Multiple sequence alignment - TraesCS5B01G288500

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Download Multiple Sequence Alignment: (Fasta) (Clustal)


BLAST Results


Shown here are the results of a BLAST search against the genome using the input sequence. The pipeline uses this to extract flanking regions for cloning. If the result of the multiple sequence alignment is not as expected, these results could be used for further investigation.

qseqid sseqid percentage.identical alignment.length no.mismatch no.gap.openings qstart qend sstart send evalue bitscore
0 TraesCS5B01G288500 chr5B 100.000 4256 0 0 1 4256 473794226 473789971 0.000000e+00 7860.0
1 TraesCS5B01G288500 chr5B 80.266 451 49 20 3525 3949 473783876 473783440 1.920000e-78 303.0
2 TraesCS5B01G288500 chr5B 94.611 167 9 0 1 167 696239266 696239432 4.220000e-65 259.0
3 TraesCS5B01G288500 chr5B 88.770 187 20 1 3489 3674 473775978 473775792 1.190000e-55 228.0
4 TraesCS5B01G288500 chr5B 85.714 112 16 0 505 616 625126016 625126127 7.480000e-23 119.0
5 TraesCS5B01G288500 chr5B 84.821 112 17 0 505 616 628705775 628705886 3.480000e-21 113.0
6 TraesCS5B01G288500 chr5B 85.714 91 13 0 3871 3961 473775708 473775618 3.500000e-16 97.1
7 TraesCS5B01G288500 chr5B 90.909 66 3 3 3723 3788 591655323 591655385 7.580000e-13 86.1
8 TraesCS5B01G288500 chr5B 93.478 46 3 0 228 273 504779288 504779243 7.640000e-08 69.4
9 TraesCS5B01G288500 chr5D 90.303 1516 86 21 343 1821 393941401 393939910 0.000000e+00 1929.0
10 TraesCS5B01G288500 chr5D 90.143 1187 70 11 2573 3743 393939385 393938230 0.000000e+00 1500.0
11 TraesCS5B01G288500 chr5D 87.986 283 32 2 3962 4242 393937992 393937710 2.450000e-87 333.0
12 TraesCS5B01G288500 chr5D 89.057 265 22 5 3486 3743 393909030 393908766 5.310000e-84 322.0
13 TraesCS5B01G288500 chr5D 88.550 262 29 1 3483 3743 393905504 393905243 2.470000e-82 316.0
14 TraesCS5B01G288500 chr5D 95.580 181 7 1 163 342 393979426 393979246 5.380000e-74 289.0
15 TraesCS5B01G288500 chr5D 84.407 295 39 7 3964 4253 215137986 215138278 2.510000e-72 283.0
16 TraesCS5B01G288500 chr5D 90.062 161 13 2 3711 3870 455608084 455607926 5.580000e-49 206.0
17 TraesCS5B01G288500 chr5D 86.607 112 15 0 505 616 64254931 64255042 1.610000e-24 124.0
18 TraesCS5B01G288500 chr5A 90.785 1172 63 21 2585 3715 495934613 495933446 0.000000e+00 1524.0
19 TraesCS5B01G288500 chr5A 86.878 945 50 24 731 1634 495936077 495935166 0.000000e+00 990.0
20 TraesCS5B01G288500 chr5A 86.926 283 31 5 3962 4242 495933216 495932938 3.200000e-81 313.0
21 TraesCS5B01G288500 chr5A 88.346 266 21 7 3486 3743 495928057 495927794 1.150000e-80 311.0
22 TraesCS5B01G288500 chr5A 89.697 165 15 2 1 164 342225963 342226126 4.310000e-50 209.0
23 TraesCS5B01G288500 chr5A 94.048 84 5 0 3866 3949 495927796 495927713 1.240000e-25 128.0
24 TraesCS5B01G288500 chr5A 84.615 91 7 5 2290 2380 495934966 495934883 2.730000e-12 84.2
25 TraesCS5B01G288500 chr7D 80.906 508 60 25 2254 2743 584609208 584609696 2.420000e-97 366.0
26 TraesCS5B01G288500 chr7D 85.778 225 17 2 1834 2043 214019421 214019197 1.540000e-54 224.0
27 TraesCS5B01G288500 chr7D 85.455 220 16 4 1834 2037 484967239 484967458 9.270000e-52 215.0
28 TraesCS5B01G288500 chr7D 91.129 124 11 0 1834 1957 334050737 334050614 7.320000e-38 169.0
29 TraesCS5B01G288500 chr7D 83.036 112 19 0 505 616 514994559 514994448 7.530000e-18 102.0
30 TraesCS5B01G288500 chr7B 79.279 555 72 26 2213 2743 656299610 656299075 8.760000e-92 348.0
31 TraesCS5B01G288500 chr7B 79.959 489 58 29 2273 2743 652980580 652981046 1.480000e-84 324.0
32 TraesCS5B01G288500 chr7B 79.331 508 67 24 2254 2743 652412764 652413251 5.310000e-84 322.0
33 TraesCS5B01G288500 chr7B 78.136 558 68 38 2213 2743 652257797 652258327 5.350000e-79 305.0
34 TraesCS5B01G288500 chr7B 78.740 508 70 23 2254 2743 652451874 652452361 5.350000e-79 305.0
35 TraesCS5B01G288500 chr7B 97.656 128 3 0 3741 3868 332242888 332242761 1.990000e-53 220.0
36 TraesCS5B01G288500 chr7B 84.100 239 21 5 1834 2055 230014379 230014617 9.270000e-52 215.0
37 TraesCS5B01G288500 chr7B 82.857 245 24 4 1834 2060 513529217 513528973 2.010000e-48 204.0
38 TraesCS5B01G288500 chr7B 83.628 226 21 4 1834 2043 18046801 18047026 9.330000e-47 198.0
39 TraesCS5B01G288500 chr7B 80.682 176 26 5 505 672 622518824 622518649 3.450000e-26 130.0
40 TraesCS5B01G288500 chr7B 75.743 202 38 9 481 672 479528860 479528660 1.630000e-14 91.6
41 TraesCS5B01G288500 chr7B 78.417 139 18 4 3731 3867 574516245 574516117 3.530000e-11 80.5
42 TraesCS5B01G288500 chr7A 78.843 553 74 30 2214 2743 676957713 676957181 2.450000e-87 333.0
43 TraesCS5B01G288500 chr7A 94.479 163 9 0 3 165 671410578 671410740 7.060000e-63 252.0
44 TraesCS5B01G288500 chr7A 82.540 126 19 3 219 341 582213045 582212920 1.620000e-19 108.0
45 TraesCS5B01G288500 chr7A 88.235 51 5 1 217 266 229206347 229206297 4.600000e-05 60.2
46 TraesCS5B01G288500 chr4D 86.429 280 34 4 3962 4238 93285717 93285995 1.920000e-78 303.0
47 TraesCS5B01G288500 chr4D 97.674 129 2 1 3740 3868 165913358 165913231 1.990000e-53 220.0
48 TraesCS5B01G288500 chr4D 87.313 134 17 0 339 472 464135174 464135307 2.050000e-33 154.0
49 TraesCS5B01G288500 chr2D 83.784 296 44 4 3962 4253 472948706 472949001 1.170000e-70 278.0
50 TraesCS5B01G288500 chr2D 91.736 121 10 0 1834 1954 393365939 393366059 7.320000e-38 169.0
51 TraesCS5B01G288500 chr2D 87.879 99 12 0 517 615 512173855 512173757 2.690000e-22 117.0
52 TraesCS5B01G288500 chr2D 90.789 76 6 1 541 616 585112008 585112082 2.710000e-17 100.0
53 TraesCS5B01G288500 chr3B 84.211 285 31 11 3964 4242 289283077 289283353 9.070000e-67 265.0
54 TraesCS5B01G288500 chr3B 85.398 226 17 5 1834 2043 323409919 323409694 1.990000e-53 220.0
55 TraesCS5B01G288500 chr3B 95.522 134 6 0 3736 3869 593869158 593869291 9.270000e-52 215.0
56 TraesCS5B01G288500 chr3B 82.119 151 16 7 543 684 562902486 562902338 7.480000e-23 119.0
57 TraesCS5B01G288500 chr2B 83.571 280 36 10 3965 4238 623367927 623367652 1.960000e-63 254.0
58 TraesCS5B01G288500 chr2B 82.432 296 44 8 3962 4253 552295136 552295427 7.060000e-63 252.0
59 TraesCS5B01G288500 chr2B 83.099 284 40 8 3965 4242 788580116 788580397 7.060000e-63 252.0
60 TraesCS5B01G288500 chr2B 83.691 233 20 5 1834 2050 392598292 392598062 2.010000e-48 204.0
61 TraesCS5B01G288500 chr2B 91.781 146 10 2 3723 3867 658452328 658452472 7.220000e-48 202.0
62 TraesCS5B01G288500 chr2B 78.756 193 25 9 505 684 775108117 775107928 9.670000e-22 115.0
63 TraesCS5B01G288500 chr2B 80.208 96 16 3 225 318 52858500 52858406 7.640000e-08 69.4
64 TraesCS5B01G288500 chr4B 85.217 230 15 7 1834 2047 633220964 633220738 7.170000e-53 219.0
65 TraesCS5B01G288500 chr4B 84.071 226 20 4 1834 2043 468835942 468835717 2.010000e-48 204.0
66 TraesCS5B01G288500 chr4B 83.036 224 22 2 1834 2041 75358825 75359048 5.620000e-44 189.0
67 TraesCS5B01G288500 chr4B 81.592 201 29 8 1851 2046 194786920 194787117 4.400000e-35 159.0
68 TraesCS5B01G288500 chr4B 97.368 38 1 0 228 265 4852863 4852900 9.880000e-07 65.8
69 TraesCS5B01G288500 chr1B 96.923 130 4 0 3740 3869 372226510 372226381 7.170000e-53 219.0
70 TraesCS5B01G288500 chr1B 81.098 164 19 6 550 704 209655800 209655960 2.080000e-23 121.0
71 TraesCS5B01G288500 chr1B 85.714 112 16 0 505 616 588637679 588637790 7.480000e-23 119.0
72 TraesCS5B01G288500 chr1B 88.235 102 6 5 3725 3821 452797126 452797226 2.690000e-22 117.0
73 TraesCS5B01G288500 chr1B 82.407 108 11 7 505 607 41354483 41354587 2.110000e-13 87.9
74 TraesCS5B01G288500 chr1B 91.489 47 3 1 219 264 209998377 209998331 3.550000e-06 63.9
75 TraesCS5B01G288500 chr3A 96.212 132 5 0 3738 3869 182282954 182282823 2.580000e-52 217.0
76 TraesCS5B01G288500 chr2A 94.928 138 7 0 3741 3878 746976981 746977118 2.580000e-52 217.0
77 TraesCS5B01G288500 chr2A 93.056 144 9 1 3738 3881 623081315 623081457 4.310000e-50 209.0
78 TraesCS5B01G288500 chr3D 84.956 226 18 2 1834 2043 361276381 361276156 9.270000e-52 215.0
79 TraesCS5B01G288500 chr3D 92.517 147 9 2 3733 3877 67064920 67064774 4.310000e-50 209.0
80 TraesCS5B01G288500 chr3D 84.753 223 18 6 1834 2040 250383094 250382872 4.310000e-50 209.0
81 TraesCS5B01G288500 chr3D 83.857 223 20 2 1834 2040 221524688 221524466 9.330000e-47 198.0
82 TraesCS5B01G288500 chr3D 94.382 89 5 0 79 167 552761128 552761040 2.060000e-28 137.0
83 TraesCS5B01G288500 chr3D 80.838 167 23 4 514 672 347571368 347571203 5.780000e-24 122.0
84 TraesCS5B01G288500 chr3D 77.612 134 28 2 490 621 9114931 9114798 3.530000e-11 80.5
85 TraesCS5B01G288500 chr3D 81.905 105 10 7 218 319 593077519 593077617 3.530000e-11 80.5
86 TraesCS5B01G288500 chr6D 84.889 225 19 2 1834 2043 393594291 393594067 3.330000e-51 213.0
87 TraesCS5B01G288500 chr6D 80.723 83 14 2 535 615 444469183 444469101 3.550000e-06 63.9
88 TraesCS5B01G288500 chr6B 81.503 173 23 4 480 643 652947524 652947696 2.670000e-27 134.0
89 TraesCS5B01G288500 chr1A 83.824 136 22 0 481 616 560044055 560044190 3.450000e-26 130.0
90 TraesCS5B01G288500 chr1D 81.720 93 17 0 226 318 302908450 302908358 1.270000e-10 78.7
91 TraesCS5B01G288500 chr1D 76.712 146 22 9 550 685 357442380 357442523 2.120000e-08 71.3


These results show the homologous regions that are presented in the multiple sequence alignment. HSPs from the BLAST search that are within 2000 bases of each other have been grouped together. Homologous regions that are purely upstream or downstream may be removed if they don't overlap both primers.

query scaffold start end length rev.comp avg.bitscore max.bitscore avg.percent.identical query.start query.end num_hsp groupid homo_length
0 TraesCS5B01G288500 chr5B 473789971 473794226 4255 True 7860.0 7860 100.000000 1 4256 1 chr5B.!!$R2 4255
1 TraesCS5B01G288500 chr5D 393937710 393941401 3691 True 1254.0 1929 89.477333 343 4242 3 chr5D.!!$R4 3899
2 TraesCS5B01G288500 chr5D 393905243 393909030 3787 True 319.0 322 88.803500 3483 3743 2 chr5D.!!$R3 260
3 TraesCS5B01G288500 chr5A 495932938 495936077 3139 True 727.8 1524 87.301000 731 4242 4 chr5A.!!$R2 3511
4 TraesCS5B01G288500 chr7B 656299075 656299610 535 True 348.0 348 79.279000 2213 2743 1 chr7B.!!$R6 530
5 TraesCS5B01G288500 chr7B 652257797 652258327 530 False 305.0 305 78.136000 2213 2743 1 chr7B.!!$F3 530
6 TraesCS5B01G288500 chr7A 676957181 676957713 532 True 333.0 333 78.843000 2214 2743 1 chr7A.!!$R3 529

AutoCloner calculated primer pairs

These primer pairs were selected by Autocloner to minimize primer penalty (calculated by Primer3), whilst remaining within the specified product range where possible.

Download AutoCloner chosen primers as CSV: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
88 89 0.173708 GCTCTGGTCCGGAAGTAGTG 59.826 60.0 5.23 7.13 0.00 2.74 F
1475 1530 0.037605 GCTCCTGCTTTGCTGCATTT 60.038 50.0 1.84 0.00 42.48 2.32 F
2432 2557 0.251922 ACAATGTTGCCCCTGCTCAT 60.252 50.0 0.00 0.00 38.71 2.90 F
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability Orientation
1796 1851 0.310543 TGTGCCACTTGATTCGCAAC 59.689 50.0 0.00 0.0 32.04 4.17 R
2438 2563 0.034476 CAACTCAGAGTGGCAGAGCA 59.966 55.0 3.05 0.0 33.75 4.26 R
3653 4011 0.105408 AAGCTGGCCTTTGTTTGCAG 59.895 50.0 3.32 0.0 0.00 4.41 R

All possible primers

Listed here are all possible primers based on the multiple sequence alignment and SNPs generated previously. A lower penalty score indicates a better primer. If the AutoCloner primers did not work during PCR or sequencing, these could be used as alternatives.

