Multiple sequence alignment - TraesCS5B01G293900

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G293900 chr5B 100.000 6532 0 0 1 6532 478475296 478481827 0.000000e+00 12063
1 TraesCS5B01G293900 chr5A 94.308 5235 224 31 1 5178 503517066 503522283 0.000000e+00 7949
2 TraesCS5B01G293900 chr5A 86.737 950 64 23 5223 6146 503522280 503523193 0.000000e+00 1000
3 TraesCS5B01G293900 chr5D 93.387 5247 228 41 1 5178 398524043 398529239 0.000000e+00 7657
4 TraesCS5B01G293900 chr5D 87.252 706 49 19 5582 6267 398529581 398530265 0.000000e+00 767
5 TraesCS5B01G293900 chr5D 93.511 262 16 1 5287 5547 398529321 398529582 7.940000e-104 388
6 TraesCS5B01G293900 chr4D 86.636 1100 130 11 4132 5226 1652604 1651517 0.000000e+00 1201
7 TraesCS5B01G293900 chr4D 78.352 1857 287 63 3469 5240 499893197 499891371 0.000000e+00 1096
8 TraesCS5B01G293900 chr4D 87.310 788 88 4 4135 4920 499902985 499902208 0.000000e+00 891
9 TraesCS5B01G293900 chr4D 86.757 808 96 6 4395 5191 1641951 1641144 0.000000e+00 889
10 TraesCS5B01G293900 chr4D 80.725 524 78 18 2398 2910 499904615 499904104 2.860000e-103 387
11 TraesCS5B01G293900 chr4D 82.353 357 47 11 2383 2732 1654413 1654066 4.950000e-76 296
12 TraesCS5B01G293900 chr4D 86.853 251 28 5 5307 5552 499901505 499901255 6.450000e-70 276
13 TraesCS5B01G293900 chr4D 86.328 256 29 6 5307 5557 1651060 1650806 2.320000e-69 274
14 TraesCS5B01G293900 chr4D 82.963 135 23 0 1762 1896 1655336 1655202 8.890000e-24 122
15 TraesCS5B01G293900 chr4D 88.172 93 11 0 1802 1894 1645712 1645620 1.930000e-20 111
16 TraesCS5B01G293900 chr4B 86.600 1097 129 9 4136 5226 2220166 2219082 0.000000e+00 1195
17 TraesCS5B01G293900 chr4B 84.727 1100 152 9 4132 5226 643023248 643024336 0.000000e+00 1086
18 TraesCS5B01G293900 chr4B 86.270 823 99 8 4383 5192 2209752 2208931 0.000000e+00 881
19 TraesCS5B01G293900 chr4B 86.270 823 99 8 4383 5192 2239742 2238921 0.000000e+00 881
20 TraesCS5B01G293900 chr4B 80.334 539 81 19 2383 2910 643021609 643022133 1.030000e-102 385
21 TraesCS5B01G293900 chr4B 75.205 855 138 35 3540 4345 2210666 2209837 8.110000e-89 339
22 TraesCS5B01G293900 chr4B 75.205 855 138 35 3540 4345 2240656 2239827 8.110000e-89 339
23 TraesCS5B01G293900 chr4B 78.022 546 89 18 2383 2910 2221786 2221254 1.370000e-81 315
24 TraesCS5B01G293900 chr4B 87.251 251 27 5 5307 5552 2218591 2218341 1.390000e-71 281
25 TraesCS5B01G293900 chr4B 85.772 246 32 3 5307 5549 643024894 643025139 2.340000e-64 257
26 TraesCS5B01G293900 chr4B 75.504 347 64 17 1767 2093 2227180 2226835 4.080000e-32 150
27 TraesCS5B01G293900 chr4B 75.504 347 64 17 1767 2093 2244295 2243950 4.080000e-32 150
28 TraesCS5B01G293900 chr4A 81.670 1413 197 36 3842 5197 603340728 603342135 0.000000e+00 1118
29 TraesCS5B01G293900 chr4A 85.671 328 37 6 4237 4563 603284782 603285100 2.920000e-88 337
30 TraesCS5B01G293900 chr4A 86.047 258 30 6 5297 5549 603286167 603286423 8.350000e-69 272
31 TraesCS5B01G293900 chr4A 80.729 192 28 7 6294 6478 666113616 666113805 2.460000e-29 141
32 TraesCS5B01G293900 chr4A 81.022 137 23 3 1762 1897 603333883 603334017 8.960000e-19 106
33 TraesCS5B01G293900 chr1B 86.875 160 14 5 6315 6469 200944758 200944915 8.710000e-39 172
34 TraesCS5B01G293900 chr2A 83.626 171 20 7 6308 6472 104714453 104714621 3.150000e-33 154
35 TraesCS5B01G293900 chr2A 84.672 137 21 0 1761 1897 34516534 34516398 3.180000e-28 137
36 TraesCS5B01G293900 chr2A 81.548 168 23 8 6314 6477 197319767 197319930 1.480000e-26 132
37 TraesCS5B01G293900 chr7D 82.941 170 26 3 6308 6476 386401322 386401489 4.080000e-32 150
38 TraesCS5B01G293900 chr7D 82.963 135 18 5 6348 6479 521688150 521688018 4.140000e-22 117
39 TraesCS5B01G293900 chr6B 84.416 154 22 2 6308 6461 140408863 140409014 4.080000e-32 150
40 TraesCS5B01G293900 chr6B 84.564 149 22 1 6313 6461 140446624 140446771 5.280000e-31 147
41 TraesCS5B01G293900 chr2D 85.401 137 20 0 1761 1897 32292076 32291940 6.830000e-30 143
42 TraesCS5B01G293900 chr3B 85.600 125 12 5 6294 6413 72720861 72720984 6.880000e-25 126


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G293900 chr5B 478475296 478481827 6531 False 12063.000000 12063 100.000000 1 6532 1 chr5B.!!$F1 6531
1 TraesCS5B01G293900 chr5A 503517066 503523193 6127 False 4474.500000 7949 90.522500 1 6146 2 chr5A.!!$F1 6145
2 TraesCS5B01G293900 chr5D 398524043 398530265 6222 False 2937.333333 7657 91.383333 1 6267 3 chr5D.!!$F1 6266
3 TraesCS5B01G293900 chr4D 499891371 499893197 1826 True 1096.000000 1096 78.352000 3469 5240 1 chr4D.!!$R1 1771
4 TraesCS5B01G293900 chr4D 499901255 499904615 3360 True 518.000000 891 84.962667 2398 5552 3 chr4D.!!$R4 3154
5 TraesCS5B01G293900 chr4D 1641144 1645712 4568 True 500.000000 889 87.464500 1802 5191 2 chr4D.!!$R2 3389
6 TraesCS5B01G293900 chr4D 1650806 1655336 4530 True 473.250000 1201 84.570000 1762 5557 4 chr4D.!!$R3 3795
7 TraesCS5B01G293900 chr4B 2208931 2210666 1735 True 610.000000 881 80.737500 3540 5192 2 chr4B.!!$R2 1652
8 TraesCS5B01G293900 chr4B 2218341 2221786 3445 True 597.000000 1195 83.957667 2383 5552 3 chr4B.!!$R3 3169
9 TraesCS5B01G293900 chr4B 643021609 643025139 3530 False 576.000000 1086 83.611000 2383 5549 3 chr4B.!!$F1 3166
10 TraesCS5B01G293900 chr4B 2238921 2244295 5374 True 456.666667 881 78.993000 1767 5192 3 chr4B.!!$R4 3425
11 TraesCS5B01G293900 chr4A 603340728 603342135 1407 False 1118.000000 1118 81.670000 3842 5197 1 chr4A.!!$F2 1355
12 TraesCS5B01G293900 chr4A 603284782 603286423 1641 False 304.500000 337 85.859000 4237 5549 2 chr4A.!!$F4 1312

