Multiple sequence alignment - TraesCS5B01G292300

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G292300 chr5B 100.000 3543 0 0 1 3543 477964033 477967575 0.000000e+00 6543.0
1 TraesCS5B01G292300 chr5B 76.566 1421 262 46 1145 2533 47122480 47123861 0.000000e+00 713.0
2 TraesCS5B01G292300 chr5B 77.974 908 136 43 1445 2306 477984388 477985277 8.770000e-141 510.0
3 TraesCS5B01G292300 chr5B 77.500 920 162 25 1622 2533 502021497 502022379 8.770000e-141 510.0
4 TraesCS5B01G292300 chr5B 95.266 169 8 0 149 317 247548595 247548763 5.830000e-68 268.0
5 TraesCS5B01G292300 chr5B 96.667 60 2 0 624 683 126250679 126250738 2.250000e-17 100.0
6 TraesCS5B01G292300 chr5B 97.143 35 1 0 826 860 477964757 477964791 3.820000e-05 60.2
7 TraesCS5B01G292300 chr5B 97.143 35 1 0 725 759 477964858 477964892 3.820000e-05 60.2
8 TraesCS5B01G292300 chr5D 93.568 1508 91 2 1026 2533 397929678 397931179 0.000000e+00 2242.0
9 TraesCS5B01G292300 chr5D 76.803 1414 263 42 1145 2533 46067418 46068791 0.000000e+00 734.0
10 TraesCS5B01G292300 chr5D 88.931 524 51 6 2531 3052 397931224 397931742 1.070000e-179 640.0
11 TraesCS5B01G292300 chr5D 78.070 684 129 18 1127 1797 415629608 415630283 2.550000e-111 412.0
12 TraesCS5B01G292300 chr5D 81.136 493 43 28 3073 3543 397931734 397932198 2.020000e-92 350.0
13 TraesCS5B01G292300 chr5D 84.424 321 25 14 317 627 397929096 397929401 3.460000e-75 292.0
14 TraesCS5B01G292300 chr5D 91.912 136 9 1 687 820 397929399 397929534 4.670000e-44 189.0
15 TraesCS5B01G292300 chr5D 85.350 157 9 3 1 156 397928951 397929094 2.200000e-32 150.0
16 TraesCS5B01G292300 chr5D 88.732 71 5 3 848 916 397929527 397929596 2.270000e-12 84.2
17 TraesCS5B01G292300 chr5D 89.091 55 6 0 2619 2673 375407244 375407190 6.350000e-08 69.4
18 TraesCS5B01G292300 chr5D 100.000 35 0 0 826 860 397929439 397929473 8.210000e-07 65.8
19 TraesCS5B01G292300 chr5A 94.469 1374 67 3 1160 2533 503050094 503051458 0.000000e+00 2108.0
20 TraesCS5B01G292300 chr5A 90.000 750 56 12 2531 3274 503051503 503052239 0.000000e+00 952.0
21 TraesCS5B01G292300 chr5A 77.865 1152 209 31 1127 2274 528269217 528270326 0.000000e+00 673.0
22 TraesCS5B01G292300 chr5A 76.003 1421 264 53 1146 2533 37081201 37082577 0.000000e+00 664.0
23 TraesCS5B01G292300 chr5A 87.273 55 7 0 2619 2673 476691337 476691283 2.950000e-06 63.9
24 TraesCS5B01G292300 chr1B 96.364 165 6 0 152 316 18682041 18681877 4.510000e-69 272.0
25 TraesCS5B01G292300 chr1B 95.783 166 7 0 152 317 148280810 148280645 5.830000e-68 268.0
26 TraesCS5B01G292300 chr1B 96.341 164 5 1 153 316 548019957 548019795 5.830000e-68 268.0
27 TraesCS5B01G292300 chr1B 91.304 69 5 1 615 682 533863051 533863119 3.770000e-15 93.5
28 TraesCS5B01G292300 chr6B 95.266 169 8 0 149 317 221189285 221189453 5.830000e-68 268.0
29 TraesCS5B01G292300 chr4B 95.783 166 7 0 152 317 31736094 31735929 5.830000e-68 268.0
30 TraesCS5B01G292300 chr4B 95.783 166 7 0 151 316 98363263 98363098 5.830000e-68 268.0
31 TraesCS5B01G292300 chr3B 96.319 163 6 0 157 319 229821407 229821245 5.830000e-68 268.0
32 TraesCS5B01G292300 chr3B 87.356 87 6 4 626 711 373516199 373516117 1.050000e-15 95.3
33 TraesCS5B01G292300 chr1D 95.181 166 8 0 152 317 82688122 82687957 2.710000e-66 263.0
34 TraesCS5B01G292300 chr7D 91.892 74 4 2 609 682 498267328 498267257 6.260000e-18 102.0
35 TraesCS5B01G292300 chr6D 95.161 62 3 0 622 683 90112234 90112295 8.090000e-17 99.0
36 TraesCS5B01G292300 chr2B 95.161 62 3 0 621 682 556196618 556196557 8.090000e-17 99.0
37 TraesCS5B01G292300 chr2B 85.542 83 11 1 602 683 721702694 721702776 6.300000e-13 86.1
38 TraesCS5B01G292300 chr4D 95.082 61 3 0 622 682 116279911 116279851 2.910000e-16 97.1
39 TraesCS5B01G292300 chr3A 92.424 66 5 0 626 691 533631198 533631133 1.050000e-15 95.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G292300 chr5B 477964033 477967575 3542 False 2221.133333 6543 98.095333 1 3543 3 chr5B.!!$F6 3542
1 TraesCS5B01G292300 chr5B 47122480 47123861 1381 False 713.000000 713 76.566000 1145 2533 1 chr5B.!!$F1 1388
2 TraesCS5B01G292300 chr5B 477984388 477985277 889 False 510.000000 510 77.974000 1445 2306 1 chr5B.!!$F4 861
3 TraesCS5B01G292300 chr5B 502021497 502022379 882 False 510.000000 510 77.500000 1622 2533 1 chr5B.!!$F5 911
4 TraesCS5B01G292300 chr5D 46067418 46068791 1373 False 734.000000 734 76.803000 1145 2533 1 chr5D.!!$F1 1388
5 TraesCS5B01G292300 chr5D 397928951 397932198 3247 False 501.625000 2242 89.256625 1 3543 8 chr5D.!!$F3 3542
6 TraesCS5B01G292300 chr5D 415629608 415630283 675 False 412.000000 412 78.070000 1127 1797 1 chr5D.!!$F2 670
7 TraesCS5B01G292300 chr5A 503050094 503052239 2145 False 1530.000000 2108 92.234500 1160 3274 2 chr5A.!!$F3 2114
8 TraesCS5B01G292300 chr5A 528269217 528270326 1109 False 673.000000 673 77.865000 1127 2274 1 chr5A.!!$F2 1147
9 TraesCS5B01G292300 chr5A 37081201 37082577 1376 False 664.000000 664 76.003000 1146 2533 1 chr5A.!!$F1 1387

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
529 539 0.455972 CATTAGTTTTGTGGGGCGCG 60.456 55.0 0.00 0.0 0.00 6.86 F
544 554 0.996727 GCGCGTAACCAAGTTTGCTG 60.997 55.0 8.43 0.0 0.00 4.41 F
2131 2227 0.107214 TGCAGGTAGCCAATACAGCC 60.107 55.0 0.00 0.0 44.83 4.85 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1885 1942 0.171231 TCAGTCGCAGTGAATCTCCG 59.829 55.0 0.00 0.0 0.0 4.63 R
2510 2621 0.678048 GACACCAGCTCAACCATCCC 60.678 60.0 0.00 0.0 0.0 3.85 R
3379 3544 0.248289 GCGTGGAGGCCTTGTAAGTA 59.752 55.0 6.77 0.0 0.0 2.24 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 2.409948 ACTATGACCTTTGCCTCAGC 57.590 50.000 0.00 0.00 40.48 4.26
34 35 2.003301 GCCTCAGCAAGTAACTGTAGC 58.997 52.381 0.00 0.00 39.53 3.58
54 55 4.392047 AGCTGACAACTTGACATCATGAA 58.608 39.130 0.00 0.00 0.00 2.57
59 60 3.691118 ACAACTTGACATCATGAATCCCG 59.309 43.478 0.00 0.00 0.00 5.14
60 61 3.912496 ACTTGACATCATGAATCCCGA 57.088 42.857 0.00 0.00 0.00 5.14
61 62 4.428294 ACTTGACATCATGAATCCCGAT 57.572 40.909 0.00 0.00 0.00 4.18
62 63 4.785301 ACTTGACATCATGAATCCCGATT 58.215 39.130 0.00 0.00 0.00 3.34
63 64 4.818546 ACTTGACATCATGAATCCCGATTC 59.181 41.667 9.98 9.98 45.55 2.52
64 65 3.743521 TGACATCATGAATCCCGATTCC 58.256 45.455 13.51 0.00 44.93 3.01
65 66 3.077359 GACATCATGAATCCCGATTCCC 58.923 50.000 13.51 0.00 44.93 3.97
67 68 3.139025 ACATCATGAATCCCGATTCCCTT 59.861 43.478 13.51 0.00 44.93 3.95
68 69 3.492102 TCATGAATCCCGATTCCCTTC 57.508 47.619 13.51 0.00 44.93 3.46
69 70 2.106511 TCATGAATCCCGATTCCCTTCC 59.893 50.000 13.51 0.00 44.93 3.46
70 71 1.590591 TGAATCCCGATTCCCTTCCA 58.409 50.000 13.51 0.00 44.93 3.53
71 72 2.135189 TGAATCCCGATTCCCTTCCAT 58.865 47.619 13.51 0.00 44.93 3.41
72 73 3.322862 TGAATCCCGATTCCCTTCCATA 58.677 45.455 13.51 0.00 44.93 2.74
73 74 3.916349 TGAATCCCGATTCCCTTCCATAT 59.084 43.478 13.51 0.00 44.93 1.78
111 112 6.542735 GTCTAAAATCACAATACCTCCCTTCC 59.457 42.308 0.00 0.00 0.00 3.46
113 114 2.661176 TCACAATACCTCCCTTCCCT 57.339 50.000 0.00 0.00 0.00 4.20
114 115 2.196595 TCACAATACCTCCCTTCCCTG 58.803 52.381 0.00 0.00 0.00 4.45
115 116 1.916181 CACAATACCTCCCTTCCCTGT 59.084 52.381 0.00 0.00 0.00 4.00
116 117 1.916181 ACAATACCTCCCTTCCCTGTG 59.084 52.381 0.00 0.00 0.00 3.66
117 118 2.196595 CAATACCTCCCTTCCCTGTGA 58.803 52.381 0.00 0.00 0.00 3.58
118 119 2.576191 CAATACCTCCCTTCCCTGTGAA 59.424 50.000 0.00 0.00 0.00 3.18
131 132 4.018490 TCCCTGTGAATGTGATCCATTTG 58.982 43.478 9.79 3.68 43.87 2.32
134 135 3.433343 TGTGAATGTGATCCATTTGGCT 58.567 40.909 9.79 0.00 43.87 4.75
