Multiple sequence alignment - TraesCS5B01G297900
BLAST Results
Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.
qseqid | sseqid | percentage.identical | alignment.length | no.mismatch | no.gap.openings | qstart | qend | sstart | send | evalue | bitscore | |
---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G297900 | chr5B | 100.000 | 2582 | 0 | 0 | 1 | 2582 | 480297821 | 480300402 | 0.000000e+00 | 4769 |
1 | TraesCS5B01G297900 | chr5B | 91.818 | 110 | 7 | 2 | 2467 | 2575 | 704989369 | 704989261 | 4.450000e-33 | 152 |
2 | TraesCS5B01G297900 | chr5A | 91.360 | 2014 | 113 | 26 | 2 | 1959 | 505623156 | 505625164 | 0.000000e+00 | 2699 |
3 | TraesCS5B01G297900 | chr5A | 86.423 | 383 | 23 | 12 | 1943 | 2310 | 505625177 | 505625545 | 2.410000e-105 | 392 |
4 | TraesCS5B01G297900 | chr5D | 92.342 | 1123 | 52 | 11 | 89 | 1186 | 400292742 | 400293855 | 0.000000e+00 | 1567 |
5 | TraesCS5B01G297900 | chr5D | 89.514 | 658 | 28 | 13 | 1652 | 2308 | 400294240 | 400294857 | 0.000000e+00 | 795 |
6 | TraesCS5B01G297900 | chr5D | 91.816 | 391 | 23 | 3 | 1236 | 1618 | 400293848 | 400294237 | 1.050000e-148 | 536 |
7 | TraesCS5B01G297900 | chr5D | 95.652 | 92 | 4 | 0 | 2309 | 2400 | 330119955 | 330119864 | 5.760000e-32 | 148 |
8 | TraesCS5B01G297900 | chr1A | 80.802 | 1422 | 131 | 71 | 357 | 1672 | 560313559 | 560314944 | 0.000000e+00 | 983 |
9 | TraesCS5B01G297900 | chr1B | 82.821 | 1042 | 96 | 39 | 357 | 1346 | 645520610 | 645519600 | 0.000000e+00 | 856 |
10 | TraesCS5B01G297900 | chr1B | 94.898 | 98 | 5 | 0 | 2467 | 2564 | 476030853 | 476030756 | 1.240000e-33 | 154 |
11 | TraesCS5B01G297900 | chr1D | 83.198 | 988 | 106 | 31 | 724 | 1692 | 467626525 | 467625579 | 0.000000e+00 | 850 |
12 | TraesCS5B01G297900 | chr1D | 86.503 | 326 | 24 | 6 | 357 | 675 | 467627652 | 467627340 | 8.850000e-90 | 340 |
13 | TraesCS5B01G297900 | chr4D | 85.283 | 265 | 31 | 5 | 1381 | 1645 | 432433841 | 432434097 | 1.520000e-67 | 267 |
14 | TraesCS5B01G297900 | chr7B | 93.789 | 161 | 7 | 1 | 2309 | 2469 | 56385241 | 56385084 | 3.320000e-59 | 239 |
15 | TraesCS5B01G297900 | chr2A | 91.391 | 151 | 12 | 1 | 2306 | 2456 | 768678465 | 768678614 | 3.370000e-49 | 206 |
16 | TraesCS5B01G297900 | chr2B | 94.949 | 99 | 5 | 0 | 2467 | 2565 | 629108532 | 629108630 | 3.440000e-34 | 156 |
17 | TraesCS5B01G297900 | chr2B | 93.204 | 103 | 7 | 0 | 2467 | 2569 | 172750179 | 172750077 | 4.450000e-33 | 152 |
18 | TraesCS5B01G297900 | chr3D | 91.818 | 110 | 9 | 0 | 2461 | 2570 | 48070905 | 48071014 | 1.240000e-33 | 154 |
19 | TraesCS5B01G297900 | chr3D | 90.991 | 111 | 8 | 2 | 2468 | 2576 | 603946257 | 603946147 | 5.760000e-32 | 148 |
20 | TraesCS5B01G297900 | chrUn | 89.655 | 116 | 9 | 3 | 2466 | 2578 | 71546894 | 71546779 | 7.450000e-31 | 145 |
21 | TraesCS5B01G297900 | chrUn | 89.655 | 116 | 9 | 3 | 2466 | 2578 | 268022474 | 268022359 | 7.450000e-31 | 145 |
22 | TraesCS5B01G297900 | chr7D | 92.157 | 102 | 8 | 0 | 2467 | 2568 | 540413445 | 540413344 | 7.450000e-31 | 145 |
These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.
query | scaffold | start | end | length | rev.comp | avg.bitscore | max.bitscore | avg.percent.identical | query.start | query.end | num_hsp | groupid | homo_length | |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
0 | TraesCS5B01G297900 | chr5B | 480297821 | 480300402 | 2581 | False | 4769.0 | 4769 | 100.0000 | 1 | 2582 | 1 | chr5B.!!$F1 | 2581 |
1 | TraesCS5B01G297900 | chr5A | 505623156 | 505625545 | 2389 | False | 1545.5 | 2699 | 88.8915 | 2 | 2310 | 2 | chr5A.!!$F1 | 2308 |
2 | TraesCS5B01G297900 | chr5D | 400292742 | 400294857 | 2115 | False | 966.0 | 1567 | 91.2240 | 89 | 2308 | 3 | chr5D.!!$F1 | 2219 |
3 | TraesCS5B01G297900 | chr1A | 560313559 | 560314944 | 1385 | False | 983.0 | 983 | 80.8020 | 357 | 1672 | 1 | chr1A.!!$F1 | 1315 |
4 | TraesCS5B01G297900 | chr1B | 645519600 | 645520610 | 1010 | True | 856.0 | 856 | 82.8210 | 357 | 1346 | 1 | chr1B.!!$R2 | 989 |
5 | TraesCS5B01G297900 | chr1D | 467625579 | 467627652 | 2073 | True | 595.0 | 850 | 84.8505 | 357 | 1692 | 2 | chr1D.!!$R1 | 1335 |
AutoCloner calculated primer pairsThese primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
65 | 66 | 0.106268 | TTGCCCTTTCAGTGCCTTCA | 60.106 | 50.0 | 0.0 | 0.0 | 0.0 | 3.02 | F |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability | Orientation |
---|---|---|---|---|---|---|---|---|---|---|
1833 | 2746 | 0.10852 | GGATCCGGCGACACTTTACA | 60.109 | 55.0 | 9.3 | 0.0 | 0.0 | 2.41 | R |
All possible primersListed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives. |
---|
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
21 | 22 | 3.892284 | TGAAACTGAACCTGCTTAACCA | 58.108 | 40.909 | 0.00 | 0.00 | 0.00 | 3.67 |
23 | 24 | 4.278170 | TGAAACTGAACCTGCTTAACCATG | 59.722 | 41.667 | 0.00 | 0.00 | 0.00 | 3.66 |
29 | 30 | 4.042311 | TGAACCTGCTTAACCATGACCTTA | 59.958 | 41.667 | 0.00 | 0.00 | 0.00 | 2.69 |
40 | 41 | 4.265073 | ACCATGACCTTAATTCACTCTGC | 58.735 | 43.478 | 0.00 | 0.00 | 0.00 | 4.26 |
42 | 43 | 4.334759 | CCATGACCTTAATTCACTCTGCTG | 59.665 | 45.833 | 0.00 | 0.00 | 0.00 | 4.41 |
46 | 47 | 5.221722 | TGACCTTAATTCACTCTGCTGTTCT | 60.222 | 40.000 | 0.00 | 0.00 | 0.00 | 3.01 |
54 | 55 | 1.133668 | ACTCTGCTGTTCTTGCCCTTT | 60.134 | 47.619 | 0.00 | 0.00 | 0.00 | 3.11 |
63 | 64 | 0.185901 | TCTTGCCCTTTCAGTGCCTT | 59.814 | 50.000 | 0.00 | 0.00 | 0.00 | 4.35 |
65 | 66 | 0.106268 | TTGCCCTTTCAGTGCCTTCA | 60.106 | 50.000 | 0.00 | 0.00 | 0.00 | 3.02 |
77 | 85 | 3.813724 | CAGTGCCTTCATATGGAGTGATG | 59.186 | 47.826 | 10.23 | 0.14 | 0.00 | 3.07 |
80 | 88 | 4.752101 | GTGCCTTCATATGGAGTGATGTAC | 59.248 | 45.833 | 10.23 | 0.97 | 0.00 | 2.90 |
83 | 91 | 5.246203 | GCCTTCATATGGAGTGATGTACCTA | 59.754 | 44.000 | 10.23 | 0.00 | 0.00 | 3.08 |
84 | 92 | 6.573289 | GCCTTCATATGGAGTGATGTACCTAG | 60.573 | 46.154 | 10.23 | 0.00 | 0.00 | 3.02 |
98 | 106 | 4.901868 | TGTACCTAGCGGTGAAAAAGAAT | 58.098 | 39.130 | 0.00 | 0.00 | 45.18 | 2.40 |
155 | 163 | 0.107456 | CATTGGTCGATGAGGAGGGG | 59.893 | 60.000 | 0.00 | 0.00 | 0.00 | 4.79 |
161 | 169 | 2.812619 | CGATGAGGAGGGGGCCTTC | 61.813 | 68.421 | 0.84 | 1.27 | 38.73 | 3.46 |
232 | 240 | 8.902540 | TTCTTCTCTAAATAAACACAGCTTCA | 57.097 | 30.769 | 0.00 | 0.00 | 0.00 | 3.02 |
234 | 242 | 6.706055 | TCTCTAAATAAACACAGCTTCACG | 57.294 | 37.500 | 0.00 | 0.00 | 0.00 | 4.35 |
235 | 243 | 5.637810 | TCTCTAAATAAACACAGCTTCACGG | 59.362 | 40.000 | 0.00 | 0.00 | 0.00 | 4.94 |
236 | 244 | 2.989422 | AATAAACACAGCTTCACGGC | 57.011 | 45.000 | 0.00 | 0.00 | 0.00 | 5.68 |
238 | 246 | 2.823924 | TAAACACAGCTTCACGGCTA | 57.176 | 45.000 | 0.00 | 0.00 | 41.00 | 3.93 |
239 | 247 | 1.512926 | AAACACAGCTTCACGGCTAG | 58.487 | 50.000 | 0.00 | 0.00 | 41.00 | 3.42 |
241 | 249 | 1.374631 | CACAGCTTCACGGCTAGCA | 60.375 | 57.895 | 18.24 | 0.00 | 41.00 | 3.49 |
242 | 250 | 1.079543 | ACAGCTTCACGGCTAGCAG | 60.080 | 57.895 | 18.24 | 15.90 | 41.00 | 4.24 |
247 | 262 | 1.535462 | GCTTCACGGCTAGCAGAAAAA | 59.465 | 47.619 | 22.16 | 10.69 | 37.35 | 1.94 |
249 | 264 | 2.543777 | TCACGGCTAGCAGAAAAACT | 57.456 | 45.000 | 22.16 | 0.00 | 0.00 | 2.66 |
305 | 320 | 3.009301 | ACTTAGACGAATAATCCGGCG | 57.991 | 47.619 | 0.00 | 0.00 | 40.56 | 6.46 |