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
839 852 0.257616 TAAGGCCAAGGGTATGCACC 59.742 55.0 5.01 0.0 44.96 5.01 F
1387 1401 0.775542 AGGTAAAAGGGACCGGCTTT 59.224 50.0 0.00 0.0 42.21 3.51 F
2793 4496 0.107643 GGGCATCCAGGTCTCTTAGC 59.892 60.0 0.00 0.0 0.00 3.09 F
3222 4957 0.601311 CTCTAAGCATAGCCGCACCC 60.601 60.0 0.00 0.0 0.00 4.61 F
3283 5214 0.692419 CCCTATGGGTGCAGAGGTCT 60.692 60.0 0.00 0.0 38.25 3.85 F
5174 8317 0.874390 CCAATGACACAGGTCCGTTG 59.126 55.0 0.00 0.0 43.65 4.10 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
2793 4496 0.322546 GGGTTGTTGGCCTGTAGAGG 60.323 60.000 3.32 0.31 43.19 3.69 R
3115 4840 0.813184 GCACTGGTGAACCATCCATG 59.187 55.000 1.88 1.33 46.46 3.66 R
4148 7209 2.105821 TGTTAGGGCAACAGCACTAGTT 59.894 45.455 0.00 0.00 44.49 2.24 R
5103 8246 1.278985 TCGTCTGGGCAGTTCATCATT 59.721 47.619 0.00 0.00 0.00 2.57 R
5197 8341 3.011818 GTGACTGGCATCACATGATTCA 58.988 45.455 18.78 0.00 46.89 2.57 R
6395 10170 0.240945 GTGGGCTTTTCGTGTGATGG 59.759 55.000 0.00 0.00 0.00 3.51 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 6.183360 ACGCAACTAAACAAACAAGAAGATGA 60.183 34.615 0.00 0.00 0.00 2.92
54 55 3.053455 CGGCGCCAAATTTAAAACAGAA 58.947 40.909 28.98 0.00 0.00 3.02
203 208 8.498054 AGAACACATTATGTAATCAGTTCAGG 57.502 34.615 20.06 0.58 42.31 3.86
205 210 8.498054 AACACATTATGTAATCAGTTCAGGAG 57.502 34.615 0.00 0.00 42.31 3.69
213 218 4.778534 AATCAGTTCAGGAGCATTGTTG 57.221 40.909 0.00 0.00 0.00 3.33
356 365 4.090761 TCACTGGCTGGGATCATTATTC 57.909 45.455 0.00 0.00 0.00 1.75
371 380 6.949352 TCATTATTCCAAAGATGAGAAGCC 57.051 37.500 0.00 0.00 0.00 4.35
407 416 2.469516 CCGGGCACAAAGATACCGC 61.470 63.158 0.00 0.00 42.99 5.68
492 501 2.353605 GCTCTCTGTTGACTGAAGGAGG 60.354 54.545 8.37 0.00 0.00 4.30
495 504 3.827302 TCTCTGTTGACTGAAGGAGGTAC 59.173 47.826 0.00 0.00 0.00 3.34
524 533 1.452108 GAAAGAGATGGCCCGTGGG 60.452 63.158 0.00 0.00 38.57 4.61
587 597 3.056328 GCCTCACGTTGAAGGGGC 61.056 66.667 0.00 0.00 0.00 5.80
644 655 1.927174 CGATGGACGTGGACTGAATTC 59.073 52.381 0.00 0.00 37.22 2.17
645 656 2.280628 GATGGACGTGGACTGAATTCC 58.719 52.381 2.27 0.00 36.03 3.01
676 687 2.896443 GACCTCGAAGCTCTGGGG 59.104 66.667 2.56 2.56 0.00 4.96
698 709 4.381505 GGCCAACTTCTTGTTTGTTTCTGA 60.382 41.667 0.00 0.00 36.63 3.27
702 713 6.197096 CCAACTTCTTGTTTGTTTCTGAATCG 59.803 38.462 0.00 0.00 36.63 3.34
749 760 2.261345 CTGAGAGAGCAAGAGAAAGCG 58.739 52.381 0.00 0.00 35.48 4.68
780 791 0.684535 GCTCCTCCTTGCTCCTATCC 59.315 60.000 0.00 0.00 0.00 2.59
808 819 2.567497 CCTTGGCTGCCAACACCAG 61.567 63.158 29.24 18.93 38.75 4.00
820 833 2.166254 CCAACACCAGCAACAAAACTCT 59.834 45.455 0.00 0.00 0.00 3.24
826 839 2.029918 CCAGCAACAAAACTCTAAGGCC 60.030 50.000 0.00 0.00 0.00 5.19
839 852 0.257616 TAAGGCCAAGGGTATGCACC 59.742 55.000 5.01 0.00 44.96 5.01
905 918 5.334569 GCTTTCTCTCGTGGTAGCTAGATAG 60.335 48.000 0.00 0.00 0.00 2.08
957 970 3.020274 CACTCTGAGAGGTTGCTAGCTA 58.980 50.000 17.23 5.31 33.35 3.32
959 972 4.496756 ACTCTGAGAGGTTGCTAGCTAGC 61.497 52.174 34.20 34.20 40.77 3.42
978 992 1.879796 GCTGGTTCTTCTCTGGTGGTG 60.880 57.143 0.00 0.00 0.00 4.17
1023 1037 4.008933 GTGGTCAGCAGAGCCCGT 62.009 66.667 5.81 0.00 41.53 5.28
1057 1071 1.518352 CCGTCATCGTCGCCATTGA 60.518 57.895 0.00 0.00 35.01 2.57
1059 1073 1.075979 CGTCATCGTCGCCATTGACA 61.076 55.000 13.78 0.00 38.68 3.58
1110 1124 1.191489 TGGCGGAGAGGATGTTCACA 61.191 55.000 0.00 0.00 0.00 3.58
1213 1227 1.805254 GCCATCTTGCACGATGCTT 59.195 52.632 23.94 0.00 45.31 3.91
1229 1243 1.202521 TGCTTATGATGATGACGGCGT 60.203 47.619 14.65 14.65 0.00 5.68
1379 1393 7.451731 ACAGAATCATGATAGGTAAAAGGGA 57.548 36.000 9.04 0.00 0.00 4.20
1387 1401 0.775542 AGGTAAAAGGGACCGGCTTT 59.224 50.000 0.00 0.00 42.21 3.51
1396 1410 1.172812 GGACCGGCTTTGCTTCAGTT 61.173 55.000 0.00 0.00 0.00 3.16
1401 1415 1.334869 CGGCTTTGCTTCAGTTTGACT 59.665 47.619 0.00 0.00 0.00 3.41
1402 1416 2.603173 CGGCTTTGCTTCAGTTTGACTC 60.603 50.000 0.00 0.00 0.00 3.36
1403 1417 2.620585 GGCTTTGCTTCAGTTTGACTCT 59.379 45.455 0.00 0.00 0.00 3.24
1453 1467 5.003096 ACCATGGAGAAGAAAGGATTGTT 57.997 39.130 21.47 0.00 0.00 2.83
1463 1477 8.135382 AGAAGAAAGGATTGTTGCTAGTAGTA 57.865 34.615 0.00 0.00 0.00 1.82
1486 1500 9.825972 AGTATGATTTTCTTGTTATTTGTGTCG 57.174 29.630 0.00 0.00 0.00 4.35
1490 1504 5.446143 TTTCTTGTTATTTGTGTCGGCAT 57.554 34.783 0.00 0.00 0.00 4.40
1508 1522 3.229552 GCATTTCAGTCGTTTCAGAAGC 58.770 45.455 0.00 0.00 0.00 3.86
1547 1565 5.056480 GGGGAAAAACAAACCTTGATCTTG 58.944 41.667 0.00 0.00 0.00 3.02
1582 1601 4.081476 CCCCATCTCCATTTTCTTTTCCAC 60.081 45.833 0.00 0.00 0.00 4.02
1593 1612 1.571457 TCTTTTCCACCCCCTGTTTCA 59.429 47.619 0.00 0.00 0.00 2.69
1938 1958 8.829746 AGGCTACATGGATTCTGAAATCATATA 58.170 33.333 0.00 0.00 42.66 0.86
2042 2093 5.221702 TGGGATTATCGAGCTCATTGATCAA 60.222 40.000 15.40 11.26 33.74 2.57
2120 2977 8.028354 CAGATGCAATGTTCCAACTTTGTAATA 58.972 33.333 15.60 5.20 42.62 0.98
2197 3133 3.310774 GCACAGCACCATGAGTTATGTAG 59.689 47.826 0.00 0.00 34.87 2.74
2294 3248 1.644509 GAAGGGGGCAGAACCATTTT 58.355 50.000 0.00 0.00 42.05 1.82
2298 3357 1.632589 GGGGCAGAACCATTTTGTCT 58.367 50.000 0.00 0.00 42.05 3.41
2362 3475 7.947890 CCTTTACTAGTTATCATCTCTCCCTCT 59.052 40.741 0.00 0.00 0.00 3.69
2579 4274 8.040716 AGTCAACATAAAGCAAATACTACACC 57.959 34.615 0.00 0.00 0.00 4.16
2658 4358 9.737844 AAATAAAATGGTGCCATGTTTCTTATT 57.262 25.926 11.48 9.46 35.65 1.40