Download all possible primers: (Forward) (Reverse)
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
22 23 5.175090 GCTGTAATTTGGCTAGTCATTCC 57.825 43.478 0.00 0.00 0.00 3.01
23 24 4.884164 GCTGTAATTTGGCTAGTCATTCCT 59.116 41.667 0.00 0.00 0.00 3.36
24 25 5.358160 GCTGTAATTTGGCTAGTCATTCCTT 59.642 40.000 0.00 0.00 0.00 3.36
25 26 6.678900 GCTGTAATTTGGCTAGTCATTCCTTG 60.679 42.308 0.00 0.00 0.00 3.61
26 27 5.652014 TGTAATTTGGCTAGTCATTCCTTGG 59.348 40.000 0.00 0.00 0.00 3.61
27 28 2.128771 TTGGCTAGTCATTCCTTGGC 57.871 50.000 0.00 0.00 34.26 4.52
28 29 1.289160 TGGCTAGTCATTCCTTGGCT 58.711 50.000 0.00 0.00 44.33 4.75
32 33 4.079787 TGGCTAGTCATTCCTTGGCTAATT 60.080 41.667 0.00 0.00 41.88 1.40
33 34 4.889995 GGCTAGTCATTCCTTGGCTAATTT 59.110 41.667 0.00 0.00 41.88 1.82
34 35 5.360999 GGCTAGTCATTCCTTGGCTAATTTT 59.639 40.000 0.00 0.00 41.88 1.82
35 36 6.268566 GCTAGTCATTCCTTGGCTAATTTTG 58.731 40.000 0.00 0.00 41.88 2.44
37 38 5.332743 AGTCATTCCTTGGCTAATTTTGGA 58.667 37.500 0.00 0.00 38.94 3.53
39 40 6.071165 AGTCATTCCTTGGCTAATTTTGGAAG 60.071 38.462 7.23 1.60 38.94 3.46
41 42 6.496565 TCATTCCTTGGCTAATTTTGGAAGAA 59.503 34.615 7.23 0.00 37.07 2.52
42 43 5.722021 TCCTTGGCTAATTTTGGAAGAAC 57.278 39.130 0.00 0.00 0.00 3.01
43 44 5.144100 TCCTTGGCTAATTTTGGAAGAACA 58.856 37.500 0.00 0.00 0.00 3.18
44 45 5.010617 TCCTTGGCTAATTTTGGAAGAACAC 59.989 40.000 0.00 0.00 0.00 3.32
45 46 5.221422 CCTTGGCTAATTTTGGAAGAACACA 60.221 40.000 0.00 0.00 0.00 3.72
46 47 5.860941 TGGCTAATTTTGGAAGAACACAA 57.139 34.783 0.00 0.00 0.00 3.33
47 48 5.596845 TGGCTAATTTTGGAAGAACACAAC 58.403 37.500 0.00 0.00 0.00 3.32
48 49 5.127845 TGGCTAATTTTGGAAGAACACAACA 59.872 36.000 0.00 0.00 0.00 3.33
49 50 5.462068 GGCTAATTTTGGAAGAACACAACAC 59.538 40.000 0.00 0.00 0.00 3.32
50 51 5.462068 GCTAATTTTGGAAGAACACAACACC 59.538 40.000 0.00 0.00 0.00 4.16
51 52 3.495670 TTTTGGAAGAACACAACACCG 57.504 42.857 0.00 0.00 0.00 4.94
52 53 2.404923 TTGGAAGAACACAACACCGA 57.595 45.000 0.00 0.00 0.00 4.69
53 54 2.404923 TGGAAGAACACAACACCGAA 57.595 45.000 0.00 0.00 0.00 4.30
54 55 2.011222 TGGAAGAACACAACACCGAAC 58.989 47.619 0.00 0.00 0.00 3.95
55 56 1.004292 GGAAGAACACAACACCGAACG 60.004 52.381 0.00 0.00 0.00 3.95
56 57 1.004292 GAAGAACACAACACCGAACGG 60.004 52.381 11.83 11.83 42.03 4.44
67 68 3.427670 CGAACGGTGGTTTGGCTT 58.572 55.556 0.00 0.00 36.24 4.35
69 70 1.362355 GAACGGTGGTTTGGCTTGG 59.638 57.895 0.00 0.00 36.24 3.61
70 71 2.693250 GAACGGTGGTTTGGCTTGGC 62.693 60.000 0.00 0.00 36.24 4.52
71 72 2.912025 CGGTGGTTTGGCTTGGCT 60.912 61.111 0.00 0.00 0.00 4.75
72 73 2.919494 CGGTGGTTTGGCTTGGCTC 61.919 63.158 0.00 0.00 0.00 4.70
73 74 1.531602 GGTGGTTTGGCTTGGCTCT 60.532 57.895 0.00 0.00 0.00 4.09
74 75 1.662044 GTGGTTTGGCTTGGCTCTG 59.338 57.895 0.00 0.00 0.00 3.35
75 76 1.531365 TGGTTTGGCTTGGCTCTGG 60.531 57.895 0.00 0.00 0.00 3.86
76 77 1.531602 GGTTTGGCTTGGCTCTGGT 60.532 57.895 0.00 0.00 0.00 4.00
77 78 1.527433 GGTTTGGCTTGGCTCTGGTC 61.527 60.000 0.00 0.00 0.00 4.02
78 79 1.228552 TTTGGCTTGGCTCTGGTCC 60.229 57.895 0.00 0.00 0.00 4.46
79 80 3.551496 TTGGCTTGGCTCTGGTCCG 62.551 63.158 0.00 0.00 0.00 4.79
80 81 4.785453 GGCTTGGCTCTGGTCCGG 62.785 72.222 0.00 0.00 0.00 5.14
81 82 3.706373 GCTTGGCTCTGGTCCGGA 61.706 66.667 0.00 0.00 0.00 5.14
82 83 3.068881 CTTGGCTCTGGTCCGGAA 58.931 61.111 5.23 0.00 0.00 4.30
84 85 1.831652 CTTGGCTCTGGTCCGGAAGT 61.832 60.000 5.23 0.00 0.00 3.01
85 86 0.543410 TTGGCTCTGGTCCGGAAGTA 60.543 55.000 5.23 0.00 0.00 2.24
87 88 0.971447 GGCTCTGGTCCGGAAGTAGT 60.971 60.000 5.23 0.00 0.00 2.73
88 89 0.173708 GCTCTGGTCCGGAAGTAGTG 59.826 60.000 5.23 7.13 0.00 2.74
90 91 1.202582 CTCTGGTCCGGAAGTAGTGTG 59.797 57.143 5.23 0.00 0.00 3.82
91 92 1.202964 TCTGGTCCGGAAGTAGTGTGA 60.203 52.381 5.23 0.00 0.00 3.58
92 93 1.202582 CTGGTCCGGAAGTAGTGTGAG 59.797 57.143 5.23 0.00 0.00 3.51
93 94 1.202964 TGGTCCGGAAGTAGTGTGAGA 60.203 52.381 5.23 0.00 0.00 3.27
94 95 2.100989 GGTCCGGAAGTAGTGTGAGAT 58.899 52.381 5.23 0.00 0.00 2.75
95 96 3.285484 GGTCCGGAAGTAGTGTGAGATA 58.715 50.000 5.23 0.00 0.00 1.98
96 97 3.890147 GGTCCGGAAGTAGTGTGAGATAT 59.110 47.826 5.23 0.00 0.00 1.63
98 99 5.282510 GTCCGGAAGTAGTGTGAGATATTG 58.717 45.833 5.23 0.00 0.00 1.90
100 101 6.039047 GTCCGGAAGTAGTGTGAGATATTGTA 59.961 42.308 5.23 0.00 0.00 2.41
101 102 6.262496 TCCGGAAGTAGTGTGAGATATTGTAG 59.738 42.308 0.00 0.00 0.00 2.74
102 103 6.262496 CCGGAAGTAGTGTGAGATATTGTAGA 59.738 42.308 0.00 0.00 0.00 2.59
103 104 7.201794 CCGGAAGTAGTGTGAGATATTGTAGAA 60.202 40.741 0.00 0.00 0.00 2.10
104 105 7.644551 CGGAAGTAGTGTGAGATATTGTAGAAC 59.355 40.741 0.00 0.00 0.00 3.01
105 106 7.644551 GGAAGTAGTGTGAGATATTGTAGAACG 59.355 40.741 0.00 0.00 0.00 3.95
106 107 7.860918 AGTAGTGTGAGATATTGTAGAACGA 57.139 36.000 0.00 0.00 0.00 3.85
109 110 7.392494 AGTGTGAGATATTGTAGAACGAGAA 57.608 36.000 0.00 0.00 0.00 2.87
110 111 8.001881 AGTGTGAGATATTGTAGAACGAGAAT 57.998 34.615 0.00 0.00 0.00 2.40
111 112 7.918033 AGTGTGAGATATTGTAGAACGAGAATG 59.082 37.037 0.00 0.00 0.00 2.67
114 115 9.731819 GTGAGATATTGTAGAACGAGAATGTAA 57.268 33.333 0.00 0.00 0.00 2.41
117 118 9.915629 AGATATTGTAGAACGAGAATGTAATCC 57.084 33.333 0.00 0.00 0.00 3.01
118 119 9.915629 GATATTGTAGAACGAGAATGTAATCCT 57.084 33.333 0.00 0.00 0.00 3.24
120 121 6.525578 TGTAGAACGAGAATGTAATCCTGT 57.474 37.500 0.00 0.00 0.00 4.00
123 124 8.525316 TGTAGAACGAGAATGTAATCCTGTAAA 58.475 33.333 0.00 0.00 0.00 2.01
124 125 7.829378 AGAACGAGAATGTAATCCTGTAAAC 57.171 36.000 0.00 0.00 0.00 2.01
125 126 7.612677 AGAACGAGAATGTAATCCTGTAAACT 58.387 34.615 0.00 0.00 0.00 2.66
126 127 7.545965 AGAACGAGAATGTAATCCTGTAAACTG 59.454 37.037 0.00 0.00 0.00 3.16
128 129 6.590292 ACGAGAATGTAATCCTGTAAACTGTG 59.410 38.462 0.00 0.00 0.00 3.66
129 130 6.455646 CGAGAATGTAATCCTGTAAACTGTGC 60.456 42.308 0.00 0.00 0.00 4.57
131 132 6.372659 AGAATGTAATCCTGTAAACTGTGCTG 59.627 38.462 0.00 0.00 0.00 4.41
132 133 5.222079 TGTAATCCTGTAAACTGTGCTGA 57.778 39.130 0.00 0.00 0.00 4.26
134 135 4.357918 AATCCTGTAAACTGTGCTGAGT 57.642 40.909 0.00 0.00 0.00 3.41
135 136 5.483685 AATCCTGTAAACTGTGCTGAGTA 57.516 39.130 0.00 0.00 0.00 2.59
136 137 4.948341 TCCTGTAAACTGTGCTGAGTAA 57.052 40.909 0.00 0.00 0.00 2.24
138 139 5.237815 TCCTGTAAACTGTGCTGAGTAATG 58.762 41.667 0.00 0.00 0.00 1.90
139 140 4.142816 CCTGTAAACTGTGCTGAGTAATGC 60.143 45.833 0.00 0.00 0.00 3.56
140 141 4.384940 TGTAAACTGTGCTGAGTAATGCA 58.615 39.130 0.00 0.00 36.79 3.96
141 142 4.819088 TGTAAACTGTGCTGAGTAATGCAA 59.181 37.500 0.00 0.00 41.10 4.08
142 143 4.494350 AAACTGTGCTGAGTAATGCAAG 57.506 40.909 0.00 0.00 41.10 4.01
143 144 3.131709 ACTGTGCTGAGTAATGCAAGT 57.868 42.857 0.00 0.00 41.10 3.16
144 145 3.480470 ACTGTGCTGAGTAATGCAAGTT 58.520 40.909 0.00 0.00 41.10 2.66
146 147 3.743521 TGTGCTGAGTAATGCAAGTTCT 58.256 40.909 0.00 0.00 41.10 3.01
147 148 4.136796 TGTGCTGAGTAATGCAAGTTCTT 58.863 39.130 0.00 0.00 41.10 2.52
148 149 4.580167 TGTGCTGAGTAATGCAAGTTCTTT 59.420 37.500 0.00 0.00 41.10 2.52
149 150 5.067674 TGTGCTGAGTAATGCAAGTTCTTTT 59.932 36.000 0.00 0.00 41.10 2.27
150 151 5.400485 GTGCTGAGTAATGCAAGTTCTTTTG 59.600 40.000 0.00 0.00 41.10 2.44
151 152 5.067674 TGCTGAGTAATGCAAGTTCTTTTGT 59.932 36.000 0.00 0.00 36.15 2.83
152 153 5.979517 GCTGAGTAATGCAAGTTCTTTTGTT 59.020 36.000 0.00 0.00 0.00 2.83
153 154 6.142958 GCTGAGTAATGCAAGTTCTTTTGTTC 59.857 38.462 0.00 0.00 0.00 3.18
154 155 6.503524 TGAGTAATGCAAGTTCTTTTGTTCC 58.496 36.000 0.00 0.00 0.00 3.62
157 158 1.474478 TGCAAGTTCTTTTGTTCCGCA 59.526 42.857 0.00 0.00 0.00 5.69
158 159 2.094494 TGCAAGTTCTTTTGTTCCGCAA 60.094 40.909 0.00 0.00 34.87 4.85
159 160 2.926838 GCAAGTTCTTTTGTTCCGCAAA 59.073 40.909 0.00 0.00 44.52 3.68
182 183 3.508744 AAAAATCCACACCGCATGATC 57.491 42.857 0.00 0.00 0.00 2.92
183 184 1.392589 AAATCCACACCGCATGATCC 58.607 50.000 0.00 0.00 0.00 3.36
184 185 0.815213 AATCCACACCGCATGATCCG 60.815 55.000 0.00 0.00 0.00 4.18
185 186 1.971505 ATCCACACCGCATGATCCGT 61.972 55.000 0.00 0.00 0.00 4.69
186 187 1.745115 CCACACCGCATGATCCGTT 60.745 57.895 0.00 0.00 0.00 4.44
187 188 0.461163 CCACACCGCATGATCCGTTA 60.461 55.000 0.00 0.00 0.00 3.18
189 190 0.461339 ACACCGCATGATCCGTTACC 60.461 55.000 0.00 0.00 0.00 2.85
191 192 1.067974 CACCGCATGATCCGTTACCTA 59.932 52.381 0.00 0.00 0.00 3.08
192 193 1.968493 ACCGCATGATCCGTTACCTAT 59.032 47.619 0.00 0.00 0.00 2.57
193 194 3.057104 CACCGCATGATCCGTTACCTATA 60.057 47.826 0.00 0.00 0.00 1.31
194 195 3.767673 ACCGCATGATCCGTTACCTATAT 59.232 43.478 0.00 0.00 0.00 0.86
195 196 4.112634 CCGCATGATCCGTTACCTATATG 58.887 47.826 0.00 0.00 0.00 1.78
196 197 4.381612 CCGCATGATCCGTTACCTATATGT 60.382 45.833 0.00 0.00 0.00 2.29
198 199 5.637810 CGCATGATCCGTTACCTATATGTTT 59.362 40.000 0.00 0.00 0.00 2.83
200 201 7.519002 GCATGATCCGTTACCTATATGTTTTC 58.481 38.462 0.00 0.00 0.00 2.29
201 202 7.387948 GCATGATCCGTTACCTATATGTTTTCT 59.612 37.037 0.00 0.00 0.00 2.52
202 203 8.926710 CATGATCCGTTACCTATATGTTTTCTC 58.073 37.037 0.00 0.00 0.00 2.87
203 204 7.439381 TGATCCGTTACCTATATGTTTTCTCC 58.561 38.462 0.00 0.00 0.00 3.71
204 205 6.795144 TCCGTTACCTATATGTTTTCTCCA 57.205 37.500 0.00 0.00 0.00 3.86
205 206 7.185318 TCCGTTACCTATATGTTTTCTCCAA 57.815 36.000 0.00 0.00 0.00 3.53
206 207 7.798071 TCCGTTACCTATATGTTTTCTCCAAT 58.202 34.615 0.00 0.00 0.00 3.16
207 208 7.929785 TCCGTTACCTATATGTTTTCTCCAATC 59.070 37.037 0.00 0.00 0.00 2.67
208 209 7.713507 CCGTTACCTATATGTTTTCTCCAATCA 59.286 37.037 0.00 0.00 0.00 2.57
209 210 9.273016 CGTTACCTATATGTTTTCTCCAATCAT 57.727 33.333 0.00 0.00 0.00 2.45
213 214 9.347240 ACCTATATGTTTTCTCCAATCATCAAG 57.653 33.333 0.00 0.00 0.00 3.02
214 215 8.790718 CCTATATGTTTTCTCCAATCATCAAGG 58.209 37.037 0.00 0.00 0.00 3.61
215 216 9.347240 CTATATGTTTTCTCCAATCATCAAGGT 57.653 33.333 0.00 0.00 0.00 3.50
216 217 6.923199 ATGTTTTCTCCAATCATCAAGGTT 57.077 33.333 0.00 0.00 0.00 3.50
217 218 6.088016 TGTTTTCTCCAATCATCAAGGTTG 57.912 37.500 0.00 0.00 0.00 3.77
218 219 5.010922 TGTTTTCTCCAATCATCAAGGTTGG 59.989 40.000 0.70 0.70 42.91 3.77
219 220 3.370840 TCTCCAATCATCAAGGTTGGG 57.629 47.619 7.24 0.00 42.06 4.12
220 221 2.025037 TCTCCAATCATCAAGGTTGGGG 60.025 50.000 7.24 4.04 43.39 4.96
222 223 2.381618 TCCAATCATCAAGGTTGGGGAA 59.618 45.455 7.24 0.00 42.06 3.97