307 | 322 | 2.983402 | TAGACGAATAATCCGGCGAG | 57.017 | 50.000 | 9.30 | 0.00 | 40.56 | 5.03 |
314 | 329 | 1.399714 | ATAATCCGGCGAGTGTCTGA | 58.600 | 50.000 | 9.30 | 0.00 | 0.00 | 3.27 |
319 | 334 | 1.078759 | CCGGCGAGTGTCTGACATTC | 61.079 | 60.000 | 19.76 | 19.76 | 32.30 | 2.67 |
330 | 345 | 4.919754 | GTGTCTGACATTCTTTGCCATTTC | 59.080 | 41.667 | 14.37 | 0.00 | 0.00 | 2.17 |
334 | 349 | 4.309099 | TGACATTCTTTGCCATTTCTTGC | 58.691 | 39.130 | 0.00 | 0.00 | 0.00 | 4.01 |
345 | 360 | 4.168760 | GCCATTTCTTGCATGTAGTGTTC | 58.831 | 43.478 | 0.00 | 0.00 | 0.00 | 3.18 |
355 | 370 | 4.632688 | TGCATGTAGTGTTCATCATGTCAG | 59.367 | 41.667 | 0.00 | 0.00 | 39.54 | 3.51 |
518 | 539 | 1.002544 | ACCTAAGTGCTGAAGCCACTC | 59.997 | 52.381 | 0.00 | 0.00 | 41.18 | 3.51 |
538 | 560 | 5.416952 | CACTCATGAGCTCAAAATAAAGGGT | 59.583 | 40.000 | 22.50 | 7.89 | 0.00 | 4.34 |
570 | 597 | 2.743636 | TACTTGAAGTCTGAAGCCCG | 57.256 | 50.000 | 0.00 | 0.00 | 0.00 | 6.13 |
716 | 1530 | 3.277142 | ACTTTTACCTATTCCTGGCCG | 57.723 | 47.619 | 0.00 | 0.00 | 0.00 | 6.13 |
732 | 1560 | 3.426615 | TGGCCGTATCATTCCTTTTTGT | 58.573 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
756 | 1584 | 2.639286 | CTTTTCGCGTGCTTGCCT | 59.361 | 55.556 | 5.77 | 0.00 | 0.00 | 4.75 |
985 | 1827 | 8.506168 | TTAACTGTGCTATAAAATAGCTTGCT | 57.494 | 30.769 | 17.29 | 0.00 | 40.95 | 3.91 |
1078 | 1936 | 2.754012 | AGAGGAGACAGATGGAGAGG | 57.246 | 55.000 | 0.00 | 0.00 | 0.00 | 3.69 |
1086 | 1944 | 0.617413 | CAGATGGAGAGGTTGCCTGT | 59.383 | 55.000 | 0.00 | 0.00 | 31.76 | 4.00 |
1198 | 2068 | 6.202570 | GTCTCATGCCATCTAGAGATTTTGTC | 59.797 | 42.308 | 0.00 | 0.00 | 39.13 | 3.18 |
1228 | 2113 | 5.078411 | TCTGCCTGACTGAGAGATTTTAC | 57.922 | 43.478 | 0.00 | 0.00 | 0.00 | 2.01 |
1285 | 2173 | 0.035439 | GAAGACCGAGGCAATCCCAA | 60.035 | 55.000 | 0.00 | 0.00 | 35.39 | 4.12 |
1346 | 2234 | 6.172630 | TCTAGCTATTTGTGTTCATGCAAGA | 58.827 | 36.000 | 0.00 | 0.00 | 0.00 | 3.02 |
1363 | 2251 | 2.086054 | AGAAGCTAGTGGCAGTTTCG | 57.914 | 50.000 | 0.00 | 0.00 | 44.79 | 3.46 |
1443 | 2342 | 1.451747 | GTAGCGGGAGAGGTCGACT | 60.452 | 63.158 | 16.46 | 0.90 | 0.00 | 4.18 |
1563 | 2462 | 4.537688 | AGAGGAGGAATTGAGAACATGGAA | 59.462 | 41.667 | 0.00 | 0.00 | 0.00 | 3.53 |
1833 | 2746 | 4.990426 | CCAAAAATCTCAACGGCTGATTTT | 59.010 | 37.500 | 0.00 | 11.86 | 46.10 | 1.82 |
1846 | 2759 | 3.234386 | GCTGATTTTGTAAAGTGTCGCC | 58.766 | 45.455 | 0.00 | 0.00 | 0.00 | 5.54 |
1868 | 2781 | 5.409826 | GCCGGATCCAGAATTTATAGACTTG | 59.590 | 44.000 | 13.41 | 0.00 | 0.00 | 3.16 |
1894 | 2807 | 3.665745 | GTTGCACTGGAATGGAACATT | 57.334 | 42.857 | 5.41 | 0.00 | 46.74 | 2.71 |
2006 | 2951 | 6.238103 | CGAGCGAGTTTACACAATCCATAATT | 60.238 | 38.462 | 0.00 | 0.00 | 0.00 | 1.40 |
2008 | 2953 | 7.472543 | AGCGAGTTTACACAATCCATAATTTC | 58.527 | 34.615 | 0.00 | 0.00 | 0.00 | 2.17 |
2009 | 2954 | 6.691388 | GCGAGTTTACACAATCCATAATTTCC | 59.309 | 38.462 | 0.00 | 0.00 | 0.00 | 3.13 |
2070 | 3020 | 8.166422 | AGTGTCCATAGAAAAAGTTACTTTGG | 57.834 | 34.615 | 11.35 | 7.91 | 33.64 | 3.28 |
2092 | 3050 | 3.520569 | GTGCCAAAAGTTGTTGTGACAT | 58.479 | 40.909 | 0.00 | 0.00 | 35.29 | 3.06 |
2093 | 3051 | 3.932089 | GTGCCAAAAGTTGTTGTGACATT | 59.068 | 39.130 | 0.00 | 0.00 | 35.29 | 2.71 |
2308 | 3266 | 2.159612 | GGAATTTGCGTACTTTCCGTCC | 60.160 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2309 | 3267 | 1.073177 | ATTTGCGTACTTTCCGTCCG | 58.927 | 50.000 | 0.00 | 0.00 | 0.00 | 4.79 |
2310 | 3268 | 0.031857 | TTTGCGTACTTTCCGTCCGA | 59.968 | 50.000 | 0.00 | 0.00 | 0.00 | 4.55 |
2311 | 3269 | 0.244450 | TTGCGTACTTTCCGTCCGAT | 59.756 | 50.000 | 0.00 | 0.00 | 0.00 | 4.18 |
2312 | 3270 | 1.093972 | TGCGTACTTTCCGTCCGATA | 58.906 | 50.000 | 0.00 | 0.00 | 0.00 | 2.92 |
2313 | 3271 | 1.472082 | TGCGTACTTTCCGTCCGATAA | 59.528 | 47.619 | 0.00 | 0.00 | 0.00 | 1.75 |
2314 | 3272 | 2.094803 | TGCGTACTTTCCGTCCGATAAA | 60.095 | 45.455 | 0.00 | 0.00 | 0.00 | 1.40 |
2315 | 3273 | 2.533129 | GCGTACTTTCCGTCCGATAAAG | 59.467 | 50.000 | 10.78 | 10.78 | 36.51 | 1.85 |
2316 | 3274 | 2.533129 | CGTACTTTCCGTCCGATAAAGC | 59.467 | 50.000 | 11.74 | 0.00 | 34.31 | 3.51 |
2317 | 3275 | 2.019948 | ACTTTCCGTCCGATAAAGCC | 57.980 | 50.000 | 11.74 | 0.00 | 34.31 | 4.35 |
2318 | 3276 | 1.276989 | ACTTTCCGTCCGATAAAGCCA | 59.723 | 47.619 | 11.74 | 0.00 | 34.31 | 4.75 |
2319 | 3277 | 2.093128 | ACTTTCCGTCCGATAAAGCCAT | 60.093 | 45.455 | 11.74 | 0.00 | 34.31 | 4.40 |
2320 | 3278 | 2.702592 | TTCCGTCCGATAAAGCCATT | 57.297 | 45.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2321 | 3279 | 2.702592 | TCCGTCCGATAAAGCCATTT | 57.297 | 45.000 | 0.00 | 0.00 | 0.00 | 2.32 |
2322 | 3280 | 3.823281 | TCCGTCCGATAAAGCCATTTA | 57.177 | 42.857 | 0.00 | 0.00 | 35.41 | 1.40 |
2323 | 3281 | 3.460103 | TCCGTCCGATAAAGCCATTTAC | 58.540 | 45.455 | 0.00 | 0.00 | 33.78 | 2.01 |
2324 | 3282 | 3.118702 | TCCGTCCGATAAAGCCATTTACA | 60.119 | 43.478 | 0.00 | 0.00 | 33.78 | 2.41 |
2325 | 3283 | 3.813166 | CCGTCCGATAAAGCCATTTACAT | 59.187 | 43.478 | 0.00 | 0.00 | 33.78 | 2.29 |
2326 | 3284 | 4.274950 | CCGTCCGATAAAGCCATTTACATT | 59.725 | 41.667 | 0.00 | 0.00 | 33.78 | 2.71 |
2327 | 3285 | 5.440685 | CGTCCGATAAAGCCATTTACATTC | 58.559 | 41.667 | 0.00 | 0.00 | 33.78 | 2.67 |
2328 | 3286 | 5.440685 | GTCCGATAAAGCCATTTACATTCG | 58.559 | 41.667 | 0.00 | 0.00 | 33.78 | 3.34 |
2329 | 3287 | 4.024387 | TCCGATAAAGCCATTTACATTCGC | 60.024 | 41.667 | 0.00 | 0.00 | 33.01 | 4.70 |
2330 | 3288 | 3.900116 | CGATAAAGCCATTTACATTCGCG | 59.100 | 43.478 | 0.00 | 0.00 | 33.78 | 5.87 |
2331 | 3289 | 4.551990 | CGATAAAGCCATTTACATTCGCGT | 60.552 | 41.667 | 5.77 | 0.00 | 33.78 | 6.01 |
2332 | 3290 | 3.569250 | AAAGCCATTTACATTCGCGTT | 57.431 | 38.095 | 5.77 | 0.00 | 0.00 | 4.84 |
2333 | 3291 | 2.825086 | AGCCATTTACATTCGCGTTC | 57.175 | 45.000 | 5.77 | 0.00 | 0.00 | 3.95 |
2334 | 3292 | 1.400494 | AGCCATTTACATTCGCGTTCC | 59.600 | 47.619 | 5.77 | 0.00 | 0.00 | 3.62 |
2335 | 3293 | 1.131504 | GCCATTTACATTCGCGTTCCA | 59.868 | 47.619 | 5.77 | 0.00 | 0.00 | 3.53 |
2336 | 3294 | 2.223479 | GCCATTTACATTCGCGTTCCAT | 60.223 | 45.455 | 5.77 | 0.00 | 0.00 | 3.41 |
2337 | 3295 | 3.617669 | CCATTTACATTCGCGTTCCATC | 58.382 | 45.455 | 5.77 | 0.00 | 0.00 | 3.51 |
2338 | 3296 | 3.548014 | CCATTTACATTCGCGTTCCATCC | 60.548 | 47.826 | 5.77 | 0.00 | 0.00 | 3.51 |
2339 | 3297 | 2.388310 | TTACATTCGCGTTCCATCCA | 57.612 | 45.000 | 5.77 | 0.00 | 0.00 | 3.41 |
2340 | 3298 | 1.647346 | TACATTCGCGTTCCATCCAC | 58.353 | 50.000 | 5.77 | 0.00 | 0.00 | 4.02 |
2341 | 3299 | 0.321210 | ACATTCGCGTTCCATCCACA | 60.321 | 50.000 | 5.77 | 0.00 | 0.00 | 4.17 |
2342 | 3300 | 0.374758 | CATTCGCGTTCCATCCACAG | 59.625 | 55.000 | 5.77 | 0.00 | 0.00 | 3.66 |
2343 | 3301 | 1.369091 | ATTCGCGTTCCATCCACAGC | 61.369 | 55.000 | 5.77 | 0.00 | 0.00 | 4.40 |
2344 | 3302 | 3.853330 | CGCGTTCCATCCACAGCG | 61.853 | 66.667 | 0.00 | 0.00 | 41.56 | 5.18 |
2345 | 3303 | 4.166011 | GCGTTCCATCCACAGCGC | 62.166 | 66.667 | 0.00 | 0.00 | 38.15 | 5.92 |
2346 | 3304 | 3.499737 | CGTTCCATCCACAGCGCC | 61.500 | 66.667 | 2.29 | 0.00 | 0.00 | 6.53 |
2347 | 3305 | 2.359850 | GTTCCATCCACAGCGCCA | 60.360 | 61.111 | 2.29 | 0.00 | 0.00 | 5.69 |
2348 | 3306 | 1.971167 | GTTCCATCCACAGCGCCAA | 60.971 | 57.895 | 2.29 | 0.00 | 0.00 | 4.52 |