146 147 2.755103 CCATTTGGCTACAGGTTCTTCC 59.245 50.000 0.00 0.00 0.00 3.46
156 157 6.346096 GCTACAGGTTCTTCCATGTGTATTA 58.654 40.000 0.00 0.00 39.02 0.98
157 158 6.258068 GCTACAGGTTCTTCCATGTGTATTAC 59.742 42.308 0.00 0.00 39.02 1.89
158 159 6.374417 ACAGGTTCTTCCATGTGTATTACT 57.626 37.500 0.00 0.00 39.02 2.24
159 160 6.407202 ACAGGTTCTTCCATGTGTATTACTC 58.593 40.000 0.00 0.00 39.02 2.59
160 161 5.817816 CAGGTTCTTCCATGTGTATTACTCC 59.182 44.000 0.00 0.00 39.02 3.85
161 162 5.104485 AGGTTCTTCCATGTGTATTACTCCC 60.104 44.000 0.00 0.00 39.02 4.30
162 163 5.104485 GGTTCTTCCATGTGTATTACTCCCT 60.104 44.000 0.00 0.00 35.97 4.20
163 164 5.871396 TCTTCCATGTGTATTACTCCCTC 57.129 43.478 0.00 0.00 0.00 4.30
164 165 4.654262 TCTTCCATGTGTATTACTCCCTCC 59.346 45.833 0.00 0.00 0.00 4.30
165 166 2.963101 TCCATGTGTATTACTCCCTCCG 59.037 50.000 0.00 0.00 0.00 4.63
166 167 2.698797 CCATGTGTATTACTCCCTCCGT 59.301 50.000 0.00 0.00 0.00 4.69
167 168 3.134081 CCATGTGTATTACTCCCTCCGTT 59.866 47.826 0.00 0.00 0.00 4.44
168 169 4.369182 CATGTGTATTACTCCCTCCGTTC 58.631 47.826 0.00 0.00 0.00 3.95
169 170 2.762327 TGTGTATTACTCCCTCCGTTCC 59.238 50.000 0.00 0.00 0.00 3.62
170 171 3.029570 GTGTATTACTCCCTCCGTTCCT 58.970 50.000 0.00 0.00 0.00 3.36
171 172 4.210331 GTGTATTACTCCCTCCGTTCCTA 58.790 47.826 0.00 0.00 0.00 2.94
172 173 4.646492 GTGTATTACTCCCTCCGTTCCTAA 59.354 45.833 0.00 0.00 0.00 2.69
173 174 5.127682 GTGTATTACTCCCTCCGTTCCTAAA 59.872 44.000 0.00 0.00 0.00 1.85
174 175 5.901276 TGTATTACTCCCTCCGTTCCTAAAT 59.099 40.000 0.00 0.00 0.00 1.40
175 176 7.014615 GTGTATTACTCCCTCCGTTCCTAAATA 59.985 40.741 0.00 0.00 0.00 1.40
176 177 7.731688 TGTATTACTCCCTCCGTTCCTAAATAT 59.268 37.037 0.00 0.00 0.00 1.28
177 178 9.247861 GTATTACTCCCTCCGTTCCTAAATATA 57.752 37.037 0.00 0.00 0.00 0.86
178 179 8.731591 ATTACTCCCTCCGTTCCTAAATATAA 57.268 34.615 0.00 0.00 0.00 0.98
179 180 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
180 181 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
181 182 6.041751 ACTCCCTCCGTTCCTAAATATAAGTG 59.958 42.308 0.00 0.00 0.00 3.16
182 183 5.901276 TCCCTCCGTTCCTAAATATAAGTGT 59.099 40.000 0.00 0.00 0.00 3.55
183 184 6.384886 TCCCTCCGTTCCTAAATATAAGTGTT 59.615 38.462 0.00 0.00 0.00 3.32
184 185 7.052248 CCCTCCGTTCCTAAATATAAGTGTTT 58.948 38.462 0.00 0.00 0.00 2.83
185 186 8.206189 CCCTCCGTTCCTAAATATAAGTGTTTA 58.794 37.037 0.00 0.00 0.00 2.01
186 187 9.774413 CCTCCGTTCCTAAATATAAGTGTTTAT 57.226 33.333 0.00 0.00 34.04 1.40
205 206 9.269453 GTGTTTATAGGTATTTCACTATGGACC 57.731 37.037 0.00 0.00 32.51 4.46
206 207 8.994500 TGTTTATAGGTATTTCACTATGGACCA 58.006 33.333 0.00 0.00 32.51 4.02
207 208 9.269453 GTTTATAGGTATTTCACTATGGACCAC 57.731 37.037 0.00 0.00 32.51 4.16
208 209 8.555896 TTATAGGTATTTCACTATGGACCACA 57.444 34.615 0.00 0.00 32.51 4.17
209 210 5.975988 AGGTATTTCACTATGGACCACAT 57.024 39.130 0.00 0.00 43.68 3.21
210 211 8.736097 ATAGGTATTTCACTATGGACCACATA 57.264 34.615 0.00 0.00 41.03 2.29
211 212 6.827727 AGGTATTTCACTATGGACCACATAC 58.172 40.000 0.00 0.00 41.03 2.39
212 213 5.694910 GGTATTTCACTATGGACCACATACG 59.305 44.000 0.00 0.00 41.03 3.06
213 214 3.812156 TTCACTATGGACCACATACGG 57.188 47.619 0.00 0.00 41.03 4.02
214 215 1.411246 TCACTATGGACCACATACGGC 59.589 52.381 0.00 0.00 41.03 5.68
215 216 1.412710 CACTATGGACCACATACGGCT 59.587 52.381 0.00 0.00 41.03 5.52
216 217 1.412710 ACTATGGACCACATACGGCTG 59.587 52.381 0.00 0.00 41.03 4.85
217 218 1.412710 CTATGGACCACATACGGCTGT 59.587 52.381 2.42 2.42 41.03 4.40
218 219 1.491668 ATGGACCACATACGGCTGTA 58.508 50.000 8.08 8.08 38.26 2.74
219 220 1.491668 TGGACCACATACGGCTGTAT 58.508 50.000 12.62 12.62 42.03 2.29
220 221 2.668625 TGGACCACATACGGCTGTATA 58.331 47.619 17.79 0.00 39.28 1.47
221 222 3.236047 TGGACCACATACGGCTGTATAT 58.764 45.455 17.79 3.97 39.28 0.86
222 223 4.409187 TGGACCACATACGGCTGTATATA 58.591 43.478 17.79 0.00 39.28 0.86
223 224 4.461431 TGGACCACATACGGCTGTATATAG 59.539 45.833 17.79 11.25 39.28 1.31
224 225 4.703575 GGACCACATACGGCTGTATATAGA 59.296 45.833 17.79 0.00 39.28 1.98
225 226 5.360144 GGACCACATACGGCTGTATATAGAT 59.640 44.000 17.79 3.44 39.28 1.98
226 227 6.208988 ACCACATACGGCTGTATATAGATG 57.791 41.667 17.79 9.83 39.28 2.90
227 228 5.043903 CCACATACGGCTGTATATAGATGC 58.956 45.833 17.79 0.00 39.28 3.91
228 229 5.394115 CCACATACGGCTGTATATAGATGCA 60.394 44.000 17.79 0.00 39.28 3.96
229 230 6.276091 CACATACGGCTGTATATAGATGCAT 58.724 40.000 17.79 0.00 39.28 3.96
230 231 6.758416 CACATACGGCTGTATATAGATGCATT 59.242 38.462 17.79 0.00 39.28 3.56
231 232 7.278646 CACATACGGCTGTATATAGATGCATTT 59.721 37.037 17.79 0.00 39.28 2.32
232 233 7.824289 ACATACGGCTGTATATAGATGCATTTT 59.176 33.333 17.79 0.00 39.28 1.82
233 234 6.486253 ACGGCTGTATATAGATGCATTTTG 57.514 37.500 0.00 0.00 0.00 2.44
234 235 5.997746 ACGGCTGTATATAGATGCATTTTGT 59.002 36.000 0.00 0.00 0.00 2.83
235 236 6.073058 ACGGCTGTATATAGATGCATTTTGTG 60.073 38.462 0.00 0.00 0.00 3.33
236 237 6.073058 CGGCTGTATATAGATGCATTTTGTGT 60.073 38.462 0.00 0.00 0.00 3.72
237 238 7.080099 GGCTGTATATAGATGCATTTTGTGTG 58.920 38.462 0.00 0.00 0.00 3.82
238 239 7.255242 GGCTGTATATAGATGCATTTTGTGTGT 60.255 37.037 0.00 0.00 0.00 3.72
239 240 8.773645 GCTGTATATAGATGCATTTTGTGTGTA 58.226 33.333 0.00 0.00 0.00 2.90
245 246 6.822667 AGATGCATTTTGTGTGTAGATTCA 57.177 33.333 0.00 0.00 0.00 2.57
246 247 6.615088 AGATGCATTTTGTGTGTAGATTCAC 58.385 36.000 0.00 0.00 38.63 3.18
247 248 6.432162 AGATGCATTTTGTGTGTAGATTCACT 59.568 34.615 0.00 0.00 38.90 3.41
248 249 6.000891 TGCATTTTGTGTGTAGATTCACTC 57.999 37.500 0.00 0.00 38.90 3.51
249 250 5.530543 TGCATTTTGTGTGTAGATTCACTCA 59.469 36.000 0.00 0.00 39.13 3.41
250 251 6.207221 TGCATTTTGTGTGTAGATTCACTCAT 59.793 34.615 0.00 0.00 40.05 2.90
251 252 7.086376 GCATTTTGTGTGTAGATTCACTCATT 58.914 34.615 0.00 0.00 40.05 2.57
252 253 7.596248 GCATTTTGTGTGTAGATTCACTCATTT 59.404 33.333 0.00 0.00 40.05 2.32
253 254 9.467258 CATTTTGTGTGTAGATTCACTCATTTT 57.533 29.630 0.00 0.00 40.05 1.82
254 255 8.854979 TTTTGTGTGTAGATTCACTCATTTTG 57.145 30.769 0.00 0.00 40.05 2.44
255 256 6.000891 TGTGTGTAGATTCACTCATTTTGC 57.999 37.500 0.00 0.00 37.06 3.68
256 257 5.764686 TGTGTGTAGATTCACTCATTTTGCT 59.235 36.000 0.00 0.00 37.06 3.91
257 258 6.073058 TGTGTGTAGATTCACTCATTTTGCTC 60.073 38.462 0.00 0.00 37.06 4.26
258 259 5.412594 TGTGTAGATTCACTCATTTTGCTCC 59.587 40.000 0.00 0.00 38.90 4.70
259 260 4.631377 TGTAGATTCACTCATTTTGCTCCG 59.369 41.667 0.00 0.00 0.00 4.63
260 261 3.679389 AGATTCACTCATTTTGCTCCGT 58.321 40.909 0.00 0.00 0.00 4.69
261 262 4.832248 AGATTCACTCATTTTGCTCCGTA 58.168 39.130 0.00 0.00 0.00 4.02
262 263 5.431765 AGATTCACTCATTTTGCTCCGTAT 58.568 37.500 0.00 0.00 0.00 3.06
263 264 4.944962 TTCACTCATTTTGCTCCGTATG 57.055 40.909 0.00 0.00 0.00 2.39
264 265 3.937814 TCACTCATTTTGCTCCGTATGT 58.062 40.909 0.00 0.00 0.00 2.29
265 266 3.684305 TCACTCATTTTGCTCCGTATGTG 59.316 43.478 0.00 0.00 0.00 3.21
266 267 3.009723 ACTCATTTTGCTCCGTATGTGG 58.990 45.455 0.00 0.00 0.00 4.17
267 268 3.009723 CTCATTTTGCTCCGTATGTGGT 58.990 45.455 0.00 0.00 0.00 4.16
268 269 3.006940 TCATTTTGCTCCGTATGTGGTC 58.993 45.455 0.00 0.00 0.00 4.02
269 270 1.816074 TTTTGCTCCGTATGTGGTCC 58.184 50.000 0.00 0.00 0.00 4.46
270 271 0.687920 TTTGCTCCGTATGTGGTCCA 59.312 50.000 0.00 0.00 0.00 4.02
271 272 0.908910 TTGCTCCGTATGTGGTCCAT 59.091 50.000 0.00 0.00 37.58 3.41
272 273 1.783071 TGCTCCGTATGTGGTCCATA 58.217 50.000 0.00 0.00 34.86 2.74
273 274 1.686587 TGCTCCGTATGTGGTCCATAG 59.313 52.381 0.00 0.00 36.71 2.23