224 225 3.582208 CCAATCATCAAGGTTGGGGAAAA 59.418 43.478 0.00 0.00 38.93 2.29
225 226 4.225717 CCAATCATCAAGGTTGGGGAAAAT 59.774 41.667 0.00 0.00 38.93 1.82
228 229 5.226194 TCATCAAGGTTGGGGAAAATTTG 57.774 39.130 0.00 0.00 0.00 2.32
229 230 4.041444 TCATCAAGGTTGGGGAAAATTTGG 59.959 41.667 0.00 0.00 0.00 3.28
231 232 3.135530 TCAAGGTTGGGGAAAATTTGGTG 59.864 43.478 0.00 0.00 0.00 4.17
232 233 1.419762 AGGTTGGGGAAAATTTGGTGC 59.580 47.619 0.00 0.00 0.00 5.01
233 234 1.141858 GGTTGGGGAAAATTTGGTGCA 59.858 47.619 0.00 0.00 0.00 4.57
234 235 2.217750 GTTGGGGAAAATTTGGTGCAC 58.782 47.619 8.80 8.80 0.00 4.57
235 236 0.761802 TGGGGAAAATTTGGTGCACC 59.238 50.000 29.67 29.67 0.00 5.01
238 239 0.391228 GGAAAATTTGGTGCACCGGT 59.609 50.000 30.07 15.93 39.43 5.28
249 250 3.964875 CACCGGTGCTTGTGGTGC 61.965 66.667 24.02 0.00 45.85 5.01
251 252 2.031919 CCGGTGCTTGTGGTGCTA 59.968 61.111 0.00 0.00 0.00 3.49
252 253 2.325082 CCGGTGCTTGTGGTGCTAC 61.325 63.158 0.00 0.00 0.00 3.58
253 254 2.325082 CGGTGCTTGTGGTGCTACC 61.325 63.158 0.00 0.00 39.22 3.18
264 265 2.920384 TGCTACCAGTGCACCGGA 60.920 61.111 25.94 6.17 35.31 5.14
265 266 2.434359 GCTACCAGTGCACCGGAC 60.434 66.667 25.94 10.53 0.00 4.79
266 267 2.264794 CTACCAGTGCACCGGACC 59.735 66.667 25.94 0.00 0.00 4.46
267 268 2.203728 TACCAGTGCACCGGACCT 60.204 61.111 25.94 6.02 0.00 3.85
268 269 2.227089 CTACCAGTGCACCGGACCTC 62.227 65.000 25.94 0.00 0.00 3.85
269 270 4.394712 CCAGTGCACCGGACCTCC 62.395 72.222 14.31 0.00 0.00 4.30
284 285 5.541098 GGACCTCCGTAACACATTTTAAG 57.459 43.478 0.00 0.00 0.00 1.85
285 286 5.240121 GGACCTCCGTAACACATTTTAAGA 58.760 41.667 0.00 0.00 0.00 2.10
287 288 6.183360 GGACCTCCGTAACACATTTTAAGATG 60.183 42.308 4.50 4.50 0.00 2.90
288 289 6.235664 ACCTCCGTAACACATTTTAAGATGT 58.764 36.000 5.82 5.82 40.76 3.06
289 290 6.713450 ACCTCCGTAACACATTTTAAGATGTT 59.287 34.615 8.82 5.23 38.15 2.71
290 291 7.229907 ACCTCCGTAACACATTTTAAGATGTTT 59.770 33.333 8.82 9.35 38.15 2.83
291 292 8.079809 CCTCCGTAACACATTTTAAGATGTTTT 58.920 33.333 8.82 11.34 38.15 2.43
326 327 5.970317 AAAATGAGCTCATTCATGTGTCA 57.030 34.783 35.67 4.35 45.06 3.58
327 328 6.525578 AAAATGAGCTCATTCATGTGTCAT 57.474 33.333 35.67 18.19 45.06 3.06
328 329 5.752892 AATGAGCTCATTCATGTGTCATC 57.247 39.130 31.78 0.00 42.45 2.92
329 330 4.210724 TGAGCTCATTCATGTGTCATCA 57.789 40.909 13.74 0.00 0.00 3.07
330 331 4.581868 TGAGCTCATTCATGTGTCATCAA 58.418 39.130 13.74 0.00 0.00 2.57
331 332 5.190677 TGAGCTCATTCATGTGTCATCAAT 58.809 37.500 13.74 0.00 0.00 2.57
332 333 5.065988 TGAGCTCATTCATGTGTCATCAATG 59.934 40.000 13.74 1.04 0.00 2.82
334 335 5.417894 AGCTCATTCATGTGTCATCAATGTT 59.582 36.000 6.32 0.00 0.00 2.71
335 336 6.071560 AGCTCATTCATGTGTCATCAATGTTT 60.072 34.615 6.32 0.00 0.00 2.83
336 337 6.034577 GCTCATTCATGTGTCATCAATGTTTG 59.965 38.462 6.32 1.67 0.00 2.93
337 338 6.983984 TCATTCATGTGTCATCAATGTTTGT 58.016 32.000 6.32 0.00 0.00 2.83
340 341 6.146601 TCATGTGTCATCAATGTTTGTTGT 57.853 33.333 0.00 0.00 33.27 3.32
341 342 6.207928 TCATGTGTCATCAATGTTTGTTGTC 58.792 36.000 0.00 0.00 33.27 3.18
342 343 5.573337 TGTGTCATCAATGTTTGTTGTCA 57.427 34.783 0.00 0.00 33.27 3.58
344 345 6.035217 TGTGTCATCAATGTTTGTTGTCAAG 58.965 36.000 0.00 0.00 32.89 3.02
345 346 5.459762 GTGTCATCAATGTTTGTTGTCAAGG 59.540 40.000 0.00 0.00 32.89 3.61
346 347 5.359292 TGTCATCAATGTTTGTTGTCAAGGA 59.641 36.000 0.00 0.00 34.88 3.36
348 349 5.359292 TCATCAATGTTTGTTGTCAAGGACA 59.641 36.000 0.00 0.00 41.09 4.02
350 351 6.951062 TCAATGTTTGTTGTCAAGGACATA 57.049 33.333 0.00 0.00 42.40 2.29
360 361 4.385825 TGTCAAGGACATAGTGGTGTTTC 58.614 43.478 0.00 0.00 37.67 2.78
383 384 1.003718 CAGACCGGGGTTCAACTCC 60.004 63.158 6.32 0.00 34.62 3.85
403 404 4.065281 CCGGGAGCGAGTTTCCGT 62.065 66.667 5.95 0.00 40.78 4.69
404 405 2.809601 CGGGAGCGAGTTTCCGTG 60.810 66.667 0.00 0.00 37.92 4.94
405 406 2.434359 GGGAGCGAGTTTCCGTGG 60.434 66.667 0.00 0.00 35.48 4.94
418 419 4.373116 CGTGGTCTCACCCGGGTG 62.373 72.222 42.62 42.62 46.64 4.61
439 440 8.852135 CGGGTGGGCTTTTTCTATAAAAATATA 58.148 33.333 0.00 0.00 42.22 0.86
477 478 3.255642 CCCACGGATCTCATTTTGTTGTT 59.744 43.478 0.00 0.00 0.00 2.83
479 480 4.023279 CCACGGATCTCATTTTGTTGTTGA 60.023 41.667 0.00 0.00 0.00 3.18
497 498 9.897744 TGTTGTTGAAAAATTTTAAACATTGCA 57.102 22.222 18.92 15.31 31.53 4.08
539 540 9.116067 ACAAATTTAACACCGTATAGTATGCAT 57.884 29.630 3.79 3.79 0.00 3.96
545 546 9.634163 TTAACACCGTATAGTATGCATCATAAG 57.366 33.333 0.19 2.44 0.00 1.73
1221 1262 4.821589 GCGGAGGCCAGGAAGTCG 62.822 72.222 5.01 0.00 0.00 4.18
1337 1381 2.436646 CGGCATGCTCTTTCCGGT 60.437 61.111 18.92 0.00 38.35 5.28
1346 1391 2.014857 GCTCTTTCCGGTTACCATTCC 58.985 52.381 0.00 0.00 0.00 3.01
1364 1409 0.941542 CCTTTTCAACGCCGTCTTGA 59.058 50.000 0.00 0.00 0.00 3.02
1377 1422 1.465777 CGTCTTGATCTGCATTGCACA 59.534 47.619 7.38 1.46 33.79 4.57
1378 1423 2.096980 CGTCTTGATCTGCATTGCACAT 59.903 45.455 7.38 2.66 33.79 3.21
1379 1424 3.427098 CGTCTTGATCTGCATTGCACATT 60.427 43.478 7.38 0.00 33.79 2.71
1380 1425 4.491676 GTCTTGATCTGCATTGCACATTT 58.508 39.130 7.38 0.00 33.79 2.32
1381 1426 4.326278 GTCTTGATCTGCATTGCACATTTG 59.674 41.667 7.38 0.00 33.79 2.32
1393 1438 0.040157 CACATTTGCACTCCGTGGTG 60.040 55.000 0.00 1.35 39.91 4.17
1433 1478 4.224433 CAGTGTGCTTGTTGCTTAATCAG 58.776 43.478 0.00 0.00 43.37 2.90
1438 1488 2.855180 CTTGTTGCTTAATCAGGCGTG 58.145 47.619 0.00 0.00 0.00 5.34
1444 1494 1.202076 GCTTAATCAGGCGTGCACTTC 60.202 52.381 16.19 6.73 0.00 3.01
1450 1500 1.001974 TCAGGCGTGCACTTCTACATT 59.998 47.619 16.19 0.00 0.00 2.71
1451 1501 1.129251 CAGGCGTGCACTTCTACATTG 59.871 52.381 16.19 0.00 0.00 2.82
1457 1507 2.160417 GTGCACTTCTACATTGACTGGC 59.840 50.000 10.32 0.00 0.00 4.85
1474 1529 1.590147 GCTCCTGCTTTGCTGCATT 59.410 52.632 1.84 0.00 42.48 3.56
1475 1530 0.037605 GCTCCTGCTTTGCTGCATTT 60.038 50.000 1.84 0.00 42.48 2.32
1476 1531 1.992170 CTCCTGCTTTGCTGCATTTC 58.008 50.000 1.84 0.00 42.48 2.17
1505 1560 3.508793 AGCAGATTTGTCAATCACAAGGG 59.491 43.478 0.00 0.00 45.98 3.95
1544 1599 1.216710 GCAGAGAGCTACGTTGCCT 59.783 57.895 18.33 14.43 41.15 4.75
1550 1605 3.195825 AGAGAGCTACGTTGCCTATTTGT 59.804 43.478 18.33 0.00 0.00 2.83
1551 1606 3.933332 GAGAGCTACGTTGCCTATTTGTT 59.067 43.478 18.33 0.00 0.00 2.83
1675 1730 1.107945 AGGAGACTCGGCTAAAGAGC 58.892 55.000 0.00 0.00 43.00 4.09
1697 1752 7.882271 AGAGCAAAAGAAAGATATGAACTGAGT 59.118 33.333 0.00 0.00 0.00 3.41
1710 1765 9.352784 GATATGAACTGAGTAGATATTGAGCAC 57.647 37.037 0.00 0.00 0.00 4.40
1732 1787 6.503524 CACACTTTTAACCTGCATTGTACTT 58.496 36.000 0.00 0.00 0.00 2.24
1743 1798 5.407387 CCTGCATTGTACTTACACGTTTACT 59.593 40.000 0.00 0.00 35.64 2.24
1784 1839 4.984161 GCTGCATGTTGTTAACAGATTTGT 59.016 37.500 8.56 0.00 45.95 2.83
1801 1856 6.307800 CAGATTTGTTAATTACAAGGGTTGCG 59.692 38.462 0.00 0.00 46.81 4.85
1803 1858 5.769484 TTGTTAATTACAAGGGTTGCGAA 57.231 34.783 0.00 0.00 41.73 4.70
1806 1861 5.473846 TGTTAATTACAAGGGTTGCGAATCA 59.526 36.000 0.00 0.00 32.64 2.57
1811 1866 1.068333 CAAGGGTTGCGAATCAAGTGG 60.068 52.381 0.00 0.00 34.91 4.00
1820 1875 1.133598 CGAATCAAGTGGCACATGCAT 59.866 47.619 21.41 9.99 44.52 3.96
1821 1876 2.536365 GAATCAAGTGGCACATGCATG 58.464 47.619 25.09 25.09 44.52 4.06
1822 1877 1.552578 ATCAAGTGGCACATGCATGT 58.447 45.000 26.61 26.61 44.52 3.21
1823 1878 0.883153 TCAAGTGGCACATGCATGTC 59.117 50.000 29.23 21.63 44.52 3.06
1824 1879 0.599060 CAAGTGGCACATGCATGTCA 59.401 50.000 29.23 21.56 44.52 3.58
1826 1881 3.684113 TGGCACATGCATGTCACC 58.316 55.556 29.58 29.58 44.36 4.02
1827 1882 1.228490 TGGCACATGCATGTCACCA 60.228 52.632 32.85 32.85 44.36 4.17
1828 1883 0.826672 TGGCACATGCATGTCACCAA 60.827 50.000 33.74 22.83 39.67 3.67
1829 1884 0.317799 GGCACATGCATGTCACCAAA 59.682 50.000 30.59 0.00 44.36 3.28
1830 1885 1.270199 GGCACATGCATGTCACCAAAA 60.270 47.619 30.59 0.00 44.36 2.44
1832 1887 3.068560 GCACATGCATGTCACCAAAAAT 58.931 40.909 29.23 0.96 39.39 1.82
1833 1888 3.120477 GCACATGCATGTCACCAAAAATG 60.120 43.478 29.23 14.80 39.39 2.32
1834 1889 4.059511 CACATGCATGTCACCAAAAATGT 58.940 39.130 29.23 1.74 39.39 2.71
1835 1890 4.512198 CACATGCATGTCACCAAAAATGTT 59.488 37.500 29.23 0.00 39.39 2.71
1836 1891 4.751098 ACATGCATGTCACCAAAAATGTTC 59.249 37.500 26.61 0.00 35.87 3.18
1837 1892 4.397481 TGCATGTCACCAAAAATGTTCA 57.603 36.364 0.00 0.00 0.00 3.18
1838 1893 4.958509 TGCATGTCACCAAAAATGTTCAT 58.041 34.783 0.00 0.00 0.00 2.57
1839 1894 6.094193 TGCATGTCACCAAAAATGTTCATA 57.906 33.333 0.00 0.00 0.00 2.15
1840 1895 6.157904 TGCATGTCACCAAAAATGTTCATAG 58.842 36.000 0.00 0.00 0.00 2.23
1843 1898 6.325919 TGTCACCAAAAATGTTCATAGGTC 57.674 37.500 0.00 0.00 0.00 3.85
1844 1899 5.242838 TGTCACCAAAAATGTTCATAGGTCC 59.757 40.000 0.00 0.00 0.00 4.46
1845 1900 4.770010 TCACCAAAAATGTTCATAGGTCCC 59.230 41.667 0.00 0.00 0.00 4.46
1846 1901 4.081697 CACCAAAAATGTTCATAGGTCCCC 60.082 45.833 0.00 0.00 0.00 4.81
1847 1902 4.093011 CCAAAAATGTTCATAGGTCCCCA 58.907 43.478 0.00 0.00 0.00 4.96
1848 1903 4.716287 CCAAAAATGTTCATAGGTCCCCAT 59.284 41.667 0.00 0.00 0.00 4.00
1850 1905 5.937975 AAAATGTTCATAGGTCCCCATTG 57.062 39.130 0.00 0.00 0.00 2.82
1851 1906 4.608170 AATGTTCATAGGTCCCCATTGT 57.392 40.909 0.00 0.00 0.00 2.71
1854 1909 5.725551 TGTTCATAGGTCCCCATTGTATT 57.274 39.130 0.00 0.00 0.00 1.89
1856 1911 6.126409 TGTTCATAGGTCCCCATTGTATTTC 58.874 40.000 0.00 0.00 0.00 2.17
1857 1912 4.968259 TCATAGGTCCCCATTGTATTTCG 58.032 43.478 0.00 0.00 0.00 3.46
1859 1914 1.214424 AGGTCCCCATTGTATTTCGGG 59.786 52.381 0.00 0.00 38.52 5.14
1860 1915 1.213430 GGTCCCCATTGTATTTCGGGA 59.787 52.381 0.00 0.00 41.62 5.14
1861 1916 2.158519 GGTCCCCATTGTATTTCGGGAT 60.159 50.000 0.00 0.00 44.50 3.85
1862 1917 3.073356 GGTCCCCATTGTATTTCGGGATA 59.927 47.826 0.00 0.00 44.50 2.59
1863 1918 4.446600 GGTCCCCATTGTATTTCGGGATAA 60.447 45.833 0.00 0.00 44.50 1.75
1864 1919 5.134661 GTCCCCATTGTATTTCGGGATAAA 58.865 41.667 0.00 0.00 44.50 1.40
1866 1921 6.266786 GTCCCCATTGTATTTCGGGATAAATT 59.733 38.462 0.00 0.00 44.50 1.82
1867 1922 6.841755 TCCCCATTGTATTTCGGGATAAATTT 59.158 34.615 0.00 0.00 41.62 1.82
1869 1924 7.440856 CCCCATTGTATTTCGGGATAAATTTTG 59.559 37.037 0.00 0.00 41.62 2.44
1871 1926 9.030301 CCATTGTATTTCGGGATAAATTTTGAC 57.970 33.333 0.00 0.00 31.63 3.18
1872 1927 9.030301 CATTGTATTTCGGGATAAATTTTGACC 57.970 33.333 0.00 0.00 31.63 4.02