2788 4491 2.914289 CCAGGGCATCCAGGTCTC 59.086 66.667 0.00 0.00 35.22 3.36
2793 4496 0.107643 GGGCATCCAGGTCTCTTAGC 59.892 60.000 0.00 0.00 0.00 3.09
2851 4554 3.515901 ACTCAGTCAGTTATCCCTTGTCC 59.484 47.826 0.00 0.00 26.56 4.02
2914 4617 2.286294 GCGGCAGTCAATTGATAGTCTG 59.714 50.000 12.12 14.41 0.00 3.51
2936 4639 2.977772 AGGCTCTACAGATCAACAGC 57.022 50.000 0.00 0.00 0.00 4.40
3048 4772 5.105351 AGTCGATTGATATGACACCAACAGA 60.105 40.000 0.00 0.00 35.09 3.41
3076 4800 0.886490 CGAGTTCCAGCCAGCAAAGT 60.886 55.000 0.00 0.00 0.00 2.66
3115 4840 1.680249 GGTCTGAGGGATTTGGACAGC 60.680 57.143 0.00 0.00 0.00 4.40
3175 4903 4.524328 TCTGAAGAACATCAGCACTCTACA 59.476 41.667 2.71 0.00 45.21 2.74
3217 4952 3.637432 CTGAGTTCTCTAAGCATAGCCG 58.363 50.000 1.53 0.00 0.00 5.52
3222 4957 0.601311 CTCTAAGCATAGCCGCACCC 60.601 60.000 0.00 0.00 0.00 4.61
3223 4958 1.048724 TCTAAGCATAGCCGCACCCT 61.049 55.000 0.00 0.00 0.00 4.34
3283 5214 0.692419 CCCTATGGGTGCAGAGGTCT 60.692 60.000 0.00 0.00 38.25 3.85
3319 5256 8.151596 TCCCTCCATTATTTAAACAAACAAACC 58.848 33.333 0.00 0.00 0.00 3.27
3335 5484 9.767228 ACAAACAAACCTATTAAACATAAACCC 57.233 29.630 0.00 0.00 0.00 4.11
3401 5550 5.071250 TCCTAGCACAAGTGTAGAGGAAAAA 59.929 40.000 13.74 0.00 34.35 1.94
3816 6740 4.655963 TCCCAACCTTTCTTCTCTGAATG 58.344 43.478 0.00 0.00 0.00 2.67
3899 6938 2.828933 GGAGAGTTCACTCCGCAAC 58.171 57.895 3.20 0.00 45.30 4.17
3960 7000 2.358898 GCTGACCTTGAAAAAGAGCACA 59.641 45.455 0.00 0.00 0.00 4.57
4025 7065 3.757493 CAGAATTGGAGAGCAAGCTTCTT 59.243 43.478 0.00 0.00 0.00 2.52
4035 7075 3.282021 AGCAAGCTTCTTCAGACAAACA 58.718 40.909 0.00 0.00 0.00 2.83
4133 7173 3.608316 ATGCGCCAAACAAATGGTAAT 57.392 38.095 4.18 0.00 42.75 1.89
4148 7209 7.613801 ACAAATGGTAATAGTGTATTTGGCTCA 59.386 33.333 0.00 0.00 40.94 4.26
4210 7273 2.922740 AGAGGCAACGGACAACTTTA 57.077 45.000 0.00 0.00 46.39 1.85
4716 7858 6.321181 TCCTTCTTGACAATAGCTTTGTTTGT 59.679 34.615 13.21 8.96 36.34 2.83
5103 8246 1.609239 CTGGGGTATCCTGCAAGCA 59.391 57.895 0.00 0.00 36.20 3.91
5174 8317 0.874390 CCAATGACACAGGTCCGTTG 59.126 55.000 0.00 0.00 43.65 4.10
5181 8324 3.181464 TGACACAGGTCCGTTGACAAATA 60.181 43.478 0.00 0.00 43.65 1.40
5183 8326 3.813166 ACACAGGTCCGTTGACAAATAAG 59.187 43.478 0.00 0.00 43.65 1.73
5197 8341 9.034544 GTTGACAAATAAGAAAATGAAGCACTT 57.965 29.630 0.00 0.00 0.00 3.16
5226 8370 1.317613 GATGCCAGTCACACCAACAA 58.682 50.000 0.00 0.00 0.00 2.83
5296 9052 4.568956 TGATATAATGATGGTGGTCAGCG 58.431 43.478 0.00 0.00 33.83 5.18
5302 9058 1.148157 GATGGTGGTCAGCGTCATCG 61.148 60.000 15.05 0.00 42.61 3.84
5329 9085 9.508567 CCTTTAGTTTAATAAGCTTGCATCTTC 57.491 33.333 9.86 0.00 0.00 2.87
5451 9207 1.075525 TCCCCCATGACCTACCTCG 60.076 63.158 0.00 0.00 0.00 4.63
5482 9238 6.016610 ACACACCATGAGTTAATACCAAACAC 60.017 38.462 0.00 0.00 0.00 3.32
5540 9296 4.640789 ACAGCAACCGTGATTTTTAACA 57.359 36.364 0.00 0.00 0.00 2.41
5549 9305 9.197694 CAACCGTGATTTTTAACATTCCATTTA 57.802 29.630 0.00 0.00 0.00 1.40
5562 9318 8.862325 AACATTCCATTTAATCTGTACAGTCA 57.138 30.769 21.99 4.68 0.00 3.41
5570 9326 8.830580 CATTTAATCTGTACAGTCATGTTAGGG 58.169 37.037 21.99 1.85 41.01 3.53
5574 9330 4.705507 TCTGTACAGTCATGTTAGGGAGTC 59.294 45.833 21.99 0.00 41.01 3.36
5612 9368 6.015772 TGCAAGTGTGTATAGTCTGTGTAGAA 60.016 38.462 0.00 0.00 34.01 2.10
5619 9375 9.990360 TGTGTATAGTCTGTGTAGAAAATTTCA 57.010 29.630 8.55 0.00 34.01 2.69
5639 9395 2.579410 TTTCCCCCACTTTAGCAGTC 57.421 50.000 0.00 0.00 30.92 3.51
5658 9414 3.316308 AGTCAGCGCTTTCTCAATGTTTT 59.684 39.130 7.50 0.00 0.00 2.43
5671 9427 0.692419 ATGTTTTGGGCCCACAACCA 60.692 50.000 38.63 29.34 36.21 3.67
5685 9441 4.389374 CCACAACCAAGAAGTGATGTACT 58.611 43.478 0.00 0.00 42.89 2.73
5700 9456 6.071221 AGTGATGTACTTACATGTTTCCGGTA 60.071 38.462 2.30 0.00 46.20 4.02
5810 9574 9.178758 GACATTTTAATTCCCTCTCAGTTATGT 57.821 33.333 0.00 0.00 0.00 2.29
5824 9588 6.037786 TCAGTTATGTAGAGTTGGGAGTTG 57.962 41.667 0.00 0.00 0.00 3.16
5910 9675 7.513132 CACAGACGGCTTATAATAATGTGATG 58.487 38.462 0.00 0.00 38.16 3.07
5936 9701 4.273235 CCATGAATTAGCTATGCACGTTCA 59.727 41.667 0.00 0.00 32.36 3.18
5937 9702 5.438117 CATGAATTAGCTATGCACGTTCAG 58.562 41.667 0.00 0.00 31.75 3.02
6007 9775 7.811282 TGCCATTTTTCAGGAGATAATAGGTA 58.189 34.615 0.00 0.00 0.00 3.08
6008 9776 7.719633 TGCCATTTTTCAGGAGATAATAGGTAC 59.280 37.037 0.00 0.00 0.00 3.34
6009 9777 7.939588 GCCATTTTTCAGGAGATAATAGGTACT 59.060 37.037 0.00 0.00 46.37 2.73
6116 9887 1.541233 CCCCAATCCACTAGCGCTAAG 60.541 57.143 19.37 13.56 0.00 2.18
6130 9901 6.927381 ACTAGCGCTAAGTTTCAAAGTAAAGA 59.073 34.615 19.37 0.00 0.00 2.52
6133 9904 4.839174 CGCTAAGTTTCAAAGTAAAGACGC 59.161 41.667 0.00 0.00 0.00 5.19
6164 9935 3.633986 CACAGAAGGAAGGCAAAGAAAGT 59.366 43.478 0.00 0.00 0.00 2.66
6165 9936 3.885901 ACAGAAGGAAGGCAAAGAAAGTC 59.114 43.478 0.00 0.00 0.00 3.01
6166 9937 3.885297 CAGAAGGAAGGCAAAGAAAGTCA 59.115 43.478 0.00 0.00 0.00 3.41
6167 9938 4.023365 CAGAAGGAAGGCAAAGAAAGTCAG 60.023 45.833 0.00 0.00 0.00 3.51
6168 9939 2.234143 AGGAAGGCAAAGAAAGTCAGC 58.766 47.619 0.00 0.00 0.00 4.26
6170 9941 1.604278 GAAGGCAAAGAAAGTCAGCGT 59.396 47.619 0.00 0.00 0.00 5.07
6171 9942 1.230324 AGGCAAAGAAAGTCAGCGTC 58.770 50.000 0.00 0.00 0.00 5.19
6172 9943 0.110644 GGCAAAGAAAGTCAGCGTCG 60.111 55.000 0.00 0.00 0.00 5.12
6173 9944 0.722799 GCAAAGAAAGTCAGCGTCGC 60.723 55.000 9.80 9.80 0.00 5.19
6174 9945 0.110644 CAAAGAAAGTCAGCGTCGCC 60.111 55.000 14.86 0.00 0.00 5.54
6175 9946 0.531974 AAAGAAAGTCAGCGTCGCCA 60.532 50.000 14.86 0.00 0.00 5.69