2349 | 3307 | 1.001020 | TTCCATCCACAGCGCCAAT | 60.001 | 52.632 | 2.29 | 0.00 | 0.00 | 3.16 |
2350 | 3308 | 1.031571 | TTCCATCCACAGCGCCAATC | 61.032 | 55.000 | 2.29 | 0.00 | 0.00 | 2.67 |
2351 | 3309 | 1.452651 | CCATCCACAGCGCCAATCT | 60.453 | 57.895 | 2.29 | 0.00 | 0.00 | 2.40 |
2352 | 3310 | 1.442526 | CCATCCACAGCGCCAATCTC | 61.443 | 60.000 | 2.29 | 0.00 | 0.00 | 2.75 |
2353 | 3311 | 1.153086 | ATCCACAGCGCCAATCTCC | 60.153 | 57.895 | 2.29 | 0.00 | 0.00 | 3.71 |
2354 | 3312 | 1.913951 | ATCCACAGCGCCAATCTCCA | 61.914 | 55.000 | 2.29 | 0.00 | 0.00 | 3.86 |
2355 | 3313 | 2.401766 | CCACAGCGCCAATCTCCAC | 61.402 | 63.158 | 2.29 | 0.00 | 0.00 | 4.02 |
2356 | 3314 | 2.045926 | ACAGCGCCAATCTCCACC | 60.046 | 61.111 | 2.29 | 0.00 | 0.00 | 4.61 |
2357 | 3315 | 3.197790 | CAGCGCCAATCTCCACCG | 61.198 | 66.667 | 2.29 | 0.00 | 0.00 | 4.94 |
2361 | 3319 | 4.424711 | GCCAATCTCCACCGCCCA | 62.425 | 66.667 | 0.00 | 0.00 | 0.00 | 5.36 |
2362 | 3320 | 2.354729 | CCAATCTCCACCGCCCAA | 59.645 | 61.111 | 0.00 | 0.00 | 0.00 | 4.12 |
2363 | 3321 | 1.304052 | CCAATCTCCACCGCCCAAA | 60.304 | 57.895 | 0.00 | 0.00 | 0.00 | 3.28 |
2364 | 3322 | 0.897863 | CCAATCTCCACCGCCCAAAA | 60.898 | 55.000 | 0.00 | 0.00 | 0.00 | 2.44 |
2365 | 3323 | 0.243636 | CAATCTCCACCGCCCAAAAC | 59.756 | 55.000 | 0.00 | 0.00 | 0.00 | 2.43 |
2366 | 3324 | 0.112412 | AATCTCCACCGCCCAAAACT | 59.888 | 50.000 | 0.00 | 0.00 | 0.00 | 2.66 |
2367 | 3325 | 0.609131 | ATCTCCACCGCCCAAAACTG | 60.609 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2368 | 3326 | 2.909965 | TCCACCGCCCAAAACTGC | 60.910 | 61.111 | 0.00 | 0.00 | 0.00 | 4.40 |
2369 | 3327 | 2.912025 | CCACCGCCCAAAACTGCT | 60.912 | 61.111 | 0.00 | 0.00 | 0.00 | 4.24 |
2370 | 3328 | 2.644992 | CACCGCCCAAAACTGCTC | 59.355 | 61.111 | 0.00 | 0.00 | 0.00 | 4.26 |
2371 | 3329 | 2.192861 | CACCGCCCAAAACTGCTCA | 61.193 | 57.895 | 0.00 | 0.00 | 0.00 | 4.26 |
2372 | 3330 | 1.228552 | ACCGCCCAAAACTGCTCAT | 60.229 | 52.632 | 0.00 | 0.00 | 0.00 | 2.90 |
2373 | 3331 | 1.213537 | CCGCCCAAAACTGCTCATG | 59.786 | 57.895 | 0.00 | 0.00 | 0.00 | 3.07 |
2374 | 3332 | 1.243342 | CCGCCCAAAACTGCTCATGA | 61.243 | 55.000 | 0.00 | 0.00 | 0.00 | 3.07 |
2375 | 3333 | 0.813184 | CGCCCAAAACTGCTCATGAT | 59.187 | 50.000 | 0.00 | 0.00 | 0.00 | 2.45 |
2376 | 3334 | 1.202222 | CGCCCAAAACTGCTCATGATC | 60.202 | 52.381 | 0.00 | 0.00 | 0.00 | 2.92 |
2377 | 3335 | 1.202222 | GCCCAAAACTGCTCATGATCG | 60.202 | 52.381 | 0.00 | 0.00 | 0.00 | 3.69 |
2378 | 3336 | 2.358957 | CCCAAAACTGCTCATGATCGA | 58.641 | 47.619 | 0.00 | 0.00 | 0.00 | 3.59 |
2379 | 3337 | 2.749076 | CCCAAAACTGCTCATGATCGAA | 59.251 | 45.455 | 0.00 | 0.00 | 0.00 | 3.71 |
2380 | 3338 | 3.191162 | CCCAAAACTGCTCATGATCGAAA | 59.809 | 43.478 | 0.00 | 0.00 | 0.00 | 3.46 |
2381 | 3339 | 4.409570 | CCAAAACTGCTCATGATCGAAAG | 58.590 | 43.478 | 0.00 | 0.00 | 0.00 | 2.62 |
2396 | 3354 | 4.934075 | TCGAAAGATGCATGTGAGAAAG | 57.066 | 40.909 | 2.46 | 0.00 | 33.31 | 2.62 |
2397 | 3355 | 3.125829 | TCGAAAGATGCATGTGAGAAAGC | 59.874 | 43.478 | 2.46 | 0.00 | 33.31 | 3.51 |
2398 | 3356 | 3.126514 | CGAAAGATGCATGTGAGAAAGCT | 59.873 | 43.478 | 2.46 | 0.00 | 0.00 | 3.74 |
2399 | 3357 | 4.413087 | GAAAGATGCATGTGAGAAAGCTG | 58.587 | 43.478 | 2.46 | 0.00 | 0.00 | 4.24 |
2400 | 3358 | 3.345508 | AGATGCATGTGAGAAAGCTGA | 57.654 | 42.857 | 2.46 | 0.00 | 0.00 | 4.26 |
2401 | 3359 | 3.008330 | AGATGCATGTGAGAAAGCTGAC | 58.992 | 45.455 | 2.46 | 0.00 | 0.00 | 3.51 |
2402 | 3360 | 2.259266 | TGCATGTGAGAAAGCTGACA | 57.741 | 45.000 | 0.00 | 0.00 | 42.41 | 3.58 |
2404 | 3362 | 3.151554 | TGCATGTGAGAAAGCTGACATT | 58.848 | 40.909 | 0.00 | 0.00 | 44.95 | 2.71 |
2405 | 3363 | 3.057806 | TGCATGTGAGAAAGCTGACATTG | 60.058 | 43.478 | 0.00 | 0.00 | 44.95 | 2.82 |
2406 | 3364 | 3.672511 | GCATGTGAGAAAGCTGACATTGG | 60.673 | 47.826 | 0.00 | 0.00 | 44.95 | 3.16 |
2407 | 3365 | 1.881973 | TGTGAGAAAGCTGACATTGGC | 59.118 | 47.619 | 0.00 | 0.00 | 33.17 | 4.52 |
2408 | 3366 | 1.881973 | GTGAGAAAGCTGACATTGGCA | 59.118 | 47.619 | 0.00 | 0.00 | 0.00 | 4.92 |
2409 | 3367 | 2.490903 | GTGAGAAAGCTGACATTGGCAT | 59.509 | 45.455 | 0.00 | 0.00 | 0.00 | 4.40 |
2410 | 3368 | 2.751259 | TGAGAAAGCTGACATTGGCATC | 59.249 | 45.455 | 0.00 | 0.00 | 0.00 | 3.91 |
2411 | 3369 | 3.015327 | GAGAAAGCTGACATTGGCATCT | 58.985 | 45.455 | 0.00 | 0.00 | 32.45 | 2.90 |
2412 | 3370 | 2.753452 | AGAAAGCTGACATTGGCATCTG | 59.247 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
2413 | 3371 | 0.815734 | AAGCTGACATTGGCATCTGC | 59.184 | 50.000 | 9.60 | 9.60 | 39.38 | 4.26 |
2414 | 3372 | 0.323087 | AGCTGACATTGGCATCTGCA | 60.323 | 50.000 | 17.13 | 7.49 | 44.36 | 4.41 |
2415 | 3373 | 0.528924 | GCTGACATTGGCATCTGCAA | 59.471 | 50.000 | 11.95 | 0.00 | 44.36 | 4.08 |
2416 | 3374 | 1.734707 | GCTGACATTGGCATCTGCAAC | 60.735 | 52.381 | 11.95 | 0.50 | 44.36 | 4.17 |
2417 | 3375 | 0.889994 | TGACATTGGCATCTGCAACC | 59.110 | 50.000 | 4.33 | 0.00 | 44.36 | 3.77 |
2418 | 3376 | 0.179156 | GACATTGGCATCTGCAACCG | 60.179 | 55.000 | 4.33 | 0.00 | 44.36 | 4.44 |
2419 | 3377 | 0.895100 | ACATTGGCATCTGCAACCGT | 60.895 | 50.000 | 4.33 | 0.00 | 44.36 | 4.83 |
2420 | 3378 | 0.457166 | CATTGGCATCTGCAACCGTG | 60.457 | 55.000 | 4.33 | 0.00 | 44.36 | 4.94 |
2421 | 3379 | 0.895100 | ATTGGCATCTGCAACCGTGT | 60.895 | 50.000 | 4.33 | 0.00 | 44.36 | 4.49 |
2422 | 3380 | 1.514678 | TTGGCATCTGCAACCGTGTC | 61.515 | 55.000 | 4.33 | 0.00 | 44.36 | 3.67 |
2423 | 3381 | 2.690778 | GGCATCTGCAACCGTGTCC | 61.691 | 63.158 | 4.33 | 0.00 | 44.36 | 4.02 |
2424 | 3382 | 1.672356 | GCATCTGCAACCGTGTCCT | 60.672 | 57.895 | 0.00 | 0.00 | 41.59 | 3.85 |
2425 | 3383 | 1.237285 | GCATCTGCAACCGTGTCCTT | 61.237 | 55.000 | 0.00 | 0.00 | 41.59 | 3.36 |
2426 | 3384 | 0.798776 | CATCTGCAACCGTGTCCTTC | 59.201 | 55.000 | 0.00 | 0.00 | 0.00 | 3.46 |
2427 | 3385 | 0.687354 | ATCTGCAACCGTGTCCTTCT | 59.313 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
2428 | 3386 | 0.033504 | TCTGCAACCGTGTCCTTCTC | 59.966 | 55.000 | 0.00 | 0.00 | 0.00 | 2.87 |
2429 | 3387 | 0.034059 | CTGCAACCGTGTCCTTCTCT | 59.966 | 55.000 | 0.00 | 0.00 | 0.00 | 3.10 |
2430 | 3388 | 0.468226 | TGCAACCGTGTCCTTCTCTT | 59.532 | 50.000 | 0.00 | 0.00 | 0.00 | 2.85 |
2431 | 3389 | 1.134220 | TGCAACCGTGTCCTTCTCTTT | 60.134 | 47.619 | 0.00 | 0.00 | 0.00 | 2.52 |
2432 | 3390 | 1.531578 | GCAACCGTGTCCTTCTCTTTC | 59.468 | 52.381 | 0.00 | 0.00 | 0.00 | 2.62 |
2433 | 3391 | 1.792949 | CAACCGTGTCCTTCTCTTTCG | 59.207 | 52.381 | 0.00 | 0.00 | 0.00 | 3.46 |
2434 | 3392 | 0.319641 | ACCGTGTCCTTCTCTTTCGC | 60.320 | 55.000 | 0.00 | 0.00 | 0.00 | 4.70 |
2435 | 3393 | 0.319555 | CCGTGTCCTTCTCTTTCGCA | 60.320 | 55.000 | 0.00 | 0.00 | 0.00 | 5.10 |
2436 | 3394 | 1.673033 | CCGTGTCCTTCTCTTTCGCAT | 60.673 | 52.381 | 0.00 | 0.00 | 0.00 | 4.73 |
2437 | 3395 | 1.391485 | CGTGTCCTTCTCTTTCGCATG | 59.609 | 52.381 | 0.00 | 0.00 | 0.00 | 4.06 |
2438 | 3396 | 1.129437 | GTGTCCTTCTCTTTCGCATGC | 59.871 | 52.381 | 7.91 | 7.91 | 0.00 | 4.06 |
2439 | 3397 | 1.270785 | TGTCCTTCTCTTTCGCATGCA | 60.271 | 47.619 | 19.57 | 1.73 | 0.00 | 3.96 |
2440 | 3398 | 2.012673 | GTCCTTCTCTTTCGCATGCAT | 58.987 | 47.619 | 19.57 | 0.00 | 0.00 | 3.96 |
2441 | 3399 | 2.011947 | TCCTTCTCTTTCGCATGCATG | 58.988 | 47.619 | 22.70 | 22.70 | 0.00 | 4.06 |
