACAAACTGAG 60.224 50.000 0.00 0.00 36.43 3.35
240 241 1.762370 TGGCTGTGAGAGACAAACTGA 59.238 47.619 0.00 0.00 36.43 3.41
241 242 2.141517 CTGGCTGTGAGAGACAAACTG 58.858 52.381 0.00 0.00 40.18 3.16
242 243 2.036992 CTCTGGCTGTGAGAGACAAACT 59.963 50.000 0.00 0.00 40.18 2.66
243 244 2.411904 CTCTGGCTGTGAGAGACAAAC 58.588 52.381 0.00 0.00 40.18 2.93
244 245 1.270518 GCTCTGGCTGTGAGAGACAAA 60.271 52.381 3.93 0.00 40.18 2.83
245 246 0.319728 GCTCTGGCTGTGAGAGACAA 59.680 55.000 3.93 0.00 40.18 3.18
246 247 1.539560 GGCTCTGGCTGTGAGAGACA 61.540 60.000 3.93 0.00 44.09 3.41
247 248 1.217779 GGCTCTGGCTGTGAGAGAC 59.782 63.158 3.93 0.00 39.58 3.36
248 249 1.228988 TGGCTCTGGCTGTGAGAGA 60.229 57.895 3.93 0.00 39.58 3.10
249 250 1.079266 GTGGCTCTGGCTGTGAGAG 60.079 63.158 6.86 0.00 40.10 3.20
250 251 1.838396 TGTGGCTCTGGCTGTGAGA 60.838 57.895 6.86 0.00 38.73 3.27
251 252 1.670406 GTGTGGCTCTGGCTGTGAG 60.670 63.158 0.00 0.00 38.73 3.51
252 253 1.771783 ATGTGTGGCTCTGGCTGTGA 61.772 55.000 0.00 0.00 38.73 3.58
253 254 1.303074 ATGTGTGGCTCTGGCTGTG 60.303 57.895 0.00 0.00 38.73 3.66
254 255 1.002868 GATGTGTGGCTCTGGCTGT 60.003 57.895 0.00 0.00 38.73 4.40
255 256 1.002990 TGATGTGTGGCTCTGGCTG 60.003 57.895 0.00 0.00 38.73 4.85
256 257 1.298993 CTGATGTGTGGCTCTGGCT 59.701 57.895 0.00 0.00 38.73 4.75
257 258 2.404995 GCTGATGTGTGGCTCTGGC 61.405 63.158 0.00 0.00 37.82 4.85
258 259 1.748122 GGCTGATGTGTGGCTCTGG 60.748 63.158 0.00 0.00 0.00 3.86
259 260 1.002990 TGGCTGATGTGTGGCTCTG 60.003 57.895 0.00 0.00 0.00 3.35
260 261 1.002868 GTGGCTGATGTGTGGCTCT 60.003 57.895 0.00 0.00 0.00 4.09
261 262 2.042831 GGTGGCTGATGTGTGGCTC 61.043 63.158 0.00 0.00 0.00 4.70
262 263 2.034687 GGTGGCTGATGTGTGGCT 59.965 61.111 0.00 0.00 0.00 4.75
263 264 3.064324 GGGTGGCTGATGTGTGGC 61.064 66.667 0.00 0.00 0.00 5.01
264 265 2.361610 GGGGTGGCTGATGTGTGG 60.362 66.667 0.00 0.00 0.00 4.17
265 266 2.747460 CGGGGTGGCTGATGTGTG 60.747 66.667 0.00 0.00 0.00 3.82
266 267 4.722700 GCGGGGTGGCTGATGTGT 62.723 66.667 0.00 0.00 0.00 3.72
310 311 2.203379 TGATGATGGCCGCCATGG 60.203 61.111 29.86 7.63 45.26 3.66
311 312 2.558286 GGTGATGATGGCCGCCATG 61.558 63.158 29.86 0.00 45.26 3.66
313 314 3.405093 GAGGTGATGATGGCCGCCA 62.405 63.158 16.17 16.17 38.19 5.69
314 315 2.592861 GAGGTGATGATGGCCGCC 60.593 66.667 1.04 1.04 0.00 6.13
315 316 2.969238 CGAGGTGATGATGGCCGC 60.969 66.667 0.00 0.00 0.00 6.53
316 317 2.280389 CCGAGGTGATGATGGCCG 60.280 66.667 0.00 0.00 0.00 6.13
317 318 2.592861 GCCGAGGTGATGATGGCC 60.593 66.667 0.00 0.00 39.83 5.36
318 319 2.969238 CGCCGAGGTGATGATGGC 60.969 66.667 0.00 0.00 42.29 4.40
319 320 2.280389 CCGCCGAGGTGATGATGG 60.280 66.667 3.95 0.00 34.51 3.51
320 321 2.280389 CCCGCCGAGGTGATGATG 60.280 66.667 3.95 0.00 38.74 3.07
321 322 3.550431 CCCCGCCGAGGTGATGAT 61.550 66.667 3.95 0.00 38.74 2.45
341 342 3.188786 CTAGCGCGGCTCAACACC 61.189 66.667 8.83 0.00 40.44 4.16
342 343 3.854459 GCTAGCGCGGCTCAACAC 61.854 66.667 18.35 0.00 40.44 3.32
354 355 4.600576 GAGCTGGAGCCCGCTAGC 62.601 72.222 4.06 4.06 43.38 3.42
355 356 3.922640 GGAGCTGGAGCCCGCTAG 61.923 72.222 5.39 0.00 43.38 3.42
356 357 4.465446 AGGAGCTGGAGCCCGCTA 62.465 66.667 5.39 0.00 43.38 4.26
360 361 3.160748 GAGGAGGAGCTGGAGCCC 61.161 72.222 0.00 0.00 43.38 5.19