1873 1928 7.704578 TGTATTTCGGGATAAATTTTGACCA 57.295 32.000 0.00 0.00 31.63 4.02
1874 1929 8.299990 TGTATTTCGGGATAAATTTTGACCAT 57.700 30.769 0.00 0.00 31.63 3.55
1876 1931 9.893305 GTATTTCGGGATAAATTTTGACCATAG 57.107 33.333 0.00 0.00 31.63 2.23
1880 1935 8.165239 TCGGGATAAATTTTGACCATAGATTG 57.835 34.615 0.00 0.00 0.00 2.67
1882 1937 8.629158 CGGGATAAATTTTGACCATAGATTGAA 58.371 33.333 0.00 0.00 0.00 2.69
1883 1938 9.750125 GGGATAAATTTTGACCATAGATTGAAC 57.250 33.333 0.00 0.00 0.00 3.18
1951 2006 9.620660 AAAAGTATGTTCAAATACGAATCCAAC 57.379 29.630 0.00 0.00 37.96 3.77
1952 2007 7.000575 AGTATGTTCAAATACGAATCCAACG 57.999 36.000 0.00 0.00 37.96 4.10
1953 2008 6.814644 AGTATGTTCAAATACGAATCCAACGA 59.185 34.615 0.00 0.00 37.96 3.85
1957 2012 5.463499 TCAAATACGAATCCAACGACATG 57.537 39.130 0.00 0.00 34.70 3.21
1958 2013 3.944422 AATACGAATCCAACGACATGC 57.056 42.857 0.00 0.00 34.70 4.06
1959 2014 2.371910 TACGAATCCAACGACATGCA 57.628 45.000 0.00 0.00 34.70 3.96
1961 2016 2.083774 ACGAATCCAACGACATGCATT 58.916 42.857 0.00 0.00 34.70 3.56
1962 2017 3.266636 ACGAATCCAACGACATGCATTA 58.733 40.909 0.00 0.00 34.70 1.90
1964 2019 4.028383 CGAATCCAACGACATGCATTAAC 58.972 43.478 0.00 0.00 0.00 2.01
1966 2021 5.581126 AATCCAACGACATGCATTAACAT 57.419 34.783 0.00 0.00 0.00 2.71
1968 2023 5.384063 TCCAACGACATGCATTAACATTT 57.616 34.783 0.00 0.00 0.00 2.32
1969 2024 5.777802 TCCAACGACATGCATTAACATTTT 58.222 33.333 0.00 0.00 0.00 1.82
1970 2025 5.632764 TCCAACGACATGCATTAACATTTTG 59.367 36.000 0.00 0.00 0.00 2.44
1971 2026 5.404968 CCAACGACATGCATTAACATTTTGT 59.595 36.000 0.00 0.00 0.00 2.83
1975 2030 7.367285 ACGACATGCATTAACATTTTGTTAGT 58.633 30.769 0.00 0.00 42.93 2.24
1976 2031 7.865385 ACGACATGCATTAACATTTTGTTAGTT 59.135 29.630 0.00 0.00 42.93 2.24
1977 2032 9.335891 CGACATGCATTAACATTTTGTTAGTTA 57.664 29.630 0.00 0.00 42.93 2.24
2013 2068 8.364142 TCAAATTTTGACACAAACTATAAGGGG 58.636 33.333 7.74 0.00 34.08 4.79
2015 2070 6.887626 TTTTGACACAAACTATAAGGGGAC 57.112 37.500 0.00 0.00 0.00 4.46
2031 2086 1.415289 GGGACCTATAAACCAGGACGG 59.585 57.143 0.00 0.00 42.50 4.79
2033 2088 2.364647 GGACCTATAAACCAGGACGGAG 59.635 54.545 0.00 0.00 38.63 4.63
2034 2089 2.364647 GACCTATAAACCAGGACGGAGG 59.635 54.545 0.00 0.00 38.63 4.30
2037 2092 3.573110 CCTATAAACCAGGACGGAGGTAG 59.427 52.174 0.00 0.00 37.07 3.18
2087 2142 9.362539 CTCTGTAAGCTTTTATAAGACGGTTTA 57.637 33.333 3.20 0.00 32.92 2.01
2088 2143 9.362539 TCTGTAAGCTTTTATAAGACGGTTTAG 57.637 33.333 3.20 0.00 32.92 1.85
2089 2144 9.362539 CTGTAAGCTTTTATAAGACGGTTTAGA 57.637 33.333 3.20 0.00 32.92 2.10
2103 2158 8.842358 AGACGGTTTAGATTTGTGATCTAAAA 57.158 30.769 17.86 0.00 46.14 1.52
2105 2160 9.704098 GACGGTTTAGATTTGTGATCTAAAATC 57.296 33.333 17.86 18.45 46.14 2.17
2107 2162 7.850982 CGGTTTAGATTTGTGATCTAAAATCGG 59.149 37.037 17.86 10.33 46.14 4.18
2108 2163 8.889717 GGTTTAGATTTGTGATCTAAAATCGGA 58.110 33.333 17.86 13.05 46.14 4.55
2136 2191 9.813446 ACGTATTATAAAAGTTTACAGAGGGAG 57.187 33.333 0.00 0.00 0.00 4.30
2137 2192 8.762426 CGTATTATAAAAGTTTACAGAGGGAGC 58.238 37.037 0.00 0.00 0.00 4.70
2140 2195 4.439253 AAAAGTTTACAGAGGGAGCAGT 57.561 40.909 0.00 0.00 0.00 4.40
2144 2199 4.161102 AGTTTACAGAGGGAGCAGTAACT 58.839 43.478 0.00 0.00 0.00 2.24
2145 2200 5.331069 AGTTTACAGAGGGAGCAGTAACTA 58.669 41.667 0.00 0.00 0.00 2.24
2146 2201 5.958987 AGTTTACAGAGGGAGCAGTAACTAT 59.041 40.000 0.00 0.00 0.00 2.12
2159 2214 7.275999 GGAGCAGTAACTATTTTGTACTCTCAC 59.724 40.741 0.00 0.00 0.00 3.51
2168 2223 8.652290 ACTATTTTGTACTCTCACCTCTTTCTT 58.348 33.333 0.00 0.00 0.00 2.52
2185 2241 8.238481 CTCTTTCTTAGAGTTTTACTGAGCAG 57.762 38.462 0.00 0.00 44.54 4.24
2188 2244 7.948278 TTCTTAGAGTTTTACTGAGCAGTTC 57.052 36.000 8.60 0.07 42.54 3.01
2192 2248 9.477484 CTTAGAGTTTTACTGAGCAGTTCTTAA 57.523 33.333 8.60 0.00 42.54 1.85
2193 2249 7.954788 AGAGTTTTACTGAGCAGTTCTTAAG 57.045 36.000 8.60 0.00 42.54 1.85
2194 2250 7.727181 AGAGTTTTACTGAGCAGTTCTTAAGA 58.273 34.615 8.60 0.00 42.54 2.10
2196 2252 8.732746 AGTTTTACTGAGCAGTTCTTAAGAAA 57.267 30.769 19.30 2.35 42.54 2.52
2218 2274 8.903820 AGAAAAATAATACTACTGAACATGCCC 58.096 33.333 0.00 0.00 0.00 5.36
2226 2282 1.526575 CTGAACATGCCCGGTTGCTT 61.527 55.000 0.00 0.00 0.00 3.91
2242 2300 5.118817 CGGTTGCTTCAGAGTTTTAGTAGTC 59.881 44.000 0.00 0.00 0.00 2.59
2263 2325 3.865929 CTGCCTGCGGTGTCGTTCT 62.866 63.158 0.00 0.00 38.89 3.01
2302 2364 6.959361 CCATGTATTGGCACTAGAATGTTAC 58.041 40.000 0.00 0.00 39.09 2.50
2305 2367 6.040247 TGTATTGGCACTAGAATGTTACGAG 58.960 40.000 0.00 0.00 0.00 4.18
2315 2377 9.684448 CACTAGAATGTTACGAGTGATATGAAT 57.316 33.333 0.00 0.00 41.20 2.57
2375 2466 7.540055 CAGAATAACAATCCAGAGCTCAAAAAC 59.460 37.037 17.77 0.00 0.00 2.43
2395 2502 1.674441 CGATGATCAGCACAGGCATTT 59.326 47.619 12.15 0.00 44.61 2.32
2396 2503 2.540973 CGATGATCAGCACAGGCATTTG 60.541 50.000 12.15 0.00 44.61 2.32
2397 2504 0.528924 TGATCAGCACAGGCATTTGC 59.471 50.000 0.25 0.25 44.61 3.68
2398 2505 0.528924 GATCAGCACAGGCATTTGCA 59.471 50.000 12.50 0.00 44.61 4.08
2399 2506 1.136305 GATCAGCACAGGCATTTGCAT 59.864 47.619 12.50 0.00 44.61 3.96
2431 2556 0.469705 AACAATGTTGCCCCTGCTCA 60.470 50.000 0.00 0.00 38.71 4.26
2432 2557 0.251922 ACAATGTTGCCCCTGCTCAT 60.252 50.000 0.00 0.00 38.71 2.90
2435 2560 2.362120 GTTGCCCCTGCTCATGCT 60.362 61.111 0.00 0.00 40.48 3.79
2436 2561 2.044650 TTGCCCCTGCTCATGCTC 60.045 61.111 0.00 0.00 40.48 4.26
2437 2562 2.609534 TTGCCCCTGCTCATGCTCT 61.610 57.895 0.00 0.00 40.48 4.09
2438 2563 2.146146 TTGCCCCTGCTCATGCTCTT 62.146 55.000 0.00 0.00 40.48 2.85
2439 2564 2.119655 GCCCCTGCTCATGCTCTTG 61.120 63.158 0.00 0.00 40.48 3.02
2440 2565 2.119655 CCCCTGCTCATGCTCTTGC 61.120 63.158 0.00 0.00 40.48 4.01
2442 2567 1.096386 CCCTGCTCATGCTCTTGCTC 61.096 60.000 0.00 0.00 40.48 4.26
2452 2577 1.020333 GCTCTTGCTCTGCCACTCTG 61.020 60.000 0.00 0.00 36.03 3.35
2453 2578 0.607112 CTCTTGCTCTGCCACTCTGA 59.393 55.000 0.00 0.00 0.00 3.27
2471 2623 6.483640 CACTCTGAGTTGCTACCTAAACTTTT 59.516 38.462 7.77 0.00 36.77 2.27
2473 2625 7.656542 ACTCTGAGTTGCTACCTAAACTTTTAC 59.343 37.037 4.06 0.00 36.77 2.01
2474 2626 7.732996 TCTGAGTTGCTACCTAAACTTTTACT 58.267 34.615 0.00 0.00 36.77 2.24
2475 2627 7.656137 TCTGAGTTGCTACCTAAACTTTTACTG 59.344 37.037 0.00 0.00 36.77 2.74
2502 2730 3.244976 GGGTTCAATCGTTTGCAATGAG 58.755 45.455 0.00 0.00 32.61 2.90
2530 2758 5.049060 TGAACCAGATTAACCGTGTGAATTG 60.049 40.000 0.00 0.00 0.00 2.32
2533 2761 4.406069 CAGATTAACCGTGTGAATTGCAG 58.594 43.478 0.00 0.00 0.00 4.41
2534 2762 4.072131 AGATTAACCGTGTGAATTGCAGT 58.928 39.130 0.00 0.00 0.00 4.40
2536 2764 1.388547 AACCGTGTGAATTGCAGTGT 58.611 45.000 0.00 0.00 0.00 3.55
2537 2765 1.388547 ACCGTGTGAATTGCAGTGTT 58.611 45.000 0.00 0.00 0.00 3.32
2538 2766 1.748493 ACCGTGTGAATTGCAGTGTTT 59.252 42.857 0.00 0.00 0.00 2.83
2540 2768 2.788786 CCGTGTGAATTGCAGTGTTTTC 59.211 45.455 0.00 0.00 0.00 2.29
2541 2769 3.489059 CCGTGTGAATTGCAGTGTTTTCT 60.489 43.478 0.00 0.00 0.00 2.52
2542 2770 3.483196 CGTGTGAATTGCAGTGTTTTCTG 59.517 43.478 0.00 0.00 38.35 3.02
2543 2771 4.423732 GTGTGAATTGCAGTGTTTTCTGT 58.576 39.130 0.00 0.00 37.70 3.41
2576 2892 1.270826 TCGTCAACAGAAGAGCTCAGG 59.729 52.381 17.77 4.45 0.00 3.86
2622 2941 2.027625 GCAGGTGCTGTACGTGGTC 61.028 63.158 17.79 1.57 43.56 4.02
2625 2944 0.826256 AGGTGCTGTACGTGGTCTGA 60.826 55.000 0.00 0.00 0.00 3.27
2627 2946 1.350193 GTGCTGTACGTGGTCTGATG 58.650 55.000 0.00 0.00 0.00 3.07
2749 3068 1.954146 CAGCACGGCGTGTACAAGT 60.954 57.895 36.68 15.00 35.75 3.16
3259 3611 2.818274 CTGCTCGGCCGTAAACCC 60.818 66.667 27.15 8.62 0.00 4.11
3290 3642 0.671781 CCAGAACCTCAGGACAAGCG 60.672 60.000 0.00 0.00 0.00 4.68
3320 3672 1.098050 CGGGATTTCAGCCTTCTTGG 58.902 55.000 0.00 0.00 39.35 3.61
3321 3673 1.478631 GGGATTTCAGCCTTCTTGGG 58.521 55.000 0.00 0.00 36.00 4.12
3455 3813 5.898174 TGTGGTACTAATTCGTAGTCATGG 58.102 41.667 0.00 0.00 42.37 3.66
3459 3817 5.975939 GGTACTAATTCGTAGTCATGGTCAC 59.024 44.000 0.00 0.00 42.37 3.67
3470 3828 5.283457 AGTCATGGTCACTATTAGCCTTC 57.717 43.478 0.00 0.00 0.00 3.46
3478 3836 6.049790 GGTCACTATTAGCCTTCTCGATTTT 58.950 40.000 0.00 0.00 0.00 1.82
3518 3876 1.229428 CATGTGGCACGATGGGATAC 58.771 55.000 13.77 0.00 0.00 2.24
3549 3907 2.271800 GTCTGTAACCGATTGCTGGAG 58.728 52.381 0.00 0.00 0.00 3.86
3573 3931 0.464870 AGCTGATCAGAATCGCTGCT 59.535 50.000 27.04 11.35 44.52 4.24
3585 3943 1.154525 CGCTGCTTTGTCGCTTCTG 60.155 57.895 0.00 0.00 0.00 3.02
3590 3948 1.493311 CTTTGTCGCTTCTGTCGGC 59.507 57.895 0.00 0.00 0.00 5.54
3606 3964 1.746991 GGCTCCTAGCAACACAGCC 60.747 63.158 0.78 0.00 44.75 4.85
3653 4011 5.632445 CTGCAAGCTCAAACTTTTTCTTC 57.368 39.130 0.00 0.00 0.00 2.87
3682 4040 1.026718 AGGCCAGCTTTGCGTGTATC 61.027 55.000 5.01 0.00 0.00 2.24
3743 4112 5.772004 ACTGAATCTGTGGATACTCCTACT 58.228 41.667 0.00 0.00 37.46 2.57
3744 4113 5.830991 ACTGAATCTGTGGATACTCCTACTC 59.169 44.000 0.00 0.00 37.46 2.59
3745 4114 5.141182 TGAATCTGTGGATACTCCTACTCC 58.859 45.833 0.00 0.00 37.46 3.85
3746 4115 3.596940 TCTGTGGATACTCCTACTCCC 57.403 52.381 0.00 0.00 37.46 4.30
3747 4116 3.132056 TCTGTGGATACTCCTACTCCCT 58.868 50.000 0.00 0.00 37.46 4.20
3748 4117 3.138653 TCTGTGGATACTCCTACTCCCTC 59.861 52.174 0.00 0.00 37.46 4.30
3749 4118 2.177233 TGTGGATACTCCTACTCCCTCC 59.823 54.545 0.00 0.00 37.46 4.30
3750 4119 1.424302 TGGATACTCCTACTCCCTCCG 59.576 57.143 0.00 0.00 37.46 4.63
3751 4120 1.424684 GGATACTCCTACTCCCTCCGT 59.575 57.143 0.00 0.00 32.53 4.69
3752 4121 2.552809 GGATACTCCTACTCCCTCCGTC 60.553 59.091 0.00 0.00 32.53 4.79
3753 4122 0.842635 TACTCCTACTCCCTCCGTCC 59.157 60.000 0.00 0.00 0.00 4.79
3754 4123 1.526455 CTCCTACTCCCTCCGTCCG 60.526 68.421 0.00 0.00 0.00 4.79
3755 4124 1.980784 CTCCTACTCCCTCCGTCCGA 61.981 65.000 0.00 0.00 0.00 4.55
3756 4125 1.077212 CCTACTCCCTCCGTCCGAA 60.077 63.158 0.00 0.00 0.00 4.30
3757 4126 0.682209 CCTACTCCCTCCGTCCGAAA 60.682 60.000 0.00 0.00 0.00 3.46
3758 4127 1.180029 CTACTCCCTCCGTCCGAAAA 58.820 55.000 0.00 0.00 0.00 2.29
3759 4128 1.755380 CTACTCCCTCCGTCCGAAAAT 59.245 52.381 0.00 0.00 0.00 1.82
3760 4129 1.856629 ACTCCCTCCGTCCGAAAATA 58.143 50.000 0.00 0.00 0.00 1.40
3761 4130 1.479730 ACTCCCTCCGTCCGAAAATAC 59.520 52.381 0.00 0.00 0.00 1.89