2453 | 3411 | 1.888215 | CATGCATGCCAGGTAGTAGG | 58.112 | 55.000 | 14.93 | 0.00 | 0.00 | 3.18 |
2454 | 3412 | 1.141657 | CATGCATGCCAGGTAGTAGGT | 59.858 | 52.381 | 14.93 | 0.00 | 0.00 | 3.08 |
2455 | 3413 | 0.541392 | TGCATGCCAGGTAGTAGGTG | 59.459 | 55.000 | 16.68 | 0.00 | 0.00 | 4.00 |
2456 | 3414 | 0.815615 | GCATGCCAGGTAGTAGGTGC | 60.816 | 60.000 | 6.36 | 0.00 | 0.00 | 5.01 |
2457 | 3415 | 0.530650 | CATGCCAGGTAGTAGGTGCG | 60.531 | 60.000 | 0.00 | 0.00 | 0.00 | 5.34 |
2458 | 3416 | 1.686325 | ATGCCAGGTAGTAGGTGCGG | 61.686 | 60.000 | 0.00 | 0.00 | 0.00 | 5.69 |
2459 | 3417 | 2.056223 | GCCAGGTAGTAGGTGCGGA | 61.056 | 63.158 | 0.00 | 0.00 | 0.00 | 5.54 |
2460 | 3418 | 1.400530 | GCCAGGTAGTAGGTGCGGAT | 61.401 | 60.000 | 0.00 | 0.00 | 0.00 | 4.18 |
2461 | 3419 | 1.991121 | CCAGGTAGTAGGTGCGGATA | 58.009 | 55.000 | 0.00 | 0.00 | 0.00 | 2.59 |
2462 | 3420 | 1.887198 | CCAGGTAGTAGGTGCGGATAG | 59.113 | 57.143 | 0.00 | 0.00 | 0.00 | 2.08 |
2463 | 3421 | 1.887198 | CAGGTAGTAGGTGCGGATAGG | 59.113 | 57.143 | 0.00 | 0.00 | 0.00 | 2.57 |
2464 | 3422 | 1.498145 | AGGTAGTAGGTGCGGATAGGT | 59.502 | 52.381 | 0.00 | 0.00 | 0.00 | 3.08 |
2465 | 3423 | 1.612463 | GGTAGTAGGTGCGGATAGGTG | 59.388 | 57.143 | 0.00 | 0.00 | 0.00 | 4.00 |
2466 | 3424 | 1.000496 | GTAGTAGGTGCGGATAGGTGC | 60.000 | 57.143 | 0.00 | 0.00 | 0.00 | 5.01 |
2467 | 3425 | 0.397254 | AGTAGGTGCGGATAGGTGCT | 60.397 | 55.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2468 | 3426 | 1.133575 | AGTAGGTGCGGATAGGTGCTA | 60.134 | 52.381 | 0.00 | 0.00 | 0.00 | 3.49 |
2469 | 3427 | 1.000496 | GTAGGTGCGGATAGGTGCTAC | 60.000 | 57.143 | 0.00 | 0.00 | 0.00 | 3.58 |
2470 | 3428 | 0.397254 | AGGTGCGGATAGGTGCTACT | 60.397 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2471 | 3429 | 0.032267 | GGTGCGGATAGGTGCTACTC | 59.968 | 60.000 | 0.00 | 0.00 | 0.00 | 2.59 |
2472 | 3430 | 0.032267 | GTGCGGATAGGTGCTACTCC | 59.968 | 60.000 | 0.00 | 0.00 | 0.00 | 3.85 |
2473 | 3431 | 1.113517 | TGCGGATAGGTGCTACTCCC | 61.114 | 60.000 | 0.00 | 0.00 | 0.00 | 4.30 |
2474 | 3432 | 0.828343 | GCGGATAGGTGCTACTCCCT | 60.828 | 60.000 | 0.00 | 0.00 | 34.74 | 4.20 |
2475 | 3433 | 1.705873 | CGGATAGGTGCTACTCCCTT | 58.294 | 55.000 | 0.00 | 0.00 | 32.08 | 3.95 |
2476 | 3434 | 1.614413 | CGGATAGGTGCTACTCCCTTC | 59.386 | 57.143 | 0.00 | 0.00 | 32.08 | 3.46 |
2477 | 3435 | 1.614413 | GGATAGGTGCTACTCCCTTCG | 59.386 | 57.143 | 0.00 | 0.00 | 32.08 | 3.79 |
2478 | 3436 | 2.308690 | GATAGGTGCTACTCCCTTCGT | 58.691 | 52.381 | 0.00 | 0.00 | 32.08 | 3.85 |
2479 | 3437 | 2.226962 | TAGGTGCTACTCCCTTCGTT | 57.773 | 50.000 | 0.00 | 0.00 | 32.08 | 3.85 |
2480 | 3438 | 0.896226 | AGGTGCTACTCCCTTCGTTC | 59.104 | 55.000 | 0.00 | 0.00 | 0.00 | 3.95 |
2481 | 3439 | 0.896226 | GGTGCTACTCCCTTCGTTCT | 59.104 | 55.000 | 0.00 | 0.00 | 0.00 | 3.01 |
2482 | 3440 | 2.097825 | GGTGCTACTCCCTTCGTTCTA | 58.902 | 52.381 | 0.00 | 0.00 | 0.00 | 2.10 |
2483 | 3441 | 2.494870 | GGTGCTACTCCCTTCGTTCTAA | 59.505 | 50.000 | 0.00 | 0.00 | 0.00 | 2.10 |
2484 | 3442 | 3.056322 | GGTGCTACTCCCTTCGTTCTAAA | 60.056 | 47.826 | 0.00 | 0.00 | 0.00 | 1.85 |
2485 | 3443 | 4.562143 | GGTGCTACTCCCTTCGTTCTAAAA | 60.562 | 45.833 | 0.00 | 0.00 | 0.00 | 1.52 |
2486 | 3444 | 5.176592 | GTGCTACTCCCTTCGTTCTAAAAT | 58.823 | 41.667 | 0.00 | 0.00 | 0.00 | 1.82 |
2487 | 3445 | 6.335777 | GTGCTACTCCCTTCGTTCTAAAATA | 58.664 | 40.000 | 0.00 | 0.00 | 0.00 | 1.40 |
2488 | 3446 | 6.476053 | GTGCTACTCCCTTCGTTCTAAAATAG | 59.524 | 42.308 | 0.00 | 0.00 | 0.00 | 1.73 |
2489 | 3447 | 6.379133 | TGCTACTCCCTTCGTTCTAAAATAGA | 59.621 | 38.462 | 0.00 | 0.00 | 0.00 | 1.98 |
2490 | 3448 | 7.069578 | TGCTACTCCCTTCGTTCTAAAATAGAT | 59.930 | 37.037 | 0.00 | 0.00 | 34.22 | 1.98 |
2491 | 3449 | 7.382759 | GCTACTCCCTTCGTTCTAAAATAGATG | 59.617 | 40.741 | 0.00 | 0.00 | 34.22 | 2.90 |
2492 | 3450 | 7.419711 | ACTCCCTTCGTTCTAAAATAGATGA | 57.580 | 36.000 | 0.00 | 0.00 | 34.22 | 2.92 |
2493 | 3451 | 7.266400 | ACTCCCTTCGTTCTAAAATAGATGAC | 58.734 | 38.462 | 0.00 | 0.00 | 34.22 | 3.06 |
2494 | 3452 | 7.124448 | ACTCCCTTCGTTCTAAAATAGATGACT | 59.876 | 37.037 | 0.00 | 0.00 | 34.22 | 3.41 |
2495 | 3453 | 7.490000 | TCCCTTCGTTCTAAAATAGATGACTC | 58.510 | 38.462 | 0.00 | 0.00 | 34.22 | 3.36 |
2496 | 3454 | 7.123697 | TCCCTTCGTTCTAAAATAGATGACTCA | 59.876 | 37.037 | 0.00 | 0.00 | 34.22 | 3.41 |
2497 | 3455 | 7.764443 | CCCTTCGTTCTAAAATAGATGACTCAA | 59.236 | 37.037 | 0.00 | 0.00 | 34.22 | 3.02 |
2498 | 3456 | 8.596380 | CCTTCGTTCTAAAATAGATGACTCAAC | 58.404 | 37.037 | 0.00 | 0.00 | 34.22 | 3.18 |
2499 | 3457 | 9.360093 | CTTCGTTCTAAAATAGATGACTCAACT | 57.640 | 33.333 | 0.00 | 0.00 | 34.22 | 3.16 |
2500 | 3458 | 9.706691 | TTCGTTCTAAAATAGATGACTCAACTT | 57.293 | 29.630 | 0.00 | 0.00 | 34.22 | 2.66 |
2501 | 3459 | 9.706691 | TCGTTCTAAAATAGATGACTCAACTTT | 57.293 | 29.630 | 0.00 | 0.00 | 34.22 | 2.66 |
2502 | 3460 | 9.746711 | CGTTCTAAAATAGATGACTCAACTTTG | 57.253 | 33.333 | 0.00 | 0.00 | 34.22 | 2.77 |
2513 | 3471 | 9.046296 | AGATGACTCAACTTTGTACTAACTTTG | 57.954 | 33.333 | 0.00 | 0.00 | 0.00 | 2.77 |
2514 | 3472 | 8.732746 | ATGACTCAACTTTGTACTAACTTTGT | 57.267 | 30.769 | 0.00 | 0.00 | 0.00 | 2.83 |
2515 | 3473 | 9.826574 | ATGACTCAACTTTGTACTAACTTTGTA | 57.173 | 29.630 | 0.00 | 0.00 | 0.00 | 2.41 |
2516 | 3474 | 9.090692 | TGACTCAACTTTGTACTAACTTTGTAC | 57.909 | 33.333 | 6.58 | 6.58 | 40.27 | 2.90 |
2517 | 3475 | 9.310716 | GACTCAACTTTGTACTAACTTTGTACT | 57.689 | 33.333 | 12.73 | 0.00 | 40.44 | 2.73 |
2540 | 3498 | 7.723324 | ACTAAAACTAGTACAAAGCTGAGTCA | 58.277 | 34.615 | 0.00 | 0.00 | 0.00 | 3.41 |
2541 | 3499 | 8.368668 | ACTAAAACTAGTACAAAGCTGAGTCAT | 58.631 | 33.333 | 0.00 | 0.00 | 0.00 | 3.06 |
2542 | 3500 | 7.659652 | AAAACTAGTACAAAGCTGAGTCATC | 57.340 | 36.000 | 0.00 | 0.00 | 0.00 | 2.92 |
2543 | 3501 | 6.597832 | AACTAGTACAAAGCTGAGTCATCT | 57.402 | 37.500 | 0.00 | 0.00 | 0.00 | 2.90 |
2544 | 3502 | 7.704578 | AACTAGTACAAAGCTGAGTCATCTA | 57.295 | 36.000 | 0.00 | 0.00 | 0.00 | 1.98 |
2545 | 3503 | 7.889873 | ACTAGTACAAAGCTGAGTCATCTAT | 57.110 | 36.000 | 0.00 | 0.00 | 0.00 | 1.98 |
2546 | 3504 | 8.299990 | ACTAGTACAAAGCTGAGTCATCTATT | 57.700 | 34.615 | 0.00 | 0.00 | 0.00 | 1.73 |
2547 | 3505 | 8.754080 | ACTAGTACAAAGCTGAGTCATCTATTT | 58.246 | 33.333 | 0.00 | 0.00 | 0.00 | 1.40 |
2548 | 3506 | 9.593134 | CTAGTACAAAGCTGAGTCATCTATTTT | 57.407 | 33.333 | 0.00 | 0.00 | 0.00 | 1.82 |
2549 | 3507 | 8.261492 | AGTACAAAGCTGAGTCATCTATTTTG | 57.739 | 34.615 | 0.00 | 1.63 | 0.00 | 2.44 |
2550 | 3508 | 6.506500 | ACAAAGCTGAGTCATCTATTTTGG | 57.493 | 37.500 | 10.21 | 0.00 | 30.60 | 3.28 |
2551 | 3509 | 6.240894 | ACAAAGCTGAGTCATCTATTTTGGA | 58.759 | 36.000 | 10.21 | 0.00 | 30.60 | 3.53 |
2552 | 3510 | 6.716628 | ACAAAGCTGAGTCATCTATTTTGGAA | 59.283 | 34.615 | 10.21 | 0.00 | 30.60 | 3.53 |
2553 | 3511 | 6.749923 | AAGCTGAGTCATCTATTTTGGAAC | 57.250 | 37.500 | 0.00 | 0.00 | 0.00 | 3.62 |
2554 | 3512 | 4.872691 | AGCTGAGTCATCTATTTTGGAACG | 59.127 | 41.667 | 0.00 | 0.00 | 0.00 | 3.95 |
2555 | 3513 | 4.034510 | GCTGAGTCATCTATTTTGGAACGG | 59.965 | 45.833 | 0.00 | 0.00 | 0.00 | 4.44 |
2556 | 3514 | 5.414789 | TGAGTCATCTATTTTGGAACGGA | 57.585 | 39.130 | 0.00 | 0.00 | 0.00 | 4.69 |