274 275 1.687123 GCTCCGTATGTGGTCCATAGT 59.313 52.381 0.00 0.00 36.71 2.12
275 276 2.545952 GCTCCGTATGTGGTCCATAGTG 60.546 54.545 0.00 0.00 36.71 2.74
276 277 2.956333 CTCCGTATGTGGTCCATAGTGA 59.044 50.000 0.00 0.00 36.71 3.41
277 278 3.367321 TCCGTATGTGGTCCATAGTGAA 58.633 45.455 0.00 0.00 36.71 3.18
278 279 3.770388 TCCGTATGTGGTCCATAGTGAAA 59.230 43.478 0.00 0.00 36.71 2.69
279 280 4.407621 TCCGTATGTGGTCCATAGTGAAAT 59.592 41.667 0.00 0.00 36.71 2.17
280 281 4.750098 CCGTATGTGGTCCATAGTGAAATC 59.250 45.833 0.00 0.00 36.71 2.17
281 282 5.453339 CCGTATGTGGTCCATAGTGAAATCT 60.453 44.000 0.00 0.00 36.71 2.40
282 283 5.692204 CGTATGTGGTCCATAGTGAAATCTC 59.308 44.000 0.00 0.00 36.71 2.75
283 284 5.965033 ATGTGGTCCATAGTGAAATCTCT 57.035 39.130 0.00 0.00 29.82 3.10
284 285 5.344743 TGTGGTCCATAGTGAAATCTCTC 57.655 43.478 0.00 0.00 0.00 3.20
285 286 4.162320 TGTGGTCCATAGTGAAATCTCTCC 59.838 45.833 0.00 0.00 0.00 3.71
286 287 4.162320 GTGGTCCATAGTGAAATCTCTCCA 59.838 45.833 0.00 0.00 0.00 3.86
287 288 4.782691 TGGTCCATAGTGAAATCTCTCCAA 59.217 41.667 0.00 0.00 0.00 3.53
288 289 5.250543 TGGTCCATAGTGAAATCTCTCCAAA 59.749 40.000 0.00 0.00 0.00 3.28
289 290 5.819901 GGTCCATAGTGAAATCTCTCCAAAG 59.180 44.000 0.00 0.00 0.00 2.77
290 291 6.352222 GGTCCATAGTGAAATCTCTCCAAAGA 60.352 42.308 0.00 0.00 0.00 2.52
291 292 6.536941 GTCCATAGTGAAATCTCTCCAAAGAC 59.463 42.308 0.00 0.00 0.00 3.01
292 293 6.441924 TCCATAGTGAAATCTCTCCAAAGACT 59.558 38.462 0.00 0.00 0.00 3.24
293 294 7.038017 TCCATAGTGAAATCTCTCCAAAGACTT 60.038 37.037 0.00 0.00 0.00 3.01
294 295 8.260818 CCATAGTGAAATCTCTCCAAAGACTTA 58.739 37.037 0.00 0.00 0.00 2.24
295 296 9.829507 CATAGTGAAATCTCTCCAAAGACTTAT 57.170 33.333 0.00 0.00 0.00 1.73
306 307 9.250624 CTCTCCAAAGACTTATATTTAGGAACG 57.749 37.037 0.00 0.00 0.00 3.95
307 308 8.202137 TCTCCAAAGACTTATATTTAGGAACGG 58.798 37.037 0.00 0.00 0.00 4.44
308 309 8.081517 TCCAAAGACTTATATTTAGGAACGGA 57.918 34.615 0.00 0.00 0.00 4.69
309 310 8.202137 TCCAAAGACTTATATTTAGGAACGGAG 58.798 37.037 0.00 0.00 0.00 4.63
310 311 7.441458 CCAAAGACTTATATTTAGGAACGGAGG 59.559 40.741 0.00 0.00 0.00 4.30
311 312 6.667558 AGACTTATATTTAGGAACGGAGGG 57.332 41.667 0.00 0.00 0.00 4.30
312 313 6.379579 AGACTTATATTTAGGAACGGAGGGA 58.620 40.000 0.00 0.00 0.00 4.20
313 314 6.494146 AGACTTATATTTAGGAACGGAGGGAG 59.506 42.308 0.00 0.00 0.00 4.30
314 315 6.141790 ACTTATATTTAGGAACGGAGGGAGT 58.858 40.000 0.00 0.00 0.00 3.85
315 316 7.300658 ACTTATATTTAGGAACGGAGGGAGTA 58.699 38.462 0.00 0.00 0.00 2.59
320 321 3.117552 AGGAACGGAGGGAGTAGAAAT 57.882 47.619 0.00 0.00 0.00 2.17
328 329 7.625828 ACGGAGGGAGTAGAAATTTAAAATG 57.374 36.000 0.00 0.00 0.00 2.32
371 372 4.432712 TCACATGATTGTCACCATCTACG 58.567 43.478 0.00 0.00 32.34 3.51
383 385 2.963782 ACCATCTACGGTCCAGGTTATC 59.036 50.000 0.00 0.00 32.11 1.75
421 426 6.658816 ACAATGTCAAGTATGCATAACCAGAA 59.341 34.615 8.28 0.00 0.00 3.02
422 427 7.340232 ACAATGTCAAGTATGCATAACCAGAAT 59.660 33.333 8.28 0.00 0.00 2.40
423 428 8.839343 CAATGTCAAGTATGCATAACCAGAATA 58.161 33.333 8.28 0.00 0.00 1.75
424 429 8.613060 ATGTCAAGTATGCATAACCAGAATAG 57.387 34.615 8.28 0.00 0.00 1.73
425 430 7.791029 TGTCAAGTATGCATAACCAGAATAGA 58.209 34.615 8.28 0.00 0.00 1.98
426 431 8.264347 TGTCAAGTATGCATAACCAGAATAGAA 58.736 33.333 8.28 0.00 0.00 2.10
427 432 8.768955 GTCAAGTATGCATAACCAGAATAGAAG 58.231 37.037 8.28 0.00 0.00 2.85
428 433 7.933577 TCAAGTATGCATAACCAGAATAGAAGG 59.066 37.037 8.28 0.00 0.00 3.46
429 434 6.773638 AGTATGCATAACCAGAATAGAAGGG 58.226 40.000 8.28 0.00 0.00 3.95
445 450 2.579410 AGGGTTGGCGAAGTGTTTAT 57.421 45.000 0.00 0.00 0.00 1.40
465 470 7.945664 TGTTTATGTTTGGTAACCTTGGAGTAT 59.054 33.333 0.00 0.00 33.15 2.12
474 479 5.046520 GGTAACCTTGGAGTATGTGAGAGTT 60.047 44.000 0.00 0.00 0.00 3.01
476 481 4.899502 ACCTTGGAGTATGTGAGAGTTTG 58.100 43.478 0.00 0.00 0.00 2.93
488 497 5.399858 TGTGAGAGTTTGATACTTCGCTAC 58.600 41.667 0.00 0.00 37.17 3.58
523 533 5.957910 TTTTCGTTGCATTAGTTTTGTGG 57.042 34.783 0.00 0.00 0.00 4.17
529 539 0.455972 CATTAGTTTTGTGGGGCGCG 60.456 55.000 0.00 0.00 0.00 6.86
541 551 1.081708 GGGCGCGTAACCAAGTTTG 60.082 57.895 8.43 0.00 0.00 2.93
543 553 1.281656 GCGCGTAACCAAGTTTGCT 59.718 52.632 8.43 0.00 0.00 3.91
544 554 0.996727 GCGCGTAACCAAGTTTGCTG 60.997 55.000 8.43 0.00 0.00 4.41
550 560 4.496840 GCGTAACCAAGTTTGCTGTAAAGT 60.497 41.667 0.00 0.00 33.35 2.66
551 561 5.575019 CGTAACCAAGTTTGCTGTAAAGTT 58.425 37.500 5.60 5.60 41.45 2.66
554 564 7.062488 CGTAACCAAGTTTGCTGTAAAGTTTTT 59.938 33.333 8.33 7.69 39.34 1.94
555 565 6.720012 ACCAAGTTTGCTGTAAAGTTTTTG 57.280 33.333 8.33 4.18 39.34 2.44
559 569 8.073167 CCAAGTTTGCTGTAAAGTTTTTGTTTT 58.927 29.630 8.33 0.00 39.34 2.43
560 570 8.890951 CAAGTTTGCTGTAAAGTTTTTGTTTTG 58.109 29.630 8.33 0.00 39.34 2.44
583 593 3.510388 TTGTATCAGAGCCTCTTCACG 57.490 47.619 0.00 0.00 0.00 4.35
590 600 1.141053 AGAGCCTCTTCACGGTTTTGT 59.859 47.619 0.00 0.00 0.00 2.83
592 602 2.479275 GAGCCTCTTCACGGTTTTGTAC 59.521 50.000 0.00 0.00 0.00 2.90
596 606 4.512571 GCCTCTTCACGGTTTTGTACTAAA 59.487 41.667 0.00 0.00 0.00 1.85
631 641 4.155310 CAAATGGTTCGTTTGTACTCCC 57.845 45.455 0.00 0.00 36.11 4.30
632 642 3.782656 AATGGTTCGTTTGTACTCCCT 57.217 42.857 0.00 0.00 0.00 4.20
633 643 2.825861 TGGTTCGTTTGTACTCCCTC 57.174 50.000 0.00 0.00 0.00 4.30
634 644 1.345415 TGGTTCGTTTGTACTCCCTCC 59.655 52.381 0.00 0.00 0.00 4.30
635 645 1.670967 GGTTCGTTTGTACTCCCTCCG 60.671 57.143 0.00 0.00 0.00 4.63
636 646 1.000171 GTTCGTTTGTACTCCCTCCGT 60.000 52.381 0.00 0.00 0.00 4.69
637 647 1.331214 TCGTTTGTACTCCCTCCGTT 58.669 50.000 0.00 0.00 0.00 4.44
638 648 1.688197 TCGTTTGTACTCCCTCCGTTT 59.312 47.619 0.00 0.00 0.00 3.60
639 649 2.064014 CGTTTGTACTCCCTCCGTTTC 58.936 52.381 0.00 0.00 0.00 2.78
640 650 2.288640 CGTTTGTACTCCCTCCGTTTCT 60.289 50.000 0.00 0.00 0.00 2.52
641 651 3.057315 CGTTTGTACTCCCTCCGTTTCTA 60.057 47.826 0.00 0.00 0.00 2.10
642 652 4.559300 CGTTTGTACTCCCTCCGTTTCTAA 60.559 45.833 0.00 0.00 0.00 2.10
643 653 5.299949 GTTTGTACTCCCTCCGTTTCTAAA 58.700 41.667 0.00 0.00 0.00 1.85
644 654 5.750352 TTGTACTCCCTCCGTTTCTAAAT 57.250 39.130 0.00 0.00 0.00 1.40
645 655 6.855763 TTGTACTCCCTCCGTTTCTAAATA 57.144 37.500 0.00 0.00 0.00 1.40
646 656 7.427989 TTGTACTCCCTCCGTTTCTAAATAT 57.572 36.000 0.00 0.00 0.00 1.28
647 657 8.537728 TTGTACTCCCTCCGTTTCTAAATATA 57.462 34.615 0.00 0.00 0.00 0.86
648 658 8.537728 TGTACTCCCTCCGTTTCTAAATATAA 57.462 34.615 0.00 0.00 0.00 0.98
649 659 8.636213 TGTACTCCCTCCGTTTCTAAATATAAG 58.364 37.037 0.00 0.00 0.00 1.73
650 660 7.672122 ACTCCCTCCGTTTCTAAATATAAGT 57.328 36.000 0.00 0.00 0.00 2.24
651 661 7.724287 ACTCCCTCCGTTTCTAAATATAAGTC 58.276 38.462 0.00 0.00 0.00 3.01
652 662 7.564292 ACTCCCTCCGTTTCTAAATATAAGTCT 59.436 37.037 0.00 0.00 0.00 3.24
653 663 7.723324 TCCCTCCGTTTCTAAATATAAGTCTG 58.277 38.462 0.00 0.00 0.00 3.51
654 664 7.343833 TCCCTCCGTTTCTAAATATAAGTCTGT 59.656 37.037 0.00 0.00 0.00 3.41
655 665 7.985752 CCCTCCGTTTCTAAATATAAGTCTGTT 59.014 37.037 0.00 0.00 0.00 3.16
656 666 9.379791 CCTCCGTTTCTAAATATAAGTCTGTTT 57.620 33.333 0.00 0.00 0.00 2.83
673 683 9.706691 AAGTCTGTTTAGAGATTTCAATACGAA 57.293 29.630 0.00 0.00 32.48 3.85
674 684 9.141400 AGTCTGTTTAGAGATTTCAATACGAAC 57.859 33.333 0.00 0.00 32.48 3.95
675 685 9.141400 GTCTGTTTAGAGATTTCAATACGAACT 57.859 33.333 0.00 0.00 32.48 3.01
678 688 9.917129 TGTTTAGAGATTTCAATACGAACTACA 57.083 29.630 0.00 0.00 31.73 2.74
685 695 9.477484 AGATTTCAATACGAACTACATACATCC 57.523 33.333 0.00 0.00 31.73 3.51