361 362 3.535962 CGAGGAGGAGCTGGAGCC 61.536 72.222 0.00 0.00 43.38 4.70
362 363 2.757917 ACGAGGAGGAGCTGGAGC 60.758 66.667 0.00 0.00 42.49 4.70
363 364 3.074999 GCACGAGGAGGAGCTGGAG 62.075 68.421 0.00 0.00 0.00 3.86
364 365 3.071206 GCACGAGGAGGAGCTGGA 61.071 66.667 0.00 0.00 0.00 3.86
365 366 3.073735 AGCACGAGGAGGAGCTGG 61.074 66.667 0.00 0.00 34.72 4.85
366 367 2.183811 CAGCACGAGGAGGAGCTG 59.816 66.667 0.00 0.00 43.17 4.24
367 368 3.768922 GCAGCACGAGGAGGAGCT 61.769 66.667 0.00 0.00 36.07 4.09
368 369 3.714871 GAGCAGCACGAGGAGGAGC 62.715 68.421 0.00 0.00 0.00 4.70
369 370 2.493973 GAGCAGCACGAGGAGGAG 59.506 66.667 0.00 0.00 0.00 3.69
370 371 3.443925 CGAGCAGCACGAGGAGGA 61.444 66.667 6.34 0.00 0.00 3.71
407 408 4.269523 GTCTGCACCCCTGGCACA 62.270 66.667 0.00 0.00 36.11 4.57
408 409 4.269523 TGTCTGCACCCCTGGCAC 62.270 66.667 0.00 0.00 36.11 5.01
409 410 3.957586 CTGTCTGCACCCCTGGCA 61.958 66.667 0.00 0.00 39.32 4.92
410 411 4.729918 CCTGTCTGCACCCCTGGC 62.730 72.222 0.00 0.00 0.00 4.85
411 412 4.729918 GCCTGTCTGCACCCCTGG 62.730 72.222 0.00 0.00 0.00 4.45
412 413 3.957586 TGCCTGTCTGCACCCCTG 61.958 66.667 0.00 0.00 36.04 4.45
427 428 2.125512 CCGACTAGGTGGCAGTGC 60.126 66.667 6.55 6.55 34.51 4.40
428 429 2.579201 CCCGACTAGGTGGCAGTG 59.421 66.667 0.00 0.00 38.74 3.66
429 430 2.683933 CCCCGACTAGGTGGCAGT 60.684 66.667 0.00 0.00 38.74 4.40
433 434 3.782443 GTGGCCCCGACTAGGTGG 61.782 72.222 0.00 0.00 38.74 4.61
434 435 3.782443 GGTGGCCCCGACTAGGTG 61.782 72.222 0.00 0.00 38.74 4.00
452 453 2.171725 GTCATAACGGGCGCTGTCC 61.172 63.158 7.64 0.00 0.00 4.02
453 454 1.153628 AGTCATAACGGGCGCTGTC 60.154 57.895 7.64 0.00 0.00 3.51
454 455 1.447838 CAGTCATAACGGGCGCTGT 60.448 57.895 7.64 3.18 0.00 4.40
455 456 1.447838 ACAGTCATAACGGGCGCTG 60.448 57.895 7.64 2.40 0.00 5.18
456 457 1.447838 CACAGTCATAACGGGCGCT 60.448 57.895 7.64 0.00 0.00 5.92
457 458 1.421410 CTCACAGTCATAACGGGCGC 61.421 60.000 0.00 0.00 0.00 6.53
458 459 0.108804 ACTCACAGTCATAACGGGCG 60.109 55.000 0.00 0.00 0.00 6.13
459 460 2.000447 GAACTCACAGTCATAACGGGC 59.000 52.381 0.00 0.00 0.00 6.13
460 461 2.028476 TGGAACTCACAGTCATAACGGG 60.028 50.000 0.00 0.00 0.00 5.28
461 462 3.313012 TGGAACTCACAGTCATAACGG 57.687 47.619 0.00 0.00 0.00 4.44
462 463 4.494484 TGATGGAACTCACAGTCATAACG 58.506 43.478 0.00 0.00 0.00 3.18
463 464 6.108687 TGATGATGGAACTCACAGTCATAAC 58.891 40.000 0.00 0.00 0.00 1.89
464 465 6.298441 TGATGATGGAACTCACAGTCATAA 57.702 37.500 0.00 0.00 0.00 1.90
465 466 5.937975 TGATGATGGAACTCACAGTCATA 57.062 39.130 0.00 0.00 0.00 2.15
466 467 4.831674 TGATGATGGAACTCACAGTCAT 57.168 40.909 0.00 0.00 0.00 3.06
467 468 4.831674 ATGATGATGGAACTCACAGTCA 57.168 40.909 0.00 0.00 0.00 3.41
468 469 8.309656 TGATATATGATGATGGAACTCACAGTC 58.690 37.037 0.00 0.00 0.00 3.51
469 470 8.198807 TGATATATGATGATGGAACTCACAGT 57.801 34.615 0.00 0.00 0.00 3.55
483 484 9.415544 CGGTGATGGTGTATATGATATATGATG 57.584 37.037 0.00 0.00 0.00 3.07
484 485 9.147732 ACGGTGATGGTGTATATGATATATGAT 57.852 33.333 0.00 0.00 0.00 2.45
485 486 8.533569 ACGGTGATGGTGTATATGATATATGA 57.466 34.615 0.00 0.00 0.00 2.15
486 487 9.678941 GTACGGTGATGGTGTATATGATATATG 57.321 37.037 0.00 0.00 0.00 1.78
487 488 8.857098 GGTACGGTGATGGTGTATATGATATAT 58.143 37.037 0.00 0.00 0.00 0.86