2557 | 3515 | 5.419542 | TGAGTCATCTATTTTGGAACGGAG | 58.580 | 41.667 | 0.00 | 0.00 | 0.00 | 4.63 |
2558 | 3516 | 4.770795 | AGTCATCTATTTTGGAACGGAGG | 58.229 | 43.478 | 0.00 | 0.00 | 0.00 | 4.30 |
2559 | 3517 | 3.877508 | GTCATCTATTTTGGAACGGAGGG | 59.122 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
2560 | 3518 | 3.778075 | TCATCTATTTTGGAACGGAGGGA | 59.222 | 43.478 | 0.00 | 0.00 | 0.00 | 4.20 |
2561 | 3519 | 3.906720 | TCTATTTTGGAACGGAGGGAG | 57.093 | 47.619 | 0.00 | 0.00 | 0.00 | 4.30 |
2562 | 3520 | 3.178865 | TCTATTTTGGAACGGAGGGAGT | 58.821 | 45.455 | 0.00 | 0.00 | 0.00 | 3.85 |
2563 | 3521 | 4.355549 | TCTATTTTGGAACGGAGGGAGTA | 58.644 | 43.478 | 0.00 | 0.00 | 0.00 | 2.59 |
2564 | 3522 | 3.629142 | ATTTTGGAACGGAGGGAGTAG | 57.371 | 47.619 | 0.00 | 0.00 | 0.00 | 2.57 |
2565 | 3523 | 2.314071 | TTTGGAACGGAGGGAGTAGA | 57.686 | 50.000 | 0.00 | 0.00 | 0.00 | 2.59 |
2566 | 3524 | 2.544844 | TTGGAACGGAGGGAGTAGAT | 57.455 | 50.000 | 0.00 | 0.00 | 0.00 | 1.98 |
2567 | 3525 | 2.544844 | TGGAACGGAGGGAGTAGATT | 57.455 | 50.000 | 0.00 | 0.00 | 0.00 | 2.40 |
2568 | 3526 | 2.385803 | TGGAACGGAGGGAGTAGATTC | 58.614 | 52.381 | 0.00 | 0.00 | 0.00 | 2.52 |
2569 | 3527 | 2.024273 | TGGAACGGAGGGAGTAGATTCT | 60.024 | 50.000 | 0.00 | 0.00 | 0.00 | 2.40 |
2570 | 3528 | 3.032459 | GGAACGGAGGGAGTAGATTCTT | 58.968 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
2571 | 3529 | 3.181474 | GGAACGGAGGGAGTAGATTCTTG | 60.181 | 52.174 | 0.00 | 0.00 | 0.00 | 3.02 |
2572 | 3530 | 1.757699 | ACGGAGGGAGTAGATTCTTGC | 59.242 | 52.381 | 0.00 | 0.00 | 0.00 | 4.01 |
2573 | 3531 | 1.757118 | CGGAGGGAGTAGATTCTTGCA | 59.243 | 52.381 | 0.00 | 0.00 | 0.00 | 4.08 |
2574 | 3532 | 2.366916 | CGGAGGGAGTAGATTCTTGCAT | 59.633 | 50.000 | 0.00 | 0.00 | 0.00 | 3.96 |
2575 | 3533 | 3.737850 | GGAGGGAGTAGATTCTTGCATG | 58.262 | 50.000 | 0.00 | 0.00 | 0.00 | 4.06 |
2576 | 3534 | 3.135530 | GGAGGGAGTAGATTCTTGCATGT | 59.864 | 47.826 | 0.00 | 0.00 | 0.00 | 3.21 |
2577 | 3535 | 4.376146 | GAGGGAGTAGATTCTTGCATGTC | 58.624 | 47.826 | 0.00 | 0.00 | 0.00 | 3.06 |
2578 | 3536 | 3.135530 | AGGGAGTAGATTCTTGCATGTCC | 59.864 | 47.826 | 0.00 | 0.00 | 0.00 | 4.02 |
2579 | 3537 | 3.118261 | GGGAGTAGATTCTTGCATGTCCA | 60.118 | 47.826 | 0.00 | 0.00 | 0.00 | 4.02 |
2580 | 3538 | 4.125703 | GGAGTAGATTCTTGCATGTCCAG | 58.874 | 47.826 | 0.00 | 0.00 | 0.00 | 3.86 |
2581 | 3539 | 3.539604 | AGTAGATTCTTGCATGTCCAGC | 58.460 | 45.455 | 0.00 | 0.00 | 0.00 | 4.85 |
Position | MSA Position | Penalty | Sequence | TM | GC | Self any TH | Self end TH | Hairpin | End Stability |
---|---|---|---|---|---|---|---|---|---|
0 | 1 | 3.892284 | TGGTTAAGCAGGTTCAGTTTCA | 58.108 | 40.909 | 2.54 | 0.00 | 0.00 | 2.69 |
21 | 22 | 5.171339 | ACAGCAGAGTGAATTAAGGTCAT | 57.829 | 39.130 | 0.00 | 0.00 | 0.00 | 3.06 |
23 | 24 | 5.241662 | AGAACAGCAGAGTGAATTAAGGTC | 58.758 | 41.667 | 0.00 | 0.00 | 0.00 | 3.85 |
29 | 30 | 2.555757 | GGCAAGAACAGCAGAGTGAATT | 59.444 | 45.455 | 0.00 | 0.00 | 0.00 | 2.17 |
54 | 55 | 3.106827 | TCACTCCATATGAAGGCACTGA | 58.893 | 45.455 | 3.65 | 0.00 | 40.86 | 3.41 |
63 | 64 | 4.459337 | CGCTAGGTACATCACTCCATATGA | 59.541 | 45.833 | 3.65 | 0.00 | 0.00 | 2.15 |
65 | 66 | 3.764434 | CCGCTAGGTACATCACTCCATAT | 59.236 | 47.826 | 0.00 | 0.00 | 0.00 | 1.78 |
80 | 88 | 5.873179 | TGTAATTCTTTTTCACCGCTAGG | 57.127 | 39.130 | 0.00 | 0.00 | 45.13 | 3.02 |
83 | 91 | 4.142687 | CCGATGTAATTCTTTTTCACCGCT | 60.143 | 41.667 | 0.00 | 0.00 | 0.00 | 5.52 |
84 | 92 | 4.095610 | CCGATGTAATTCTTTTTCACCGC | 58.904 | 43.478 | 0.00 | 0.00 | 0.00 | 5.68 |
98 | 106 | 0.108186 | CACTGCTGGAGCCGATGTAA | 60.108 | 55.000 | 0.00 | 0.00 | 41.18 | 2.41 |
206 | 214 | 9.507329 | TGAAGCTGTGTTTATTTAGAGAAGAAT | 57.493 | 29.630 | 0.00 | 0.00 | 0.00 | 2.40 |
230 | 238 | 2.143122 | CAGTTTTTCTGCTAGCCGTGA | 58.857 | 47.619 | 13.29 | 5.16 | 37.36 | 4.35 |
231 | 239 | 2.143122 | TCAGTTTTTCTGCTAGCCGTG | 58.857 | 47.619 | 13.29 | 2.57 | 43.32 | 4.94 |
232 | 240 | 2.417719 | CTCAGTTTTTCTGCTAGCCGT | 58.582 | 47.619 | 13.29 | 0.00 | 43.32 | 5.68 |
234 | 242 | 2.154462 | TGCTCAGTTTTTCTGCTAGCC | 58.846 | 47.619 | 13.29 | 0.00 | 40.84 | 3.93 |
235 | 243 | 3.365767 | CCTTGCTCAGTTTTTCTGCTAGC | 60.366 | 47.826 | 8.10 | 8.10 | 43.32 | 3.42 |
236 | 244 | 3.365767 | GCCTTGCTCAGTTTTTCTGCTAG | 60.366 | 47.826 | 0.00 | 0.00 | 43.32 | 3.42 |
238 | 246 | 1.339291 | GCCTTGCTCAGTTTTTCTGCT | 59.661 | 47.619 | 0.00 | 0.00 | 43.32 | 4.24 |
239 | 247 | 1.603931 | GGCCTTGCTCAGTTTTTCTGC | 60.604 | 52.381 | 0.00 | 0.00 | 43.32 | 4.26 |
241 | 249 | 0.954452 | CGGCCTTGCTCAGTTTTTCT | 59.046 | 50.000 | 0.00 | 0.00 | 0.00 | 2.52 |
242 | 250 | 0.664466 | GCGGCCTTGCTCAGTTTTTC | 60.664 | 55.000 | 0.00 | 0.00 | 0.00 | 2.29 |
247 | 262 | 2.670934 | CAAGCGGCCTTGCTCAGT | 60.671 | 61.111 | 5.54 | 0.00 | 46.60 | 3.41 |
249 | 264 | 2.359107 | CTCAAGCGGCCTTGCTCA | 60.359 | 61.111 | 5.54 | 0.00 | 46.60 | 4.26 |
252 | 267 | 3.435186 | GGACTCAAGCGGCCTTGC | 61.435 | 66.667 | 0.00 | 0.00 | 46.38 | 4.01 |
295 | 310 | 1.067212 | GTCAGACACTCGCCGGATTAT | 59.933 | 52.381 | 5.05 | 0.00 | 0.00 | 1.28 |
298 | 313 | 1.323271 | ATGTCAGACACTCGCCGGAT | 61.323 | 55.000 | 5.05 | 0.00 | 0.00 | 4.18 |
305 | 320 | 3.141398 | TGGCAAAGAATGTCAGACACTC | 58.859 | 45.455 | 5.05 | 4.31 | 39.16 | 3.51 |
314 | 329 | 4.339872 | TGCAAGAAATGGCAAAGAATGT | 57.660 | 36.364 | 0.00 | 0.00 | 37.03 | 2.71 |
319 | 334 | 4.624024 | CACTACATGCAAGAAATGGCAAAG | 59.376 | 41.667 | 0.00 | 0.00 | 44.20 | 2.77 |
330 | 345 | 5.122711 | TGACATGATGAACACTACATGCAAG | 59.877 | 40.000 | 0.00 | 0.00 | 42.28 | 4.01 |
334 | 349 | 6.104665 | AGTCTGACATGATGAACACTACATG | 58.895 | 40.000 | 10.88 | 0.00 | 43.56 | 3.21 |
345 | 360 | 6.629128 | AGTTTGTCTCTAGTCTGACATGATG | 58.371 | 40.000 | 10.88 | 0.00 | 41.93 | 3.07 |
355 | 370 | 6.362820 | CCTAACGTCAAAGTTTGTCTCTAGTC | 59.637 | 42.308 | 15.08 | 0.00 | 35.70 | 2.59 |
518 | 539 | 4.706476 | TGGACCCTTTATTTTGAGCTCATG | 59.294 | 41.667 | 19.04 | 2.34 | 0.00 | 3.07 |
538 | 560 | 8.262227 | TCAGACTTCAAGTAAACTAAAGTTGGA | 58.738 | 33.333 | 10.45 | 8.96 | 38.44 | 3.53 |
716 | 1530 | 4.421058 | GGGCGAACAAAAAGGAATGATAC | 58.579 | 43.478 | 0.00 | 0.00 | 0.00 | 2.24 |
756 | 1584 | 2.809119 | TGAAAACTCGGCGAATTGCTAA | 59.191 | 40.909 | 12.13 | 0.00 | 45.43 | 3.09 |
985 | 1827 | 1.833630 | CTCATGTAGAGGGCCTGAACA | 59.166 | 52.381 | 12.95 | 15.81 | 40.84 | 3.18 |
1198 | 2068 | 4.763073 | TCTCAGTCAGGCAGAACAATATG | 58.237 | 43.478 | 0.00 | 0.00 | 0.00 | 1.78 |
1228 | 2113 | 1.303799 | GCCGCTGATGCATATGGGAG | 61.304 | 60.000 | 0.00 | 0.21 | 39.64 | 4.30 |
1346 | 2234 | 0.685097 | TCCGAAACTGCCACTAGCTT | 59.315 | 50.000 | 0.00 | 0.00 | 44.23 | 3.74 |
1363 | 2251 | 2.504367 | ACAGTTTGCACAGTATGGTCC | 58.496 | 47.619 | 0.00 | 0.00 | 43.62 | 4.46 |
1401 | 2297 | 1.427368 | AGCCTGGGGTGAACATAACAA | 59.573 | 47.619 | 0.00 | 0.00 | 0.00 | 2.83 |
1402 | 2298 | 1.072266 | AGCCTGGGGTGAACATAACA | 58.928 | 50.000 | 0.00 | 0.00 | 0.00 | 2.41 |
1403 | 2299 | 1.271926 | ACAGCCTGGGGTGAACATAAC | 60.272 | 52.381 | 23.20 | 0.00 | 45.42 | 1.89 |
1404 | 2300 | 1.004277 | GACAGCCTGGGGTGAACATAA | 59.996 | 52.381 | 23.20 | 0.00 | 45.42 | 1.90 |
1409 | 2305 | 1.534476 | TACGACAGCCTGGGGTGAA | 60.534 | 57.895 | 23.20 | 5.16 | 45.42 | 3.18 |
1563 | 2462 | 2.618241 | ACGAACACACATGCATCTTTGT | 59.382 | 40.909 | 0.00 | 0.00 | 0.00 | 2.83 |