686 696 7.688478 TTTCAATACGAACTACATACATCCG 57.312 36.000 0.00 0.00 31.73 4.18
687 697 6.381481 TCAATACGAACTACATACATCCGT 57.619 37.500 0.00 0.00 0.00 4.69
688 698 7.495135 TCAATACGAACTACATACATCCGTA 57.505 36.000 0.00 0.00 35.86 4.02
697 707 6.688578 ACTACATACATCCGTATTAAGCTGG 58.311 40.000 0.00 0.00 36.11 4.85
707 717 9.653287 CATCCGTATTAAGCTGGATATTCTTAA 57.347 33.333 0.96 0.00 39.16 1.85
715 725 3.498777 GCTGGATATTCTTAAAGTCGCCC 59.501 47.826 0.00 0.00 0.00 6.13
820 832 8.594550 GGCTGGATTTGGATTTAGTATCTACTA 58.405 37.037 0.00 0.00 37.73 1.82
901 913 5.708948 TGGCAGTTGTTTTAGATGCATTAC 58.291 37.500 0.00 0.00 38.63 1.89
904 916 6.528072 GGCAGTTGTTTTAGATGCATTACTTC 59.472 38.462 0.00 0.00 38.63 3.01
905 917 7.308435 GCAGTTGTTTTAGATGCATTACTTCT 58.692 34.615 0.00 0.00 36.88 2.85
906 918 8.450964 GCAGTTGTTTTAGATGCATTACTTCTA 58.549 33.333 0.00 0.00 36.88 2.10
907 919 9.760660 CAGTTGTTTTAGATGCATTACTTCTAC 57.239 33.333 0.00 0.00 35.40 2.59
909 921 8.947115 GTTGTTTTAGATGCATTACTTCTACCT 58.053 33.333 0.00 0.00 35.40 3.08
912 924 9.774742 GTTTTAGATGCATTACTTCTACCTTTG 57.225 33.333 0.00 0.00 35.40 2.77
913 925 7.553881 TTAGATGCATTACTTCTACCTTTGC 57.446 36.000 0.00 0.00 35.40 3.68
914 926 5.500234 AGATGCATTACTTCTACCTTTGCA 58.500 37.500 0.00 0.00 42.15 4.08
917 929 6.398234 TGCATTACTTCTACCTTTGCAAAA 57.602 33.333 13.84 0.00 35.85 2.44
918 930 6.991938 TGCATTACTTCTACCTTTGCAAAAT 58.008 32.000 13.84 7.07 35.85 1.82
919 931 7.090173 TGCATTACTTCTACCTTTGCAAAATC 58.910 34.615 13.84 0.00 35.85 2.17
920 932 7.039784 TGCATTACTTCTACCTTTGCAAAATCT 60.040 33.333 13.84 0.94 35.85 2.40
921 933 7.274250 GCATTACTTCTACCTTTGCAAAATCTG 59.726 37.037 13.84 1.09 0.00 2.90
922 934 7.817418 TTACTTCTACCTTTGCAAAATCTGT 57.183 32.000 13.84 10.30 0.00 3.41
923 935 8.911918 TTACTTCTACCTTTGCAAAATCTGTA 57.088 30.769 13.84 10.84 0.00 2.74
924 936 9.515226 TTACTTCTACCTTTGCAAAATCTGTAT 57.485 29.630 13.84 0.00 0.00 2.29
925 937 8.045176 ACTTCTACCTTTGCAAAATCTGTATC 57.955 34.615 13.84 0.00 0.00 2.24
926 938 7.665559 ACTTCTACCTTTGCAAAATCTGTATCA 59.334 33.333 13.84 0.93 0.00 2.15
927 939 8.579850 TTCTACCTTTGCAAAATCTGTATCAT 57.420 30.769 13.84 0.00 0.00 2.45
928 940 8.213518 TCTACCTTTGCAAAATCTGTATCATC 57.786 34.615 13.84 0.00 0.00 2.92
929 941 8.049117 TCTACCTTTGCAAAATCTGTATCATCT 58.951 33.333 13.84 0.00 0.00 2.90
930 942 9.330063 CTACCTTTGCAAAATCTGTATCATCTA 57.670 33.333 13.84 0.00 0.00 1.98
931 943 8.218338 ACCTTTGCAAAATCTGTATCATCTAG 57.782 34.615 13.84 0.00 0.00 2.43
932 944 7.137426 CCTTTGCAAAATCTGTATCATCTAGC 58.863 38.462 13.84 0.00 0.00 3.42
933 945 7.201758 CCTTTGCAAAATCTGTATCATCTAGCA 60.202 37.037 13.84 0.00 0.00 3.49
934 946 7.812690 TTGCAAAATCTGTATCATCTAGCAT 57.187 32.000 0.00 0.00 0.00 3.79
935 947 7.198306 TGCAAAATCTGTATCATCTAGCATG 57.802 36.000 0.00 0.00 0.00 4.06
936 948 6.084925 GCAAAATCTGTATCATCTAGCATGC 58.915 40.000 10.51 10.51 0.00 4.06
937 949 6.072618 GCAAAATCTGTATCATCTAGCATGCT 60.073 38.462 25.99 25.99 0.00 3.79
938 950 7.298854 CAAAATCTGTATCATCTAGCATGCTG 58.701 38.462 30.42 19.01 0.00 4.41
939 951 5.741962 ATCTGTATCATCTAGCATGCTGT 57.258 39.130 30.42 13.06 0.00 4.40
940 952 5.541953 TCTGTATCATCTAGCATGCTGTT 57.458 39.130 30.42 11.58 0.00 3.16
941 953 6.655078 TCTGTATCATCTAGCATGCTGTTA 57.345 37.500 30.42 15.12 0.00 2.41
942 954 7.054491 TCTGTATCATCTAGCATGCTGTTAA 57.946 36.000 30.42 9.24 0.00 2.01
943 955 7.500141 TCTGTATCATCTAGCATGCTGTTAAA 58.500 34.615 30.42 12.93 0.00 1.52
944 956 7.986889 TCTGTATCATCTAGCATGCTGTTAAAA 59.013 33.333 30.42 8.02 0.00 1.52
945 957 8.681486 TGTATCATCTAGCATGCTGTTAAAAT 57.319 30.769 30.42 17.13 0.00 1.82
946 958 8.777413 TGTATCATCTAGCATGCTGTTAAAATC 58.223 33.333 30.42 14.49 0.00 2.17
947 959 6.624352 TCATCTAGCATGCTGTTAAAATCC 57.376 37.500 30.42 0.00 0.00 3.01
948 960 5.237127 TCATCTAGCATGCTGTTAAAATCCG 59.763 40.000 30.42 7.29 0.00 4.18
949 961 4.513442 TCTAGCATGCTGTTAAAATCCGT 58.487 39.130 30.42 1.08 0.00 4.69
950 962 3.492421 AGCATGCTGTTAAAATCCGTG 57.508 42.857 21.98 0.00 0.00 4.94
951 963 2.164219 AGCATGCTGTTAAAATCCGTGG 59.836 45.455 21.98 0.00 0.00 4.94
952 964 2.094752 GCATGCTGTTAAAATCCGTGGT 60.095 45.455 11.37 0.00 0.00 4.16
953 965 3.500982 CATGCTGTTAAAATCCGTGGTG 58.499 45.455 0.00 0.00 0.00 4.17
954 966 2.577700 TGCTGTTAAAATCCGTGGTGT 58.422 42.857 0.00 0.00 0.00 4.16
955 967 3.741249 TGCTGTTAAAATCCGTGGTGTA 58.259 40.909 0.00 0.00 0.00 2.90
956 968 4.328536 TGCTGTTAAAATCCGTGGTGTAT 58.671 39.130 0.00 0.00 0.00 2.29
957 969 4.155099 TGCTGTTAAAATCCGTGGTGTATG 59.845 41.667 0.00 0.00 0.00 2.39
958 970 4.155280 GCTGTTAAAATCCGTGGTGTATGT 59.845 41.667 0.00 0.00 0.00 2.29
986 998 9.442047 TTGATTTGTTTCTTTGTTACATTTGGT 57.558 25.926 0.00 0.00 0.00 3.67
988 1000 9.701355 GATTTGTTTCTTTGTTACATTTGGTTG 57.299 29.630 0.00 0.00 0.00 3.77
989 1001 6.654793 TGTTTCTTTGTTACATTTGGTTGC 57.345 33.333 0.00 0.00 0.00 4.17
990 1002 6.166279 TGTTTCTTTGTTACATTTGGTTGCA 58.834 32.000 0.00 0.00 0.00 4.08
992 1004 6.654793 TTCTTTGTTACATTTGGTTGCAAC 57.345 33.333 21.59 21.59 0.00 4.17
993 1005 5.724328 TCTTTGTTACATTTGGTTGCAACA 58.276 33.333 29.55 13.95 32.41 3.33
994 1006 6.344500 TCTTTGTTACATTTGGTTGCAACAT 58.656 32.000 29.55 13.08 33.92 2.71
995 1007 6.478344 TCTTTGTTACATTTGGTTGCAACATC 59.522 34.615 29.55 14.69 33.92 3.06
1018 1030 6.845302 TCTAGCATGCTGTTAAAACATCTTG 58.155 36.000 30.42 0.13 38.41 3.02
1019 1031 5.710513 AGCATGCTGTTAAAACATCTTGA 57.289 34.783 21.98 0.00 38.41 3.02
1020 1032 6.276832 AGCATGCTGTTAAAACATCTTGAT 57.723 33.333 21.98 6.99 38.41 2.57
1021 1033 6.694447 AGCATGCTGTTAAAACATCTTGATT 58.306 32.000 21.98 0.00 38.41 2.57
1022 1034 7.156673 AGCATGCTGTTAAAACATCTTGATTT 58.843 30.769 21.98 0.00 38.41 2.17
1023 1035 8.306038 AGCATGCTGTTAAAACATCTTGATTTA 58.694 29.630 21.98 0.00 38.41 1.40
1024 1036 9.090692 GCATGCTGTTAAAACATCTTGATTTAT 57.909 29.630 11.37 0.00 38.41 1.40
1040 1071 7.814587 TCTTGATTTATATATCAGCACACTCCG 59.185 37.037 6.07 0.00 36.03 4.63
1052 1083 1.676006 CACACTCCGCCAGAAAAACTT 59.324 47.619 0.00 0.00 0.00 2.66
1061 1092 2.358898 GCCAGAAAAACTTGTCTCTGCA 59.641 45.455 0.00 0.00 35.09 4.41
1063 1094 3.629398 CCAGAAAAACTTGTCTCTGCAGT 59.371 43.478 14.67 0.00 35.09 4.40
1064 1095 4.497006 CCAGAAAAACTTGTCTCTGCAGTG 60.497 45.833 14.67 11.96 35.09 3.66
1069 1100 3.266510 ACTTGTCTCTGCAGTGTTCAA 57.733 42.857 14.67 17.70 0.00 2.69
1090 1121 6.480763 TCAATTTTACCTGAATGCTACTCCA 58.519 36.000 0.00 0.00 0.00 3.86
1106 1137 6.602803 TGCTACTCCATATTCTTCAATTGCAA 59.397 34.615 0.00 0.00 0.00 4.08
1141 1172 2.029073 CCGCGCCGGTGAAGATAT 59.971 61.111 21.76 0.00 42.73 1.63
1181 1212 8.465201 GCAATTCTAATGTTTCAATTCCTCTCT 58.535 33.333 0.00 0.00 0.00 3.10
1248 1279 2.498248 GCTCCGAGATGCTGCTCA 59.502 61.111 0.00 0.00 34.56 4.26
1270 1301 1.531423 CTGCCTGTTTGTCTCATGCT 58.469 50.000 0.00 0.00 0.00 3.79
1537 1586 3.355378 TGTAGCATTCAACTTCCCATGG 58.645 45.455 4.14 4.14 0.00 3.66
1828 1881 6.324819 CCACAAACTGCGAATGATAAAGAAT 58.675 36.000 0.00 0.00 0.00 2.40
1885 1942 4.453136 GGTGACCGTATAGAGATCTCACTC 59.547 50.000 24.39 9.15 37.19 3.51
2012 2069 4.259690 GCATATTTTCACGTCACGAGGTAC 60.260 45.833 2.91 0.00 0.00 3.34
2014 2071 2.410785 TTTCACGTCACGAGGTACTG 57.589 50.000 2.91 0.00 41.55 2.74
2015 2072 1.311859 TTCACGTCACGAGGTACTGT 58.688 50.000 2.91 0.00 41.55 3.55
2016 2073 2.168326 TCACGTCACGAGGTACTGTA 57.832 50.000 2.91 0.00 41.55 2.74
2100 2196 9.688091 TGGTACCTTGAAATGTTAATTAGCATA 57.312 29.630 14.36 0.00 0.00 3.14
2131 2227 0.107214 TGCAGGTAGCCAATACAGCC 60.107 55.000 0.00 0.00 44.83 4.85