488 489 7.835181 TGGTACGGTGATGGTGTATATGATATA 59.165 37.037 0.00 0.00 0.00 0.86
489 490 6.666113 TGGTACGGTGATGGTGTATATGATAT 59.334 38.462 0.00 0.00 0.00 1.63
490 491 6.011481 TGGTACGGTGATGGTGTATATGATA 58.989 40.000 0.00 0.00 0.00 2.15
491 492 4.836175 TGGTACGGTGATGGTGTATATGAT 59.164 41.667 0.00 0.00 0.00 2.45
492 493 4.038282 GTGGTACGGTGATGGTGTATATGA 59.962 45.833 0.00 0.00 0.00 2.15
493 494 4.038763 AGTGGTACGGTGATGGTGTATATG 59.961 45.833 0.00 0.00 0.00 1.78
494 495 4.220724 AGTGGTACGGTGATGGTGTATAT 58.779 43.478 0.00 0.00 0.00 0.86
495 496 3.634504 AGTGGTACGGTGATGGTGTATA 58.365 45.455 0.00 0.00 0.00 1.47
496 497 2.463752 AGTGGTACGGTGATGGTGTAT 58.536 47.619 0.00 0.00 0.00 2.29
497 498 1.927487 AGTGGTACGGTGATGGTGTA 58.073 50.000 0.00 0.00 0.00 2.90
498 499 1.547372 GTAGTGGTACGGTGATGGTGT 59.453 52.381 0.00 0.00 0.00 4.16
499 500 1.546923 TGTAGTGGTACGGTGATGGTG 59.453 52.381 0.00 0.00 30.95 4.17
500 501 1.822990 CTGTAGTGGTACGGTGATGGT 59.177 52.381 0.00 0.00 31.61 3.55
501 502 2.097036 TCTGTAGTGGTACGGTGATGG 58.903 52.381 0.00 0.00 36.92 3.51
502 503 3.380320 TGATCTGTAGTGGTACGGTGATG 59.620 47.826 0.00 0.00 36.92 3.07
503 504 3.628008 TGATCTGTAGTGGTACGGTGAT 58.372 45.455 0.00 0.00 36.92 3.06
504 505 3.076079 TGATCTGTAGTGGTACGGTGA 57.924 47.619 0.00 0.00 36.92 4.02
505 506 3.861276 TTGATCTGTAGTGGTACGGTG 57.139 47.619 0.00 0.00 36.92 4.94
506 507 4.036027 CGTATTGATCTGTAGTGGTACGGT 59.964 45.833 0.00 0.00 36.92 4.83
507 508 4.036027 ACGTATTGATCTGTAGTGGTACGG 59.964 45.833 0.00 0.00 38.28 4.02
508 509 5.165911 ACGTATTGATCTGTAGTGGTACG 57.834 43.478 0.00 0.00 39.43 3.67
509 510 7.130917 CAGTACGTATTGATCTGTAGTGGTAC 58.869 42.308 12.37 0.00 35.56 3.34
510 511 6.825213 ACAGTACGTATTGATCTGTAGTGGTA 59.175 38.462 23.09 0.00 40.74 3.25
511 512 5.651139 ACAGTACGTATTGATCTGTAGTGGT 59.349 40.000 23.09 0.00 40.74 4.16
512 513 6.132791 ACAGTACGTATTGATCTGTAGTGG 57.867 41.667 23.09 0.00 40.74 4.00
513 514 6.472486 CCAACAGTACGTATTGATCTGTAGTG 59.528 42.308 23.09 14.00 41.67 2.74
514 515 6.152323 ACCAACAGTACGTATTGATCTGTAGT 59.848 38.462 23.09 15.65 38.21 2.73
515 516 6.561614 ACCAACAGTACGTATTGATCTGTAG 58.438 40.000 23.09 15.13 38.21 2.74
516 517 6.519679 ACCAACAGTACGTATTGATCTGTA 57.480 37.500 23.09 0.00 38.21 2.74
517 518 5.401531 ACCAACAGTACGTATTGATCTGT 57.598 39.130 23.09 15.88 40.40 3.41
518 519 5.459107 GCTACCAACAGTACGTATTGATCTG 59.541 44.000 23.09 15.27 0.00 2.90
519 520 5.589192 GCTACCAACAGTACGTATTGATCT 58.411 41.667 23.09 0.84 0.00 2.75
520 521 4.440103 CGCTACCAACAGTACGTATTGATC 59.560 45.833 23.09 0.00 0.00 2.92
521 522 4.357142 CGCTACCAACAGTACGTATTGAT 58.643 43.478 23.09 9.92 0.00 2.57
522 523 3.761657 CGCTACCAACAGTACGTATTGA 58.238 45.455 23.09 1.09 0.00 2.57
523 524 2.280708 GCGCTACCAACAGTACGTATTG 59.719 50.000 15.73 15.73 31.95 1.90
524 525 2.533266 GCGCTACCAACAGTACGTATT 58.467 47.619 0.00 0.00 31.95 1.89
525 526 1.532505 CGCGCTACCAACAGTACGTAT 60.533 52.381 5.56 0.00 31.95 3.06
526 527 0.179192 CGCGCTACCAACAGTACGTA 60.179 55.000 5.56 0.00 31.95 3.57
527 528 1.443194 CGCGCTACCAACAGTACGT 60.443 57.895 5.56 0.00 31.95 3.57
528 529 1.400990 GACGCGCTACCAACAGTACG 61.401 60.000 5.73 0.00 0.00 3.67
529 530 0.387622 TGACGCGCTACCAACAGTAC 60.388 55.000 5.73 0.00 0.00 2.73