1569 | 2468 | 2.766313 | ACACTACGAACACACATGCAT | 58.234 | 42.857 | 0.00 | 0.00 | 0.00 | 3.96 |
1706 | 2615 | 6.398935 | GCAACAACTAATTTGATGACGCTTTC | 60.399 | 38.462 | 4.30 | 0.00 | 39.74 | 2.62 |
1782 | 2695 | 7.769044 | TGGCTTCTTCTTACCATAACATTAGTC | 59.231 | 37.037 | 0.00 | 0.00 | 0.00 | 2.59 |
1833 | 2746 | 0.108520 | GGATCCGGCGACACTTTACA | 60.109 | 55.000 | 9.30 | 0.00 | 0.00 | 2.41 |
1846 | 2759 | 6.525629 | ACCAAGTCTATAAATTCTGGATCCG | 58.474 | 40.000 | 7.39 | 2.06 | 0.00 | 4.18 |
1868 | 2781 | 0.318120 | CATTCCAGTGCAACCCAACC | 59.682 | 55.000 | 0.00 | 0.00 | 37.80 | 3.77 |
1963 | 2907 | 1.752833 | GGTCTCTCCCGTGGTTTGT | 59.247 | 57.895 | 0.00 | 0.00 | 0.00 | 2.83 |
1985 | 2929 | 6.905076 | CGGAAATTATGGATTGTGTAAACTCG | 59.095 | 38.462 | 0.00 | 0.00 | 0.00 | 4.18 |
2006 | 2951 | 5.357314 | TGAAAATGTTCAAACTACACCGGAA | 59.643 | 36.000 | 9.46 | 0.00 | 40.87 | 4.30 |
2008 | 2953 | 5.176407 | TGAAAATGTTCAAACTACACCGG | 57.824 | 39.130 | 0.00 | 0.00 | 40.87 | 5.28 |
2070 | 3020 | 2.267426 | GTCACAACAACTTTTGGCACC | 58.733 | 47.619 | 0.00 | 0.00 | 34.12 | 5.01 |
2308 | 3266 | 3.900116 | CGCGAATGTAAATGGCTTTATCG | 59.100 | 43.478 | 0.00 | 0.00 | 33.28 | 2.92 |
2309 | 3267 | 4.844267 | ACGCGAATGTAAATGGCTTTATC | 58.156 | 39.130 | 15.93 | 0.00 | 0.00 | 1.75 |
2310 | 3268 | 4.893424 | ACGCGAATGTAAATGGCTTTAT | 57.107 | 36.364 | 15.93 | 0.00 | 0.00 | 1.40 |
2311 | 3269 | 4.437659 | GGAACGCGAATGTAAATGGCTTTA | 60.438 | 41.667 | 15.93 | 0.00 | 0.00 | 1.85 |
2312 | 3270 | 3.498082 | GAACGCGAATGTAAATGGCTTT | 58.502 | 40.909 | 15.93 | 0.00 | 0.00 | 3.51 |
2313 | 3271 | 2.159435 | GGAACGCGAATGTAAATGGCTT | 60.159 | 45.455 | 15.93 | 0.00 | 0.00 | 4.35 |
2314 | 3272 | 1.400494 | GGAACGCGAATGTAAATGGCT | 59.600 | 47.619 | 15.93 | 0.00 | 0.00 | 4.75 |
2315 | 3273 | 1.131504 | TGGAACGCGAATGTAAATGGC | 59.868 | 47.619 | 15.93 | 0.00 | 0.00 | 4.40 |
2316 | 3274 | 3.548014 | GGATGGAACGCGAATGTAAATGG | 60.548 | 47.826 | 15.93 | 0.00 | 0.00 | 3.16 |
2317 | 3275 | 3.064682 | TGGATGGAACGCGAATGTAAATG | 59.935 | 43.478 | 15.93 | 0.00 | 0.00 | 2.32 |
2318 | 3276 | 3.064820 | GTGGATGGAACGCGAATGTAAAT | 59.935 | 43.478 | 15.93 | 0.00 | 0.00 | 1.40 |
2319 | 3277 | 2.417239 | GTGGATGGAACGCGAATGTAAA | 59.583 | 45.455 | 15.93 | 0.00 | 0.00 | 2.01 |
2320 | 3278 | 2.004017 | GTGGATGGAACGCGAATGTAA | 58.996 | 47.619 | 15.93 | 0.00 | 0.00 | 2.41 |
2321 | 3279 | 1.066787 | TGTGGATGGAACGCGAATGTA | 60.067 | 47.619 | 15.93 | 0.00 | 0.00 | 2.29 |
2322 | 3280 | 0.321210 | TGTGGATGGAACGCGAATGT | 60.321 | 50.000 | 15.93 | 0.00 | 0.00 | 2.71 |
2323 | 3281 | 0.374758 | CTGTGGATGGAACGCGAATG | 59.625 | 55.000 | 15.93 | 0.00 | 0.00 | 2.67 |
2324 | 3282 | 1.369091 | GCTGTGGATGGAACGCGAAT | 61.369 | 55.000 | 15.93 | 0.00 | 0.00 | 3.34 |
2325 | 3283 | 2.032634 | GCTGTGGATGGAACGCGAA | 61.033 | 57.895 | 15.93 | 0.00 | 0.00 | 4.70 |
2326 | 3284 | 2.434185 | GCTGTGGATGGAACGCGA | 60.434 | 61.111 | 15.93 | 0.00 | 0.00 | 5.87 |
2327 | 3285 | 3.853330 | CGCTGTGGATGGAACGCG | 61.853 | 66.667 | 3.53 | 3.53 | 35.50 | 6.01 |
2328 | 3286 | 4.166011 | GCGCTGTGGATGGAACGC | 62.166 | 66.667 | 0.00 | 0.00 | 39.49 | 4.84 |
2329 | 3287 | 3.499737 | GGCGCTGTGGATGGAACG | 61.500 | 66.667 | 7.64 | 0.00 | 0.00 | 3.95 |
2330 | 3288 | 1.315257 | ATTGGCGCTGTGGATGGAAC | 61.315 | 55.000 | 7.64 | 0.00 | 0.00 | 3.62 |
2331 | 3289 | 1.001020 | ATTGGCGCTGTGGATGGAA | 60.001 | 52.632 | 7.64 | 0.00 | 0.00 | 3.53 |
2332 | 3290 | 1.451927 | GATTGGCGCTGTGGATGGA | 60.452 | 57.895 | 7.64 | 0.00 | 0.00 | 3.41 |
2333 | 3291 | 1.442526 | GAGATTGGCGCTGTGGATGG | 61.443 | 60.000 | 7.64 | 0.00 | 0.00 | 3.51 |
2334 | 3292 | 1.442526 | GGAGATTGGCGCTGTGGATG | 61.443 | 60.000 | 7.64 | 0.00 | 0.00 | 3.51 |
2335 | 3293 | 1.153086 | GGAGATTGGCGCTGTGGAT | 60.153 | 57.895 | 7.64 | 0.00 | 0.00 | 3.41 |
2336 | 3294 | 2.268920 | GGAGATTGGCGCTGTGGA | 59.731 | 61.111 | 7.64 | 0.00 | 0.00 | 4.02 |
2337 | 3295 | 2.046023 | TGGAGATTGGCGCTGTGG | 60.046 | 61.111 | 7.64 | 0.00 | 0.00 | 4.17 |
2338 | 3296 | 2.401766 | GGTGGAGATTGGCGCTGTG | 61.402 | 63.158 | 7.64 | 0.00 | 0.00 | 3.66 |
2339 | 3297 | 2.045926 | GGTGGAGATTGGCGCTGT | 60.046 | 61.111 | 7.64 | 0.00 | 0.00 | 4.40 |
2340 | 3298 | 3.197790 | CGGTGGAGATTGGCGCTG | 61.198 | 66.667 | 7.64 | 0.00 | 0.00 | 5.18 |
2344 | 3302 | 3.936772 | TTGGGCGGTGGAGATTGGC | 62.937 | 63.158 | 0.00 | 0.00 | 0.00 | 4.52 |
2345 | 3303 | 0.897863 | TTTTGGGCGGTGGAGATTGG | 60.898 | 55.000 | 0.00 | 0.00 | 0.00 | 3.16 |
2346 | 3304 | 0.243636 | GTTTTGGGCGGTGGAGATTG | 59.756 | 55.000 | 0.00 | 0.00 | 0.00 | 2.67 |
2347 | 3305 | 0.112412 | AGTTTTGGGCGGTGGAGATT | 59.888 | 50.000 | 0.00 | 0.00 | 0.00 | 2.40 |
2348 | 3306 | 0.609131 | CAGTTTTGGGCGGTGGAGAT | 60.609 | 55.000 | 0.00 | 0.00 | 0.00 | 2.75 |
2349 | 3307 | 1.228124 | CAGTTTTGGGCGGTGGAGA | 60.228 | 57.895 | 0.00 | 0.00 | 0.00 | 3.71 |
2350 | 3308 | 2.919494 | GCAGTTTTGGGCGGTGGAG | 61.919 | 63.158 | 0.00 | 0.00 | 0.00 | 3.86 |
2351 | 3309 | 2.909965 | GCAGTTTTGGGCGGTGGA | 60.910 | 61.111 | 0.00 | 0.00 | 0.00 | 4.02 |
2352 | 3310 | 2.912025 | AGCAGTTTTGGGCGGTGG | 60.912 | 61.111 | 0.00 | 0.00 | 34.54 | 4.61 |
2353 | 3311 | 1.526575 | ATGAGCAGTTTTGGGCGGTG | 61.527 | 55.000 | 0.00 | 0.00 | 34.54 | 4.94 |
2354 | 3312 | 1.228552 | ATGAGCAGTTTTGGGCGGT | 60.229 | 52.632 | 0.00 | 0.00 | 34.54 | 5.68 |
2355 | 3313 | 1.213537 | CATGAGCAGTTTTGGGCGG | 59.786 | 57.895 | 0.00 | 0.00 | 34.54 | 6.13 |
2356 | 3314 | 0.813184 | ATCATGAGCAGTTTTGGGCG | 59.187 | 50.000 | 0.09 | 0.00 | 34.54 | 6.13 |
2357 | 3315 | 1.202222 | CGATCATGAGCAGTTTTGGGC | 60.202 | 52.381 | 12.15 | 0.00 | 0.00 | 5.36 |
2358 | 3316 | 2.358957 | TCGATCATGAGCAGTTTTGGG | 58.641 | 47.619 | 12.15 | 0.00 | 0.00 | 4.12 |
2359 | 3317 | 4.154737 | TCTTTCGATCATGAGCAGTTTTGG | 59.845 | 41.667 | 12.15 | 0.00 | 0.00 | 3.28 |
2360 | 3318 | 5.287170 | TCTTTCGATCATGAGCAGTTTTG | 57.713 | 39.130 | 12.15 | 0.00 | 0.00 | 2.44 |
2361 | 3319 | 5.675575 | GCATCTTTCGATCATGAGCAGTTTT | 60.676 | 40.000 | 12.15 | 0.00 | 0.00 | 2.43 |
2362 | 3320 | 4.201891 | GCATCTTTCGATCATGAGCAGTTT | 60.202 | 41.667 | 12.15 | 0.00 | 0.00 | 2.66 |
2363 | 3321 | 3.311871 | GCATCTTTCGATCATGAGCAGTT | 59.688 | 43.478 | 12.15 | 0.00 | 0.00 | 3.16 |
2364 | 3322 | 2.871022 | GCATCTTTCGATCATGAGCAGT | 59.129 | 45.455 | 12.15 | 0.00 | 0.00 | 4.40 |
2365 | 3323 | 2.870411 | TGCATCTTTCGATCATGAGCAG | 59.130 | 45.455 | 12.15 | 4.20 | 0.00 | 4.24 |
2366 | 3324 | 2.908916 | TGCATCTTTCGATCATGAGCA | 58.091 | 42.857 | 12.15 | 4.08 | 0.00 | 4.26 |
2367 | 3325 | 3.250280 | ACATGCATCTTTCGATCATGAGC | 59.750 | 43.478 | 0.00 | 0.00 | 37.90 | 4.26 |
2368 | 3326 | 4.510340 | TCACATGCATCTTTCGATCATGAG | 59.490 | 41.667 | 0.09 | 10.64 | 37.90 | 2.90 |
2369 | 3327 | 4.444536 | TCACATGCATCTTTCGATCATGA | 58.555 | 39.130 | 0.00 | 0.00 | 37.90 | 3.07 |
2370 | 3328 | 4.510340 | TCTCACATGCATCTTTCGATCATG | 59.490 | 41.667 | 0.00 | 0.00 | 39.02 | 3.07 |
2371 | 3329 | 4.700700 | TCTCACATGCATCTTTCGATCAT | 58.299 | 39.130 | 0.00 | 0.00 | 0.00 | 2.45 |
2372 | 3330 | 4.127566 | TCTCACATGCATCTTTCGATCA | 57.872 | 40.909 | 0.00 | 0.00 | 0.00 | 2.92 |
2373 | 3331 | 5.475273 | TTTCTCACATGCATCTTTCGATC | 57.525 | 39.130 | 0.00 | 0.00 | 0.00 | 3.69 |