2168 2264 1.528129 CAAGTTCCTCCACCTGAAGC 58.472 55.000 0.00 0.00 0.00 3.86
2306 2412 7.641411 CCTACGAATATTTTTGAATGCACTCAG 59.359 37.037 0.00 0.00 0.00 3.35
2333 2439 7.637229 CATCCTGCAAACATAAATAGTCTCTG 58.363 38.462 0.00 0.00 0.00 3.35
2337 2443 5.123820 TGCAAACATAAATAGTCTCTGTGGC 59.876 40.000 0.00 0.00 0.00 5.01
2343 2449 3.618690 AATAGTCTCTGTGGCTGAACC 57.381 47.619 0.00 0.00 39.84 3.62
2461 2572 1.048601 GGCAGATTCCAGGATACCGA 58.951 55.000 0.00 0.00 37.17 4.69
2473 2584 2.501723 AGGATACCGACATGACAAGCTT 59.498 45.455 0.00 0.00 37.17 3.74
2493 2604 4.732355 GCTTCGGAGTGTGAAGATCTCTAC 60.732 50.000 6.89 0.00 44.42 2.59
2499 2610 5.585445 GGAGTGTGAAGATCTCTACGTTCTA 59.415 44.000 0.00 0.00 0.00 2.10
2510 2621 6.497785 TCTCTACGTTCTACTCTTCAAAGG 57.502 41.667 0.00 0.00 0.00 3.11
2512 2623 3.679824 ACGTTCTACTCTTCAAAGGGG 57.320 47.619 0.00 0.00 0.00 4.79
2562 2720 0.878523 TTTCAGGTGTTCTGGCGACG 60.879 55.000 0.00 0.00 43.53 5.12
2620 2778 0.378610 GCCGATAAAGCAGTCTTGGC 59.621 55.000 0.00 0.00 32.72 4.52
2674 2832 2.002586 CACGGTCAAGCTAGATGTTGG 58.997 52.381 0.00 0.00 0.00 3.77
2783 2944 6.015940 AGGAAAGACAACATTCAGATCCAAAC 60.016 38.462 0.00 0.00 0.00 2.93
2784 2945 6.239008 GGAAAGACAACATTCAGATCCAAACA 60.239 38.462 0.00 0.00 0.00 2.83
2850 3011 5.882557 CAGCAGTGGGTATAGATCTTGTTTT 59.117 40.000 0.00 0.00 0.00 2.43
2894 3055 5.570320 AGTGGCATGTTGTTTCCTTATAGT 58.430 37.500 0.00 0.00 0.00 2.12
2952 3113 2.303311 TGTACATCGACCACCCATTTCA 59.697 45.455 0.00 0.00 0.00 2.69
2955 3116 2.224769 ACATCGACCACCCATTTCAAGT 60.225 45.455 0.00 0.00 0.00 3.16
2999 3160 1.303091 GCGGGTGTTTGATAGCGGTT 61.303 55.000 0.00 0.00 0.00 4.44
3023 3185 5.766222 ACTTGCTCATTGTTTCATCTTGAC 58.234 37.500 0.00 0.00 0.00 3.18
3053 3215 8.867935 CAAAATCTATATCATCTCGATGTGGAC 58.132 37.037 6.78 0.00 35.93 4.02
3081 3243 2.931969 TGCATCTAATTGCTCGTGTGAG 59.068 45.455 0.00 0.00 43.18 3.51
3085 3247 3.838120 TCTAATTGCTCGTGTGAGACAG 58.162 45.455 0.00 0.00 45.57 3.51
3104 3266 2.435234 GACACACCGGCGCCATTA 60.435 61.111 28.98 0.00 0.00 1.90
3235 3399 4.447138 TGAATATACGGGCAATTTCCCT 57.553 40.909 11.64 1.39 44.30 4.20
3236 3400 4.141287 TGAATATACGGGCAATTTCCCTG 58.859 43.478 11.64 7.43 44.30 4.45
3379 3544 6.834168 AATTTCGGGTTCTTATTGTGACAT 57.166 33.333 0.00 0.00 0.00 3.06
3380 3545 7.931578 AATTTCGGGTTCTTATTGTGACATA 57.068 32.000 0.00 0.00 0.00 2.29
3381 3546 6.730960 TTTCGGGTTCTTATTGTGACATAC 57.269 37.500 0.00 0.00 0.00 2.39
3382 3547 5.670792 TCGGGTTCTTATTGTGACATACT 57.329 39.130 0.00 0.00 0.00 2.12
3396 3561 3.055385 TGACATACTTACAAGGCCTCCAC 60.055 47.826 5.23 0.00 0.00 4.02
3414 3582 2.362375 GCAGGCATTTTCGGGGGA 60.362 61.111 0.00 0.00 0.00 4.81
3442 3616 3.303881 TTCATCTGCCGATTCTATCCG 57.696 47.619 0.00 0.00 0.00 4.18
3447 3621 2.812591 TCTGCCGATTCTATCCGTAGTC 59.187 50.000 0.00 0.00 0.00 2.59
3450 3624 2.668834 GCCGATTCTATCCGTAGTCTGC 60.669 54.545 0.00 0.00 0.00 4.26
3471 3645 3.058708 GCCATTTTTGCTCCAGAAAAAGC 60.059 43.478 0.00 0.00 36.12 3.51
3474 3648 3.457610 TTTTGCTCCAGAAAAAGCCAG 57.542 42.857 0.00 0.00 37.73 4.85
3475 3649 2.071778 TTGCTCCAGAAAAAGCCAGT 57.928 45.000 0.00 0.00 37.73 4.00
3476 3650 1.321474 TGCTCCAGAAAAAGCCAGTG 58.679 50.000 0.00 0.00 37.73 3.66
3479 3659 2.030451 GCTCCAGAAAAAGCCAGTGAAG 60.030 50.000 0.00 0.00 32.22 3.02
3493 3673 3.353836 GAAGCAAACCCGCGCTCA 61.354 61.111 5.56 0.00 37.54 4.26
3496 3676 2.476534 AAGCAAACCCGCGCTCAATG 62.477 55.000 5.56 0.00 37.54 2.82
3499 3679 0.179200 CAAACCCGCGCTCAATGTAC 60.179 55.000 5.56 0.00 0.00 2.90
3500 3680 1.303091 AAACCCGCGCTCAATGTACC 61.303 55.000 5.56 0.00 0.00 3.34
3501 3681 3.261951 CCCGCGCTCAATGTACCG 61.262 66.667 5.56 0.00 0.00 4.02
3502 3682 3.925238 CCGCGCTCAATGTACCGC 61.925 66.667 5.56 2.36 42.71 5.68
3511 3696 2.949909 AATGTACCGCGGGAGTGCA 61.950 57.895 31.76 18.86 39.52 4.57
3533 3718 1.302832 CTGCTTTTCCTCCGGCAGT 60.303 57.895 0.00 0.00 44.69 4.40
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
21 22 5.753438 TCAAGTTGTCAGCTACAGTTACTTG 59.247 40.000 19.87 19.87 46.51 3.16
27 28 3.819564 TGTCAAGTTGTCAGCTACAGT 57.180 42.857 2.11 0.00 39.87 3.55
31 32 5.151297 TCATGATGTCAAGTTGTCAGCTA 57.849 39.130 17.04 6.48 0.00 3.32
34 35 5.163683 GGGATTCATGATGTCAAGTTGTCAG 60.164 44.000 8.71 0.00 0.00 3.51
54 55 3.808189 AGATATGGAAGGGAATCGGGAT 58.192 45.455 0.00 0.00 0.00 3.85
59 60 5.513962 GGTCCTCAAGATATGGAAGGGAATC 60.514 48.000 0.00 0.00 0.00 2.52
60 61 4.352298 GGTCCTCAAGATATGGAAGGGAAT 59.648 45.833 0.00 0.00 0.00 3.01
61 62 3.716872 GGTCCTCAAGATATGGAAGGGAA 59.283 47.826 0.00 0.00 0.00 3.97
62 63 3.051032 AGGTCCTCAAGATATGGAAGGGA 60.051 47.826 0.00 0.00 0.00 4.20
63 64 3.321950 AGGTCCTCAAGATATGGAAGGG 58.678 50.000 0.00 0.00 0.00 3.95
64 65 4.164988 ACAAGGTCCTCAAGATATGGAAGG 59.835 45.833 0.00 0.00 0.00 3.46
65 66 5.130145 AGACAAGGTCCTCAAGATATGGAAG 59.870 44.000 0.00 0.00 32.18 3.46
67 68 4.624913 AGACAAGGTCCTCAAGATATGGA 58.375 43.478 0.00 0.00 32.18 3.41
68 69 6.485830 TTAGACAAGGTCCTCAAGATATGG 57.514 41.667 0.00 0.00 32.18 2.74
69 70 8.970859 ATTTTAGACAAGGTCCTCAAGATATG 57.029 34.615 0.00 0.00 32.18 1.78
70 71 8.772250 TGATTTTAGACAAGGTCCTCAAGATAT 58.228 33.333 0.00 0.00 32.18 1.63
71 72 8.041323 GTGATTTTAGACAAGGTCCTCAAGATA 58.959 37.037 0.00 0.00 32.18 1.98
72 73 6.881602 GTGATTTTAGACAAGGTCCTCAAGAT 59.118 38.462 0.00 0.00 32.18 2.40
73 74 6.183361 TGTGATTTTAGACAAGGTCCTCAAGA 60.183 38.462 0.00 0.00 32.18 3.02
118 119 3.053395 ACCTGTAGCCAAATGGATCACAT 60.053 43.478 2.98 0.00 43.07 3.21
131 132 2.290323 ACACATGGAAGAACCTGTAGCC 60.290 50.000 0.00 0.00 39.86 3.93
134 135 7.364408 GGAGTAATACACATGGAAGAACCTGTA 60.364 40.741 0.00 0.00 39.86 2.74
146 147 4.369182 GAACGGAGGGAGTAATACACATG 58.631 47.826 0.00 0.00 0.00 3.21
156 157 6.041751 CACTTATATTTAGGAACGGAGGGAGT 59.958 42.308 0.00 0.00 0.00 3.85
157 158 6.041751 ACACTTATATTTAGGAACGGAGGGAG 59.958 42.308 0.00 0.00 0.00 4.30
158 159 5.901276 ACACTTATATTTAGGAACGGAGGGA 59.099 40.000 0.00 0.00 0.00 4.20
159 160 6.170846 ACACTTATATTTAGGAACGGAGGG 57.829 41.667 0.00 0.00 0.00 4.30
160 161 9.774413 ATAAACACTTATATTTAGGAACGGAGG 57.226 33.333 0.00 0.00 0.00 4.30
179 180 9.269453 GGTCCATAGTGAAATACCTATAAACAC 57.731 37.037 0.00 0.00 0.00 3.32
180 181 8.994500 TGGTCCATAGTGAAATACCTATAAACA 58.006 33.333 0.00 0.00 0.00 2.83
181 182 9.269453 GTGGTCCATAGTGAAATACCTATAAAC 57.731 37.037 0.00 0.00 0.00 2.01
182 183 8.994500 TGTGGTCCATAGTGAAATACCTATAAA 58.006 33.333 0.00 0.00 0.00 1.40
183 184 8.555896 TGTGGTCCATAGTGAAATACCTATAA 57.444 34.615 0.00 0.00 0.00 0.98
184 185 8.736097 ATGTGGTCCATAGTGAAATACCTATA 57.264 34.615 0.00 0.00 29.82 1.31
185 186 7.633018 ATGTGGTCCATAGTGAAATACCTAT 57.367 36.000 0.00 0.00 29.82 2.57
186 187 7.255695 CGTATGTGGTCCATAGTGAAATACCTA 60.256 40.741 0.00 0.00 36.71 3.08
187 188 5.975988 ATGTGGTCCATAGTGAAATACCT 57.024 39.130 0.00 0.00 29.82 3.08
188 189 5.694910 CGTATGTGGTCCATAGTGAAATACC 59.305 44.000 0.00 0.00 36.71 2.73
189 190 5.694910 CCGTATGTGGTCCATAGTGAAATAC 59.305 44.000 0.00 0.00 36.71 1.89
190 191 5.740803 GCCGTATGTGGTCCATAGTGAAATA 60.741 44.000 0.00 0.00 36.71 1.40
191 192 4.703897 CCGTATGTGGTCCATAGTGAAAT 58.296 43.478 0.00 0.00 36.71 2.17
192 193 3.680475 GCCGTATGTGGTCCATAGTGAAA 60.680 47.826 0.00 0.00 36.71 2.69
193 194 2.159014 GCCGTATGTGGTCCATAGTGAA 60.159 50.000 0.00 0.00 36.71 3.18
194 195 1.411246 GCCGTATGTGGTCCATAGTGA 59.589 52.381 0.00 0.00 36.71 3.41
195 196 1.412710 AGCCGTATGTGGTCCATAGTG 59.587 52.381 0.00 0.00 36.71 2.74
196 197 1.412710 CAGCCGTATGTGGTCCATAGT 59.587 52.381 0.00 0.00 36.71 2.12