530 531 0.387622 GTGACGCGCTACCAACAGTA 60.388 55.000 5.73 0.00 0.00 2.74
531 532 1.663702 GTGACGCGCTACCAACAGT 60.664 57.895 5.73 0.00 0.00 3.55
532 533 2.716828 CGTGACGCGCTACCAACAG 61.717 63.158 5.73 0.00 0.00 3.16
533 534 2.127634 TACGTGACGCGCTACCAACA 62.128 55.000 5.73 0.00 46.11 3.33
534 535 1.442520 TACGTGACGCGCTACCAAC 60.443 57.895 5.73 0.00 46.11 3.77
535 536 1.442520 GTACGTGACGCGCTACCAA 60.443 57.895 5.73 0.00 46.11 3.67
536 537 1.018752 TAGTACGTGACGCGCTACCA 61.019 55.000 5.73 0.00 46.11 3.25
537 538 0.305922 ATAGTACGTGACGCGCTACC 59.694 55.000 5.73 0.00 46.11 3.18
538 539 2.930230 TATAGTACGTGACGCGCTAC 57.070 50.000 5.73 4.34 46.11 3.58
539 540 2.158254 CCATATAGTACGTGACGCGCTA 59.842 50.000 5.73 8.25 46.11 4.26
540 541 1.069432 CCATATAGTACGTGACGCGCT 60.069 52.381 5.73 5.99 46.11 5.92
541 542 1.324718 CCATATAGTACGTGACGCGC 58.675 55.000 5.73 0.00 46.11 6.86
543 544 2.658285 CCACCATATAGTACGTGACGC 58.342 52.381 4.25 0.00 0.00 5.19
544 545 2.292569 AGCCACCATATAGTACGTGACG 59.707 50.000 2.24 2.24 0.00 4.35
545 546 4.082895 CCTAGCCACCATATAGTACGTGAC 60.083 50.000 0.00 0.00 0.00 3.67
546 547 4.077108 CCTAGCCACCATATAGTACGTGA 58.923 47.826 0.00 0.00 0.00 4.35
547 548 4.077108 TCCTAGCCACCATATAGTACGTG 58.923 47.826 0.00 0.00 0.00 4.49
548 549 4.377762 TCCTAGCCACCATATAGTACGT 57.622 45.455 0.00 0.00 0.00 3.57
549 550 5.194432 AGATCCTAGCCACCATATAGTACG 58.806 45.833 0.00 0.00 0.00 3.67
550 551 6.428295 AGAGATCCTAGCCACCATATAGTAC 58.572 44.000 0.00 0.00 0.00 2.73
551 552 6.217693 TGAGAGATCCTAGCCACCATATAGTA 59.782 42.308 0.00 0.00 0.00 1.82
552 553 5.015710 TGAGAGATCCTAGCCACCATATAGT 59.984 44.000 0.00 0.00 0.00 2.12
553 554 5.514169 TGAGAGATCCTAGCCACCATATAG 58.486 45.833 0.00 0.00 0.00 1.31
554 555 5.536497 TGAGAGATCCTAGCCACCATATA 57.464 43.478 0.00 0.00 0.00 0.86
555 556 4.410481 TGAGAGATCCTAGCCACCATAT 57.590 45.455 0.00 0.00 0.00 1.78
556 557 3.903530 TGAGAGATCCTAGCCACCATA 57.096 47.619 0.00 0.00 0.00 2.74
557 558 2.783379 TGAGAGATCCTAGCCACCAT 57.217 50.000 0.00 0.00 0.00 3.55
558 559 2.292521 ACTTGAGAGATCCTAGCCACCA 60.293 50.000 0.00 0.00 0.00 4.17
559 560 2.393646 ACTTGAGAGATCCTAGCCACC 58.606 52.381 0.00 0.00 0.00 4.61
560 561 5.599999 TTTACTTGAGAGATCCTAGCCAC 57.400 43.478 0.00 0.00 0.00 5.01
561 562 5.899547 TGATTTACTTGAGAGATCCTAGCCA 59.100 40.000 0.00 0.00 0.00 4.75
562 563 6.183360 TGTGATTTACTTGAGAGATCCTAGCC 60.183 42.308 0.00 0.00 0.00 3.93
563 564 6.810911 TGTGATTTACTTGAGAGATCCTAGC 58.189 40.000 0.00 0.00 0.00 3.42
564 565 8.859090 AGATGTGATTTACTTGAGAGATCCTAG 58.141 37.037 0.00 0.00 0.00 3.02
565 566 8.637099 CAGATGTGATTTACTTGAGAGATCCTA 58.363 37.037 0.00 0.00 0.00 2.94
566 567 7.344093 TCAGATGTGATTTACTTGAGAGATCCT 59.656 37.037 0.00 0.00 0.00 3.24
567 568 7.495901 TCAGATGTGATTTACTTGAGAGATCC 58.504 38.462 0.00 0.00 0.00 3.36
568 569 8.939201 TTCAGATGTGATTTACTTGAGAGATC 57.061 34.615 0.00 0.00 30.85 2.75
569 570 9.902684 ATTTCAGATGTGATTTACTTGAGAGAT 57.097 29.630 0.00 0.00 30.85 2.75
570 571 9.730705 AATTTCAGATGTGATTTACTTGAGAGA 57.269 29.630 0.00 0.00 30.85 3.10
577 578 8.897752 GCCTCTAAATTTCAGATGTGATTTACT 58.102 33.333 0.00 0.00 30.85 2.24
578 579 8.677300 TGCCTCTAAATTTCAGATGTGATTTAC 58.323 33.333 0.00 0.00 30.85 2.01
579 580 8.806429 TGCCTCTAAATTTCAGATGTGATTTA 57.194 30.769 0.00 0.00 30.85 1.40