2374 | 3332 | 4.201891 | GCTTTCTCACATGCATCTTTCGAT | 60.202 | 41.667 | 0.00 | 0.00 | 0.00 | 3.59 |
2375 | 3333 | 3.125829 | GCTTTCTCACATGCATCTTTCGA | 59.874 | 43.478 | 0.00 | 0.00 | 0.00 | 3.71 |
2376 | 3334 | 3.126514 | AGCTTTCTCACATGCATCTTTCG | 59.873 | 43.478 | 0.00 | 0.00 | 0.00 | 3.46 |
2377 | 3335 | 4.155462 | TCAGCTTTCTCACATGCATCTTTC | 59.845 | 41.667 | 0.00 | 0.00 | 0.00 | 2.62 |
2378 | 3336 | 4.077108 | TCAGCTTTCTCACATGCATCTTT | 58.923 | 39.130 | 0.00 | 0.00 | 0.00 | 2.52 |
2379 | 3337 | 3.439476 | GTCAGCTTTCTCACATGCATCTT | 59.561 | 43.478 | 0.00 | 0.00 | 0.00 | 2.40 |
2380 | 3338 | 3.008330 | GTCAGCTTTCTCACATGCATCT | 58.992 | 45.455 | 0.00 | 0.00 | 0.00 | 2.90 |
2381 | 3339 | 2.745821 | TGTCAGCTTTCTCACATGCATC | 59.254 | 45.455 | 0.00 | 0.00 | 0.00 | 3.91 |
2382 | 3340 | 2.786777 | TGTCAGCTTTCTCACATGCAT | 58.213 | 42.857 | 0.00 | 0.00 | 0.00 | 3.96 |
2383 | 3341 | 2.259266 | TGTCAGCTTTCTCACATGCA | 57.741 | 45.000 | 0.00 | 0.00 | 0.00 | 3.96 |
2384 | 3342 | 3.499048 | CAATGTCAGCTTTCTCACATGC | 58.501 | 45.455 | 0.00 | 0.00 | 29.78 | 4.06 |
2385 | 3343 | 3.672511 | GCCAATGTCAGCTTTCTCACATG | 60.673 | 47.826 | 0.00 | 0.00 | 29.78 | 3.21 |
2386 | 3344 | 2.490903 | GCCAATGTCAGCTTTCTCACAT | 59.509 | 45.455 | 0.00 | 0.00 | 0.00 | 3.21 |
2387 | 3345 | 1.881973 | GCCAATGTCAGCTTTCTCACA | 59.118 | 47.619 | 0.00 | 0.00 | 0.00 | 3.58 |
2388 | 3346 | 1.881973 | TGCCAATGTCAGCTTTCTCAC | 59.118 | 47.619 | 0.00 | 0.00 | 0.00 | 3.51 |
2389 | 3347 | 2.275134 | TGCCAATGTCAGCTTTCTCA | 57.725 | 45.000 | 0.00 | 0.00 | 0.00 | 3.27 |
2390 | 3348 | 3.015327 | AGATGCCAATGTCAGCTTTCTC | 58.985 | 45.455 | 0.00 | 0.00 | 0.00 | 2.87 |
2391 | 3349 | 2.753452 | CAGATGCCAATGTCAGCTTTCT | 59.247 | 45.455 | 0.00 | 0.00 | 0.00 | 2.52 |
2392 | 3350 | 2.734492 | GCAGATGCCAATGTCAGCTTTC | 60.734 | 50.000 | 0.00 | 0.00 | 34.31 | 2.62 |
2393 | 3351 | 1.203994 | GCAGATGCCAATGTCAGCTTT | 59.796 | 47.619 | 0.00 | 0.00 | 34.31 | 3.51 |
2394 | 3352 | 0.815734 | GCAGATGCCAATGTCAGCTT | 59.184 | 50.000 | 0.00 | 0.00 | 34.31 | 3.74 |
2395 | 3353 | 0.323087 | TGCAGATGCCAATGTCAGCT | 60.323 | 50.000 | 1.72 | 0.00 | 41.18 | 4.24 |
2396 | 3354 | 0.528924 | TTGCAGATGCCAATGTCAGC | 59.471 | 50.000 | 1.72 | 0.00 | 41.18 | 4.26 |
2397 | 3355 | 1.135199 | GGTTGCAGATGCCAATGTCAG | 60.135 | 52.381 | 1.72 | 0.00 | 41.18 | 3.51 |
2398 | 3356 | 0.889994 | GGTTGCAGATGCCAATGTCA | 59.110 | 50.000 | 1.72 | 0.00 | 41.18 | 3.58 |
2399 | 3357 | 0.179156 | CGGTTGCAGATGCCAATGTC | 60.179 | 55.000 | 1.72 | 0.00 | 41.18 | 3.06 |
2400 | 3358 | 0.895100 | ACGGTTGCAGATGCCAATGT | 60.895 | 50.000 | 1.72 | 0.00 | 41.18 | 2.71 |
2401 | 3359 | 0.457166 | CACGGTTGCAGATGCCAATG | 60.457 | 55.000 | 1.72 | 0.00 | 41.18 | 2.82 |
2402 | 3360 | 0.895100 | ACACGGTTGCAGATGCCAAT | 60.895 | 50.000 | 1.72 | 0.00 | 41.18 | 3.16 |
2403 | 3361 | 1.514678 | GACACGGTTGCAGATGCCAA | 61.515 | 55.000 | 1.72 | 0.00 | 41.18 | 4.52 |
2404 | 3362 | 1.965930 | GACACGGTTGCAGATGCCA | 60.966 | 57.895 | 1.72 | 0.00 | 41.18 | 4.92 |
2405 | 3363 | 2.690778 | GGACACGGTTGCAGATGCC | 61.691 | 63.158 | 1.72 | 0.00 | 41.18 | 4.40 |
2406 | 3364 | 1.237285 | AAGGACACGGTTGCAGATGC | 61.237 | 55.000 | 0.00 | 0.00 | 42.50 | 3.91 |
2407 | 3365 | 0.798776 | GAAGGACACGGTTGCAGATG | 59.201 | 55.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2408 | 3366 | 0.687354 | AGAAGGACACGGTTGCAGAT | 59.313 | 50.000 | 0.00 | 0.00 | 0.00 | 2.90 |
2409 | 3367 | 0.033504 | GAGAAGGACACGGTTGCAGA | 59.966 | 55.000 | 0.00 | 0.00 | 0.00 | 4.26 |
2410 | 3368 | 0.034059 | AGAGAAGGACACGGTTGCAG | 59.966 | 55.000 | 0.00 | 0.00 | 0.00 | 4.41 |
2411 | 3369 | 0.468226 | AAGAGAAGGACACGGTTGCA | 59.532 | 50.000 | 0.00 | 0.00 | 0.00 | 4.08 |
2412 | 3370 | 1.531578 | GAAAGAGAAGGACACGGTTGC | 59.468 | 52.381 | 0.00 | 0.00 | 0.00 | 4.17 |
2413 | 3371 | 1.792949 | CGAAAGAGAAGGACACGGTTG | 59.207 | 52.381 | 0.00 | 0.00 | 0.00 | 3.77 |
2414 | 3372 | 1.872653 | GCGAAAGAGAAGGACACGGTT | 60.873 | 52.381 | 0.00 | 0.00 | 0.00 | 4.44 |
2415 | 3373 | 0.319641 | GCGAAAGAGAAGGACACGGT | 60.320 | 55.000 | 0.00 | 0.00 | 0.00 | 4.83 |
2416 | 3374 | 0.319555 | TGCGAAAGAGAAGGACACGG | 60.320 | 55.000 | 0.00 | 0.00 | 0.00 | 4.94 |
2417 | 3375 | 1.391485 | CATGCGAAAGAGAAGGACACG | 59.609 | 52.381 | 0.00 | 0.00 | 0.00 | 4.49 |
2418 | 3376 | 1.129437 | GCATGCGAAAGAGAAGGACAC | 59.871 | 52.381 | 0.00 | 0.00 | 0.00 | 3.67 |
2419 | 3377 | 1.270785 | TGCATGCGAAAGAGAAGGACA | 60.271 | 47.619 | 14.09 | 0.00 | 0.00 | 4.02 |
2420 | 3378 | 1.442769 | TGCATGCGAAAGAGAAGGAC | 58.557 | 50.000 | 14.09 | 0.00 | 0.00 | 3.85 |
2421 | 3379 | 2.011947 | CATGCATGCGAAAGAGAAGGA | 58.988 | 47.619 | 14.93 | 0.00 | 0.00 | 3.36 |
2422 | 3380 | 1.533338 | GCATGCATGCGAAAGAGAAGG | 60.533 | 52.381 | 33.99 | 1.48 | 44.67 | 3.46 |
2423 | 3381 | 1.823828 | GCATGCATGCGAAAGAGAAG | 58.176 | 50.000 | 33.99 | 1.70 | 44.67 | 2.85 |
2434 | 3392 | 1.141657 | ACCTACTACCTGGCATGCATG | 59.858 | 52.381 | 22.70 | 22.70 | 0.00 | 4.06 |
2435 | 3393 | 1.141657 | CACCTACTACCTGGCATGCAT | 59.858 | 52.381 | 21.36 | 4.06 | 0.00 | 3.96 |
2436 | 3394 | 0.541392 | CACCTACTACCTGGCATGCA | 59.459 | 55.000 | 21.36 | 4.79 | 0.00 | 3.96 |
2437 | 3395 | 0.815615 | GCACCTACTACCTGGCATGC | 60.816 | 60.000 | 9.90 | 9.90 | 0.00 | 4.06 |
2438 | 3396 | 0.530650 | CGCACCTACTACCTGGCATG | 60.531 | 60.000 | 0.00 | 0.00 | 0.00 | 4.06 |
2439 | 3397 | 1.686325 | CCGCACCTACTACCTGGCAT | 61.686 | 60.000 | 0.00 | 0.00 | 0.00 | 4.40 |
2440 | 3398 | 2.355986 | CCGCACCTACTACCTGGCA | 61.356 | 63.158 | 0.00 | 0.00 | 0.00 | 4.92 |
2441 | 3399 | 1.400530 | ATCCGCACCTACTACCTGGC | 61.401 | 60.000 | 0.00 | 0.00 | 0.00 | 4.85 |
2442 | 3400 | 1.887198 | CTATCCGCACCTACTACCTGG | 59.113 | 57.143 | 0.00 | 0.00 | 0.00 | 4.45 |
2443 | 3401 | 1.887198 | CCTATCCGCACCTACTACCTG | 59.113 | 57.143 | 0.00 | 0.00 | 0.00 | 4.00 |
2444 | 3402 | 1.498145 | ACCTATCCGCACCTACTACCT | 59.502 | 52.381 | 0.00 | 0.00 | 0.00 | 3.08 |
2445 | 3403 | 1.612463 | CACCTATCCGCACCTACTACC | 59.388 | 57.143 | 0.00 | 0.00 | 0.00 | 3.18 |
2446 | 3404 | 1.000496 | GCACCTATCCGCACCTACTAC | 60.000 | 57.143 | 0.00 | 0.00 | 0.00 | 2.73 |
2447 | 3405 | 1.133575 | AGCACCTATCCGCACCTACTA | 60.134 | 52.381 | 0.00 | 0.00 | 0.00 | 1.82 |
2448 | 3406 | 0.397254 | AGCACCTATCCGCACCTACT | 60.397 | 55.000 | 0.00 | 0.00 | 0.00 | 2.57 |
2449 | 3407 | 1.000496 | GTAGCACCTATCCGCACCTAC | 60.000 | 57.143 | 0.00 | 0.00 | 0.00 | 3.18 |
2450 | 3408 | 1.133575 | AGTAGCACCTATCCGCACCTA | 60.134 | 52.381 | 0.00 | 0.00 | 0.00 | 3.08 |
2451 | 3409 | 0.397254 | AGTAGCACCTATCCGCACCT | 60.397 | 55.000 | 0.00 | 0.00 | 0.00 | 4.00 |
2452 | 3410 | 0.032267 | GAGTAGCACCTATCCGCACC | 59.968 | 60.000 | 0.00 | 0.00 | 0.00 | 5.01 |
2453 | 3411 | 0.032267 | GGAGTAGCACCTATCCGCAC | 59.968 | 60.000 | 0.00 | 0.00 | 0.00 | 5.34 |
2454 | 3412 | 1.113517 | GGGAGTAGCACCTATCCGCA | 61.114 | 60.000 | 0.00 | 0.00 | 32.30 | 5.69 |
2455 | 3413 | 0.828343 | AGGGAGTAGCACCTATCCGC | 60.828 | 60.000 | 0.00 | 0.00 | 34.71 | 5.54 |
2456 | 3414 | 1.614413 | GAAGGGAGTAGCACCTATCCG | 59.386 | 57.143 | 0.00 | 0.00 | 35.64 | 4.18 |
2457 | 3415 | 1.614413 | CGAAGGGAGTAGCACCTATCC | 59.386 | 57.143 | 0.00 | 0.00 | 35.64 | 2.59 |
2458 | 3416 | 2.308690 | ACGAAGGGAGTAGCACCTATC | 58.691 | 52.381 | 0.00 | 0.00 | 35.64 | 2.08 |