3762 4131 1.755380 CTCCCTCCGTCCGAAAATACT 59.245 52.381 0.00 0.00 0.00 2.12
3763 4132 2.167900 CTCCCTCCGTCCGAAAATACTT 59.832 50.000 0.00 0.00 0.00 2.24
3764 4133 2.093869 TCCCTCCGTCCGAAAATACTTG 60.094 50.000 0.00 0.00 0.00 3.16
3765 4134 2.354403 CCCTCCGTCCGAAAATACTTGT 60.354 50.000 0.00 0.00 0.00 3.16
3766 4135 2.928116 CCTCCGTCCGAAAATACTTGTC 59.072 50.000 0.00 0.00 0.00 3.18
3767 4136 3.581755 CTCCGTCCGAAAATACTTGTCA 58.418 45.455 0.00 0.00 0.00 3.58
3768 4137 4.181578 CTCCGTCCGAAAATACTTGTCAT 58.818 43.478 0.00 0.00 0.00 3.06
3769 4138 4.178540 TCCGTCCGAAAATACTTGTCATC 58.821 43.478 0.00 0.00 0.00 2.92
3770 4139 3.930229 CCGTCCGAAAATACTTGTCATCA 59.070 43.478 0.00 0.00 0.00 3.07
3771 4140 4.390603 CCGTCCGAAAATACTTGTCATCAA 59.609 41.667 0.00 0.00 0.00 2.57
3772 4141 5.106869 CCGTCCGAAAATACTTGTCATCAAA 60.107 40.000 0.00 0.00 32.87 2.69
3773 4142 6.367421 CGTCCGAAAATACTTGTCATCAAAA 58.633 36.000 0.00 0.00 32.87 2.44
3774 4143 7.021196 CGTCCGAAAATACTTGTCATCAAAAT 58.979 34.615 0.00 0.00 32.87 1.82
3775 4144 7.007367 CGTCCGAAAATACTTGTCATCAAAATG 59.993 37.037 0.00 0.00 32.87 2.32
3776 4145 7.273381 GTCCGAAAATACTTGTCATCAAAATGG 59.727 37.037 0.00 0.00 33.42 3.16
3777 4146 7.175816 TCCGAAAATACTTGTCATCAAAATGGA 59.824 33.333 0.00 0.00 33.42 3.41
3778 4147 7.975616 CCGAAAATACTTGTCATCAAAATGGAT 59.024 33.333 0.00 0.00 33.42 3.41
3786 4155 8.096414 ACTTGTCATCAAAATGGATAAAAAGGG 58.904 33.333 0.00 0.00 33.42 3.95
3787 4156 7.789202 TGTCATCAAAATGGATAAAAAGGGA 57.211 32.000 0.00 0.00 33.42 4.20
3788 4157 8.378115 TGTCATCAAAATGGATAAAAAGGGAT 57.622 30.769 0.00 0.00 33.42 3.85
3789 4158 8.259411 TGTCATCAAAATGGATAAAAAGGGATG 58.741 33.333 0.00 0.00 33.42 3.51
3790 4159 8.260114 GTCATCAAAATGGATAAAAAGGGATGT 58.740 33.333 0.00 0.00 33.42 3.06
3791 4160 9.486123 TCATCAAAATGGATAAAAAGGGATGTA 57.514 29.630 0.00 0.00 33.42 2.29
3794 4163 9.713684 TCAAAATGGATAAAAAGGGATGTATCT 57.286 29.630 0.00 0.00 0.00 1.98
3800 4169 9.225682 TGGATAAAAAGGGATGTATCTAGAACT 57.774 33.333 0.00 0.00 0.00 3.01
3809 4178 9.364653 AGGGATGTATCTAGAACTAAAATACGT 57.635 33.333 0.00 0.00 0.00 3.57
3810 4179 9.623350 GGGATGTATCTAGAACTAAAATACGTC 57.377 37.037 17.13 17.13 37.78 4.34
3855 4224 9.904198 TTCATTTTGATGACAAGTATATCTGGA 57.096 29.630 0.00 0.00 37.32 3.86
3856 4225 9.330063 TCATTTTGATGACAAGTATATCTGGAC 57.670 33.333 0.00 0.00 37.32 4.02
3857 4226 7.770801 TTTTGATGACAAGTATATCTGGACG 57.229 36.000 0.00 0.00 37.32 4.79
3858 4227 5.453567 TGATGACAAGTATATCTGGACGG 57.546 43.478 0.00 0.00 0.00 4.79
3859 4228 5.137551 TGATGACAAGTATATCTGGACGGA 58.862 41.667 0.00 0.00 0.00 4.69
3860 4229 5.241728 TGATGACAAGTATATCTGGACGGAG 59.758 44.000 0.00 0.00 0.00 4.63
3861 4230 3.889538 TGACAAGTATATCTGGACGGAGG 59.110 47.826 0.00 0.00 0.00 4.30
3862 4231 3.231818 ACAAGTATATCTGGACGGAGGG 58.768 50.000 0.00 0.00 0.00 4.30
3863 4232 3.117246 ACAAGTATATCTGGACGGAGGGA 60.117 47.826 0.00 0.00 0.00 4.20
3864 4233 3.443145 AGTATATCTGGACGGAGGGAG 57.557 52.381 0.00 0.00 0.00 4.30
3865 4234 2.717515 AGTATATCTGGACGGAGGGAGT 59.282 50.000 0.00 0.00 0.00 3.85
3866 4235 3.915073 AGTATATCTGGACGGAGGGAGTA 59.085 47.826 0.00 0.00 0.00 2.59
3867 4236 2.653234 TATCTGGACGGAGGGAGTAC 57.347 55.000 0.00 0.00 0.00 2.73
3879 4248 3.055747 GGAGGGAGTACAAAGGAAGACAG 60.056 52.174 0.00 0.00 0.00 3.51
3888 4257 2.447244 AAGGAAGACAGCACGAAGAG 57.553 50.000 0.00 0.00 0.00 2.85
3894 4263 0.238817 GACAGCACGAAGAGACGACT 59.761 55.000 0.00 0.00 37.03 4.18
3923 4295 5.633601 GTCAGTCAGTTTCATGTCGACATTA 59.366 40.000 28.04 18.27 33.61 1.90
3954 4326 0.984230 ATCTCCTCGTTGGCCAAGAA 59.016 50.000 21.21 9.12 35.26 2.52
3978 4494 8.744568 AAAATTCATTCTCTAAGATCACTCCC 57.255 34.615 0.00 0.00 0.00 4.30
3992 4508 6.725364 AGATCACTCCCATGTAATCTTTTGT 58.275 36.000 0.00 0.00 0.00 2.83
4007 4523 5.398603 TCTTTTGTGATGTGTTTGTTGGT 57.601 34.783 0.00 0.00 0.00 3.67
4042 4558 9.872684 AATTGTGGGTTTATGATCAGATTATCT 57.127 29.630 0.09 0.00 0.00 1.98
4092 4608 6.414987 GCCTTCTTTGCTGCGTAATTTTATAG 59.585 38.462 0.00 0.00 0.00 1.31
4093 4609 7.472543 CCTTCTTTGCTGCGTAATTTTATAGT 58.527 34.615 0.00 0.00 0.00 2.12
4152 4669 8.037166 GGCCAAGTTAGATTGATTTTTCTTCAT 58.963 33.333 0.00 0.00 31.55 2.57
4155 4672 9.362539 CAAGTTAGATTGATTTTTCTTCATGGG 57.637 33.333 0.00 0.00 31.55 4.00
4157 4674 8.964772 AGTTAGATTGATTTTTCTTCATGGGAG 58.035 33.333 0.00 0.00 0.00 4.30
4158 4675 8.743714 GTTAGATTGATTTTTCTTCATGGGAGT 58.256 33.333 0.00 0.00 0.00 3.85
4174 4691 2.565834 GGGAGTAGTGCTTTGTGGTAGA 59.434 50.000 0.00 0.00 0.00 2.59
4200 4717 0.321564 TTTGCGGTGATCCTGTCCAG 60.322 55.000 0.00 0.00 0.00 3.86
4201 4718 2.512515 GCGGTGATCCTGTCCAGC 60.513 66.667 0.00 0.00 0.00 4.85
4221 4739 1.017387 GCAGAAAGGATAAGGGCACG 58.983 55.000 0.00 0.00 0.00 5.34
4238 4756 4.274950 GGGCACGTATTGTATTGTTGCTAT 59.725 41.667 0.00 0.00 0.00 2.97
4242 4760 7.911205 GGCACGTATTGTATTGTTGCTATTAAA 59.089 33.333 0.00 0.00 0.00 1.52
4243 4761 9.279904 GCACGTATTGTATTGTTGCTATTAAAA 57.720 29.630 0.00 0.00 0.00 1.52
Position MSA Position Penalty Sequence TM GC Self any TH Self end TH Hairpin End Stability
0 1 4.884164 AGGAATGACTAGCCAAATTACAGC 59.116 41.667 0.00 0.00 0.00 4.40
1 2 6.183360 CCAAGGAATGACTAGCCAAATTACAG 60.183 42.308 0.00 0.00 0.00 2.74
4 5 4.644685 GCCAAGGAATGACTAGCCAAATTA 59.355 41.667 0.00 0.00 0.00 1.40
5 6 3.448660 GCCAAGGAATGACTAGCCAAATT 59.551 43.478 0.00 0.00 0.00 1.82
7 8 2.041620 AGCCAAGGAATGACTAGCCAAA 59.958 45.455 0.00 0.00 0.00 3.28
8 9 1.635487 AGCCAAGGAATGACTAGCCAA 59.365 47.619 0.00 0.00 0.00 4.52
9 10 1.289160 AGCCAAGGAATGACTAGCCA 58.711 50.000 0.00 0.00 0.00 4.75
10 11 3.560636 TTAGCCAAGGAATGACTAGCC 57.439 47.619 0.00 0.00 0.00 3.93
11 12 6.268566 CAAAATTAGCCAAGGAATGACTAGC 58.731 40.000 0.00 0.00 0.00 3.42
12 13 6.603201 TCCAAAATTAGCCAAGGAATGACTAG 59.397 38.462 0.00 0.00 0.00 2.57
13 14 6.489603 TCCAAAATTAGCCAAGGAATGACTA 58.510 36.000 0.00 0.00 0.00 2.59
14 15 5.332743 TCCAAAATTAGCCAAGGAATGACT 58.667 37.500 0.00 0.00 0.00 3.41
15 16 5.659440 TCCAAAATTAGCCAAGGAATGAC 57.341 39.130 0.00 0.00 0.00 3.06
17 18 6.284891 TCTTCCAAAATTAGCCAAGGAATG 57.715 37.500 0.00 0.00 34.90 2.67
18 19 6.269769 TGTTCTTCCAAAATTAGCCAAGGAAT 59.730 34.615 0.00 0.00 34.90 3.01
19 20 5.600484 TGTTCTTCCAAAATTAGCCAAGGAA 59.400 36.000 0.00 0.00 34.30 3.36
20 21 5.010617 GTGTTCTTCCAAAATTAGCCAAGGA 59.989 40.000 0.00 0.00 0.00 3.36
22 23 5.841810 TGTGTTCTTCCAAAATTAGCCAAG 58.158 37.500 0.00 0.00 0.00 3.61
23 24 5.860941 TGTGTTCTTCCAAAATTAGCCAA 57.139 34.783 0.00 0.00 0.00 4.52
24 25 5.127845 TGTTGTGTTCTTCCAAAATTAGCCA 59.872 36.000 0.00 0.00 0.00 4.75
25 26 5.462068 GTGTTGTGTTCTTCCAAAATTAGCC 59.538 40.000 0.00 0.00 0.00 3.93
26 27 5.462068 GGTGTTGTGTTCTTCCAAAATTAGC 59.538 40.000 0.00 0.00 0.00 3.09
27 28 5.685511 CGGTGTTGTGTTCTTCCAAAATTAG 59.314 40.000 0.00 0.00 0.00 1.73
28 29 5.357314 TCGGTGTTGTGTTCTTCCAAAATTA 59.643 36.000 0.00 0.00 0.00 1.40
32 33 2.712709 TCGGTGTTGTGTTCTTCCAAA 58.287 42.857 0.00 0.00 0.00 3.28
33 34 2.404923 TCGGTGTTGTGTTCTTCCAA 57.595 45.000 0.00 0.00 0.00 3.53
34 35 2.011222 GTTCGGTGTTGTGTTCTTCCA 58.989 47.619 0.00 0.00 0.00 3.53
35 36 1.004292 CGTTCGGTGTTGTGTTCTTCC 60.004 52.381 0.00 0.00 0.00 3.46
37 38 1.011333 CCGTTCGGTGTTGTGTTCTT 58.989 50.000 2.82 0.00 0.00 2.52
39 40 2.386272 ACCGTTCGGTGTTGTGTTC 58.614 52.632 16.22 0.00 37.10 3.18
48 49 2.897172 AAGCCAAACCACCGTTCGGT 62.897 55.000 11.27 11.27 38.85 4.69
49 50 2.190841 AAGCCAAACCACCGTTCGG 61.191 57.895 9.81 9.81 0.00 4.30
50 51 1.008995 CAAGCCAAACCACCGTTCG 60.009 57.895 0.00 0.00 0.00 3.95
51 52 1.362355 CCAAGCCAAACCACCGTTC 59.638 57.895 0.00 0.00 0.00 3.95
52 53 2.791868 GCCAAGCCAAACCACCGTT 61.792 57.895 0.00 0.00 0.00 4.44
53 54 3.223589 GCCAAGCCAAACCACCGT 61.224 61.111 0.00 0.00 0.00 4.83
54 55 2.912025 AGCCAAGCCAAACCACCG 60.912 61.111 0.00 0.00 0.00 4.94
55 56 1.531602 AGAGCCAAGCCAAACCACC 60.532 57.895 0.00 0.00 0.00 4.61
56 57 1.662044 CAGAGCCAAGCCAAACCAC 59.338 57.895 0.00 0.00 0.00 4.16
59 60 1.527433 GGACCAGAGCCAAGCCAAAC 61.527 60.000 0.00 0.00 0.00 2.93
61 62 2.436109 GGACCAGAGCCAAGCCAA 59.564 61.111 0.00 0.00 0.00 4.52
62 63 4.020617 CGGACCAGAGCCAAGCCA 62.021 66.667 0.00 0.00 0.00 4.75
63 64 4.785453 CCGGACCAGAGCCAAGCC 62.785 72.222 0.00 0.00 0.00 4.35
65 66 1.078848 CTTCCGGACCAGAGCCAAG 60.079 63.158 1.83 0.00 0.00 3.61
67 68 0.970937 CTACTTCCGGACCAGAGCCA 60.971 60.000 1.83 0.00 0.00 4.75
69 70 0.173708 CACTACTTCCGGACCAGAGC 59.826 60.000 1.83 0.00 0.00 4.09
70 71 1.202582 CACACTACTTCCGGACCAGAG 59.797 57.143 1.83 0.16 0.00 3.35
71 72 1.202964 TCACACTACTTCCGGACCAGA 60.203 52.381 1.83 0.00 0.00 3.86
72 73 1.202582 CTCACACTACTTCCGGACCAG 59.797 57.143 1.83 1.57 0.00 4.00
73 74 1.202964 TCTCACACTACTTCCGGACCA 60.203 52.381 1.83 0.00 0.00 4.02
74 75 1.542492 TCTCACACTACTTCCGGACC 58.458 55.000 1.83 0.00 0.00 4.46
75 76 5.163540 ACAATATCTCACACTACTTCCGGAC 60.164 44.000 1.83 0.00 0.00 4.79
76 77 4.954202 ACAATATCTCACACTACTTCCGGA 59.046 41.667 0.00 0.00 0.00 5.14
77 78 5.263968 ACAATATCTCACACTACTTCCGG 57.736 43.478 0.00 0.00 0.00 5.14
78 79 7.260558 TCTACAATATCTCACACTACTTCCG 57.739 40.000 0.00 0.00 0.00 4.30
79 80 7.644551 CGTTCTACAATATCTCACACTACTTCC 59.355 40.741 0.00 0.00 0.00 3.46
80 81 8.396390 TCGTTCTACAATATCTCACACTACTTC 58.604 37.037 0.00 0.00 0.00 3.01
81 82 8.277490 TCGTTCTACAATATCTCACACTACTT 57.723 34.615 0.00 0.00 0.00 2.24
82 83 7.769507 TCTCGTTCTACAATATCTCACACTACT 59.230 37.037 0.00 0.00 0.00 2.57
84 85 8.502105 TTCTCGTTCTACAATATCTCACACTA 57.498 34.615 0.00 0.00 0.00 2.74
85 86 7.392494 TTCTCGTTCTACAATATCTCACACT 57.608 36.000 0.00 0.00 0.00 3.55
87 88 7.772166 ACATTCTCGTTCTACAATATCTCACA 58.228 34.615 0.00 0.00 0.00 3.58
88 89 9.731819 TTACATTCTCGTTCTACAATATCTCAC 57.268 33.333 0.00 0.00 0.00 3.51
91 92 9.915629 GGATTACATTCTCGTTCTACAATATCT 57.084 33.333 0.00 0.00 0.00 1.98
92 93 9.915629 AGGATTACATTCTCGTTCTACAATATC 57.084 33.333 0.00 0.00 0.00 1.63
93 94 9.698309 CAGGATTACATTCTCGTTCTACAATAT 57.302 33.333 0.00 0.00 0.00 1.28
94 95 8.692710 ACAGGATTACATTCTCGTTCTACAATA 58.307 33.333 0.00 0.00 0.00 1.90
95 96 7.556844 ACAGGATTACATTCTCGTTCTACAAT 58.443 34.615 0.00 0.00 0.00 2.71
96 97 6.931838 ACAGGATTACATTCTCGTTCTACAA 58.068 36.000 0.00 0.00 0.00 2.41
98 99 8.805688 GTTTACAGGATTACATTCTCGTTCTAC 58.194 37.037 0.00 0.00 0.00 2.59