197 198 1.412710 ACAGCCGTATGTGGTCCATAG 59.587 52.381 0.00 0.00 36.71 2.23
198 199 1.491668 ACAGCCGTATGTGGTCCATA 58.508 50.000 0.00 0.00 34.86 2.74
199 200 1.491668 TACAGCCGTATGTGGTCCAT 58.508 50.000 0.00 0.00 37.58 3.41
200 201 1.491668 ATACAGCCGTATGTGGTCCA 58.508 50.000 0.00 0.00 36.94 4.02
201 202 3.955650 ATATACAGCCGTATGTGGTCC 57.044 47.619 2.71 0.00 38.79 4.46
202 203 5.892160 TCTATATACAGCCGTATGTGGTC 57.108 43.478 2.71 0.00 38.79 4.02
203 204 5.394224 GCATCTATATACAGCCGTATGTGGT 60.394 44.000 2.71 0.00 38.79 4.16
204 205 5.043903 GCATCTATATACAGCCGTATGTGG 58.956 45.833 2.71 0.00 38.79 4.17
205 206 5.650543 TGCATCTATATACAGCCGTATGTG 58.349 41.667 2.71 0.00 38.79 3.21
206 207 5.914898 TGCATCTATATACAGCCGTATGT 57.085 39.130 2.71 0.00 38.79 2.29
207 208 7.776933 AAATGCATCTATATACAGCCGTATG 57.223 36.000 0.00 0.00 38.79 2.39
208 209 7.824289 ACAAAATGCATCTATATACAGCCGTAT 59.176 33.333 0.00 0.00 41.34 3.06
209 210 7.117667 CACAAAATGCATCTATATACAGCCGTA 59.882 37.037 0.00 0.00 0.00 4.02
210 211 5.997746 ACAAAATGCATCTATATACAGCCGT 59.002 36.000 0.00 0.00 0.00 5.68
211 212 6.073058 ACACAAAATGCATCTATATACAGCCG 60.073 38.462 0.00 0.00 0.00 5.52
212 213 7.080099 CACACAAAATGCATCTATATACAGCC 58.920 38.462 0.00 0.00 0.00 4.85
213 214 7.642669 ACACACAAAATGCATCTATATACAGC 58.357 34.615 0.00 0.00 0.00 4.40
219 220 9.612066 TGAATCTACACACAAAATGCATCTATA 57.388 29.630 0.00 0.00 0.00 1.31
220 221 8.400947 GTGAATCTACACACAAAATGCATCTAT 58.599 33.333 0.00 0.00 40.11 1.98
221 222 7.607607 AGTGAATCTACACACAAAATGCATCTA 59.392 33.333 0.00 0.00 42.45 1.98
222 223 6.432162 AGTGAATCTACACACAAAATGCATCT 59.568 34.615 0.00 0.00 42.45 2.90
223 224 6.615088 AGTGAATCTACACACAAAATGCATC 58.385 36.000 0.00 0.00 42.45 3.91
224 225 6.207221 TGAGTGAATCTACACACAAAATGCAT 59.793 34.615 0.00 0.00 42.45 3.96
225 226 5.530543 TGAGTGAATCTACACACAAAATGCA 59.469 36.000 0.00 0.00 42.45 3.96
226 227 6.000891 TGAGTGAATCTACACACAAAATGC 57.999 37.500 0.00 0.00 42.45 3.56
227 228 9.467258 AAAATGAGTGAATCTACACACAAAATG 57.533 29.630 0.00 0.00 42.37 2.32
228 229 9.467258 CAAAATGAGTGAATCTACACACAAAAT 57.533 29.630 0.00 0.00 42.37 1.82
229 230 7.434897 GCAAAATGAGTGAATCTACACACAAAA 59.565 33.333 0.00 0.00 42.37 2.44
230 231 6.917477 GCAAAATGAGTGAATCTACACACAAA 59.083 34.615 0.00 0.00 42.37 2.83
231 232 6.262944 AGCAAAATGAGTGAATCTACACACAA 59.737 34.615 0.00 0.00 42.37 3.33
232 233 5.764686 AGCAAAATGAGTGAATCTACACACA 59.235 36.000 0.00 0.00 42.98 3.72
233 234 6.246420 AGCAAAATGAGTGAATCTACACAC 57.754 37.500 0.00 0.00 42.45 3.82
234 235 5.412594 GGAGCAAAATGAGTGAATCTACACA 59.587 40.000 0.00 0.00 42.45 3.72
235 236 5.446473 CGGAGCAAAATGAGTGAATCTACAC 60.446 44.000 0.00 0.00 40.60 2.90
236 237 4.631377 CGGAGCAAAATGAGTGAATCTACA 59.369 41.667 0.00 0.00 0.00 2.74
237 238 4.631813 ACGGAGCAAAATGAGTGAATCTAC 59.368 41.667 0.00 0.00 0.00 2.59
238 239 4.832248 ACGGAGCAAAATGAGTGAATCTA 58.168 39.130 0.00 0.00 0.00 1.98
239 240 3.679389 ACGGAGCAAAATGAGTGAATCT 58.321 40.909 0.00 0.00 0.00 2.40
240 241 5.065218 ACATACGGAGCAAAATGAGTGAATC 59.935 40.000 0.00 0.00 0.00 2.52
241 242 4.943705 ACATACGGAGCAAAATGAGTGAAT 59.056 37.500 0.00 0.00 0.00 2.57
242 243 4.154015 CACATACGGAGCAAAATGAGTGAA 59.846 41.667 0.00 0.00 0.00 3.18
243 244 3.684305 CACATACGGAGCAAAATGAGTGA 59.316 43.478 0.00 0.00 0.00 3.41
244 245 3.181507 CCACATACGGAGCAAAATGAGTG 60.182 47.826 0.00 0.00 0.00 3.51
245 246 3.009723 CCACATACGGAGCAAAATGAGT 58.990 45.455 0.00 0.00 0.00 3.41
246 247 3.009723 ACCACATACGGAGCAAAATGAG 58.990 45.455 0.00 0.00 0.00 2.90
247 248 3.006940 GACCACATACGGAGCAAAATGA 58.993 45.455 0.00 0.00 0.00 2.57
248 249 2.097466 GGACCACATACGGAGCAAAATG 59.903 50.000 0.00 0.00 0.00 2.32
249 250 2.290641 TGGACCACATACGGAGCAAAAT 60.291 45.455 0.00 0.00 0.00 1.82
250 251 1.072489 TGGACCACATACGGAGCAAAA 59.928 47.619 0.00 0.00 0.00 2.44
251 252 0.687920 TGGACCACATACGGAGCAAA 59.312 50.000 0.00 0.00 0.00 3.68
252 253 0.908910 ATGGACCACATACGGAGCAA 59.091 50.000 0.00 0.00 38.26 3.91
253 254 1.686587 CTATGGACCACATACGGAGCA 59.313 52.381 0.00 0.00 41.03 4.26
254 255 1.687123 ACTATGGACCACATACGGAGC 59.313 52.381 0.00 0.00 41.03 4.70
255 256 2.956333 TCACTATGGACCACATACGGAG 59.044 50.000 0.00 0.00 41.03 4.63
256 257 3.021177 TCACTATGGACCACATACGGA 57.979 47.619 0.00 0.00 41.03 4.69
257 258 3.812156 TTCACTATGGACCACATACGG 57.188 47.619 0.00 0.00 41.03 4.02
258 259 5.601662 AGATTTCACTATGGACCACATACG 58.398 41.667 0.00 0.00 41.03 3.06
259 260 6.821388 AGAGATTTCACTATGGACCACATAC 58.179 40.000 0.00 0.00 41.03 2.39
260 261 6.042093 GGAGAGATTTCACTATGGACCACATA 59.958 42.308 0.00 0.00 41.03 2.29
261 262 5.163258 GGAGAGATTTCACTATGGACCACAT 60.163 44.000 0.00 0.00 43.68 3.21
262 263 4.162320 GGAGAGATTTCACTATGGACCACA 59.838 45.833 0.00 0.00 0.00 4.17
263 264 4.162320 TGGAGAGATTTCACTATGGACCAC 59.838 45.833 0.00 0.00 0.00 4.16
264 265 4.361783 TGGAGAGATTTCACTATGGACCA 58.638 43.478 0.00 0.00 0.00 4.02
265 266 5.359194 TTGGAGAGATTTCACTATGGACC 57.641 43.478 0.00 0.00 0.00 4.46
266 267 6.536941 GTCTTTGGAGAGATTTCACTATGGAC 59.463 42.308 0.00 0.00 31.07 4.02
267 268 6.441924 AGTCTTTGGAGAGATTTCACTATGGA 59.558 38.462 0.00 0.00 31.07 3.41
268 269 6.648192 AGTCTTTGGAGAGATTTCACTATGG 58.352 40.000 0.00 0.00 31.07 2.74
269 270 9.829507 ATAAGTCTTTGGAGAGATTTCACTATG 57.170 33.333 0.00 0.00 31.07 2.23
280 281 9.250624 CGTTCCTAAATATAAGTCTTTGGAGAG 57.749 37.037 0.00 0.00 31.07 3.20
281 282 8.202137 CCGTTCCTAAATATAAGTCTTTGGAGA 58.798 37.037 0.00 0.00 0.00 3.71
282 283 8.202137 TCCGTTCCTAAATATAAGTCTTTGGAG 58.798 37.037 0.00 0.00 0.00 3.86
283 284 8.081517 TCCGTTCCTAAATATAAGTCTTTGGA 57.918 34.615 0.00 0.00 0.00 3.53
284 285 7.441458 CCTCCGTTCCTAAATATAAGTCTTTGG 59.559 40.741 0.00 0.00 0.00 3.28
285 286 7.441458 CCCTCCGTTCCTAAATATAAGTCTTTG 59.559 40.741 0.00 0.00 0.00 2.77
286 287 7.346436 TCCCTCCGTTCCTAAATATAAGTCTTT 59.654 37.037 0.00 0.00 0.00 2.52
287 288 6.842807 TCCCTCCGTTCCTAAATATAAGTCTT 59.157 38.462 0.00 0.00 0.00 3.01
288 289 6.379579 TCCCTCCGTTCCTAAATATAAGTCT 58.620 40.000 0.00 0.00 0.00 3.24
289 290 6.267242 ACTCCCTCCGTTCCTAAATATAAGTC 59.733 42.308 0.00 0.00 0.00 3.01
290 291 6.141790 ACTCCCTCCGTTCCTAAATATAAGT 58.858 40.000 0.00 0.00 0.00 2.24
291 292 6.667558 ACTCCCTCCGTTCCTAAATATAAG 57.332 41.667 0.00 0.00 0.00 1.73
292 293 7.529555 TCTACTCCCTCCGTTCCTAAATATAA 58.470 38.462 0.00 0.00 0.00 0.98
293 294 7.095183 TCTACTCCCTCCGTTCCTAAATATA 57.905 40.000 0.00 0.00 0.00 0.86
294 295 5.961897 TCTACTCCCTCCGTTCCTAAATAT 58.038 41.667 0.00 0.00 0.00 1.28
295 296 5.393068 TCTACTCCCTCCGTTCCTAAATA 57.607 43.478 0.00 0.00 0.00 1.40
296 297 4.261411 TCTACTCCCTCCGTTCCTAAAT 57.739 45.455 0.00 0.00 0.00 1.40
297 298 3.744940 TCTACTCCCTCCGTTCCTAAA 57.255 47.619 0.00 0.00 0.00 1.85
298 299 3.744940 TTCTACTCCCTCCGTTCCTAA 57.255 47.619 0.00 0.00 0.00 2.69
299 300 3.744940 TTTCTACTCCCTCCGTTCCTA 57.255 47.619 0.00 0.00 0.00 2.94
300 301 2.617840 TTTCTACTCCCTCCGTTCCT 57.382 50.000 0.00 0.00 0.00 3.36
301 302 3.908643 AATTTCTACTCCCTCCGTTCC 57.091 47.619 0.00 0.00 0.00 3.62
302 303 7.677454 TTTTAAATTTCTACTCCCTCCGTTC 57.323 36.000 0.00 0.00 0.00 3.95
303 304 7.362660 GCATTTTAAATTTCTACTCCCTCCGTT 60.363 37.037 0.00 0.00 0.00 4.44
304 305 6.095021 GCATTTTAAATTTCTACTCCCTCCGT 59.905 38.462 0.00 0.00 0.00 4.69
305 306 6.318900 AGCATTTTAAATTTCTACTCCCTCCG 59.681 38.462 0.00 0.00 0.00 4.63
306 307 7.646548 AGCATTTTAAATTTCTACTCCCTCC 57.353 36.000 0.00 0.00 0.00 4.30
307 308 8.739972 TCAAGCATTTTAAATTTCTACTCCCTC 58.260 33.333 0.00 0.00 0.00 4.30