2459 | 3417 | 2.456073 | ACGAAGGGAGTAGCACCTAT | 57.544 | 50.000 | 0.00 | 0.00 | 35.64 | 2.57 |
2460 | 3418 | 2.097825 | GAACGAAGGGAGTAGCACCTA | 58.902 | 52.381 | 0.00 | 0.00 | 35.64 | 3.08 |
2461 | 3419 | 0.896226 | GAACGAAGGGAGTAGCACCT | 59.104 | 55.000 | 0.00 | 0.00 | 39.21 | 4.00 |
2462 | 3420 | 0.896226 | AGAACGAAGGGAGTAGCACC | 59.104 | 55.000 | 0.00 | 0.00 | 0.00 | 5.01 |
2463 | 3421 | 3.863142 | TTAGAACGAAGGGAGTAGCAC | 57.137 | 47.619 | 0.00 | 0.00 | 0.00 | 4.40 |
2464 | 3422 | 4.877378 | TTTTAGAACGAAGGGAGTAGCA | 57.123 | 40.909 | 0.00 | 0.00 | 0.00 | 3.49 |
2465 | 3423 | 6.803642 | TCTATTTTAGAACGAAGGGAGTAGC | 58.196 | 40.000 | 0.00 | 0.00 | 0.00 | 3.58 |
2466 | 3424 | 8.630917 | TCATCTATTTTAGAACGAAGGGAGTAG | 58.369 | 37.037 | 0.00 | 0.00 | 38.50 | 2.57 |
2467 | 3425 | 8.411683 | GTCATCTATTTTAGAACGAAGGGAGTA | 58.588 | 37.037 | 0.00 | 0.00 | 38.50 | 2.59 |
2468 | 3426 | 7.124448 | AGTCATCTATTTTAGAACGAAGGGAGT | 59.876 | 37.037 | 0.00 | 0.00 | 38.50 | 3.85 |
2469 | 3427 | 7.493367 | AGTCATCTATTTTAGAACGAAGGGAG | 58.507 | 38.462 | 0.00 | 0.00 | 38.50 | 4.30 |
2470 | 3428 | 7.123697 | TGAGTCATCTATTTTAGAACGAAGGGA | 59.876 | 37.037 | 0.00 | 0.00 | 38.50 | 4.20 |
2471 | 3429 | 7.265673 | TGAGTCATCTATTTTAGAACGAAGGG | 58.734 | 38.462 | 0.00 | 0.00 | 38.50 | 3.95 |
2472 | 3430 | 8.596380 | GTTGAGTCATCTATTTTAGAACGAAGG | 58.404 | 37.037 | 0.00 | 0.00 | 38.50 | 3.46 |
2473 | 3431 | 9.360093 | AGTTGAGTCATCTATTTTAGAACGAAG | 57.640 | 33.333 | 1.70 | 0.00 | 38.50 | 3.79 |
2474 | 3432 | 9.706691 | AAGTTGAGTCATCTATTTTAGAACGAA | 57.293 | 29.630 | 4.14 | 0.00 | 38.50 | 3.85 |
2475 | 3433 | 9.706691 | AAAGTTGAGTCATCTATTTTAGAACGA | 57.293 | 29.630 | 4.14 | 0.00 | 38.50 | 3.85 |
2476 | 3434 | 9.746711 | CAAAGTTGAGTCATCTATTTTAGAACG | 57.253 | 33.333 | 4.14 | 0.00 | 38.50 | 3.95 |
2487 | 3445 | 9.046296 | CAAAGTTAGTACAAAGTTGAGTCATCT | 57.954 | 33.333 | 0.00 | 0.00 | 0.00 | 2.90 |
2488 | 3446 | 8.827677 | ACAAAGTTAGTACAAAGTTGAGTCATC | 58.172 | 33.333 | 0.00 | 0.00 | 0.00 | 2.92 |
2489 | 3447 | 8.732746 | ACAAAGTTAGTACAAAGTTGAGTCAT | 57.267 | 30.769 | 0.00 | 0.00 | 0.00 | 3.06 |
2490 | 3448 | 9.090692 | GTACAAAGTTAGTACAAAGTTGAGTCA | 57.909 | 33.333 | 0.00 | 0.00 | 41.08 | 3.41 |
2491 | 3449 | 9.310716 | AGTACAAAGTTAGTACAAAGTTGAGTC | 57.689 | 33.333 | 6.30 | 0.00 | 43.24 | 3.36 |
2514 | 3472 | 8.853126 | TGACTCAGCTTTGTACTAGTTTTAGTA | 58.147 | 33.333 | 0.00 | 0.00 | 40.55 | 1.82 |
2515 | 3473 | 7.723324 | TGACTCAGCTTTGTACTAGTTTTAGT | 58.277 | 34.615 | 0.00 | 0.00 | 42.66 | 2.24 |
2516 | 3474 | 8.764524 | ATGACTCAGCTTTGTACTAGTTTTAG | 57.235 | 34.615 | 0.00 | 0.00 | 0.00 | 1.85 |
2517 | 3475 | 8.585881 | AGATGACTCAGCTTTGTACTAGTTTTA | 58.414 | 33.333 | 0.00 | 0.00 | 0.00 | 1.52 |
2518 | 3476 | 7.445945 | AGATGACTCAGCTTTGTACTAGTTTT | 58.554 | 34.615 | 0.00 | 0.00 | 0.00 | 2.43 |
2519 | 3477 | 6.998802 | AGATGACTCAGCTTTGTACTAGTTT | 58.001 | 36.000 | 0.00 | 0.00 | 0.00 | 2.66 |
2520 | 3478 | 6.597832 | AGATGACTCAGCTTTGTACTAGTT | 57.402 | 37.500 | 0.00 | 0.00 | 0.00 | 2.24 |
2521 | 3479 | 7.889873 | ATAGATGACTCAGCTTTGTACTAGT | 57.110 | 36.000 | 1.33 | 0.00 | 30.76 | 2.57 |
2522 | 3480 | 9.593134 | AAAATAGATGACTCAGCTTTGTACTAG | 57.407 | 33.333 | 1.33 | 0.00 | 30.76 | 2.57 |
2523 | 3481 | 9.371136 | CAAAATAGATGACTCAGCTTTGTACTA | 57.629 | 33.333 | 1.33 | 0.00 | 30.76 | 1.82 |
2524 | 3482 | 7.335422 | CCAAAATAGATGACTCAGCTTTGTACT | 59.665 | 37.037 | 1.33 | 0.00 | 30.76 | 2.73 |
2525 | 3483 | 7.334421 | TCCAAAATAGATGACTCAGCTTTGTAC | 59.666 | 37.037 | 1.33 | 0.00 | 30.76 | 2.90 |
2526 | 3484 | 7.394016 | TCCAAAATAGATGACTCAGCTTTGTA | 58.606 | 34.615 | 1.33 | 0.00 | 30.76 | 2.41 |
2527 | 3485 | 6.240894 | TCCAAAATAGATGACTCAGCTTTGT | 58.759 | 36.000 | 1.33 | 0.00 | 30.76 | 2.83 |
2528 | 3486 | 6.748333 | TCCAAAATAGATGACTCAGCTTTG | 57.252 | 37.500 | 1.33 | 1.55 | 30.76 | 2.77 |
2529 | 3487 | 6.128172 | CGTTCCAAAATAGATGACTCAGCTTT | 60.128 | 38.462 | 1.33 | 0.00 | 30.76 | 3.51 |
2530 | 3488 | 5.352569 | CGTTCCAAAATAGATGACTCAGCTT | 59.647 | 40.000 | 1.33 | 0.00 | 30.76 | 3.74 |
2531 | 3489 | 4.872691 | CGTTCCAAAATAGATGACTCAGCT | 59.127 | 41.667 | 1.74 | 1.74 | 33.54 | 4.24 |
2532 | 3490 | 4.034510 | CCGTTCCAAAATAGATGACTCAGC | 59.965 | 45.833 | 0.00 | 0.00 | 0.00 | 4.26 |
2533 | 3491 | 5.419542 | TCCGTTCCAAAATAGATGACTCAG | 58.580 | 41.667 | 0.00 | 0.00 | 0.00 | 3.35 |
2534 | 3492 | 5.414789 | TCCGTTCCAAAATAGATGACTCA | 57.585 | 39.130 | 0.00 | 0.00 | 0.00 | 3.41 |
2535 | 3493 | 4.811557 | CCTCCGTTCCAAAATAGATGACTC | 59.188 | 45.833 | 0.00 | 0.00 | 0.00 | 3.36 |
2536 | 3494 | 4.384208 | CCCTCCGTTCCAAAATAGATGACT | 60.384 | 45.833 | 0.00 | 0.00 | 0.00 | 3.41 |
2537 | 3495 | 3.877508 | CCCTCCGTTCCAAAATAGATGAC | 59.122 | 47.826 | 0.00 | 0.00 | 0.00 | 3.06 |
2538 | 3496 | 3.778075 | TCCCTCCGTTCCAAAATAGATGA | 59.222 | 43.478 | 0.00 | 0.00 | 0.00 | 2.92 |
2539 | 3497 | 4.130118 | CTCCCTCCGTTCCAAAATAGATG | 58.870 | 47.826 | 0.00 | 0.00 | 0.00 | 2.90 |
2540 | 3498 | 3.780850 | ACTCCCTCCGTTCCAAAATAGAT | 59.219 | 43.478 | 0.00 | 0.00 | 0.00 | 1.98 |
2541 | 3499 | 3.178865 | ACTCCCTCCGTTCCAAAATAGA | 58.821 | 45.455 | 0.00 | 0.00 | 0.00 | 1.98 |
2542 | 3500 | 3.629142 | ACTCCCTCCGTTCCAAAATAG | 57.371 | 47.619 | 0.00 | 0.00 | 0.00 | 1.73 |
2543 | 3501 | 4.355549 | TCTACTCCCTCCGTTCCAAAATA | 58.644 | 43.478 | 0.00 | 0.00 | 0.00 | 1.40 |
2544 | 3502 | 3.178865 | TCTACTCCCTCCGTTCCAAAAT | 58.821 | 45.455 | 0.00 | 0.00 | 0.00 | 1.82 |
2545 | 3503 | 2.612000 | TCTACTCCCTCCGTTCCAAAA | 58.388 | 47.619 | 0.00 | 0.00 | 0.00 | 2.44 |
2546 | 3504 | 2.314071 | TCTACTCCCTCCGTTCCAAA | 57.686 | 50.000 | 0.00 | 0.00 | 0.00 | 3.28 |
2547 | 3505 | 2.544844 | ATCTACTCCCTCCGTTCCAA | 57.455 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2548 | 3506 | 2.024273 | AGAATCTACTCCCTCCGTTCCA | 60.024 | 50.000 | 0.00 | 0.00 | 0.00 | 3.53 |
2549 | 3507 | 2.668625 | AGAATCTACTCCCTCCGTTCC | 58.331 | 52.381 | 0.00 | 0.00 | 0.00 | 3.62 |
2550 | 3508 | 3.738590 | GCAAGAATCTACTCCCTCCGTTC | 60.739 | 52.174 | 0.00 | 0.00 | 0.00 | 3.95 |
2551 | 3509 | 2.168728 | GCAAGAATCTACTCCCTCCGTT | 59.831 | 50.000 | 0.00 | 0.00 | 0.00 | 4.44 |
2552 | 3510 | 1.757699 | GCAAGAATCTACTCCCTCCGT | 59.242 | 52.381 | 0.00 | 0.00 | 0.00 | 4.69 |
2553 | 3511 | 1.757118 | TGCAAGAATCTACTCCCTCCG | 59.243 | 52.381 | 0.00 | 0.00 | 0.00 | 4.63 |
2554 | 3512 | 3.135530 | ACATGCAAGAATCTACTCCCTCC | 59.864 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
2555 | 3513 | 4.376146 | GACATGCAAGAATCTACTCCCTC | 58.624 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
2556 | 3514 | 3.135530 | GGACATGCAAGAATCTACTCCCT | 59.864 | 47.826 | 0.00 | 0.00 | 0.00 | 4.20 |
2557 | 3515 | 3.118261 | TGGACATGCAAGAATCTACTCCC | 60.118 | 47.826 | 0.00 | 0.00 | 0.00 | 4.30 |
2558 | 3516 | 4.125703 | CTGGACATGCAAGAATCTACTCC | 58.874 | 47.826 | 0.00 | 0.00 | 0.00 | 3.85 |
2559 | 3517 | 3.559242 | GCTGGACATGCAAGAATCTACTC | 59.441 | 47.826 | 0.00 | 0.00 | 0.00 | 2.59 |
2560 | 3518 | 3.539604 | GCTGGACATGCAAGAATCTACT | 58.460 | 45.455 | 0.00 | 0.00 | 0.00 | 2.57 |
2561 | 3519 | 3.959573 | GCTGGACATGCAAGAATCTAC | 57.040 | 47.619 | 0.00 | 0.00 | 0.00 | 2.59 |
Based at the University of Bristol with support from BBSRC.
AutoCloner maintained by Alex Coulton.