6176 9947 0.531974 AAGAAAGTCAGCGTCGCCAA 60.532 50.000 14.86 0.00 0.00 4.52
6177 9948 0.531974 AGAAAGTCAGCGTCGCCAAA 60.532 50.000 14.86 0.00 0.00 3.28
6178 9949 0.384353 GAAAGTCAGCGTCGCCAAAC 60.384 55.000 14.86 9.77 0.00 2.93
6179 9950 1.092921 AAAGTCAGCGTCGCCAAACA 61.093 50.000 14.86 0.00 0.00 2.83
6188 9959 1.064946 TCGCCAAACAAACGGCTTG 59.935 52.632 0.00 0.00 46.62 4.01
6194 9965 1.060409 CAAACAAACGGCTTGCAACAC 59.940 47.619 0.00 0.00 38.75 3.32
6221 9992 2.989196 GCACTTGCATGCCAAACAA 58.011 47.368 16.68 0.69 39.86 2.83
6223 9994 1.937278 CACTTGCATGCCAAACAACA 58.063 45.000 16.68 0.00 31.94 3.33
6235 10010 3.004419 GCCAAACAACAAAGGGTCTACTC 59.996 47.826 0.00 0.00 0.00 2.59
6236 10011 3.568430 CCAAACAACAAAGGGTCTACTCC 59.432 47.826 0.00 0.00 0.00 3.85
6246 10021 1.972075 GGGTCTACTCCCTAAGATGCC 59.028 57.143 0.00 0.00 43.85 4.40
6248 10023 3.181420 GGGTCTACTCCCTAAGATGCCTA 60.181 52.174 0.00 0.00 43.85 3.93
6249 10024 3.827876 GGTCTACTCCCTAAGATGCCTAC 59.172 52.174 0.00 0.00 0.00 3.18
6250 10025 3.827876 GTCTACTCCCTAAGATGCCTACC 59.172 52.174 0.00 0.00 0.00 3.18
6252 10027 4.918273 TCTACTCCCTAAGATGCCTACCTA 59.082 45.833 0.00 0.00 0.00 3.08
6253 10028 4.120946 ACTCCCTAAGATGCCTACCTAG 57.879 50.000 0.00 0.00 0.00 3.02
6255 10030 4.668812 ACTCCCTAAGATGCCTACCTAGTA 59.331 45.833 0.00 0.00 0.00 1.82
6256 10031 5.316453 ACTCCCTAAGATGCCTACCTAGTAT 59.684 44.000 0.00 0.00 0.00 2.12
6257 10032 5.828871 TCCCTAAGATGCCTACCTAGTATC 58.171 45.833 0.00 0.00 0.00 2.24
6259 10034 5.889289 CCCTAAGATGCCTACCTAGTATCTC 59.111 48.000 0.00 0.00 30.17 2.75
6260 10035 5.889289 CCTAAGATGCCTACCTAGTATCTCC 59.111 48.000 0.00 0.00 30.17 3.71
6261 10036 4.325084 AGATGCCTACCTAGTATCTCCC 57.675 50.000 0.00 0.00 0.00 4.30
6262 10037 3.926671 AGATGCCTACCTAGTATCTCCCT 59.073 47.826 0.00 0.00 0.00 4.20
6263 10038 4.358614 AGATGCCTACCTAGTATCTCCCTT 59.641 45.833 0.00 0.00 0.00 3.95
6264 10039 3.845860 TGCCTACCTAGTATCTCCCTTG 58.154 50.000 0.00 0.00 0.00 3.61
6265 10040 3.465966 TGCCTACCTAGTATCTCCCTTGA 59.534 47.826 0.00 0.00 0.00 3.02
6266 10041 4.083565 GCCTACCTAGTATCTCCCTTGAG 58.916 52.174 0.00 0.00 40.17 3.02
6267 10042 4.448054 GCCTACCTAGTATCTCCCTTGAGT 60.448 50.000 0.00 0.00 39.75 3.41
6268 10043 5.707495 CCTACCTAGTATCTCCCTTGAGTT 58.293 45.833 0.00 0.00 39.75 3.01
6269 10044 5.536916 CCTACCTAGTATCTCCCTTGAGTTG 59.463 48.000 0.00 0.00 39.75 3.16
6270 10045 3.707102 ACCTAGTATCTCCCTTGAGTTGC 59.293 47.826 0.00 0.00 39.75 4.17
6271 10046 3.964031 CCTAGTATCTCCCTTGAGTTGCT 59.036 47.826 0.00 0.00 39.75 3.91
6272 10047 4.038642 CCTAGTATCTCCCTTGAGTTGCTC 59.961 50.000 0.00 0.00 39.75 4.26
6273 10048 3.718723 AGTATCTCCCTTGAGTTGCTCT 58.281 45.455 0.00 0.00 39.75 4.09
6274 10049 3.450457 AGTATCTCCCTTGAGTTGCTCTG 59.550 47.826 0.00 0.00 39.75 3.35
6275 10050 0.979665 TCTCCCTTGAGTTGCTCTGG 59.020 55.000 0.00 0.93 39.75 3.86
6276 10051 0.676151 CTCCCTTGAGTTGCTCTGGC 60.676 60.000 0.00 0.00 34.90 4.85
6277 10052 1.676967 CCCTTGAGTTGCTCTGGCC 60.677 63.158 0.00 0.00 37.74 5.36
6278 10053 1.676967 CCTTGAGTTGCTCTGGCCC 60.677 63.158 0.00 0.00 37.74 5.80
6279 10054 1.073722 CTTGAGTTGCTCTGGCCCA 59.926 57.895 0.00 0.00 37.74 5.36
6280 10055 0.959372 CTTGAGTTGCTCTGGCCCAG 60.959 60.000 3.69 3.69 37.74 4.45
6281 10056 2.749441 GAGTTGCTCTGGCCCAGC 60.749 66.667 15.50 15.50 37.74 4.85
6282 10057 3.255397 AGTTGCTCTGGCCCAGCT 61.255 61.111 21.27 7.67 37.79 4.24
6283 10058 3.060615 GTTGCTCTGGCCCAGCTG 61.061 66.667 21.27 6.78 37.79 4.24
6284 10059 3.573229 TTGCTCTGGCCCAGCTGT 61.573 61.111 21.27 0.00 37.79 4.40
6285 10060 2.223443 TTGCTCTGGCCCAGCTGTA 61.223 57.895 21.27 0.00 37.79 2.74
6286 10061 1.778017 TTGCTCTGGCCCAGCTGTAA 61.778 55.000 21.27 4.49 37.79 2.41
6287 10062 1.746991 GCTCTGGCCCAGCTGTAAC 60.747 63.158 13.81 2.29 33.75 2.50
6288 10063 1.679311 CTCTGGCCCAGCTGTAACA 59.321 57.895 13.81 7.11 0.00 2.41
6289 10064 0.254178 CTCTGGCCCAGCTGTAACAT 59.746 55.000 13.81 0.00 0.00 2.71
6290 10065 0.698238 TCTGGCCCAGCTGTAACATT 59.302 50.000 13.81 0.00 0.00 2.71
6291 10066 1.075374 TCTGGCCCAGCTGTAACATTT 59.925 47.619 13.81 0.00 0.00 2.32
6292 10067 1.895131 CTGGCCCAGCTGTAACATTTT 59.105 47.619 13.81 0.00 0.00 1.82
6293 10068 1.892474 TGGCCCAGCTGTAACATTTTC 59.108 47.619 13.81 0.00 0.00 2.29
6294 10069 1.204704 GGCCCAGCTGTAACATTTTCC 59.795 52.381 13.81 0.00 0.00 3.13
6295 10070 1.892474 GCCCAGCTGTAACATTTTCCA 59.108 47.619 13.81 0.00 0.00 3.53
6296 10071 2.497273 GCCCAGCTGTAACATTTTCCAT 59.503 45.455 13.81 0.00 0.00 3.41
6297 10072 3.429410 GCCCAGCTGTAACATTTTCCATC 60.429 47.826 13.81 0.00 0.00 3.51
6298 10073 3.181497 CCCAGCTGTAACATTTTCCATCG 60.181 47.826 13.81 0.00 0.00 3.84
6299 10074 3.181497 CCAGCTGTAACATTTTCCATCGG 60.181 47.826 13.81 0.00 0.00 4.18
6300 10075 3.440173 CAGCTGTAACATTTTCCATCGGT 59.560 43.478 5.25 0.00 0.00 4.69
6301 10076 3.689649 AGCTGTAACATTTTCCATCGGTC 59.310 43.478 0.00 0.00 0.00 4.79
6302 10077 3.485216 GCTGTAACATTTTCCATCGGTCG 60.485 47.826 0.00 0.00 0.00 4.79
6303 10078 3.004171 TGTAACATTTTCCATCGGTCGG 58.996 45.455 0.00 0.00 0.00 4.79
6304 10079 1.459450 AACATTTTCCATCGGTCGGG 58.541 50.000 0.00 0.00 0.00 5.14
6305 10080 1.029947 ACATTTTCCATCGGTCGGGC 61.030 55.000 0.00 0.00 0.00 6.13
6306 10081 1.453197 ATTTTCCATCGGTCGGGCC 60.453 57.895 0.00 0.00 0.00 5.80
6325 10100 3.440415 GCACGGGCCTACCAAAGC 61.440 66.667 0.00 0.00 40.22 3.51
6330 10105 2.437895 GGCCTACCAAAGCCCGAC 60.438 66.667 0.00 0.00 43.76 4.79
6331 10106 2.818274 GCCTACCAAAGCCCGACG 60.818 66.667 0.00 0.00 0.00 5.12