580 581 7.707624 TGCCTCTAAATTTCAGATGTGATTT 57.292 32.000 0.00 0.00 30.85 2.17
581 582 7.707624 TTGCCTCTAAATTTCAGATGTGATT 57.292 32.000 0.00 0.00 30.85 2.57
582 583 7.707624 TTTGCCTCTAAATTTCAGATGTGAT 57.292 32.000 0.00 0.00 30.85 3.06
583 584 7.523293 TTTTGCCTCTAAATTTCAGATGTGA 57.477 32.000 0.00 0.00 0.00 3.58
584 585 8.653338 CAATTTTGCCTCTAAATTTCAGATGTG 58.347 33.333 0.00 0.00 34.01 3.21
585 586 7.820872 CCAATTTTGCCTCTAAATTTCAGATGT 59.179 33.333 0.00 0.00 34.01 3.06
586 587 7.820872 ACCAATTTTGCCTCTAAATTTCAGATG 59.179 33.333 0.00 0.00 34.01 2.90
587 588 7.820872 CACCAATTTTGCCTCTAAATTTCAGAT 59.179 33.333 0.00 0.00 34.01 2.90
588 589 7.153985 CACCAATTTTGCCTCTAAATTTCAGA 58.846 34.615 0.00 0.00 34.01 3.27
589 590 6.930722 ACACCAATTTTGCCTCTAAATTTCAG 59.069 34.615 0.00 0.00 34.01 3.02
590 591 6.825610 ACACCAATTTTGCCTCTAAATTTCA 58.174 32.000 0.00 0.00 34.01 2.69
591 592 7.154656 AGACACCAATTTTGCCTCTAAATTTC 58.845 34.615 0.00 0.00 34.01 2.17
592 593 7.066307 AGACACCAATTTTGCCTCTAAATTT 57.934 32.000 0.00 0.00 34.01 1.82
593 594 6.670695 AGACACCAATTTTGCCTCTAAATT 57.329 33.333 0.00 0.00 36.03 1.82
594 595 6.378280 CCTAGACACCAATTTTGCCTCTAAAT 59.622 38.462 0.00 0.00 0.00 1.40
595 596 5.710099 CCTAGACACCAATTTTGCCTCTAAA 59.290 40.000 0.00 0.00 0.00 1.85
596 597 5.013704 TCCTAGACACCAATTTTGCCTCTAA 59.986 40.000 0.00 0.00 0.00 2.10
597 598 4.534500 TCCTAGACACCAATTTTGCCTCTA 59.466 41.667 0.00 0.00 0.00 2.43
598 599 3.330701 TCCTAGACACCAATTTTGCCTCT 59.669 43.478 0.00 0.00 0.00 3.69
599 600 3.686016 TCCTAGACACCAATTTTGCCTC 58.314 45.455 0.00 0.00 0.00 4.70
600 601 3.806949 TCCTAGACACCAATTTTGCCT 57.193 42.857 0.00 0.00 0.00 4.75
601 602 4.273318 AGATCCTAGACACCAATTTTGCC 58.727 43.478 0.00 0.00 0.00 4.52
602 603 5.189180 AGAGATCCTAGACACCAATTTTGC 58.811 41.667 0.00 0.00 0.00 3.68
603 604 6.409704 TGAGAGATCCTAGACACCAATTTTG 58.590 40.000 0.00 0.00 0.00 2.44
604 605 6.627087 TGAGAGATCCTAGACACCAATTTT 57.373 37.500 0.00 0.00 0.00 1.82
605 606 6.441924 TCTTGAGAGATCCTAGACACCAATTT 59.558 38.462 0.00 0.00 0.00 1.82
606 607 5.960811 TCTTGAGAGATCCTAGACACCAATT 59.039 40.000 0.00 0.00 0.00 2.32
607 608 5.523588 TCTTGAGAGATCCTAGACACCAAT 58.476 41.667 0.00 0.00 0.00 3.16
608 609 4.935578 TCTTGAGAGATCCTAGACACCAA 58.064 43.478 0.00 0.00 0.00 3.67
609 610 4.228438 TCTCTTGAGAGATCCTAGACACCA 59.772 45.833 6.62 0.00 45.48 4.17
610 611 4.787551 TCTCTTGAGAGATCCTAGACACC 58.212 47.826 6.62 0.00 45.48 4.16
622 623 6.375455 AGAAGAAAGTCTAGCTCTCTTGAGAG 59.625 42.308 19.99 19.99 42.73 3.20
623 624 6.245408 AGAAGAAAGTCTAGCTCTCTTGAGA 58.755 40.000 7.28 0.13 42.73 3.27
624 625 6.515272 AGAAGAAAGTCTAGCTCTCTTGAG 57.485 41.667 7.28 0.00 42.96 3.02
625 626 7.335924 GTCTAGAAGAAAGTCTAGCTCTCTTGA 59.664 40.741 7.28 0.00 44.62 3.02
626 627 7.336931 AGTCTAGAAGAAAGTCTAGCTCTCTTG 59.663 40.741 7.28 0.00 44.62 3.02
627 628 7.402862 AGTCTAGAAGAAAGTCTAGCTCTCTT 58.597 38.462 0.00 3.37 44.62 2.85
628 629 6.958767 AGTCTAGAAGAAAGTCTAGCTCTCT 58.041 40.000 0.00 0.00 44.62 3.10
629 630 7.472543 CAAGTCTAGAAGAAAGTCTAGCTCTC 58.527 42.308 0.00 0.00 44.62 3.20
630 631 6.127730 GCAAGTCTAGAAGAAAGTCTAGCTCT 60.128 42.308 0.00 3.69 44.62 4.09
631 632 6.033966 GCAAGTCTAGAAGAAAGTCTAGCTC 58.966 44.000 0.00 1.84 44.62 4.09