308 309 8.523658 GTCAAGCATTTTAAATTTCTACTCCCT 58.476 33.333 0.00 0.00 0.00 4.20
309 310 8.303876 TGTCAAGCATTTTAAATTTCTACTCCC 58.696 33.333 0.00 0.00 0.00 4.30
310 311 9.691362 TTGTCAAGCATTTTAAATTTCTACTCC 57.309 29.630 0.00 0.00 0.00 3.85
371 372 1.065126 AGCTTGCAGATAACCTGGACC 60.065 52.381 0.00 0.00 43.17 4.46
383 385 2.551032 TGACATTGTTCTGAGCTTGCAG 59.449 45.455 0.00 0.00 37.24 4.41
421 426 1.628846 ACACTTCGCCAACCCTTCTAT 59.371 47.619 0.00 0.00 0.00 1.98
422 427 1.053424 ACACTTCGCCAACCCTTCTA 58.947 50.000 0.00 0.00 0.00 2.10
423 428 0.182775 AACACTTCGCCAACCCTTCT 59.817 50.000 0.00 0.00 0.00 2.85
424 429 1.029681 AAACACTTCGCCAACCCTTC 58.970 50.000 0.00 0.00 0.00 3.46
425 430 2.351706 TAAACACTTCGCCAACCCTT 57.648 45.000 0.00 0.00 0.00 3.95
426 431 2.159382 CATAAACACTTCGCCAACCCT 58.841 47.619 0.00 0.00 0.00 4.34
427 432 1.883926 ACATAAACACTTCGCCAACCC 59.116 47.619 0.00 0.00 0.00 4.11
428 433 3.636282 AACATAAACACTTCGCCAACC 57.364 42.857 0.00 0.00 0.00 3.77
429 434 3.733727 CCAAACATAAACACTTCGCCAAC 59.266 43.478 0.00 0.00 0.00 3.77
445 450 5.067273 CACATACTCCAAGGTTACCAAACA 58.933 41.667 3.51 0.00 37.34 2.83
465 470 4.521130 AGCGAAGTATCAAACTCTCACA 57.479 40.909 0.00 0.00 37.50 3.58
474 479 5.977725 GCATAGTGAAGTAGCGAAGTATCAA 59.022 40.000 0.00 0.00 0.00 2.57
476 481 5.764131 AGCATAGTGAAGTAGCGAAGTATC 58.236 41.667 0.00 0.00 0.00 2.24
488 497 5.868257 TGCAACGAAAATAGCATAGTGAAG 58.132 37.500 0.00 0.00 31.05 3.02
523 533 1.081708 CAAACTTGGTTACGCGCCC 60.082 57.895 5.73 4.24 0.00 6.13
529 539 7.821595 AAAACTTTACAGCAAACTTGGTTAC 57.178 32.000 0.00 0.00 36.65 2.50
541 551 8.775220 ACAAAACAAAACAAAAACTTTACAGC 57.225 26.923 0.00 0.00 0.00 4.40
550 560 7.821846 AGGCTCTGATACAAAACAAAACAAAAA 59.178 29.630 0.00 0.00 0.00 1.94
551 561 7.327214 AGGCTCTGATACAAAACAAAACAAAA 58.673 30.769 0.00 0.00 0.00 2.44
554 564 5.827797 AGAGGCTCTGATACAAAACAAAACA 59.172 36.000 17.96 0.00 0.00 2.83
555 565 6.319141 AGAGGCTCTGATACAAAACAAAAC 57.681 37.500 17.96 0.00 0.00 2.43
559 569 4.997395 GTGAAGAGGCTCTGATACAAAACA 59.003 41.667 19.53 4.93 0.00 2.83
560 570 4.092091 CGTGAAGAGGCTCTGATACAAAAC 59.908 45.833 19.53 6.89 0.00 2.43
572 582 2.104281 AGTACAAAACCGTGAAGAGGCT 59.896 45.455 0.00 0.00 0.00 4.58
601 611 5.622460 ACAAACGAACCATTTGTACTGCAAA 60.622 36.000 1.40 0.00 45.99 3.68
627 637 7.868415 CAGACTTATATTTAGAAACGGAGGGAG 59.132 40.741 0.00 0.00 0.00 4.30
628 638 7.343833 ACAGACTTATATTTAGAAACGGAGGGA 59.656 37.037 0.00 0.00 0.00 4.20
629 639 7.498443 ACAGACTTATATTTAGAAACGGAGGG 58.502 38.462 0.00 0.00 0.00 4.30
630 640 8.943909 AACAGACTTATATTTAGAAACGGAGG 57.056 34.615 0.00 0.00 0.00 4.30
647 657 9.706691 TTCGTATTGAAATCTCTAAACAGACTT 57.293 29.630 0.00 0.00 32.37 3.01
648 658 9.141400 GTTCGTATTGAAATCTCTAAACAGACT 57.859 33.333 0.00 0.00 38.60 3.24
649 659 9.141400 AGTTCGTATTGAAATCTCTAAACAGAC 57.859 33.333 0.00 0.00 38.60 3.51
652 662 9.917129 TGTAGTTCGTATTGAAATCTCTAAACA 57.083 29.630 0.00 0.00 38.60 2.83
659 669 9.477484 GGATGTATGTAGTTCGTATTGAAATCT 57.523 33.333 0.00 0.00 38.60 2.40
660 670 8.425491 CGGATGTATGTAGTTCGTATTGAAATC 58.575 37.037 0.00 0.00 38.60 2.17
661 671 7.924412 ACGGATGTATGTAGTTCGTATTGAAAT 59.076 33.333 0.00 0.00 38.60 2.17
662 672 7.259882 ACGGATGTATGTAGTTCGTATTGAAA 58.740 34.615 0.00 0.00 38.60 2.69
663 673 6.798482 ACGGATGTATGTAGTTCGTATTGAA 58.202 36.000 0.00 0.00 0.00 2.69
664 674 6.381481 ACGGATGTATGTAGTTCGTATTGA 57.619 37.500 0.00 0.00 0.00 2.57
665 675 8.738199 AATACGGATGTATGTAGTTCGTATTG 57.262 34.615 14.53 0.00 44.81 1.90
668 678 8.017373 GCTTAATACGGATGTATGTAGTTCGTA 58.983 37.037 0.00 0.00 40.42 3.43
669 679 6.860023 GCTTAATACGGATGTATGTAGTTCGT 59.140 38.462 0.00 0.00 40.42 3.85
670 680 7.060748 CAGCTTAATACGGATGTATGTAGTTCG 59.939 40.741 0.00 0.00 40.42 3.95
671 681 7.328737 CCAGCTTAATACGGATGTATGTAGTTC 59.671 40.741 0.00 0.00 40.42 3.01
672 682 7.014905 TCCAGCTTAATACGGATGTATGTAGTT 59.985 37.037 0.00 0.00 40.42 2.24
673 683 6.492429 TCCAGCTTAATACGGATGTATGTAGT 59.508 38.462 0.00 0.00 40.42 2.73
674 684 6.920817 TCCAGCTTAATACGGATGTATGTAG 58.079 40.000 0.00 0.00 40.42 2.74
675 685 6.904463 TCCAGCTTAATACGGATGTATGTA 57.096 37.500 0.00 0.00 40.42 2.29
676 686 5.801531 TCCAGCTTAATACGGATGTATGT 57.198 39.130 0.00 0.00 40.42 2.29
677 687 8.948631 AATATCCAGCTTAATACGGATGTATG 57.051 34.615 10.50 0.00 40.42 2.39
678 688 8.982723 AGAATATCCAGCTTAATACGGATGTAT 58.017 33.333 10.50 0.00 43.14 2.29
679 689 8.362464 AGAATATCCAGCTTAATACGGATGTA 57.638 34.615 10.50 0.00 38.69 2.29
680 690 7.246171 AGAATATCCAGCTTAATACGGATGT 57.754 36.000 10.50 2.23 38.69 3.06
681 691 9.653287 TTAAGAATATCCAGCTTAATACGGATG 57.347 33.333 10.50 0.00 38.69 3.51
683 693 9.706691 CTTTAAGAATATCCAGCTTAATACGGA 57.293 33.333 0.00 0.00 34.98 4.69
684 694 9.490379 ACTTTAAGAATATCCAGCTTAATACGG 57.510 33.333 0.00 0.00 34.98 4.02
687 697 9.204570 GCGACTTTAAGAATATCCAGCTTAATA 57.795 33.333 0.00 0.00 34.98 0.98
688 698 7.173390 GGCGACTTTAAGAATATCCAGCTTAAT 59.827 37.037 0.00 0.00 34.98 1.40
697 707 7.496263 AGAAAGAAGGGCGACTTTAAGAATATC 59.504 37.037 0.00 0.00 40.21 1.63
707 717 2.551071 CCAGAAGAAAGAAGGGCGACTT 60.551 50.000 0.00 0.00 43.65 3.01
712 722 3.129462 GCAATACCAGAAGAAAGAAGGGC 59.871 47.826 0.00 0.00 0.00 5.19
715 725 7.768120 AGATACAGCAATACCAGAAGAAAGAAG 59.232 37.037 0.00 0.00 0.00 2.85
769 781 4.585955 TTTGCTGGCCACGTTTTAAATA 57.414 36.364 0.00 0.00 0.00 1.40
775 787 1.580815 CAATTTTGCTGGCCACGTTT 58.419 45.000 0.00 0.00 0.00 3.60
901 913 8.044060 TGATACAGATTTTGCAAAGGTAGAAG 57.956 34.615 12.41 3.19 0.00 2.85
904 916 8.218338 AGATGATACAGATTTTGCAAAGGTAG 57.782 34.615 12.41 7.05 0.00 3.18
905 917 9.330063 CTAGATGATACAGATTTTGCAAAGGTA 57.670 33.333 12.41 13.19 0.00 3.08
906 918 7.201767 GCTAGATGATACAGATTTTGCAAAGGT 60.202 37.037 12.41 11.56 0.00 3.50
907 919 7.137426 GCTAGATGATACAGATTTTGCAAAGG 58.863 38.462 12.41 6.36 0.00 3.11
909 921 7.628769 TGCTAGATGATACAGATTTTGCAAA 57.371 32.000 8.05 8.05 0.00 3.68
912 924 6.072618 AGCATGCTAGATGATACAGATTTTGC 60.073 38.462 21.21 0.00 0.00 3.68
913 925 7.041303 ACAGCATGCTAGATGATACAGATTTTG 60.041 37.037 22.19 4.57 42.53 2.44
914 926 6.996879 ACAGCATGCTAGATGATACAGATTTT 59.003 34.615 22.19 0.00 42.53 1.82
917 929 5.741962 ACAGCATGCTAGATGATACAGAT 57.258 39.130 22.19 0.00 42.53 2.90
918 930 5.541953 AACAGCATGCTAGATGATACAGA 57.458 39.130 22.19 0.00 42.53 3.41
919 931 7.719778 TTTAACAGCATGCTAGATGATACAG 57.280 36.000 22.19 6.33 42.53 2.74
920 932 8.681486 ATTTTAACAGCATGCTAGATGATACA 57.319 30.769 22.19 0.00 42.53 2.29
921 933 8.233190 GGATTTTAACAGCATGCTAGATGATAC 58.767 37.037 22.19 7.67 42.53 2.24
922 934 7.118245 CGGATTTTAACAGCATGCTAGATGATA 59.882 37.037 22.19 5.19 42.53 2.15
923 935 6.072838 CGGATTTTAACAGCATGCTAGATGAT 60.073 38.462 22.19 10.37 42.53 2.45
924 936 5.237127 CGGATTTTAACAGCATGCTAGATGA 59.763 40.000 22.19 5.60 42.53 2.92
925 937 5.008019 ACGGATTTTAACAGCATGCTAGATG 59.992 40.000 22.19 11.74 42.53 2.90
926 938 5.008019 CACGGATTTTAACAGCATGCTAGAT 59.992 40.000 22.19 11.93 42.53 1.98
927 939 4.332543 CACGGATTTTAACAGCATGCTAGA 59.667 41.667 22.19 5.50 42.53 2.43
928 940 4.496341 CCACGGATTTTAACAGCATGCTAG 60.496 45.833 22.19 16.90 42.53 3.42
929 941 3.376859 CCACGGATTTTAACAGCATGCTA 59.623 43.478 22.19 3.51 42.53 3.49
930 942 2.164219 CCACGGATTTTAACAGCATGCT 59.836 45.455 16.30 16.30 42.53 3.79
931 943 2.094752 ACCACGGATTTTAACAGCATGC 60.095 45.455 10.51 10.51 42.53 4.06
932 944 3.057596 ACACCACGGATTTTAACAGCATG 60.058 43.478 0.00 0.00 46.00 4.06
933 945 3.153919 ACACCACGGATTTTAACAGCAT 58.846 40.909 0.00 0.00 0.00 3.79