6332 10107 2.818274 CCTACCAAAGCCCGACGC 60.818 66.667 0.00 0.00 37.98 5.19
6333 10108 2.047655 CTACCAAAGCCCGACGCA 60.048 61.111 0.00 0.00 41.38 5.24
6334 10109 1.669760 CTACCAAAGCCCGACGCAA 60.670 57.895 0.00 0.00 41.38 4.85
6335 10110 1.227883 TACCAAAGCCCGACGCAAA 60.228 52.632 0.00 0.00 41.38 3.68
6336 10111 0.818445 TACCAAAGCCCGACGCAAAA 60.818 50.000 0.00 0.00 41.38 2.44
6337 10112 1.066587 CCAAAGCCCGACGCAAAAA 59.933 52.632 0.00 0.00 41.38 1.94
6352 10127 2.600470 AAAAACCTGGGCCCGAGC 60.600 61.111 19.37 0.00 38.76 5.03
6382 10157 3.825143 CCATTGGGCCTAAAAATCAGG 57.175 47.619 5.31 0.00 36.16 3.86
6389 10164 2.967599 CCTAAAAATCAGGCCCAAGC 57.032 50.000 0.00 0.00 38.76 4.01
6402 10177 4.738998 CAAGCCCGGCCCATCACA 62.739 66.667 5.55 0.00 0.00 3.58
6403 10178 4.740822 AAGCCCGGCCCATCACAC 62.741 66.667 5.55 0.00 0.00 3.82
6406 10181 4.402528 CCCGGCCCATCACACGAA 62.403 66.667 0.00 0.00 0.00 3.85
6407 10182 2.359354 CCGGCCCATCACACGAAA 60.359 61.111 0.00 0.00 0.00 3.46
6408 10183 1.969064 CCGGCCCATCACACGAAAA 60.969 57.895 0.00 0.00 0.00 2.29
6409 10184 1.501741 CGGCCCATCACACGAAAAG 59.498 57.895 0.00 0.00 0.00 2.27
6410 10185 1.212751 GGCCCATCACACGAAAAGC 59.787 57.895 0.00 0.00 0.00 3.51
6411 10186 1.212751 GCCCATCACACGAAAAGCC 59.787 57.895 0.00 0.00 0.00 4.35
6412 10187 1.883021 CCCATCACACGAAAAGCCC 59.117 57.895 0.00 0.00 0.00 5.19
6413 10188 0.893270 CCCATCACACGAAAAGCCCA 60.893 55.000 0.00 0.00 0.00 5.36
6414 10189 0.240945 CCATCACACGAAAAGCCCAC 59.759 55.000 0.00 0.00 0.00 4.61
6415 10190 1.238439 CATCACACGAAAAGCCCACT 58.762 50.000 0.00 0.00 0.00 4.00
6416 10191 1.069022 CATCACACGAAAAGCCCACTG 60.069 52.381 0.00 0.00 0.00 3.66
6417 10192 0.817634 TCACACGAAAAGCCCACTGG 60.818 55.000 0.00 0.00 0.00 4.00
6442 10217 3.903208 GGCCAGGCCTCTTCATTAA 57.097 52.632 24.99 0.00 46.69 1.40
6443 10218 2.143876 GGCCAGGCCTCTTCATTAAA 57.856 50.000 24.99 0.00 46.69 1.52
6444 10219 1.751351 GGCCAGGCCTCTTCATTAAAC 59.249 52.381 24.99 0.00 46.69 2.01
6445 10220 2.621668 GGCCAGGCCTCTTCATTAAACT 60.622 50.000 24.99 0.00 46.69 2.66
6446 10221 2.424956 GCCAGGCCTCTTCATTAAACTG 59.575 50.000 0.00 0.00 0.00 3.16
6447 10222 2.424956 CCAGGCCTCTTCATTAAACTGC 59.575 50.000 0.00 0.00 0.00 4.40
6448 10223 2.096496 CAGGCCTCTTCATTAAACTGCG 59.904 50.000 0.00 0.00 0.00 5.18
6449 10224 2.027192 AGGCCTCTTCATTAAACTGCGA 60.027 45.455 0.00 0.00 0.00 5.10
6450 10225 2.747446 GGCCTCTTCATTAAACTGCGAA 59.253 45.455 0.00 0.00 0.00 4.70
6451 10226 3.426292 GGCCTCTTCATTAAACTGCGAAC 60.426 47.826 0.00 0.00 0.00 3.95
6452 10227 3.188460 GCCTCTTCATTAAACTGCGAACA 59.812 43.478 0.00 0.00 0.00 3.18
6453 10228 4.142600 GCCTCTTCATTAAACTGCGAACAT 60.143 41.667 0.00 0.00 0.00 2.71
6454 10229 5.327091 CCTCTTCATTAAACTGCGAACATG 58.673 41.667 0.00 0.00 0.00 3.21
6455 10230 5.122239 CCTCTTCATTAAACTGCGAACATGA 59.878 40.000 0.00 0.00 0.00 3.07
6456 10231 5.927030 TCTTCATTAAACTGCGAACATGAC 58.073 37.500 0.00 0.00 0.00 3.06
6457 10232 4.320667 TCATTAAACTGCGAACATGACG 57.679 40.909 0.00 6.19 0.00 4.35
6458 10233 3.124466 TCATTAAACTGCGAACATGACGG 59.876 43.478 15.62 3.90 0.00 4.79
6459 10234 1.434555 TAAACTGCGAACATGACGGG 58.565 50.000 15.62 0.00 0.00 5.28
6460 10235 1.852067 AAACTGCGAACATGACGGGC 61.852 55.000 15.62 7.31 0.00 6.13
6461 10236 3.499737 CTGCGAACATGACGGGCC 61.500 66.667 15.62 0.00 0.00 5.80
6464 10239 2.819595 CGAACATGACGGGCCCAG 60.820 66.667 24.92 17.36 0.00 4.45
6465 10240 3.134127 GAACATGACGGGCCCAGC 61.134 66.667 24.92 13.72 0.00 4.85
6499 10274 2.272471 GCAAGGCCAGGTAGGGTC 59.728 66.667 5.01 0.00 38.09 4.46
6500 10275 2.584608 CAAGGCCAGGTAGGGTCG 59.415 66.667 5.01 0.00 37.71 4.79
6501 10276 2.687566 AAGGCCAGGTAGGGTCGG 60.688 66.667 5.01 0.00 37.71 4.79
6502 10277 4.798682 AGGCCAGGTAGGGTCGGG 62.799 72.222 5.01 0.00 37.71 5.14
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
28 29 0.315568 TTAAATTTGGCGCCGCTTGT 59.684 45.000 23.90 9.56 0.00 3.16
54 55 2.365582 GGTACATTGGAACCGAAGCAT 58.634 47.619 0.00 0.00 0.00 3.79
213 218 1.002134 TTGGGCCTGACTAGCAAGC 60.002 57.895 4.53 0.00 33.06 4.01
294 303 1.302993 ATGGGGTCAACGTTTCCGG 60.303 57.895 0.00 0.00 38.78 5.14
311 320 0.975040 AAGACTCTGCTGGGCGAGAT 60.975 55.000 0.00 4.44 34.90 2.75
356 365 2.280628 GTACCGGCTTCTCATCTTTGG 58.719 52.381 0.00 0.00 0.00 3.28
393 402 1.305219 TGCCAGCGGTATCTTTGTGC 61.305 55.000 0.00 0.00 0.00 4.57
492 501 5.451242 CCATCTCTTTCAGTAGCTCTGGTAC 60.451 48.000 11.63 0.00 43.76 3.34
495 504 3.740764 GCCATCTCTTTCAGTAGCTCTGG 60.741 52.174 11.63 0.00 43.76 3.86
524 533 1.552792 AGAAGCTTCCTGGTCTGCTAC 59.447 52.381 22.81 0.00 35.09 3.58
531 541 1.003003 GCTTCTGAGAAGCTTCCTGGT 59.997 52.381 33.41 4.04 40.01 4.00
587 597 0.596577 TTCCGGCGGAGAAGATATCG 59.403 55.000 29.30 0.00 31.21 2.92
634 645 0.679960 CCAACCGGGGAATTCAGTCC 60.680 60.000 6.32 4.85 36.90 3.85
644 655 2.047560 GTCGTTCTCCAACCGGGG 60.048 66.667 6.32 0.00 37.22 5.73
645 656 2.047560 GGTCGTTCTCCAACCGGG 60.048 66.667 6.32 0.00 38.37 5.73
664 675 2.747855 GTTGGCCCCAGAGCTTCG 60.748 66.667 0.00 0.00 0.00 3.79
676 687 4.743493 TCAGAAACAAACAAGAAGTTGGC 58.257 39.130 0.00 0.00 41.19 4.52
698 709 5.634859 GGTCAATTTTTCTGTGAATGCGATT 59.365 36.000 0.00 0.00 0.00 3.34
702 713 3.996363 GGGGTCAATTTTTCTGTGAATGC 59.004 43.478 0.00 0.00 0.00 3.56
749 760 0.247460 GGAGGAGCAAACAAATGGCC 59.753 55.000 0.00 0.00 0.00 5.36
808 819 3.552890 CCTTGGCCTTAGAGTTTTGTTGC 60.553 47.826 3.32 0.00 0.00 4.17
820 833 0.257616 GGTGCATACCCTTGGCCTTA 59.742 55.000 3.32 0.00 41.36 2.69