632 633 5.105513 GGCAAGTCTAGAAGAAAGTCTAGCT 60.106 44.000 0.00 0.00 44.62 3.32
633 634 5.106442 GGCAAGTCTAGAAGAAAGTCTAGC 58.894 45.833 0.00 1.48 44.62 3.42
634 635 5.186021 TGGGCAAGTCTAGAAGAAAGTCTAG 59.814 44.000 0.00 3.32 45.81 2.43
635 636 5.047235 GTGGGCAAGTCTAGAAGAAAGTCTA 60.047 44.000 0.00 0.00 0.00 2.59
636 637 3.904339 TGGGCAAGTCTAGAAGAAAGTCT 59.096 43.478 0.00 0.00 0.00 3.24
637 638 3.997681 GTGGGCAAGTCTAGAAGAAAGTC 59.002 47.826 0.00 0.00 0.00 3.01
638 639 3.244596 GGTGGGCAAGTCTAGAAGAAAGT 60.245 47.826 0.00 0.00 0.00 2.66
639 640 3.244561 TGGTGGGCAAGTCTAGAAGAAAG 60.245 47.826 0.00 0.00 0.00 2.62
640 641 2.708861 TGGTGGGCAAGTCTAGAAGAAA 59.291 45.455 0.00 0.00 0.00 2.52
641 642 2.334977 TGGTGGGCAAGTCTAGAAGAA 58.665 47.619 0.00 0.00 0.00 2.52
642 643 2.024176 TGGTGGGCAAGTCTAGAAGA 57.976 50.000 0.00 0.00 0.00 2.87
643 644 2.616510 CCTTGGTGGGCAAGTCTAGAAG 60.617 54.545 0.00 0.00 0.00 2.85
644 645 1.351017 CCTTGGTGGGCAAGTCTAGAA 59.649 52.381 0.00 0.00 0.00 2.10
645 646 0.984230 CCTTGGTGGGCAAGTCTAGA 59.016 55.000 0.00 0.00 0.00 2.43
646 647 3.558674 CCTTGGTGGGCAAGTCTAG 57.441 57.895 0.00 0.00 0.00 2.43
682 683 5.106555 CGAGGAAAATGCTTTCACTGTACAT 60.107 40.000 0.00 0.00 42.44 2.29
683 684 4.213270 CGAGGAAAATGCTTTCACTGTACA 59.787 41.667 0.00 0.00 42.44 2.90
684 685 4.451096 TCGAGGAAAATGCTTTCACTGTAC 59.549 41.667 1.41 0.00 42.44 2.90
687 688 4.691860 ATCGAGGAAAATGCTTTCACTG 57.308 40.909 0.00 0.00 42.44 3.66
714 715 2.474359 GCTCGTACACATGCATCATCTC 59.526 50.000 0.00 0.00 0.00 2.75
732 734 2.341760 CACGCTACAGACTTAAACGCTC 59.658 50.000 0.00 0.00 0.00 5.03
749 761 4.916870 ACAGTTTTTCCTTAGAAACACGC 58.083 39.130 0.00 0.00 44.06 5.34
759 771 4.285863 TGGACAATGGACAGTTTTTCCTT 58.714 39.130 0.00 0.00 33.84 3.36
768 780 7.095102 GGATTTGAAATTTTGGACAATGGACAG 60.095 37.037 0.00 0.00 0.00 3.51
811 823 3.648009 GTCGGTTGCATTTGGATTTTGA 58.352 40.909 0.00 0.00 0.00 2.69
812 824 2.408032 CGTCGGTTGCATTTGGATTTTG 59.592 45.455 0.00 0.00 0.00 2.44
813 825 2.609244 CCGTCGGTTGCATTTGGATTTT 60.609 45.455 2.08 0.00 0.00 1.82
891 903 5.173131 GGAAAGAGTTTTGTTTGCATACGTG 59.827 40.000 0.00 0.00 29.87 4.49
893 905 5.277825 TGGAAAGAGTTTTGTTTGCATACG 58.722 37.500 2.77 0.00 33.91 3.06
894 906 5.691754 CCTGGAAAGAGTTTTGTTTGCATAC 59.308 40.000 0.00 0.00 37.30 2.39
895 907 5.596361 TCCTGGAAAGAGTTTTGTTTGCATA 59.404 36.000 0.00 0.00 37.30 3.14
896 908 4.405358 TCCTGGAAAGAGTTTTGTTTGCAT 59.595 37.500 0.00 0.00 37.30 3.96
897 909 3.766591 TCCTGGAAAGAGTTTTGTTTGCA 59.233 39.130 0.00 0.00 35.94 4.08
1095 1129 3.393970 CGGGGGAGAGCTGAAGCA 61.394 66.667 4.90 0.00 45.16 3.91
1117 1151 2.509336 CTGCCGGACATGTCGACC 60.509 66.667 19.33 10.02 0.00 4.79
1210 1247 0.933700 CCTCCTCCTCCTCTTCCTCT 59.066 60.000 0.00 0.00 0.00 3.69
1324 1364 0.907704 TAACGAGGAGTGGCATGGGT 60.908 55.000 0.00 0.00 0.00 4.51
1372 1413 1.284297 TGACAACACGAGCGCAGATG 61.284 55.000 11.47 6.72 0.00 2.90
1389 1430 0.615850 TGGCACGGGATAACACATGA 59.384 50.000 0.00 0.00 0.00 3.07
1494 1535 2.104792 CAGATTAGGCATCTTCCCCGAA 59.895 50.000 0.00 0.00 40.67 4.30
1566 1607 5.389859 TCAAGCATGGACAAAAGTATTGG 57.610 39.130 0.00 0.00 0.00 3.16
1578 1619 0.111061 AGTGGCAGTTCAAGCATGGA 59.889 50.000 0.00 0.00 0.00 3.41
1582 1623 1.024271 GACAAGTGGCAGTTCAAGCA 58.976 50.000 4.17 0.00 0.00 3.91