100 101 7.545965 CAGTTTACAGGATTACATTCTCGTTCT 59.454 37.037 0.00 0.00 0.00 3.01
101 102 7.331193 ACAGTTTACAGGATTACATTCTCGTTC 59.669 37.037 0.00 0.00 0.00 3.95
102 103 7.117812 CACAGTTTACAGGATTACATTCTCGTT 59.882 37.037 0.00 0.00 0.00 3.85
103 104 6.590292 CACAGTTTACAGGATTACATTCTCGT 59.410 38.462 0.00 0.00 0.00 4.18
104 105 6.455646 GCACAGTTTACAGGATTACATTCTCG 60.456 42.308 0.00 0.00 0.00 4.04
105 106 6.595716 AGCACAGTTTACAGGATTACATTCTC 59.404 38.462 0.00 0.00 0.00 2.87
106 107 6.372659 CAGCACAGTTTACAGGATTACATTCT 59.627 38.462 0.00 0.00 0.00 2.40
109 110 5.804639 TCAGCACAGTTTACAGGATTACAT 58.195 37.500 0.00 0.00 0.00 2.29
110 111 5.221641 ACTCAGCACAGTTTACAGGATTACA 60.222 40.000 0.00 0.00 0.00 2.41
111 112 5.238583 ACTCAGCACAGTTTACAGGATTAC 58.761 41.667 0.00 0.00 0.00 1.89
114 115 5.483685 TTACTCAGCACAGTTTACAGGAT 57.516 39.130 0.00 0.00 0.00 3.24
116 117 4.142816 GCATTACTCAGCACAGTTTACAGG 60.143 45.833 0.00 0.00 0.00 4.00
117 118 4.452114 TGCATTACTCAGCACAGTTTACAG 59.548 41.667 0.00 0.00 35.51 2.74
118 119 4.384940 TGCATTACTCAGCACAGTTTACA 58.615 39.130 0.00 0.00 35.51 2.41
120 121 5.063204 ACTTGCATTACTCAGCACAGTTTA 58.937 37.500 0.00 0.00 41.05 2.01
123 124 3.131709 ACTTGCATTACTCAGCACAGT 57.868 42.857 0.00 0.00 41.05 3.55
124 125 3.750130 AGAACTTGCATTACTCAGCACAG 59.250 43.478 0.00 0.00 41.05 3.66
125 126 3.743521 AGAACTTGCATTACTCAGCACA 58.256 40.909 0.00 0.00 41.05 4.57
126 127 4.756084 AAGAACTTGCATTACTCAGCAC 57.244 40.909 0.00 0.00 41.05 4.40
128 129 5.523369 ACAAAAGAACTTGCATTACTCAGC 58.477 37.500 0.00 0.00 0.00 4.26
129 130 6.638468 GGAACAAAAGAACTTGCATTACTCAG 59.362 38.462 0.00 0.00 0.00 3.35
131 132 5.625311 CGGAACAAAAGAACTTGCATTACTC 59.375 40.000 0.00 0.00 0.00 2.59
132 133 5.519722 CGGAACAAAAGAACTTGCATTACT 58.480 37.500 0.00 0.00 0.00 2.24
134 135 4.202060 TGCGGAACAAAAGAACTTGCATTA 60.202 37.500 0.00 0.00 0.00 1.90
135 136 3.123050 GCGGAACAAAAGAACTTGCATT 58.877 40.909 0.00 0.00 0.00 3.56
136 137 2.100584 TGCGGAACAAAAGAACTTGCAT 59.899 40.909 0.00 0.00 0.00 3.96
138 139 2.202295 TGCGGAACAAAAGAACTTGC 57.798 45.000 0.00 0.00 0.00 4.01
162 163 2.166254 GGATCATGCGGTGTGGATTTTT 59.834 45.455 0.00 0.00 0.00 1.94
163 164 1.750778 GGATCATGCGGTGTGGATTTT 59.249 47.619 0.00 0.00 0.00 1.82
164 165 1.392589 GGATCATGCGGTGTGGATTT 58.607 50.000 0.00 0.00 0.00 2.17
165 166 0.815213 CGGATCATGCGGTGTGGATT 60.815 55.000 0.00 0.00 0.00 3.01
166 167 1.227645 CGGATCATGCGGTGTGGAT 60.228 57.895 0.00 0.00 0.00 3.41
169 170 0.650512 GTAACGGATCATGCGGTGTG 59.349 55.000 0.00 0.00 34.75 3.82
170 171 0.461339 GGTAACGGATCATGCGGTGT 60.461 55.000 0.00 0.00 34.75 4.16
172 173 1.405872 TAGGTAACGGATCATGCGGT 58.594 50.000 2.75 0.00 46.39 5.68
173 174 2.743636 ATAGGTAACGGATCATGCGG 57.256 50.000 2.75 0.00 46.39 5.69
175 176 7.387948 AGAAAACATATAGGTAACGGATCATGC 59.612 37.037 0.00 0.00 46.39 4.06
176 177 8.833231 AGAAAACATATAGGTAACGGATCATG 57.167 34.615 0.00 0.00 46.39 3.07
178 179 7.070198 TGGAGAAAACATATAGGTAACGGATCA 59.930 37.037 0.00 0.00 46.39 2.92
179 180 7.439381 TGGAGAAAACATATAGGTAACGGATC 58.561 38.462 0.00 0.00 46.39 3.36
181 182 6.795144 TGGAGAAAACATATAGGTAACGGA 57.205 37.500 0.00 0.00 46.39 4.69
182 183 7.713507 TGATTGGAGAAAACATATAGGTAACGG 59.286 37.037 0.00 0.00 46.39 4.44
183 184 8.657074 TGATTGGAGAAAACATATAGGTAACG 57.343 34.615 0.00 0.00 46.39 3.18
187 188 9.347240 CTTGATGATTGGAGAAAACATATAGGT 57.653 33.333 0.00 0.00 0.00 3.08
189 190 9.347240 ACCTTGATGATTGGAGAAAACATATAG 57.653 33.333 0.00 0.00 0.00 1.31
191 192 8.472413 CAACCTTGATGATTGGAGAAAACATAT 58.528 33.333 0.00 0.00 0.00 1.78
192 193 7.093814 CCAACCTTGATGATTGGAGAAAACATA 60.094 37.037 0.00 0.00 44.84 2.29
193 194 6.295462 CCAACCTTGATGATTGGAGAAAACAT 60.295 38.462 0.00 0.00 44.84 2.71
194 195 5.010922 CCAACCTTGATGATTGGAGAAAACA 59.989 40.000 0.00 0.00 44.84 2.83
195 196 5.473039 CCAACCTTGATGATTGGAGAAAAC 58.527 41.667 0.00 0.00 44.84 2.43
196 197 4.527816 CCCAACCTTGATGATTGGAGAAAA 59.472 41.667 3.80 0.00 44.84 2.29
198 199 3.564133 CCCCAACCTTGATGATTGGAGAA 60.564 47.826 3.80 0.00 44.84 2.87
200 201 2.025037 TCCCCAACCTTGATGATTGGAG 60.025 50.000 3.80 0.00 44.84 3.86
201 202 1.999295 TCCCCAACCTTGATGATTGGA 59.001 47.619 3.80 0.00 44.84 3.53
202 203 2.530460 TCCCCAACCTTGATGATTGG 57.470 50.000 0.00 0.00 42.21 3.16
203 204 4.888326 TTTTCCCCAACCTTGATGATTG 57.112 40.909 0.00 0.00 0.00 2.67
204 205 6.240145 CAAATTTTCCCCAACCTTGATGATT 58.760 36.000 0.00 0.00 0.00 2.57
205 206 5.280624 CCAAATTTTCCCCAACCTTGATGAT 60.281 40.000 0.00 0.00 0.00 2.45
206 207 4.041444 CCAAATTTTCCCCAACCTTGATGA 59.959 41.667 0.00 0.00 0.00 2.92
207 208 4.202451 ACCAAATTTTCCCCAACCTTGATG 60.202 41.667 0.00 0.00 0.00 3.07
208 209 3.980022 ACCAAATTTTCCCCAACCTTGAT 59.020 39.130 0.00 0.00 0.00 2.57
209 210 3.135530 CACCAAATTTTCCCCAACCTTGA 59.864 43.478 0.00 0.00 0.00 3.02
210 211 3.475575 CACCAAATTTTCCCCAACCTTG 58.524 45.455 0.00 0.00 0.00 3.61
211 212 2.158682 GCACCAAATTTTCCCCAACCTT 60.159 45.455 0.00 0.00 0.00 3.50
213 214 1.141858 TGCACCAAATTTTCCCCAACC 59.858 47.619 0.00 0.00 0.00 3.77
214 215 2.217750 GTGCACCAAATTTTCCCCAAC 58.782 47.619 5.22 0.00 0.00 3.77
215 216 1.141858 GGTGCACCAAATTTTCCCCAA 59.858 47.619 31.23 0.00 35.64 4.12
216 217 0.761802 GGTGCACCAAATTTTCCCCA 59.238 50.000 31.23 0.00 35.64 4.96
217 218 0.320334 CGGTGCACCAAATTTTCCCC 60.320 55.000 34.16 3.99 35.14 4.81
218 219 0.320334 CCGGTGCACCAAATTTTCCC 60.320 55.000 34.16 4.55 35.14 3.97
219 220 0.391228 ACCGGTGCACCAAATTTTCC 59.609 50.000 34.16 5.35 35.14 3.13
220 221 1.496934 CACCGGTGCACCAAATTTTC 58.503 50.000 34.16 6.04 35.14 2.29
233 234 2.813726 TAGCACCACAAGCACCGGT 61.814 57.895 0.00 0.00 0.00 5.28
234 235 2.031919 TAGCACCACAAGCACCGG 59.968 61.111 0.00 0.00 0.00 5.28
235 236 2.325082 GGTAGCACCACAAGCACCG 61.325 63.158 1.01 0.00 38.42 4.94
238 239 0.534877 CACTGGTAGCACCACAAGCA 60.535 55.000 4.16 0.00 44.79 3.91
240 241 0.534877 TGCACTGGTAGCACCACAAG 60.535 55.000 4.16 0.00 44.79 3.16
241 242 1.529309 TGCACTGGTAGCACCACAA 59.471 52.632 4.16 0.00 44.79 3.33
247 248 2.920384 TCCGGTGCACTGGTAGCA 60.920 61.111 37.57 20.58 43.01 3.49
248 249 2.434359 GTCCGGTGCACTGGTAGC 60.434 66.667 37.57 26.07 43.01 3.58
249 250 2.227089 GAGGTCCGGTGCACTGGTAG 62.227 65.000 37.57 17.88 43.01 3.18
251 252 3.626924 GAGGTCCGGTGCACTGGT 61.627 66.667 37.57 23.32 43.01 4.00
252 253 4.394712 GGAGGTCCGGTGCACTGG 62.395 72.222 35.06 35.06 43.86 4.00
262 263 5.240121 TCTTAAAATGTGTTACGGAGGTCC 58.760 41.667 0.00 0.00 0.00 4.46
263 264 6.370718 ACATCTTAAAATGTGTTACGGAGGTC 59.629 38.462 0.00 0.00 38.43 3.85
264 265 6.235664 ACATCTTAAAATGTGTTACGGAGGT 58.764 36.000 0.00 0.00 38.43 3.85
265 266 6.737254 ACATCTTAAAATGTGTTACGGAGG 57.263 37.500 0.00 0.00 38.43 4.30
303 304 6.335471 TGACACATGAATGAGCTCATTTTT 57.665 33.333 35.91 25.12 45.72 1.94
304 305 5.970317 TGACACATGAATGAGCTCATTTT 57.030 34.783 35.91 25.43 45.72 1.82
307 308 4.777463 TGATGACACATGAATGAGCTCAT 58.223 39.130 23.75 23.75 36.45 2.90
308 309 4.210724 TGATGACACATGAATGAGCTCA 57.789 40.909 20.79 20.79 0.00 4.26
309 310 5.066117 ACATTGATGACACATGAATGAGCTC 59.934 40.000 22.82 6.82 0.00 4.09
310 311 4.948004 ACATTGATGACACATGAATGAGCT 59.052 37.500 22.82 0.00 0.00 4.09
312 313 7.088272 ACAAACATTGATGACACATGAATGAG 58.912 34.615 22.82 16.09 0.00 2.90
317 318 6.146601 ACAACAAACATTGATGACACATGA 57.853 33.333 0.00 0.00 36.97 3.07
323 324 5.687285 GTCCTTGACAACAAACATTGATGAC 59.313 40.000 7.26 2.46 36.97 3.06
324 325 5.359292 TGTCCTTGACAACAAACATTGATGA 59.641 36.000 7.26 0.00 39.78 2.92
325 326 5.590145 TGTCCTTGACAACAAACATTGATG 58.410 37.500 0.00 0.00 39.78 3.07
326 327 5.850557 TGTCCTTGACAACAAACATTGAT 57.149 34.783 0.00 0.00 39.78 2.57
327 328 5.850557 ATGTCCTTGACAACAAACATTGA 57.149 34.783 0.46 0.00 45.96 2.57
328 329 6.638063 CACTATGTCCTTGACAACAAACATTG 59.362 38.462 0.46 9.84 45.96 2.82
329 330 6.239008 CCACTATGTCCTTGACAACAAACATT 60.239 38.462 0.46 0.00 45.96 2.71
330 331 5.241506 CCACTATGTCCTTGACAACAAACAT 59.758 40.000 0.46 9.21 45.96 2.71
331 332 4.578516 CCACTATGTCCTTGACAACAAACA 59.421 41.667 0.46 0.00 45.96 2.83
332 333 4.578928 ACCACTATGTCCTTGACAACAAAC 59.421 41.667 0.46 0.00 45.96 2.93
334 335 4.133820 CACCACTATGTCCTTGACAACAA 58.866 43.478 0.46 0.00 45.96 2.83
335 336 3.135712 ACACCACTATGTCCTTGACAACA 59.864 43.478 0.46 0.00 45.96 3.33
336 337 3.740115 ACACCACTATGTCCTTGACAAC 58.260 45.455 0.46 0.00 45.96 3.32
337 338 4.431416 AACACCACTATGTCCTTGACAA 57.569 40.909 0.46 0.00 45.96 3.18
340 341 3.650942 AGGAAACACCACTATGTCCTTGA 59.349 43.478 0.00 0.00 42.04 3.02
341 342 4.021102 AGGAAACACCACTATGTCCTTG 57.979 45.455 0.00 0.00 42.04 3.61
342 343 4.398319 CAAGGAAACACCACTATGTCCTT 58.602 43.478 0.00 0.00 37.31 3.36
344 345 2.488153 GCAAGGAAACACCACTATGTCC 59.512 50.000 0.00 0.00 42.04 4.02
345 346 3.146066 TGCAAGGAAACACCACTATGTC 58.854 45.455 0.00 0.00 42.04 3.06
346 347 3.149196 CTGCAAGGAAACACCACTATGT 58.851 45.455 0.00 0.00 42.04 2.29
348 349 3.412386 GTCTGCAAGGAAACACCACTAT 58.588 45.455 0.00 0.00 42.04 2.12
350 351 1.680338 GTCTGCAAGGAAACACCACT 58.320 50.000 0.00 0.00 42.04 4.00
360 361 2.359975 GAACCCCGGTCTGCAAGG 60.360 66.667 0.00 0.00 0.00 3.61
386 387 4.065281 ACGGAAACTCGCTCCCGG 62.065 66.667 0.00 0.00 45.63 5.73
390 391 0.733223 GAGACCACGGAAACTCGCTC 60.733 60.000 0.00 0.00 0.00 5.03
393 394 0.666577 GGTGAGACCACGGAAACTCG 60.667 60.000 0.00 0.00 44.09 4.18
447 448 2.279517 GATCCGTGGGCACTAGCG 60.280 66.667 0.00 0.00 43.41 4.26
477 478 7.278868 ACCTCGTGCAATGTTTAAAATTTTTCA 59.721 29.630 9.06 7.10 0.00 2.69
479 480 7.546778 ACCTCGTGCAATGTTTAAAATTTTT 57.453 28.000 9.06 0.00 0.00 1.94
539 540 6.377146 GGTCAAATCTAAAGCCCAACTTATGA 59.623 38.462 0.00 0.00 37.75 2.15
545 546 3.161866 TGGGTCAAATCTAAAGCCCAAC 58.838 45.455 0.00 0.00 42.52 3.77
943 949 3.279116 GCGCTTGTGGTGCTGTGA 61.279 61.111 0.00 0.00 46.82 3.58
1221 1262 1.626654 CGACCACCGTGATGTTGCTC 61.627 60.000 0.00 0.00 0.00 4.26
1337 1381 2.226912 CGGCGTTGAAAAGGAATGGTAA 59.773 45.455 0.00 0.00 32.44 2.85
1346 1391 2.480419 AGATCAAGACGGCGTTGAAAAG 59.520 45.455 16.19 1.62 37.46 2.27
1385 1430 1.045407 AGAGCAAACTACACCACGGA 58.955 50.000 0.00 0.00 0.00 4.69
1386 1431 1.148310 CAGAGCAAACTACACCACGG 58.852 55.000 0.00 0.00 0.00 4.94
1393 1438 1.461127 CTGCGTTCCAGAGCAAACTAC 59.539 52.381 0.00 0.00 44.64 2.73