839 852 7.766283 AGAGAAGAGGAAACAAAAGTGAAAAG 58.234 34.615 0.00 0.00 0.00 2.27
925 938 0.458197 CTCAGAGTGCAGCGAAGAGG 60.458 60.000 0.00 0.00 0.00 3.69
932 945 1.297456 GCAACCTCTCAGAGTGCAGC 61.297 60.000 11.52 1.83 33.65 5.25
957 970 0.689623 CCACCAGAGAAGAACCAGCT 59.310 55.000 0.00 0.00 0.00 4.24
959 972 1.271054 CCACCACCAGAGAAGAACCAG 60.271 57.143 0.00 0.00 0.00 4.00
961 974 0.606673 GCCACCACCAGAGAAGAACC 60.607 60.000 0.00 0.00 0.00 3.62
962 975 0.398318 AGCCACCACCAGAGAAGAAC 59.602 55.000 0.00 0.00 0.00 3.01
978 992 1.244816 GGAACCACCAACAGTTAGCC 58.755 55.000 0.00 0.00 38.79 3.93
1023 1037 3.717294 GGCGAAGGGAGGGAAGCA 61.717 66.667 0.00 0.00 0.00 3.91
1029 1043 2.107141 GATGACGGCGAAGGGAGG 59.893 66.667 16.62 0.00 0.00 4.30
1057 1071 2.685380 CCGAGGGGAGAAGGCTGT 60.685 66.667 0.00 0.00 34.06 4.40
1059 1073 2.364448 GACCGAGGGGAGAAGGCT 60.364 66.667 0.00 0.00 36.97 4.58
1155 1169 4.711949 AGGCTGGCGCTCCTGTTG 62.712 66.667 7.64 0.00 36.09 3.33
1213 1227 1.544246 CCCTACGCCGTCATCATCATA 59.456 52.381 0.00 0.00 0.00 2.15
1229 1243 0.750850 GGCGACATACAGCTTCCCTA 59.249 55.000 0.00 0.00 0.00 3.53
1379 1393 0.385390 CAAACTGAAGCAAAGCCGGT 59.615 50.000 1.90 0.00 0.00 5.28
1418 1432 3.021695 CTCCATGGTCAAGTTGATGCAT 58.978 45.455 12.58 0.00 0.00 3.96
1463 1477 6.586082 GCCGACACAAATAACAAGAAAATCAT 59.414 34.615 0.00 0.00 0.00 2.45
1481 1495 0.865769 AACGACTGAAATGCCGACAC 59.134 50.000 0.00 0.00 0.00 3.67
1486 1500 3.814945 CTTCTGAAACGACTGAAATGCC 58.185 45.455 0.00 0.00 0.00 4.40
1490 1504 5.499139 AAATGCTTCTGAAACGACTGAAA 57.501 34.783 0.00 0.00 0.00 2.69
1508 1522 5.766150 TTTCCCCATAGATACGCAAAATG 57.234 39.130 0.00 0.00 0.00 2.32
1593 1612 7.108194 TGTATCATTTCAGCAGATTCTCTTGT 58.892 34.615 0.00 0.00 0.00 3.16
1612 1631 6.753279 GCTTGCTGCTAATTTCATTTGTATCA 59.247 34.615 0.00 0.00 38.95 2.15
1646 1665 2.549754 AGCAACATCGAACAACAGAAGG 59.450 45.455 0.00 0.00 0.00 3.46
1744 1763 2.823829 CGCCGGCAACATTAGAGCC 61.824 63.158 28.98 0.00 44.89 4.70
1745 1764 2.709475 CGCCGGCAACATTAGAGC 59.291 61.111 28.98 0.00 0.00 4.09
1938 1958 8.414003 TGCTACTCTTAATTTCGTACAGATGAT 58.586 33.333 0.00 0.00 0.00 2.45
1954 1997 8.560355 TTGCATCTGTAAATTTGCTACTCTTA 57.440 30.769 7.80 0.00 36.10 2.10
1957 2000 5.741040 GCTTGCATCTGTAAATTTGCTACTC 59.259 40.000 7.80 0.00 36.10 2.59
2042 2093 6.531240 CCATAACAAGCTTTGTAATGCGATTT 59.469 34.615 0.00 0.00 44.59 2.17
2104 2961 9.191995 CATGAAACCTTATTACAAAGTTGGAAC 57.808 33.333 0.00 0.00 32.99 3.62
2197 3133 2.563471 ACAGGATTCGAGCGTCTAAC 57.437 50.000 0.00 0.00 0.00 2.34
2246 3196 1.455786 CACTTGTTAGAACAGCGGACG 59.544 52.381 0.00 0.00 40.50 4.79
2294 3248 8.197592 TGGGAGTTTTAAGTGAAGTATAGACA 57.802 34.615 0.00 0.00 0.00 3.41
2579 4274 3.913763 TCGAGCTGAAATTTGCAAATTCG 59.086 39.130 31.78 28.07 37.62 3.34
2658 4358 2.647299 TCAGTGGCCTCCCTGAAAAATA 59.353 45.455 15.19 0.00 34.88 1.40
2793 4496 0.322546 GGGTTGTTGGCCTGTAGAGG 60.323 60.000 3.32 0.31 43.19 3.69
2851 4554 3.170791 ACACTGTCTGCTATCAATCCG 57.829 47.619 0.00 0.00 0.00 4.18
2914 4617 4.116238 GCTGTTGATCTGTAGAGCCTAAC 58.884 47.826 0.00 0.00 0.00 2.34
3076 4800 1.285280 CCAATGAGGACCCACCAGTA 58.715 55.000 0.00 0.00 41.22 2.74
3115 4840 0.813184 GCACTGGTGAACCATCCATG 59.187 55.000 1.88 1.33 46.46 3.66
3175 4903 5.835819 TCAGCTCAGTCCAATATAGCTTACT 59.164 40.000 0.00 0.00 41.44 2.24
3401 5550 7.050377 CCATGTAGACATTCTATTGTCAACCT 58.950 38.462 7.28 0.00 46.81 3.50
3421 5570 4.322801 GGTTGAGAGTTACTACAGCCATGT 60.323 45.833 15.46 0.00 43.76 3.21
3520 6400 4.647564 ACTGAGACCTTGGTTGATCAAT 57.352 40.909 12.12 0.00 0.00 2.57
3960 7000 2.216046 CAGCTCGTTGCATACATGGAT 58.784 47.619 0.00 0.00 45.94 3.41
4025 7065 4.349636 TCTTCCATTAGGGTGTTTGTCTGA 59.650 41.667 0.00 0.00 38.11 3.27
4085 7125 3.084786 AGCTTCTTTAACAGCATGGTCC 58.915 45.455 0.00 0.00 43.62 4.46
4133 7173 5.046591 AGCACTAGTTGAGCCAAATACACTA 60.047 40.000 0.00 0.00 32.56 2.74
4148 7209 2.105821 TGTTAGGGCAACAGCACTAGTT 59.894 45.455 0.00 0.00 44.49 2.24
4210 7273 4.590222 ACTGCCAATCTTTTTGGAGTCATT 59.410 37.500 8.51 0.00 42.06 2.57
4716 7858 4.985538 AGATTCCAAAGTCTGCCAGTTTA 58.014 39.130 0.00 0.00 0.00 2.01
5103 8246 1.278985 TCGTCTGGGCAGTTCATCATT 59.721 47.619 0.00 0.00 0.00 2.57
5174 8317 8.801715 TCAAGTGCTTCATTTTCTTATTTGTC 57.198 30.769 0.00 0.00 0.00 3.18
5181 8324 7.384115 CACATGATTCAAGTGCTTCATTTTCTT 59.616 33.333 8.90 0.00 0.00 2.52
5183 8326 6.864685 TCACATGATTCAAGTGCTTCATTTTC 59.135 34.615 15.41 0.00 33.78 2.29
5197 8341 3.011818 GTGACTGGCATCACATGATTCA 58.988 45.455 18.78 0.00 46.89 2.57
5226 8370 9.871238 ACGACTGAATTGTAAACATAAGATAGT 57.129 29.630 0.00 0.00 0.00 2.12
5296 9052 7.247929 AGCTTATTAAACTAAAGGCGATGAC 57.752 36.000 0.00 0.00 0.00 3.06
5299 9055 6.094881 TGCAAGCTTATTAAACTAAAGGCGAT 59.905 34.615 0.00 0.00 0.00 4.58
5302 9058 7.484140 AGATGCAAGCTTATTAAACTAAAGGC 58.516 34.615 0.00 0.00 0.00 4.35
5318 9074 6.634436 CCTGAAAATATTACGAAGATGCAAGC 59.366 38.462 0.00 0.00 0.00 4.01
5329 9085 7.332926 CCCTCATGATCTCCTGAAAATATTACG 59.667 40.741 0.00 0.00 0.00 3.18
5399 9155 3.308402 CCCTTTGAAGCCAGTCCTTGATA 60.308 47.826 0.00 0.00 0.00 2.15
5451 9207 1.609208 AACTCATGGTGTGTGAAGCC 58.391 50.000 0.00 0.00 0.00 4.35
5482 9238 2.061028 GAATTGCAAAACGAAGGGCAG 58.939 47.619 1.71 0.00 37.59 4.85
5540 9296 9.466497 AACATGACTGTACAGATTAAATGGAAT 57.534 29.630 29.30 1.64 33.36 3.01
5549 9305 5.721960 ACTCCCTAACATGACTGTACAGATT 59.278 40.000 29.30 15.59 33.36 2.40
5555 9311 4.081642 GCTTGACTCCCTAACATGACTGTA 60.082 45.833 0.00 0.00 33.36 2.74