1601 1642 0.988145 TGCCCCATCCAGAAGGGTAG 60.988 60.000 7.17 0.00 43.89 3.18
1617 1658 3.812053 CAGATTACATCCTACAAGCTGCC 59.188 47.826 0.00 0.00 30.00 4.85
1641 1685 5.936686 ACTCTCAATCAACACAACTGATG 57.063 39.130 0.00 0.00 33.76 3.07
1645 1689 4.526970 ACCAACTCTCAATCAACACAACT 58.473 39.130 0.00 0.00 0.00 3.16
1649 1693 4.096382 ACACAACCAACTCTCAATCAACAC 59.904 41.667 0.00 0.00 0.00 3.32
1665 1709 2.543653 CCTAGCAAGCAAACACACAACC 60.544 50.000 0.00 0.00 0.00 3.77
1668 1712 1.317613 CCCTAGCAAGCAAACACACA 58.682 50.000 0.00 0.00 0.00 3.72
1683 1727 1.281867 CACACCTTGAGCAATCCCCTA 59.718 52.381 0.00 0.00 0.00 3.53
1684 1728 0.038744 CACACCTTGAGCAATCCCCT 59.961 55.000 0.00 0.00 0.00 4.79
1685 1729 1.598701 GCACACCTTGAGCAATCCCC 61.599 60.000 0.00 0.00 34.08 4.81
1686 1730 1.598701 GGCACACCTTGAGCAATCCC 61.599 60.000 0.00 0.00 35.63 3.85
1687 1731 1.885871 GGCACACCTTGAGCAATCC 59.114 57.895 0.00 0.00 35.63 3.01
1699 1743 7.880195 ACCTTATTATCATGATTCTAGGCACAC 59.120 37.037 14.65 0.00 0.00 3.82
1700 1744 7.879677 CACCTTATTATCATGATTCTAGGCACA 59.120 37.037 14.65 0.00 0.00 4.57
1718 1762 6.037172 GCTATCGTCATGTGTTTCACCTTATT 59.963 38.462 0.00 0.00 32.73 1.40
2000 2051 2.932234 CGTCGAGGCTGGTGGTTCT 61.932 63.158 0.00 0.00 0.00 3.01
2293 2344 1.452108 GGATTAAGGCCAGCACGCT 60.452 57.895 5.01 0.00 0.00 5.07
2502 2553 4.565962 CAGATTGTTCTCCGAACATCTCAG 59.434 45.833 9.91 4.71 0.00 3.35
2575 2626 9.794685 CCAAAGAGCTTAGAAGAATAATTTTCC 57.205 33.333 0.00 0.00 0.00 3.13
2719 2770 1.666189 GCTGTGGAGCGATTAACCTTC 59.334 52.381 0.00 0.00 34.87 3.46
2882 2936 7.940137 ACTGTACCCAAACAAATTAGTGATGTA 59.060 33.333 0.00 0.00 0.00 2.29
2923 2977 3.988379 ACACAATGGTAAGCACAACTG 57.012 42.857 0.00 0.00 0.00 3.16
2924 2978 3.951037 TGAACACAATGGTAAGCACAACT 59.049 39.130 0.00 0.00 0.00 3.16
2925 2979 4.300189 TGAACACAATGGTAAGCACAAC 57.700 40.909 0.00 0.00 0.00 3.32
2926 2980 5.163468 ACAATGAACACAATGGTAAGCACAA 60.163 36.000 0.00 0.00 0.00 3.33
2927 2981 4.340666 ACAATGAACACAATGGTAAGCACA 59.659 37.500 0.00 0.00 0.00 4.57
2928 2982 4.870363 ACAATGAACACAATGGTAAGCAC 58.130 39.130 0.00 0.00 0.00 4.40
2929 2983 6.208402 ACATACAATGAACACAATGGTAAGCA 59.792 34.615 0.00 0.00 0.00 3.91
2930 2984 6.620678 ACATACAATGAACACAATGGTAAGC 58.379 36.000 0.00 0.00 0.00 3.09
2961 3015 4.799428 GCAGAACTACTTAAGCTTCCTACG 59.201 45.833 0.00 0.00 0.00 3.51
3061 3115 6.987404 TCATATACGTACCTGCAAGCATTAAA 59.013 34.615 0.00 0.00 0.00 1.52
3778 3833 2.643232 GGCTTCCTGGCTTTGCTGG 61.643 63.158 0.00 0.00 38.32 4.85
4085 4140 7.833285 TGGCAACTTAAAAGGAAGAAATAGT 57.167 32.000 0.00 0.00 37.61 2.12
4175 4355 6.423001 ACAGAACTTACAAAATCTACACCGAC 59.577 38.462 0.00 0.00 0.00 4.79
4304 4486 5.476599 TGCCACAAACTGCATATCTTTAGTT 59.523 36.000 0.00 0.00 35.06 2.24
4305 4487 5.009631 TGCCACAAACTGCATATCTTTAGT 58.990 37.500 0.00 0.00 31.31 2.24
4326 4508 3.478509 TCTTCCTCTCGAGTATAGGTGC 58.521 50.000 13.13 0.00 0.00 5.01
4330 4512 9.715121 ACTAAACTATCTTCCTCTCGAGTATAG 57.285 37.037 13.13 12.36 0.00 1.31
4343 4525 4.155280 TGCCGCCAAAACTAAACTATCTTC 59.845 41.667 0.00 0.00 0.00 2.87
4572 4754 0.473755 TATCATGCGCCATTCCTGGT 59.526 50.000 4.18 0.00 45.10 4.00
4846 5028 5.344128 GCATGCAAATATTCAGCGATTTAGG 59.656 40.000 14.21 0.00 0.00 2.69