1433 1478 1.128692 GTCAATGTAGAAGTGCACGCC 59.871 52.381 12.01 7.32 0.00 5.68
1438 1488 2.675348 GAGCCAGTCAATGTAGAAGTGC 59.325 50.000 0.00 0.00 0.00 4.40
1444 1494 1.209019 AGCAGGAGCCAGTCAATGTAG 59.791 52.381 0.00 0.00 43.56 2.74
1450 1500 1.601759 GCAAAGCAGGAGCCAGTCA 60.602 57.895 0.00 0.00 43.56 3.41
1451 1501 1.303155 AGCAAAGCAGGAGCCAGTC 60.303 57.895 0.00 0.00 43.56 3.51
1474 1529 3.479489 TGACAAATCTGCTGCAGAAGAA 58.521 40.909 33.31 13.60 44.04 2.52
1475 1530 3.130280 TGACAAATCTGCTGCAGAAGA 57.870 42.857 33.31 26.87 44.04 2.87
1476 1531 3.909776 TTGACAAATCTGCTGCAGAAG 57.090 42.857 33.31 26.22 44.04 2.85
1505 1560 1.442769 TTGAGCAAGAGATTCGCACC 58.557 50.000 0.00 0.00 0.00 5.01
1538 1593 5.462530 AAAGGGTACAACAAATAGGCAAC 57.537 39.130 0.00 0.00 0.00 4.17
1574 1629 7.014230 GCCTACTTATCAATTCCCAGCAAATTA 59.986 37.037 0.00 0.00 0.00 1.40
1580 1635 2.808543 CGCCTACTTATCAATTCCCAGC 59.191 50.000 0.00 0.00 0.00 4.85
1615 1670 3.799420 GTGAAAAATGCACTTTTACGCCA 59.201 39.130 5.76 0.00 36.01 5.69
1687 1742 6.983307 GTGTGCTCAATATCTACTCAGTTCAT 59.017 38.462 0.00 0.00 0.00 2.57
1697 1752 7.065803 GCAGGTTAAAAGTGTGCTCAATATCTA 59.934 37.037 0.00 0.00 0.00 1.98
1701 1756 4.824537 TGCAGGTTAAAAGTGTGCTCAATA 59.175 37.500 0.00 0.00 35.11 1.90
1710 1765 7.589954 GTGTAAGTACAATGCAGGTTAAAAGTG 59.410 37.037 0.00 0.00 38.04 3.16
1732 1787 5.072741 ACTACTTCCTCCAGTAAACGTGTA 58.927 41.667 0.00 0.00 0.00 2.90
1743 1798 2.303022 CAGCCAAGAACTACTTCCTCCA 59.697 50.000 0.00 0.00 36.61 3.86
1784 1839 6.207810 ACTTGATTCGCAACCCTTGTAATTAA 59.792 34.615 0.00 0.00 31.96 1.40
1796 1851 0.310543 TGTGCCACTTGATTCGCAAC 59.689 50.000 0.00 0.00 32.04 4.17
1797 1852 1.068402 CATGTGCCACTTGATTCGCAA 60.068 47.619 4.81 0.00 32.04 4.85
1801 1856 2.094390 ACATGCATGTGCCACTTGATTC 60.094 45.455 30.92 0.00 40.03 2.52
1803 1858 1.475280 GACATGCATGTGCCACTTGAT 59.525 47.619 35.92 8.00 41.95 2.57
1806 1861 0.599558 GTGACATGCATGTGCCACTT 59.400 50.000 35.92 10.43 41.95 3.16
1811 1866 2.151881 TTTTGGTGACATGCATGTGC 57.848 45.000 35.92 25.54 41.95 4.57
1820 1875 5.242838 GGACCTATGAACATTTTTGGTGACA 59.757 40.000 0.00 0.00 39.83 3.58
1821 1876 5.336451 GGGACCTATGAACATTTTTGGTGAC 60.336 44.000 0.00 0.00 0.00 3.67
1822 1877 4.770010 GGGACCTATGAACATTTTTGGTGA 59.230 41.667 0.00 0.00 0.00 4.02
1823 1878 5.072040 GGGACCTATGAACATTTTTGGTG 57.928 43.478 0.00 0.00 0.00 4.17
1843 1898 6.664428 AATTTATCCCGAAATACAATGGGG 57.336 37.500 0.00 0.00 42.20 4.96
1844 1899 8.200792 TCAAAATTTATCCCGAAATACAATGGG 58.799 33.333 0.00 0.00 43.36 4.00
1845 1900 9.030301 GTCAAAATTTATCCCGAAATACAATGG 57.970 33.333 0.00 0.00 0.00 3.16
1846 1901 9.030301 GGTCAAAATTTATCCCGAAATACAATG 57.970 33.333 0.00 0.00 0.00 2.82
1847 1902 8.754080 TGGTCAAAATTTATCCCGAAATACAAT 58.246 29.630 0.00 0.00 0.00 2.71
1848 1903 8.123639 TGGTCAAAATTTATCCCGAAATACAA 57.876 30.769 0.00 0.00 0.00 2.41
1850 1905 9.893305 CTATGGTCAAAATTTATCCCGAAATAC 57.107 33.333 0.00 0.00 0.00 1.89
1851 1906 9.854668 TCTATGGTCAAAATTTATCCCGAAATA 57.145 29.630 0.00 0.00 0.00 1.40
1854 1909 8.629158 CAATCTATGGTCAAAATTTATCCCGAA 58.371 33.333 0.00 0.00 0.00 4.30
1856 1911 8.165239 TCAATCTATGGTCAAAATTTATCCCG 57.835 34.615 0.00 0.00 0.00 5.14
1857 1912 9.750125 GTTCAATCTATGGTCAAAATTTATCCC 57.250 33.333 0.00 0.00 0.00 3.85
1922 1977 9.834628 GGATTCGTATTTGAACATACTTTTCAA 57.165 29.630 0.00 0.00 40.42 2.69
1925 1980 9.620660 GTTGGATTCGTATTTGAACATACTTTT 57.379 29.630 0.00 0.00 0.00 2.27
1926 1981 7.960738 CGTTGGATTCGTATTTGAACATACTTT 59.039 33.333 0.00 0.00 0.00 2.66
1927 1982 7.332430 TCGTTGGATTCGTATTTGAACATACTT 59.668 33.333 0.00 0.00 0.00 2.24
1928 1983 6.814644 TCGTTGGATTCGTATTTGAACATACT 59.185 34.615 0.00 0.00 0.00 2.12
1929 1984 6.898189 GTCGTTGGATTCGTATTTGAACATAC 59.102 38.462 0.00 0.00 0.00 2.39
1931 1986 5.410132 TGTCGTTGGATTCGTATTTGAACAT 59.590 36.000 0.00 0.00 0.00 2.71
1932 1987 4.750598 TGTCGTTGGATTCGTATTTGAACA 59.249 37.500 0.00 0.00 0.00 3.18
1933 1988 5.272167 TGTCGTTGGATTCGTATTTGAAC 57.728 39.130 0.00 0.00 0.00 3.18
1934 1989 5.672570 GCATGTCGTTGGATTCGTATTTGAA 60.673 40.000 0.00 0.00 0.00 2.69
1935 1990 4.201773 GCATGTCGTTGGATTCGTATTTGA 60.202 41.667 0.00 0.00 0.00 2.69
1937 1992 3.687212 TGCATGTCGTTGGATTCGTATTT 59.313 39.130 0.00 0.00 0.00 1.40
1939 1994 2.899976 TGCATGTCGTTGGATTCGTAT 58.100 42.857 0.00 0.00 0.00 3.06
1940 1995 2.371910 TGCATGTCGTTGGATTCGTA 57.628 45.000 0.00 0.00 0.00 3.43
1941 1996 1.737838 ATGCATGTCGTTGGATTCGT 58.262 45.000 0.00 0.00 0.00 3.85
1942 1997 2.830772 AATGCATGTCGTTGGATTCG 57.169 45.000 0.00 0.00 32.95 3.34
1943 1998 4.980590 TGTTAATGCATGTCGTTGGATTC 58.019 39.130 0.00 0.00 38.43 2.52
1944 1999 5.581126 ATGTTAATGCATGTCGTTGGATT 57.419 34.783 0.00 7.39 40.28 3.01
1945 2000 5.581126 AATGTTAATGCATGTCGTTGGAT 57.419 34.783 0.00 0.00 0.00 3.41
1946 2001 5.384063 AAATGTTAATGCATGTCGTTGGA 57.616 34.783 0.00 0.00 0.00 3.53
1947 2002 5.404968 ACAAAATGTTAATGCATGTCGTTGG 59.595 36.000 0.00 1.67 0.00 3.77
1948 2003 6.450845 ACAAAATGTTAATGCATGTCGTTG 57.549 33.333 0.00 1.80 0.00 4.10
1951 2006 7.795431 ACTAACAAAATGTTAATGCATGTCG 57.205 32.000 0.00 0.00 41.70 4.35
1987 2042 8.364142 CCCCTTATAGTTTGTGTCAAAATTTGA 58.636 33.333 4.03 4.03 37.33 2.69
1989 2044 8.364894 GTCCCCTTATAGTTTGTGTCAAAATTT 58.635 33.333 0.91 0.00 0.00 1.82
1990 2045 7.039293 GGTCCCCTTATAGTTTGTGTCAAAATT 60.039 37.037 0.91 0.00 0.00 1.82
1991 2046 6.436218 GGTCCCCTTATAGTTTGTGTCAAAAT 59.564 38.462 1.27 1.27 0.00 1.82
1992 2047 5.771165 GGTCCCCTTATAGTTTGTGTCAAAA 59.229 40.000 0.00 0.00 0.00 2.44
1993 2048 5.073965 AGGTCCCCTTATAGTTTGTGTCAAA 59.926 40.000 0.00 0.00 0.00 2.69
1994 2049 4.600111 AGGTCCCCTTATAGTTTGTGTCAA 59.400 41.667 0.00 0.00 0.00 3.18
1995 2050 4.172807 AGGTCCCCTTATAGTTTGTGTCA 58.827 43.478 0.00 0.00 0.00 3.58
1996 2051 4.838904 AGGTCCCCTTATAGTTTGTGTC 57.161 45.455 0.00 0.00 0.00 3.67
1997 2052 8.270030 GTTTATAGGTCCCCTTATAGTTTGTGT 58.730 37.037 0.00 0.00 34.61 3.72
1998 2053 7.718314 GGTTTATAGGTCCCCTTATAGTTTGTG 59.282 40.741 0.00 0.00 34.61 3.33
2000 2055 7.808218 TGGTTTATAGGTCCCCTTATAGTTTG 58.192 38.462 0.00 0.00 34.61 2.93
2001 2056 7.073343 CCTGGTTTATAGGTCCCCTTATAGTTT 59.927 40.741 0.00 0.00 34.61 2.66
2002 2057 6.561454 CCTGGTTTATAGGTCCCCTTATAGTT 59.439 42.308 0.00 0.00 34.61 2.24
2003 2058 6.089502 CCTGGTTTATAGGTCCCCTTATAGT 58.910 44.000 0.00 0.00 34.61 2.12
2004 2059 6.212993 GTCCTGGTTTATAGGTCCCCTTATAG 59.787 46.154 0.00 0.00 36.67 1.31
2005 2060 6.086775 GTCCTGGTTTATAGGTCCCCTTATA 58.913 44.000 0.00 0.00 36.67 0.98
2006 2061 4.912133 GTCCTGGTTTATAGGTCCCCTTAT 59.088 45.833 0.00 0.00 36.67 1.73
2008 2063 3.120898 GTCCTGGTTTATAGGTCCCCTT 58.879 50.000 0.00 0.00 36.67 3.95
2009 2064 2.772930 GTCCTGGTTTATAGGTCCCCT 58.227 52.381 0.00 0.00 36.67 4.79
2011 2066 1.415289 CCGTCCTGGTTTATAGGTCCC 59.585 57.143 0.00 0.00 36.67 4.46
2013 2068 2.364647 CCTCCGTCCTGGTTTATAGGTC 59.635 54.545 0.00 0.00 39.52 3.85
2015 2070 2.395619 ACCTCCGTCCTGGTTTATAGG 58.604 52.381 0.00 0.00 39.52 2.57
2018 2073 3.111741 ACTACCTCCGTCCTGGTTTAT 57.888 47.619 0.00 0.00 39.52 1.40
2022 2077 0.998145 AGTACTACCTCCGTCCTGGT 59.002 55.000 0.00 0.00 39.52 4.00
2023 2078 3.072768 AGATAGTACTACCTCCGTCCTGG 59.927 52.174 4.31 0.00 40.09 4.45
2026 2081 7.500559 TCTTTTAAGATAGTACTACCTCCGTCC 59.499 40.741 4.31 0.00 0.00 4.79
2063 2118 9.362539 TCTAAACCGTCTTATAAAAGCTTACAG 57.637 33.333 0.00 0.00 32.36 2.74
2069 2124 9.274065 CACAAATCTAAACCGTCTTATAAAAGC 57.726 33.333 0.00 0.00 32.36 3.51
2077 2132 8.842358 TTTAGATCACAAATCTAAACCGTCTT 57.158 30.769 13.53 0.00 42.40 3.01
2082 2137 8.889717 TCCGATTTTAGATCACAAATCTAAACC 58.110 33.333 19.58 11.53 45.11 3.27
2087 2142 7.119262 ACGTTTCCGATTTTAGATCACAAATCT 59.881 33.333 19.58 0.00 37.28 2.40
2088 2143 7.241376 ACGTTTCCGATTTTAGATCACAAATC 58.759 34.615 15.09 15.09 36.45 2.17
2089 2144 7.141100 ACGTTTCCGATTTTAGATCACAAAT 57.859 32.000 0.00 0.00 37.88 2.32
2110 2165 9.813446 CTCCCTCTGTAAACTTTTATAATACGT 57.187 33.333 0.00 0.00 0.00 3.57
2112 2167 9.609346 TGCTCCCTCTGTAAACTTTTATAATAC 57.391 33.333 0.00 0.00 0.00 1.89
2113 2168 9.832445 CTGCTCCCTCTGTAAACTTTTATAATA 57.168 33.333 0.00 0.00 0.00 0.98
2115 2170 7.686434 ACTGCTCCCTCTGTAAACTTTTATAA 58.314 34.615 0.00 0.00 0.00 0.98
2119 2174 4.439253 ACTGCTCCCTCTGTAAACTTTT 57.561 40.909 0.00 0.00 0.00 2.27
2120 2175 5.071923 AGTTACTGCTCCCTCTGTAAACTTT 59.928 40.000 0.00 0.00 33.98 2.66
2123 2178 4.538746 AGTTACTGCTCCCTCTGTAAAC 57.461 45.455 0.00 0.00 33.98 2.01
2125 2180 6.869206 AAATAGTTACTGCTCCCTCTGTAA 57.131 37.500 0.00 0.00 0.00 2.41
2127 2182 5.013183 ACAAAATAGTTACTGCTCCCTCTGT 59.987 40.000 0.00 0.00 0.00 3.41
2129 2184 5.763876 ACAAAATAGTTACTGCTCCCTCT 57.236 39.130 0.00 0.00 0.00 3.69
2130 2185 6.641474 AGTACAAAATAGTTACTGCTCCCTC 58.359 40.000 0.00 0.00 0.00 4.30
2132 2187 6.641474 AGAGTACAAAATAGTTACTGCTCCC 58.359 40.000 0.00 0.00 0.00 4.30
2133 2188 7.275999 GTGAGAGTACAAAATAGTTACTGCTCC 59.724 40.741 0.00 0.00 0.00 4.70
2134 2189 7.275999 GGTGAGAGTACAAAATAGTTACTGCTC 59.724 40.741 0.00 0.00 0.00 4.26
2136 2191 7.097834 AGGTGAGAGTACAAAATAGTTACTGC 58.902 38.462 0.00 0.00 0.00 4.40
2137 2192 8.524487 AGAGGTGAGAGTACAAAATAGTTACTG 58.476 37.037 0.00 0.00 0.00 2.74
2140 2195 9.924650 GAAAGAGGTGAGAGTACAAAATAGTTA 57.075 33.333 0.00 0.00 0.00 2.24
2145 2200 8.871125 TCTAAGAAAGAGGTGAGAGTACAAAAT 58.129 33.333 0.00 0.00 0.00 1.82
2146 2201 8.246430 TCTAAGAAAGAGGTGAGAGTACAAAA 57.754 34.615 0.00 0.00 0.00 2.44
2168 2223 8.857098 TCTTAAGAACTGCTCAGTAAAACTCTA 58.143 33.333 1.68 0.00 41.58 2.43
2192 2248 8.903820 GGGCATGTTCAGTAGTATTATTTTTCT 58.096 33.333 0.00 0.00 0.00 2.52
2193 2249 7.855904 CGGGCATGTTCAGTAGTATTATTTTTC 59.144 37.037 0.00 0.00 0.00 2.29
2194 2250 7.201785 CCGGGCATGTTCAGTAGTATTATTTTT 60.202 37.037 0.00 0.00 0.00 1.94
2196 2252 5.763204 CCGGGCATGTTCAGTAGTATTATTT 59.237 40.000 0.00 0.00 0.00 1.40
2199 2255 3.707611 ACCGGGCATGTTCAGTAGTATTA 59.292 43.478 6.32 0.00 0.00 0.98
2204 2260 1.086696 CAACCGGGCATGTTCAGTAG 58.913 55.000 6.32 0.00 0.00 2.57
2218 2274 4.989168 ACTACTAAAACTCTGAAGCAACCG 59.011 41.667 0.00 0.00 0.00 4.44
2263 2325 6.127338 CCAATACATGGTCAGAGTTGAGAGTA 60.127 42.308 0.00 0.00 44.85 2.59
2302 2364 3.993081 GCCTCTTGGATTCATATCACTCG 59.007 47.826 0.00 0.00 34.57 4.18