5556 9312 3.307059 GCTTGACTCCCTAACATGACTGT 60.307 47.826 0.00 0.00 37.12 3.55
5562 9318 4.019174 CCATTTGCTTGACTCCCTAACAT 58.981 43.478 0.00 0.00 0.00 2.71
5612 9368 8.843469 ACTGCTAAAGTGGGGGAAATGAAATTT 61.843 37.037 0.00 0.00 43.62 1.82
5618 9374 2.755103 GACTGCTAAAGTGGGGGAAATG 59.245 50.000 0.00 0.00 40.07 2.32
5619 9375 2.378547 TGACTGCTAAAGTGGGGGAAAT 59.621 45.455 0.00 0.00 40.07 2.17
5639 9395 2.727798 CCAAAACATTGAGAAAGCGCTG 59.272 45.455 12.58 0.00 0.00 5.18
5658 9414 1.152567 CTTCTTGGTTGTGGGCCCA 60.153 57.895 24.45 24.45 0.00 5.36
5671 9427 7.117812 CGGAAACATGTAAGTACATCACTTCTT 59.882 37.037 0.00 0.00 44.48 2.52
5695 9451 1.898902 TCCCAAACACATGTTACCGG 58.101 50.000 0.00 0.00 37.25 5.28
5700 9456 4.037923 GTCAGTTCATCCCAAACACATGTT 59.962 41.667 0.00 0.00 40.50 2.71
5810 9574 2.024176 TGCTCCAACTCCCAACTCTA 57.976 50.000 0.00 0.00 0.00 2.43
5812 9576 1.981256 TTTGCTCCAACTCCCAACTC 58.019 50.000 0.00 0.00 0.00 3.01
5824 9588 0.743097 GGACCATGCTGATTTGCTCC 59.257 55.000 0.00 0.00 0.00 4.70
5910 9675 3.187227 CGTGCATAGCTAATTCATGGGTC 59.813 47.826 0.00 0.00 0.00 4.46
5936 9701 5.614324 TGCCTGTATATGCAGTAAGAACT 57.386 39.130 18.08 0.00 35.91 3.01
5937 9702 5.991606 TCATGCCTGTATATGCAGTAAGAAC 59.008 40.000 18.08 3.10 41.46 3.01
6007 9775 8.715998 CACGAGTAGTACCGATAATAATGTAGT 58.284 37.037 15.24 0.00 0.00 2.73
6008 9776 7.691463 GCACGAGTAGTACCGATAATAATGTAG 59.309 40.741 15.24 0.00 0.00 2.74
6009 9777 7.361201 GGCACGAGTAGTACCGATAATAATGTA 60.361 40.741 15.24 0.00 0.00 2.29
6060 9828 5.518487 GTGAGTAAGAGCAGCTAAATGACTC 59.482 44.000 10.55 10.55 33.11 3.36
6116 9887 4.769215 ACGATGCGTCTTTACTTTGAAAC 58.231 39.130 4.05 0.00 33.69 2.78
6130 9901 1.531149 CCTTCTGTGAAAACGATGCGT 59.469 47.619 0.00 0.00 43.97 5.24
6133 9904 3.365364 GCCTTCCTTCTGTGAAAACGATG 60.365 47.826 0.00 0.00 0.00 3.84
6164 9935 1.353804 GTTTGTTTGGCGACGCTGA 59.646 52.632 20.77 5.66 0.00 4.26
6165 9936 2.003443 CGTTTGTTTGGCGACGCTG 61.003 57.895 20.77 0.00 0.00 5.18
6166 9937 2.326550 CGTTTGTTTGGCGACGCT 59.673 55.556 20.77 0.00 0.00 5.07
6167 9938 2.724358 CCGTTTGTTTGGCGACGC 60.724 61.111 12.43 12.43 34.41 5.19
6168 9939 2.724358 GCCGTTTGTTTGGCGACG 60.724 61.111 0.00 0.00 42.22 5.12
6173 9944 0.649993 GTTGCAAGCCGTTTGTTTGG 59.350 50.000 0.00 0.00 39.08 3.28
6174 9945 1.060409 GTGTTGCAAGCCGTTTGTTTG 59.940 47.619 0.00 0.00 39.08 2.93
6175 9946 1.337260 TGTGTTGCAAGCCGTTTGTTT 60.337 42.857 0.00 0.00 39.08 2.83
6176 9947 0.244994 TGTGTTGCAAGCCGTTTGTT 59.755 45.000 0.00 0.00 39.08 2.83
6177 9948 0.244994 TTGTGTTGCAAGCCGTTTGT 59.755 45.000 0.00 0.00 39.08 2.83
6178 9949 0.922717 CTTGTGTTGCAAGCCGTTTG 59.077 50.000 0.00 0.00 46.68 2.93
6179 9950 3.344064 CTTGTGTTGCAAGCCGTTT 57.656 47.368 0.00 0.00 46.68 3.60
6188 9959 1.884235 AGTGCCTACTCTTGTGTTGC 58.116 50.000 0.00 0.00 28.79 4.17
6194 9965 1.131883 GCATGCAAGTGCCTACTCTTG 59.868 52.381 14.21 4.04 45.78 3.02
6204 9975 1.937278 TGTTGTTTGGCATGCAAGTG 58.063 45.000 21.36 0.00 0.00 3.16
6235 10010 5.833340 AGATACTAGGTAGGCATCTTAGGG 58.167 45.833 0.00 0.00 30.01 3.53
6236 10011 5.889289 GGAGATACTAGGTAGGCATCTTAGG 59.111 48.000 0.00 0.00 32.66 2.69
6237 10012 5.889289 GGGAGATACTAGGTAGGCATCTTAG 59.111 48.000 0.00 0.00 32.66 2.18
6238 10013 5.556339 AGGGAGATACTAGGTAGGCATCTTA 59.444 44.000 0.00 0.00 32.66 2.10
6239 10014 4.358614 AGGGAGATACTAGGTAGGCATCTT 59.641 45.833 0.00 0.00 32.66 2.40
6241 10016 4.325084 AGGGAGATACTAGGTAGGCATC 57.675 50.000 0.00 0.00 0.00 3.91
6243 10018 3.465966 TCAAGGGAGATACTAGGTAGGCA 59.534 47.826 0.00 0.00 0.00 4.75
6244 10019 4.083565 CTCAAGGGAGATACTAGGTAGGC 58.916 52.174 0.00 0.00 44.26 3.93
6245 10020 5.327737 ACTCAAGGGAGATACTAGGTAGG 57.672 47.826 0.00 0.00 44.26 3.18
6246 10021 5.010213 GCAACTCAAGGGAGATACTAGGTAG 59.990 48.000 0.00 0.00 44.26 3.18
6248 10023 3.707102 GCAACTCAAGGGAGATACTAGGT 59.293 47.826 0.00 0.00 44.26 3.08
6249 10024 3.964031 AGCAACTCAAGGGAGATACTAGG 59.036 47.826 0.00 0.00 44.26 3.02
6250 10025 4.892934 AGAGCAACTCAAGGGAGATACTAG 59.107 45.833 0.00 0.00 44.26 2.57
6252 10027 3.450457 CAGAGCAACTCAAGGGAGATACT 59.550 47.826 0.00 0.00 44.26 2.12
6253 10028 3.431486 CCAGAGCAACTCAAGGGAGATAC 60.431 52.174 0.00 0.00 44.26 2.24
6255 10030 1.558756 CCAGAGCAACTCAAGGGAGAT 59.441 52.381 0.00 0.00 44.26 2.75
6256 10031 0.979665 CCAGAGCAACTCAAGGGAGA 59.020 55.000 0.00 0.00 44.26 3.71
6257 10032 0.676151 GCCAGAGCAACTCAAGGGAG 60.676 60.000 7.82 0.00 42.36 4.30
6259 10034 1.676967 GGCCAGAGCAACTCAAGGG 60.677 63.158 0.00 3.02 42.56 3.95
6260 10035 1.676967 GGGCCAGAGCAACTCAAGG 60.677 63.158 4.39 0.06 42.56 3.61
6261 10036 0.959372 CTGGGCCAGAGCAACTCAAG 60.959 60.000 29.96 0.00 42.56 3.02
6262 10037 1.073722 CTGGGCCAGAGCAACTCAA 59.926 57.895 29.96 0.00 42.56 3.02
6263 10038 2.752358 CTGGGCCAGAGCAACTCA 59.248 61.111 29.96 0.00 42.56 3.41
6264 10039 2.749441 GCTGGGCCAGAGCAACTC 60.749 66.667 37.07 13.52 42.56 3.01
6265 10040 3.255397 AGCTGGGCCAGAGCAACT 61.255 61.111 37.07 20.48 42.56 3.16
6266 10041 2.469465 TACAGCTGGGCCAGAGCAAC 62.469 60.000 37.07 18.43 42.56 4.17
6267 10042 1.778017 TTACAGCTGGGCCAGAGCAA 61.778 55.000 37.07 20.84 42.56 3.91
6268 10043 2.223443 TTACAGCTGGGCCAGAGCA 61.223 57.895 37.07 16.06 42.56 4.26
6269 10044 1.746991 GTTACAGCTGGGCCAGAGC 60.747 63.158 37.07 23.42 36.65 4.09
6270 10045 0.254178 ATGTTACAGCTGGGCCAGAG 59.746 55.000 37.07 27.87 32.44 3.35
6271 10046 0.698238 AATGTTACAGCTGGGCCAGA 59.302 50.000 37.07 14.73 32.44 3.86
6272 10047 1.549203 AAATGTTACAGCTGGGCCAG 58.451 50.000 29.44 29.44 34.12 4.85