4971 5230 1.720852 CAAAGTATTTTGCAGTGCGCC 59.279 47.619 11.20 0.00 35.03 6.53
5087 5346 4.757594 TGGCATGCAAATATTCCAAACTC 58.242 39.130 21.36 0.00 0.00 3.01
5153 5412 7.376336 GTGAAGTTGCACAGTACTCGTATATAG 59.624 40.741 0.00 0.00 38.63 1.31
5154 5413 7.066645 AGTGAAGTTGCACAGTACTCGTATATA 59.933 37.037 0.00 0.00 41.19 0.86
5155 5414 6.034591 GTGAAGTTGCACAGTACTCGTATAT 58.965 40.000 0.00 0.00 38.63 0.86
5156 5415 5.182570 AGTGAAGTTGCACAGTACTCGTATA 59.817 40.000 0.00 0.00 41.19 1.47
5158 5417 3.317149 AGTGAAGTTGCACAGTACTCGTA 59.683 43.478 0.00 0.00 41.19 3.43
5159 5418 2.100916 AGTGAAGTTGCACAGTACTCGT 59.899 45.455 0.00 0.00 41.19 4.18
5168 5427 5.869753 ACAGAATGATAGTGAAGTTGCAC 57.130 39.130 0.00 0.00 39.69 4.57
5248 5508 4.326504 AAATCCAGAGCCAAAACAGTTG 57.673 40.909 0.00 0.00 0.00 3.16
5566 6055 3.496884 TCACTGAATAAACTCCAACGCAC 59.503 43.478 0.00 0.00 0.00 5.34
5570 6059 8.188139 TGAAAGTTTCACTGAATAAACTCCAAC 58.812 33.333 14.35 0.00 43.35 3.77
5574 6063 7.417612 TGCTGAAAGTTTCACTGAATAAACTC 58.582 34.615 14.35 0.00 43.35 3.01
5588 6077 3.501828 TGCACGACATATGCTGAAAGTTT 59.498 39.130 1.58 0.00 43.77 2.66
5590 6079 2.698803 TGCACGACATATGCTGAAAGT 58.301 42.857 1.58 0.00 43.77 2.66
5595 6084 2.179589 GCTTTTGCACGACATATGCTG 58.820 47.619 1.58 0.00 46.58 4.41
5596 6085 2.549633 GCTTTTGCACGACATATGCT 57.450 45.000 1.58 0.00 46.58 3.79
5609 6098 1.370414 CCACGCACCGAAGCTTTTG 60.370 57.895 0.00 0.00 0.00 2.44
5610 6099 3.030652 CCACGCACCGAAGCTTTT 58.969 55.556 0.00 0.00 0.00 2.27
5611 6100 3.660111 GCCACGCACCGAAGCTTT 61.660 61.111 0.00 0.00 0.00 3.51
5612 6101 4.927782 TGCCACGCACCGAAGCTT 62.928 61.111 0.00 0.00 31.71 3.74
5613 6102 4.927782 TTGCCACGCACCGAAGCT 62.928 61.111 0.00 0.00 38.71 3.74
5614 6103 2.747507 AATTTGCCACGCACCGAAGC 62.748 55.000 0.00 0.00 38.71 3.86
5615 6104 0.318614 AAATTTGCCACGCACCGAAG 60.319 50.000 0.00 0.00 38.71 3.79
5616 6105 0.103208 AAAATTTGCCACGCACCGAA 59.897 45.000 0.00 0.00 38.71 4.30
5617 6106 0.318275 GAAAATTTGCCACGCACCGA 60.318 50.000 0.00 0.00 38.71 4.69
5618 6107 1.604612 CGAAAATTTGCCACGCACCG 61.605 55.000 0.00 0.00 38.71 4.94
5619 6108 0.596341 ACGAAAATTTGCCACGCACC 60.596 50.000 0.00 0.00 38.71 5.01
5620 6109 2.039327 TACGAAAATTTGCCACGCAC 57.961 45.000 0.00 0.00 38.71 5.34
5624 6113 5.803461 GGGTCTAAATACGAAAATTTGCCAC 59.197 40.000 0.00 0.00 31.63 5.01
5632 6121 6.305411 TCCCAAAAGGGTCTAAATACGAAAA 58.695 36.000 0.00 0.00 35.67 2.29
5639 6128 8.679344 AATTTGTATCCCAAAAGGGTCTAAAT 57.321 30.769 0.00 2.28 45.72 1.40
5643 6132 5.650283 TGAATTTGTATCCCAAAAGGGTCT 58.350 37.500 0.00 0.00 45.72 3.85
5654 6143 5.066593 GGGTCAGATCCTGAATTTGTATCC 58.933 45.833 0.00 0.00 42.46 2.59
5684 6173 5.810095 AGGGTCAGATCTCGAAAATTTTCT 58.190 37.500 24.53 9.32 35.07 2.52
5784 6352 2.125673 CACGGGTTCTGGCGGTAG 60.126 66.667 0.00 0.00 0.00 3.18
5862 6430 1.449778 GAAAGTACCTCCCGCCAGC 60.450 63.158 0.00 0.00 0.00 4.85
5877 6445 2.652095 CCCTGGCGGTAGGACGAAA 61.652 63.158 0.00 0.00 40.42 3.46
5901 6469 1.125711 AAACACAGGACCCTACCGCT 61.126 55.000 0.00 0.00 34.73 5.52
6042 6610 6.579666 TCTTTGTGAGCTCATATTTTGCTT 57.420 33.333 21.47 0.00 37.16 3.91
6108 6676 0.178944 AAACCTAAACCCAGCCACCC 60.179 55.000 0.00 0.00 0.00 4.61


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.