2305 2367 6.373774 CCTAATGCCTCTTGGATTCATATCAC 59.626 42.308 0.00 0.00 34.57 3.06
2315 2377 3.048600 AGTATGCCTAATGCCTCTTGGA 58.951 45.455 0.00 0.00 40.16 3.53
2375 2466 1.306148 AATGCCTGTGCTGATCATCG 58.694 50.000 0.00 0.00 38.71 3.84
2395 2502 0.890542 GTTCAGACCACAGGCATGCA 60.891 55.000 21.36 0.00 0.00 3.96
2396 2503 0.890542 TGTTCAGACCACAGGCATGC 60.891 55.000 9.90 9.90 0.00 4.06
2397 2504 1.608055 TTGTTCAGACCACAGGCATG 58.392 50.000 0.00 0.00 0.00 4.06
2398 2505 2.165167 CATTGTTCAGACCACAGGCAT 58.835 47.619 0.00 0.00 0.00 4.40
2399 2506 1.133823 ACATTGTTCAGACCACAGGCA 60.134 47.619 0.00 0.00 0.00 4.75
2407 2514 1.270550 CAGGGGCAACATTGTTCAGAC 59.729 52.381 0.00 0.00 39.74 3.51
2431 2556 0.392729 GAGTGGCAGAGCAAGAGCAT 60.393 55.000 0.00 0.00 45.49 3.79
2432 2557 1.004080 GAGTGGCAGAGCAAGAGCA 60.004 57.895 0.00 0.00 45.49 4.26
2435 2560 0.607112 CTCAGAGTGGCAGAGCAAGA 59.393 55.000 0.00 0.00 0.00 3.02
2436 2561 0.321021 ACTCAGAGTGGCAGAGCAAG 59.679 55.000 0.91 0.00 33.75 4.01
2437 2562 0.761187 AACTCAGAGTGGCAGAGCAA 59.239 50.000 3.05 0.00 33.75 3.91
2438 2563 0.034476 CAACTCAGAGTGGCAGAGCA 59.966 55.000 3.05 0.00 33.75 4.26
2439 2564 1.297456 GCAACTCAGAGTGGCAGAGC 61.297 60.000 23.33 8.46 44.56 4.09
2440 2565 2.838286 GCAACTCAGAGTGGCAGAG 58.162 57.895 23.33 0.00 44.56 3.35
2452 2577 7.725818 ACAGTAAAAGTTTAGGTAGCAACTC 57.274 36.000 0.00 0.00 31.79 3.01
2453 2578 7.876582 CCTACAGTAAAAGTTTAGGTAGCAACT 59.123 37.037 12.70 0.00 34.09 3.16
2471 2623 3.167485 ACGATTGAACCCACCTACAGTA 58.833 45.455 0.00 0.00 0.00 2.74
2473 2625 2.762535 ACGATTGAACCCACCTACAG 57.237 50.000 0.00 0.00 0.00 2.74
2474 2626 3.142951 CAAACGATTGAACCCACCTACA 58.857 45.455 0.00 0.00 38.94 2.74
2475 2627 2.095415 GCAAACGATTGAACCCACCTAC 60.095 50.000 9.88 0.00 38.94 3.18
2502 2730 2.673368 CACGGTTAATCTGGTTCAGAGC 59.327 50.000 3.94 0.00 44.08 4.09
2530 2758 6.466308 AAAACAGAAAACAGAAAACACTGC 57.534 33.333 0.00 0.00 41.06 4.40
2533 2761 7.114388 ACGAGAAAAACAGAAAACAGAAAACAC 59.886 33.333 0.00 0.00 0.00 3.32
2534 2762 7.142680 ACGAGAAAAACAGAAAACAGAAAACA 58.857 30.769 0.00 0.00 0.00 2.83
2536 2764 7.364200 TGACGAGAAAAACAGAAAACAGAAAA 58.636 30.769 0.00 0.00 0.00 2.29
2537 2765 6.904498 TGACGAGAAAAACAGAAAACAGAAA 58.096 32.000 0.00 0.00 0.00 2.52
2538 2766 6.489127 TGACGAGAAAAACAGAAAACAGAA 57.511 33.333 0.00 0.00 0.00 3.02
2540 2768 6.083630 TGTTGACGAGAAAAACAGAAAACAG 58.916 36.000 0.00 0.00 30.62 3.16
2541 2769 6.003234 TGTTGACGAGAAAAACAGAAAACA 57.997 33.333 0.00 0.00 30.62 2.83
2576 2892 5.586243 TGTTAGTGCTGGATAAATTCAGAGC 59.414 40.000 2.25 0.00 33.83 4.09
2622 2941 2.357952 CCCTGCATCACATTGACATCAG 59.642 50.000 0.00 0.00 0.00 2.90
2625 2944 1.771565 CCCCTGCATCACATTGACAT 58.228 50.000 0.00 0.00 0.00 3.06
2627 2946 0.682209 AGCCCCTGCATCACATTGAC 60.682 55.000 0.00 0.00 41.13 3.18
2763 3082 2.805353 CACTCGAAGCCGTCCACG 60.805 66.667 0.00 0.00 37.05 4.94
3269 3621 1.072331 GCTTGTCCTGAGGTTCTGGAA 59.928 52.381 0.00 0.00 44.44 3.53
3271 3623 0.671781 CGCTTGTCCTGAGGTTCTGG 60.672 60.000 0.00 0.00 36.89 3.86
3290 3642 2.480419 CTGAAATCCCGTGTCTTGTCAC 59.520 50.000 0.00 0.00 35.28 3.67
3455 3813 6.981559 AGAAAATCGAGAAGGCTAATAGTGAC 59.018 38.462 0.00 0.00 0.00 3.67
3459 3817 8.883731 TGAAAAGAAAATCGAGAAGGCTAATAG 58.116 33.333 0.00 0.00 0.00 1.73
3470 3828 4.229876 GGGCAACTGAAAAGAAAATCGAG 58.770 43.478 0.00 0.00 0.00 4.04
3478 3836 3.118482 TGCAAATTGGGCAACTGAAAAGA 60.118 39.130 2.79 0.00 38.54 2.52
3518 3876 1.194547 GGTTACAGACATGTGTGCACG 59.805 52.381 21.99 0.00 40.79 5.34
3549 3907 4.168014 CAGCGATTCTGATCAGCTCTATC 58.832 47.826 18.36 14.88 45.72 2.08
3573 3931 0.944311 GAGCCGACAGAAGCGACAAA 60.944 55.000 0.00 0.00 0.00 2.83
3585 3943 0.737715 CTGTGTTGCTAGGAGCCGAC 60.738 60.000 0.00 0.00 41.51 4.79
3590 3948 2.103042 GCGGCTGTGTTGCTAGGAG 61.103 63.158 0.00 0.00 0.00 3.69
3606 3964 3.932710 TGCTTGACAAAATCCTACTAGCG 59.067 43.478 0.00 0.00 33.61 4.26
3643 4001 4.631377 GCCTTTGTTTGCAGAAGAAAAAGT 59.369 37.500 0.00 0.00 0.00 2.66
3653 4011 0.105408 AAGCTGGCCTTTGTTTGCAG 59.895 50.000 3.32 0.00 0.00 4.41
3743 4112 1.856629 AGTATTTTCGGACGGAGGGA 58.143 50.000 0.00 0.00 0.00 4.20
3744 4113 2.277084 CAAGTATTTTCGGACGGAGGG 58.723 52.381 0.00 0.00 0.00 4.30
3745 4114 2.928116 GACAAGTATTTTCGGACGGAGG 59.072 50.000 0.00 0.00 0.00 4.30
3746 4115 3.581755 TGACAAGTATTTTCGGACGGAG 58.418 45.455 0.00 0.00 0.00 4.63
3747 4116 3.663995 TGACAAGTATTTTCGGACGGA 57.336 42.857 0.00 0.00 0.00 4.69
3748 4117 3.930229 TGATGACAAGTATTTTCGGACGG 59.070 43.478 0.00 0.00 0.00 4.79
3749 4118 5.524511 TTGATGACAAGTATTTTCGGACG 57.475 39.130 0.00 0.00 0.00 4.79
3750 4119 7.273381 CCATTTTGATGACAAGTATTTTCGGAC 59.727 37.037 0.00 0.00 37.32 4.79
3751 4120 7.175816 TCCATTTTGATGACAAGTATTTTCGGA 59.824 33.333 0.00 0.00 37.32 4.55
3752 4121 7.312154 TCCATTTTGATGACAAGTATTTTCGG 58.688 34.615 0.00 0.00 37.32 4.30
3753 4122 8.915871 ATCCATTTTGATGACAAGTATTTTCG 57.084 30.769 0.00 0.00 37.32 3.46
3760 4129 8.096414 CCCTTTTTATCCATTTTGATGACAAGT 58.904 33.333 0.00 0.00 37.32 3.16
3761 4130 8.313292 TCCCTTTTTATCCATTTTGATGACAAG 58.687 33.333 0.00 0.00 37.32 3.16
3762 4131 8.200024 TCCCTTTTTATCCATTTTGATGACAA 57.800 30.769 0.00 0.00 0.00 3.18
3763 4132 7.789202 TCCCTTTTTATCCATTTTGATGACA 57.211 32.000 0.00 0.00 0.00 3.58
3764 4133 8.260114 ACATCCCTTTTTATCCATTTTGATGAC 58.740 33.333 0.00 0.00 32.39 3.06
3765 4134 8.378115 ACATCCCTTTTTATCCATTTTGATGA 57.622 30.769 0.00 0.00 32.39 2.92
3768 4137 9.713684 AGATACATCCCTTTTTATCCATTTTGA 57.286 29.630 0.00 0.00 0.00 2.69
3774 4143 9.225682 AGTTCTAGATACATCCCTTTTTATCCA 57.774 33.333 0.00 0.00 0.00 3.41
3783 4152 9.364653 ACGTATTTTAGTTCTAGATACATCCCT 57.635 33.333 0.00 0.00 0.00 4.20
3784 4153 9.623350 GACGTATTTTAGTTCTAGATACATCCC 57.377 37.037 0.00 0.00 0.00 3.85
3829 4198 9.904198 TCCAGATATACTTGTCATCAAAATGAA 57.096 29.630 0.00 0.00 43.42 2.57
3830 4199 9.330063 GTCCAGATATACTTGTCATCAAAATGA 57.670 33.333 0.00 0.00 39.63 2.57
3831 4200 8.278408 CGTCCAGATATACTTGTCATCAAAATG 58.722 37.037 0.00 0.00 32.87 2.32
3832 4201 7.442364 CCGTCCAGATATACTTGTCATCAAAAT 59.558 37.037 0.00 0.00 32.87 1.82
3833 4202 6.761242 CCGTCCAGATATACTTGTCATCAAAA 59.239 38.462 0.00 0.00 32.87 2.44
3834 4203 6.097696 TCCGTCCAGATATACTTGTCATCAAA 59.902 38.462 0.00 0.00 32.87 2.69
3835 4204 5.596772 TCCGTCCAGATATACTTGTCATCAA 59.403 40.000 0.00 0.00 0.00 2.57
3836 4205 5.137551 TCCGTCCAGATATACTTGTCATCA 58.862 41.667 0.00 0.00 0.00 3.07
3837 4206 5.336055 CCTCCGTCCAGATATACTTGTCATC 60.336 48.000 0.00 0.00 0.00 2.92
3838 4207 4.524714 CCTCCGTCCAGATATACTTGTCAT 59.475 45.833 0.00 0.00 0.00 3.06
3839 4208 3.889538 CCTCCGTCCAGATATACTTGTCA 59.110 47.826 0.00 0.00 0.00 3.58
3840 4209 3.256136 CCCTCCGTCCAGATATACTTGTC 59.744 52.174 0.00 0.00 0.00 3.18
3841 4210 3.117246 TCCCTCCGTCCAGATATACTTGT 60.117 47.826 0.00 0.00 0.00 3.16
3842 4211 3.497332 TCCCTCCGTCCAGATATACTTG 58.503 50.000 0.00 0.00 0.00 3.16
3843 4212 3.140519 ACTCCCTCCGTCCAGATATACTT 59.859 47.826 0.00 0.00 0.00 2.24
3844 4213 2.717515 ACTCCCTCCGTCCAGATATACT 59.282 50.000 0.00 0.00 0.00 2.12
3845 4214 3.157750 ACTCCCTCCGTCCAGATATAC 57.842 52.381 0.00 0.00 0.00 1.47
3846 4215 3.654321 TGTACTCCCTCCGTCCAGATATA 59.346 47.826 0.00 0.00 0.00 0.86
3847 4216 2.445905 TGTACTCCCTCCGTCCAGATAT 59.554 50.000 0.00 0.00 0.00 1.63
3848 4217 1.848388 TGTACTCCCTCCGTCCAGATA 59.152 52.381 0.00 0.00 0.00 1.98
3849 4218 0.629596 TGTACTCCCTCCGTCCAGAT 59.370 55.000 0.00 0.00 0.00 2.90
3850 4219 0.406750 TTGTACTCCCTCCGTCCAGA 59.593 55.000 0.00 0.00 0.00 3.86
3851 4220 1.204941 CTTTGTACTCCCTCCGTCCAG 59.795 57.143 0.00 0.00 0.00 3.86
3852 4221 1.263356 CTTTGTACTCCCTCCGTCCA 58.737 55.000 0.00 0.00 0.00 4.02
3853 4222 0.535797 CCTTTGTACTCCCTCCGTCC 59.464 60.000 0.00 0.00 0.00 4.79
3854 4223 1.553706 TCCTTTGTACTCCCTCCGTC 58.446 55.000 0.00 0.00 0.00 4.79
3855 4224 1.900486 CTTCCTTTGTACTCCCTCCGT 59.100 52.381 0.00 0.00 0.00 4.69
3856 4225 2.094130 GTCTTCCTTTGTACTCCCTCCG 60.094 54.545 0.00 0.00 0.00 4.63
3857 4226 2.904434 TGTCTTCCTTTGTACTCCCTCC 59.096 50.000 0.00 0.00 0.00 4.30
3858 4227 3.617775 GCTGTCTTCCTTTGTACTCCCTC 60.618 52.174 0.00 0.00 0.00 4.30
3859 4228 2.303311 GCTGTCTTCCTTTGTACTCCCT 59.697 50.000 0.00 0.00 0.00 4.20
3860 4229 2.038557 TGCTGTCTTCCTTTGTACTCCC 59.961 50.000 0.00 0.00 0.00 4.30
3861 4230 3.067833 GTGCTGTCTTCCTTTGTACTCC 58.932 50.000 0.00 0.00 0.00 3.85
3862 4231 2.731976 CGTGCTGTCTTCCTTTGTACTC 59.268 50.000 0.00 0.00 0.00 2.59
3863 4232 2.364324 TCGTGCTGTCTTCCTTTGTACT 59.636 45.455 0.00 0.00 0.00 2.73
3864 4233 2.750948 TCGTGCTGTCTTCCTTTGTAC 58.249 47.619 0.00 0.00 0.00 2.90
3865 4234 3.069016 TCTTCGTGCTGTCTTCCTTTGTA 59.931 43.478 0.00 0.00 0.00 2.41
3866 4235 2.158957 TCTTCGTGCTGTCTTCCTTTGT 60.159 45.455 0.00 0.00 0.00 2.83
3867 4236 2.478134 CTCTTCGTGCTGTCTTCCTTTG 59.522 50.000 0.00 0.00 0.00 2.77
3879 4248 1.009389 CCCAAGTCGTCTCTTCGTGC 61.009 60.000 0.00 0.00 0.00 5.34
3894 4263 2.174639 ACATGAAACTGACTGACCCCAA 59.825 45.455 0.00 0.00 0.00 4.12
3923 4295 2.158385 ACGAGGAGATATTCAGGGAGCT 60.158 50.000 0.00 0.00 0.00 4.09
3954 4326 7.865820 TGGGAGTGATCTTAGAGAATGAATTT 58.134 34.615 0.00 0.00 0.00 1.82
3975 4491 6.009589 ACACATCACAAAAGATTACATGGGA 58.990 36.000 0.00 0.00 0.00 4.37
3978 4494 8.578308 ACAAACACATCACAAAAGATTACATG 57.422 30.769 0.00 0.00 0.00 3.21
3992 4508 4.009370 TCGGATACCAACAAACACATCA 57.991 40.909 0.00 0.00 0.00 3.07
4007 4523 6.596621 TCATAAACCCACAATTCATCGGATA 58.403 36.000 0.00 0.00 0.00 2.59
4103 4619 6.270815 CCAAAGTAGACGGATAGATCGAAAA 58.729 40.000 0.00 0.00 0.00 2.29
4105 4621 4.261489 GCCAAAGTAGACGGATAGATCGAA 60.261 45.833 0.00 0.00 0.00 3.71
4152 4669 1.136828 ACCACAAAGCACTACTCCCA 58.863 50.000 0.00 0.00 0.00 4.37
4155 4672 5.479306 TGAATCTACCACAAAGCACTACTC 58.521 41.667 0.00 0.00 0.00 2.59
4157 4674 6.743575 ATTGAATCTACCACAAAGCACTAC 57.256 37.500 0.00 0.00 0.00 2.73
4158 4675 7.759489 AAATTGAATCTACCACAAAGCACTA 57.241 32.000 0.00 0.00 0.00 2.74
4174 4691 3.511146 ACAGGATCACCGCAAAATTGAAT 59.489 39.130 0.00 0.00 41.83 2.57
4200 4717 0.748005 TGCCCTTATCCTTTCTGCGC 60.748 55.000 0.00 0.00 0.00 6.09
4201 4718 1.017387 GTGCCCTTATCCTTTCTGCG 58.983 55.000 0.00 0.00 0.00 5.18


Based at the University of Bristol with support from BBSRC. BBSRC icon Bristol icon

AutoCloner maintained by Alex Coulton.