6273 10048 1.892474 GAAAATGTTACAGCTGGGCCA 59.108 47.619 19.93 5.85 0.00 5.36
6274 10049 1.204704 GGAAAATGTTACAGCTGGGCC 59.795 52.381 19.93 0.00 0.00 5.80
6275 10050 1.892474 TGGAAAATGTTACAGCTGGGC 59.108 47.619 19.93 8.05 0.00 5.36
6276 10051 3.181497 CGATGGAAAATGTTACAGCTGGG 60.181 47.826 19.93 0.00 31.32 4.45
6277 10052 3.181497 CCGATGGAAAATGTTACAGCTGG 60.181 47.826 19.93 0.00 31.32 4.85
6278 10053 3.440173 ACCGATGGAAAATGTTACAGCTG 59.560 43.478 13.48 13.48 31.32 4.24
6279 10054 3.686016 ACCGATGGAAAATGTTACAGCT 58.314 40.909 0.00 0.00 31.32 4.24
6280 10055 3.485216 CGACCGATGGAAAATGTTACAGC 60.485 47.826 0.00 0.00 28.53 4.40
6281 10056 3.063452 CCGACCGATGGAAAATGTTACAG 59.937 47.826 0.00 0.00 28.53 2.74
6282 10057 3.004171 CCGACCGATGGAAAATGTTACA 58.996 45.455 0.00 0.00 30.03 2.41
6283 10058 2.353579 CCCGACCGATGGAAAATGTTAC 59.646 50.000 0.00 0.00 0.00 2.50
6284 10059 2.634600 CCCGACCGATGGAAAATGTTA 58.365 47.619 0.00 0.00 0.00 2.41
6285 10060 1.459450 CCCGACCGATGGAAAATGTT 58.541 50.000 0.00 0.00 0.00 2.71
6286 10061 1.029947 GCCCGACCGATGGAAAATGT 61.030 55.000 0.00 0.00 0.00 2.71
6287 10062 1.724582 GGCCCGACCGATGGAAAATG 61.725 60.000 0.00 0.00 0.00 2.32
6288 10063 1.453197 GGCCCGACCGATGGAAAAT 60.453 57.895 0.00 0.00 0.00 1.82
6289 10064 2.045731 GGCCCGACCGATGGAAAA 60.046 61.111 0.00 0.00 0.00 2.29
6308 10083 3.440415 GCTTTGGTAGGCCCGTGC 61.440 66.667 0.00 0.00 35.15 5.34
6309 10084 2.750237 GGCTTTGGTAGGCCCGTG 60.750 66.667 0.00 0.00 43.40 4.94
6315 10090 2.818274 GCGTCGGGCTTTGGTAGG 60.818 66.667 0.00 0.00 39.11 3.18
6316 10091 1.231958 TTTGCGTCGGGCTTTGGTAG 61.232 55.000 0.00 0.00 44.05 3.18
6317 10092 0.818445 TTTTGCGTCGGGCTTTGGTA 60.818 50.000 0.00 0.00 44.05 3.25
6318 10093 1.668101 TTTTTGCGTCGGGCTTTGGT 61.668 50.000 0.00 0.00 44.05 3.67
6319 10094 1.066587 TTTTTGCGTCGGGCTTTGG 59.933 52.632 0.00 0.00 44.05 3.28
6320 10095 4.719997 TTTTTGCGTCGGGCTTTG 57.280 50.000 0.00 0.00 44.05 2.77
6335 10110 2.600470 GCTCGGGCCCAGGTTTTT 60.600 61.111 24.92 0.00 0.00 1.94
6362 10137 3.825143 CCTGATTTTTAGGCCCAATGG 57.175 47.619 0.00 0.00 0.00 3.16
6370 10145 2.967599 GCTTGGGCCTGATTTTTAGG 57.032 50.000 4.53 0.00 38.39 2.69
6385 10160 4.738998 TGTGATGGGCCGGGCTTG 62.739 66.667 28.80 0.00 0.00 4.01
6386 10161 4.740822 GTGTGATGGGCCGGGCTT 62.741 66.667 28.80 15.95 0.00 4.35
6389 10164 3.910914 TTTCGTGTGATGGGCCGGG 62.911 63.158 2.18 0.00 0.00 5.73
6390 10165 1.922135 CTTTTCGTGTGATGGGCCGG 61.922 60.000 0.00 0.00 0.00 6.13
6391 10166 1.501741 CTTTTCGTGTGATGGGCCG 59.498 57.895 0.00 0.00 0.00 6.13
6392 10167 1.212751 GCTTTTCGTGTGATGGGCC 59.787 57.895 0.00 0.00 0.00 5.80
6393 10168 1.212751 GGCTTTTCGTGTGATGGGC 59.787 57.895 0.00 0.00 0.00 5.36
6394 10169 0.893270 TGGGCTTTTCGTGTGATGGG 60.893 55.000 0.00 0.00 0.00 4.00
6395 10170 0.240945 GTGGGCTTTTCGTGTGATGG 59.759 55.000 0.00 0.00 0.00 3.51
6396 10171 1.069022 CAGTGGGCTTTTCGTGTGATG 60.069 52.381 0.00 0.00 0.00 3.07
6397 10172 1.238439 CAGTGGGCTTTTCGTGTGAT 58.762 50.000 0.00 0.00 0.00 3.06
6398 10173 0.817634 CCAGTGGGCTTTTCGTGTGA 60.818 55.000 0.00 0.00 0.00 3.58
6399 10174 1.654220 CCAGTGGGCTTTTCGTGTG 59.346 57.895 0.00 0.00 0.00 3.82
6400 10175 1.528309 CCCAGTGGGCTTTTCGTGT 60.528 57.895 17.33 0.00 35.35 4.49
6401 10176 3.354678 CCCAGTGGGCTTTTCGTG 58.645 61.111 17.33 0.00 35.35 4.35
6425 10200 2.424956 CAGTTTAATGAAGAGGCCTGGC 59.575 50.000 12.00 11.05 0.00 4.85
6426 10201 2.424956 GCAGTTTAATGAAGAGGCCTGG 59.575 50.000 12.00 0.00 0.00 4.45
6427 10202 2.096496 CGCAGTTTAATGAAGAGGCCTG 59.904 50.000 12.00 0.00 0.00 4.85
6428 10203 2.027192 TCGCAGTTTAATGAAGAGGCCT 60.027 45.455 3.86 3.86 0.00 5.19
6429 10204 2.356135 TCGCAGTTTAATGAAGAGGCC 58.644 47.619 0.00 0.00 0.00 5.19
6430 10205 3.188460 TGTTCGCAGTTTAATGAAGAGGC 59.812 43.478 0.00 0.00 0.00 4.70
6431 10206 5.122239 TCATGTTCGCAGTTTAATGAAGAGG 59.878 40.000 0.00 0.00 0.00 3.69
6432 10207 6.017933 GTCATGTTCGCAGTTTAATGAAGAG 58.982 40.000 0.00 0.00 0.00 2.85
6433 10208 5.389411 CGTCATGTTCGCAGTTTAATGAAGA 60.389 40.000 0.00 0.00 0.00 2.87
6434 10209 4.783036 CGTCATGTTCGCAGTTTAATGAAG 59.217 41.667 0.00 0.00 0.00 3.02
6435 10210 4.377943 CCGTCATGTTCGCAGTTTAATGAA 60.378 41.667 7.34 0.00 0.00 2.57
6436 10211 3.124466 CCGTCATGTTCGCAGTTTAATGA 59.876 43.478 7.34 0.00 0.00 2.57
6437 10212 3.416277 CCGTCATGTTCGCAGTTTAATG 58.584 45.455 7.34 0.00 0.00 1.90
6438 10213 2.418628 CCCGTCATGTTCGCAGTTTAAT 59.581 45.455 7.34 0.00 0.00 1.40
6439 10214 1.801771 CCCGTCATGTTCGCAGTTTAA 59.198 47.619 7.34 0.00 0.00 1.52
6440 10215 1.434555 CCCGTCATGTTCGCAGTTTA 58.565 50.000 7.34 0.00 0.00 2.01
6441 10216 1.852067 GCCCGTCATGTTCGCAGTTT 61.852 55.000 7.34 0.00 0.00 2.66
6442 10217 2.325082 GCCCGTCATGTTCGCAGTT 61.325 57.895 7.34 0.00 0.00 3.16
6443 10218 2.742372 GCCCGTCATGTTCGCAGT 60.742 61.111 7.34 0.00 0.00 4.40
6444 10219 3.499737 GGCCCGTCATGTTCGCAG 61.500 66.667 0.00 3.48 0.00 5.18
6447 10222 2.819595 CTGGGCCCGTCATGTTCG 60.820 66.667 19.37 0.00 0.00 3.95
6448 10223 3.134127 GCTGGGCCCGTCATGTTC 61.134 66.667 19.37 0.00 0.00 3.18
6449 10224 4.740822 GGCTGGGCCCGTCATGTT 62.741 66.667 19.37 0.00 44.06 2.71
6482 10257 2.272471 GACCCTACCTGGCCTTGC 59.728 66.667 3.32 0.00 0.00 4.01
6483 10258 2.584608 CGACCCTACCTGGCCTTG 59.415 66.667 3.32 0.00 0.00 3.61
6484 10259 2.687566 CCGACCCTACCTGGCCTT 60.688 66.667 3.32 0.00 0.00 4.35
6485 10260 4.798682 CCCGACCCTACCTGGCCT 62.799 72.222 3.32 0.00 0.00 5.19


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.