934 946 2.577700 ACACCACGGATTTTAACAGCA 58.422 42.857 0.00 0.00 0.00 4.41
935 947 4.155280 ACATACACCACGGATTTTAACAGC 59.845 41.667 0.00 0.00 0.00 4.40
936 948 5.873179 ACATACACCACGGATTTTAACAG 57.127 39.130 0.00 0.00 0.00 3.16
937 949 6.636562 AAACATACACCACGGATTTTAACA 57.363 33.333 0.00 0.00 0.00 2.41
938 950 7.140048 TCAAAACATACACCACGGATTTTAAC 58.860 34.615 0.00 0.00 0.00 2.01
939 951 7.273320 TCAAAACATACACCACGGATTTTAA 57.727 32.000 0.00 0.00 0.00 1.52
940 952 6.879276 TCAAAACATACACCACGGATTTTA 57.121 33.333 0.00 0.00 0.00 1.52
941 953 5.776173 TCAAAACATACACCACGGATTTT 57.224 34.783 0.00 0.00 0.00 1.82
942 954 5.975693 ATCAAAACATACACCACGGATTT 57.024 34.783 0.00 0.00 0.00 2.17
943 955 5.975693 AATCAAAACATACACCACGGATT 57.024 34.783 0.00 0.00 0.00 3.01
944 956 5.242838 ACAAATCAAAACATACACCACGGAT 59.757 36.000 0.00 0.00 0.00 4.18
945 957 4.580995 ACAAATCAAAACATACACCACGGA 59.419 37.500 0.00 0.00 0.00 4.69
946 958 4.865776 ACAAATCAAAACATACACCACGG 58.134 39.130 0.00 0.00 0.00 4.94
947 959 6.695278 AGAAACAAATCAAAACATACACCACG 59.305 34.615 0.00 0.00 0.00 4.94
948 960 8.419076 AAGAAACAAATCAAAACATACACCAC 57.581 30.769 0.00 0.00 0.00 4.16
949 961 8.877779 CAAAGAAACAAATCAAAACATACACCA 58.122 29.630 0.00 0.00 0.00 4.17
950 962 8.878769 ACAAAGAAACAAATCAAAACATACACC 58.121 29.630 0.00 0.00 0.00 4.16
983 995 1.473677 GCATGCTAGATGTTGCAACCA 59.526 47.619 26.14 15.74 42.74 3.67
984 996 1.747355 AGCATGCTAGATGTTGCAACC 59.253 47.619 26.14 12.17 42.74 3.77
985 997 2.163010 ACAGCATGCTAGATGTTGCAAC 59.837 45.455 22.19 22.83 42.53 4.17
986 998 2.439409 ACAGCATGCTAGATGTTGCAA 58.561 42.857 22.19 0.00 42.53 4.08
988 1000 4.621068 TTAACAGCATGCTAGATGTTGC 57.379 40.909 25.14 8.11 46.40 4.17
989 1001 6.380995 TGTTTTAACAGCATGCTAGATGTTG 58.619 36.000 25.14 14.34 46.40 3.33
1018 1030 5.292101 GGCGGAGTGTGCTGATATATAAATC 59.708 44.000 0.00 0.00 0.00 2.17
1019 1031 5.178797 GGCGGAGTGTGCTGATATATAAAT 58.821 41.667 0.00 0.00 0.00 1.40
1020 1032 4.039852 TGGCGGAGTGTGCTGATATATAAA 59.960 41.667 0.00 0.00 0.00 1.40
1021 1033 3.576550 TGGCGGAGTGTGCTGATATATAA 59.423 43.478 0.00 0.00 0.00 0.98
1022 1034 3.161866 TGGCGGAGTGTGCTGATATATA 58.838 45.455 0.00 0.00 0.00 0.86
1023 1035 1.970640 TGGCGGAGTGTGCTGATATAT 59.029 47.619 0.00 0.00 0.00 0.86
1024 1036 1.341209 CTGGCGGAGTGTGCTGATATA 59.659 52.381 0.00 0.00 0.00 0.86
1040 1071 2.358898 TGCAGAGACAAGTTTTTCTGGC 59.641 45.455 9.06 4.74 37.97 4.85
1052 1083 5.008613 GGTAAAATTGAACACTGCAGAGACA 59.991 40.000 23.35 15.13 0.00 3.41
1061 1092 6.655078 AGCATTCAGGTAAAATTGAACACT 57.345 33.333 0.00 0.00 36.26 3.55
1063 1094 7.094377 GGAGTAGCATTCAGGTAAAATTGAACA 60.094 37.037 0.00 0.00 36.26 3.18
1064 1095 7.094377 TGGAGTAGCATTCAGGTAAAATTGAAC 60.094 37.037 0.00 0.00 36.26 3.18
1069 1100 9.289782 GAATATGGAGTAGCATTCAGGTAAAAT 57.710 33.333 0.00 0.00 30.87 1.82
1090 1121 4.406649 CAGGGGGTTGCAATTGAAGAATAT 59.593 41.667 10.34 0.00 0.00 1.28
1106 1137 1.566298 GGAGCAAGATGACAGGGGGT 61.566 60.000 0.00 0.00 0.00 4.95
1181 1212 3.954200 TGTCCTGCATGCAGAAGAATAA 58.046 40.909 42.21 20.47 46.30 1.40
1182 1213 3.632643 TGTCCTGCATGCAGAAGAATA 57.367 42.857 42.21 22.92 46.30 1.75
1248 1279 1.816835 CATGAGACAAACAGGCAGCAT 59.183 47.619 0.00 0.00 0.00 3.79
1270 1301 3.596214 GCATCTCCAGGAACGTAGAAAA 58.404 45.455 0.00 0.00 0.00 2.29
1537 1586 4.310769 CGTTCCCATCAGATAGGATTGAC 58.689 47.826 0.00 0.00 0.00 3.18
1885 1942 0.171231 TCAGTCGCAGTGAATCTCCG 59.829 55.000 0.00 0.00 0.00 4.63
1940 1997 1.202758 TGGGAACTCTTCACGTGCATT 60.203 47.619 11.67 0.00 35.25 3.56
2039 2135 5.412594 TGAAGTATGAACAATGCTCCTGAAC 59.587 40.000 0.00 0.00 29.81 3.18
2045 2141 7.493971 ACTGTCTATGAAGTATGAACAATGCTC 59.506 37.037 0.00 0.00 29.81 4.26
2168 2264 6.676456 GCCACTGCAATAGAAATACTCAAGTG 60.676 42.308 0.00 0.00 37.47 3.16
2418 2529 4.227864 AGATGTGAGGGATCTTCCAAAC 57.772 45.455 0.00 0.00 38.64 2.93
2461 2572 1.070758 ACACTCCGAAGCTTGTCATGT 59.929 47.619 2.10 0.00 0.00 3.21
2473 2584 2.937149 CGTAGAGATCTTCACACTCCGA 59.063 50.000 0.00 0.00 0.00 4.55
2493 2604 3.955650 TCCCCTTTGAAGAGTAGAACG 57.044 47.619 0.00 0.00 0.00 3.95
2499 2610 2.716424 TCAACCATCCCCTTTGAAGAGT 59.284 45.455 0.00 0.00 0.00 3.24
2510 2621 0.678048 GACACCAGCTCAACCATCCC 60.678 60.000 0.00 0.00 0.00 3.85
2512 2623 0.678048 GGGACACCAGCTCAACCATC 60.678 60.000 0.00 0.00 36.50 3.51
2620 2778 6.449635 TCCCCTTGATGTATTTTTCGATTG 57.550 37.500 0.00 0.00 0.00 2.67
2783 2944 5.276584 GCATTAGTAACGCTCTCAAGATGTG 60.277 44.000 0.00 0.00 0.00 3.21
2784 2945 4.806247 GCATTAGTAACGCTCTCAAGATGT 59.194 41.667 0.00 0.00 0.00 3.06
2850 3011 2.445145 TCCCTCACCATTCCAACTTGAA 59.555 45.455 0.00 0.00 0.00 2.69
2894 3055 3.540367 GACGGGCCGGAGTGGAAAA 62.540 63.158 31.78 0.00 42.00 2.29
2941 3102 1.068333 CGAGCAACTTGAAATGGGTGG 60.068 52.381 0.00 0.00 0.00 4.61
2943 3104 2.270352 TCGAGCAACTTGAAATGGGT 57.730 45.000 0.00 0.00 0.00 4.51
2944 3105 2.489329 ACATCGAGCAACTTGAAATGGG 59.511 45.455 0.00 0.00 0.00 4.00
2952 3113 6.854496 TTTTACTTGTACATCGAGCAACTT 57.146 33.333 0.00 0.00 0.00 2.66
2955 3116 6.293190 CCACTTTTTACTTGTACATCGAGCAA 60.293 38.462 0.00 0.00 0.00 3.91
2999 3160 6.486320 TGTCAAGATGAAACAATGAGCAAGTA 59.514 34.615 0.00 0.00 0.00 2.24
3030 3192 6.894654 AGGTCCACATCGAGATGATATAGATT 59.105 38.462 18.76 0.00 41.20 2.40
3038 3200 5.336770 GCATATTAGGTCCACATCGAGATGA 60.337 44.000 18.76 0.00 41.20 2.92
3040 3202 4.528206 TGCATATTAGGTCCACATCGAGAT 59.472 41.667 0.00 0.00 0.00 2.75
3041 3203 3.895041 TGCATATTAGGTCCACATCGAGA 59.105 43.478 0.00 0.00 0.00 4.04
3043 3205 4.528206 AGATGCATATTAGGTCCACATCGA 59.472 41.667 0.00 0.00 37.95 3.59
3044 3206 4.825422 AGATGCATATTAGGTCCACATCG 58.175 43.478 0.00 0.00 37.95 3.84
3081 3243 2.430921 CGCCGGTGTGTCTCTGTC 60.431 66.667 6.91 0.00 0.00 3.51
3085 3247 2.845752 TAATGGCGCCGGTGTGTCTC 62.846 60.000 23.90 0.00 0.00 3.36
3168 3330 7.948034 ATAAGAAAAACCCATCATAACGGAA 57.052 32.000 0.00 0.00 0.00 4.30
3187 3349 8.421784 ACGGTCTTTGCATCTATTAGAATAAGA 58.578 33.333 0.00 2.71 0.00 2.10
3211 3375 4.533222 GGAAATTGCCCGTATATTCAACG 58.467 43.478 0.00 0.00 40.01 4.10
3358 3523 6.469410 AGTATGTCACAATAAGAACCCGAAA 58.531 36.000 0.00 0.00 0.00 3.46
3370 3535 5.179452 AGGCCTTGTAAGTATGTCACAAT 57.821 39.130 0.00 0.00 32.14 2.71
3376 3541 2.093658 CGTGGAGGCCTTGTAAGTATGT 60.094 50.000 6.77 0.00 0.00 2.29
3379 3544 0.248289 GCGTGGAGGCCTTGTAAGTA 59.752 55.000 6.77 0.00 0.00 2.24
3380 3545 1.003718 GCGTGGAGGCCTTGTAAGT 60.004 57.895 6.77 0.00 0.00 2.24
3381 3546 1.003839 TGCGTGGAGGCCTTGTAAG 60.004 57.895 6.77 0.00 0.00 2.34
3382 3547 1.003839 CTGCGTGGAGGCCTTGTAA 60.004 57.895 6.77 0.00 0.00 2.41
3396 3561 3.825611 CCCCCGAAAATGCCTGCG 61.826 66.667 0.00 0.00 0.00 5.18
3414 3582 0.605319 TCGGCAGATGAAACGCCTTT 60.605 50.000 0.00 0.00 43.95 3.11
3442 3616 2.819608 TGGAGCAAAAATGGCAGACTAC 59.180 45.455 0.00 0.00 0.00 2.73
3447 3621 3.389925 TTTCTGGAGCAAAAATGGCAG 57.610 42.857 0.00 0.00 0.00 4.85
3450 3624 3.499537 GGCTTTTTCTGGAGCAAAAATGG 59.500 43.478 0.00 0.00 40.63 3.16
3471 3645 2.644992 GCGGGTTTGCTTCACTGG 59.355 61.111 0.00 0.00 0.00 4.00
3474 3648 3.595108 GAGCGCGGGTTTGCTTCAC 62.595 63.158 8.83 0.00 42.60 3.18
3475 3649 3.353836 GAGCGCGGGTTTGCTTCA 61.354 61.111 8.83 0.00 42.60 3.02
3476 3650 2.200170 ATTGAGCGCGGGTTTGCTTC 62.200 55.000 8.83 0.00 42.60 3.86
3479 3659 1.917782 TACATTGAGCGCGGGTTTGC 61.918 55.000 8.83 0.00 0.00 3.68
3493 3673 2.125269 GCACTCCCGCGGTACATT 60.125 61.111 26.12 0.00 0.00 2.71


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.